Carg22282 (gene) Silver-seed gourd

Overview
NameCarg22282
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCycloidea-like protein group 1A
LocationCucurbita_argyrosperma_scaffold_164 : 166823 .. 168293 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCCAAACAAAAAGATACCAAAAAAATGGCATTTTTAATGGGTAGAGAGTTCTTTGAGTTTCATATCACTTCCAAAATCCAAACAAAATGGCATCTTCAAGCTTCAATCTCAACCCTTTCCCTTGCTTTCCTCTTGCATTTCCTTCACTTCTCAACCCTGACCCTTCACCCAACAACCCTACTTTCAACTTCCATCAACCCCATCTAGATCCACTCTCATTTCTTCCTCCCTATTTCCCGATCGCCCACTTCTCGGCATCGGCAACGGGGAACAGTATCCAAGCTCTCGGCGACATCCCGAGTGCTCTTACGGTCGGGATGGGGACGGGGACGAGGACGGGGAAGAAGGATCGACATAGTAAGATTTATACGGCGCAGGGTTTACGGGATCGGAGAGTGAGATTATCCATCGATATAGCTCGAAAGTTCTTTGATTTGCAAGACATGTTAGGGTATGACAAAGCTAGCAAAACCCTAGAGTGGCTTTTTGGTAAATCTAGAAAAGCAATTAAAGAGCTTTCAAGGTCCAAGTATGGAAATGTTGAAGAAAAGGAGGAAGATAGTGAAAAAGTTGAGGTTTTTAATCTTCTTGCTAAAGAATCAAGAGCCAAGGCCCGAGCAAGAGCCAGGGACGACGACGACGACAACGATAAAAAGTATTATGGTCATCGGATGAGCCGCGTCGAGGAAGTTTCAGATCATTGGAGTACTGAAACTTCAAATCTATCAATGGAGGAATACTCTTTCACGAACAAGAGAAGGATTTGTGCTACCAAGTTCATCAGTGACAACGACCACGACAATATGAACCCGTGTCGGGACGACGATGCCGAAGCCTCAAAAGGGTATTTACAAGAACACTCCATGATCAAGAGGAAATGGAAAGCTTCCTCCATTGATGGCATCCCAAGTTATCCCTTTTCCAAGTAATTTCAACCATCAAAGTCTCGAAATTTCTGCTTTTTTTACCCTATAATTTCTGATTTTTCTATGTTTTTTTTGCAGGATTTGAGAGTTTAATGAAAACCCTTTTGAGAAATTAAGGATAAAATGCAGCCAAGAACGTCAAAACATGGCCTTTTTTAGATCATATTATAATAATTAAAGACTGATGATGATGTTTTTTCCTGCTTTATTAAGGTTACTAGATCATGTTTGATTTCCGTCCTTAGTTTATCCGAATATATATTGTCTCTGTCTTATGCCTATCTTCAAATGACAATAGTTTATGGTTCTGGCTGTCAATGGAGGTTGGATTTTGTGAATTTGTTGTCGGGGACATATCAATGTGTGCCAAATTAACGACGAGTTGACGTTGGGAGCATCGAGGAAGAAGTAAACGTTCTTCCTAGGGTTGCTAGATATGTCTTAAAATTACTTCTGTCATGTCCAAAATCACACTTTAGAACGTATTTCATACATTAAAAATCAATTTAATGTTATGAAATGTGAGATCTTATGTCGGTTGGA

mRNA sequence

AATCCAAACAAAAAGATACCAAAAAAATGGCATTTTTAATGGGTAGAGAGTTCTTTGAGTTTCATATCACTTCCAAAATCCAAACAAAATGGCATCTTCAAGCTTCAATCTCAACCCTTTCCCTTGCTTTCCTCTTGCATTTCCTTCACTTCTCAACCCTGACCCTTCACCCAACAACCCTACTTTCAACTTCCATCAACCCCATCTAGATCCACTCTCATTTCTTCCTCCCTATTTCCCGATCGCCCACTTCTCGGCATCGGCAACGGGGAACAGTATCCAAGCTCTCGGCGACATCCCGAGTGCTCTTACGGTCGGGATGGGGACGGGGACGAGGACGGGGAAGAAGGATCGACATAGTAAGATTTATACGGCGCAGGGTTTACGGGATCGGAGAGTGAGATTATCCATCGATATAGCTCGAAAGTTCTTTGATTTGCAAGACATGTTAGGGTATGACAAAGCTAGCAAAACCCTAGAGTGGCTTTTTGGTAAATCTAGAAAAGCAATTAAAGAGCTTTCAAGGTCCAAGTATGGAAATGTTGAAGAAAAGGAGGAAGATAGTGAAAAAGTTGAGGTTTTTAATCTTCTTGCTAAAGAATCAAGAGCCAAGGCCCGAGCAAGAGCCAGGGACGACGACGACGACAACGATAAAAAGTATTATGGTCATCGGATGAGCCGCGTCGAGGAAGTTTCAGATCATTGGAGTACTGAAACTTCAAATCTATCAATGGAGGAATACTCTTTCACGAACAAGAGAAGGATTTGTGCTACCAAGTTCATCAGTGACAACGACCACGACAATATGAACCCGTGTCGGGACGACGATGCCGAAGCCTCAAAAGGGTATTTACAAGAACACTCCATGATCAAGAGGAAATGGAAAGCTTCCTCCATTGATGGCATCCCAAGTTATCCCTTTTCCAAGATTTGAGAGTTTAATGAAAACCCTTTTGAGAAATTAAGGATAAAATGCAGCCAAGAACGTCAAAACATGGCCTTTTTTAGATCATATTATAATAATTAAAGACTGATGATGATGTTTTTTCCTGCTTTATTAAGGTTACTAGATCATGTTTGATTTCCGTCCTTAGTTTATCCGAATATATATTGTCTCTGTCTTATGCCTATCTTCAAATGACAATAGTTTATGGTTCTGGCTGTCAATGGAGGTTGGATTTTGTGAATTTGTTGTCGGGGACATATCAATGTGTGCCAAATTAACGACGAGTTGACGTTGGGAGCATCGAGGAAGAAGTAAACGTTCTTCCTAGGGTTGCTAGATATGTCTTAAAATTACTTCTGTCATGTCCAAAATCACACTTTAGAACGTATTTCATACATTAAAAATCAATTTAATGTTATGAAATGTGAGATCTTATGTCGGTTGGA

Coding sequence (CDS)

ATGGCATCTTCAAGCTTCAATCTCAACCCTTTCCCTTGCTTTCCTCTTGCATTTCCTTCACTTCTCAACCCTGACCCTTCACCCAACAACCCTACTTTCAACTTCCATCAACCCCATCTAGATCCACTCTCATTTCTTCCTCCCTATTTCCCGATCGCCCACTTCTCGGCATCGGCAACGGGGAACAGTATCCAAGCTCTCGGCGACATCCCGAGTGCTCTTACGGTCGGGATGGGGACGGGGACGAGGACGGGGAAGAAGGATCGACATAGTAAGATTTATACGGCGCAGGGTTTACGGGATCGGAGAGTGAGATTATCCATCGATATAGCTCGAAAGTTCTTTGATTTGCAAGACATGTTAGGGTATGACAAAGCTAGCAAAACCCTAGAGTGGCTTTTTGGTAAATCTAGAAAAGCAATTAAAGAGCTTTCAAGGTCCAAGTATGGAAATGTTGAAGAAAAGGAGGAAGATAGTGAAAAAGTTGAGGTTTTTAATCTTCTTGCTAAAGAATCAAGAGCCAAGGCCCGAGCAAGAGCCAGGGACGACGACGACGACAACGATAAAAAGTATTATGGTCATCGGATGAGCCGCGTCGAGGAAGTTTCAGATCATTGGAGTACTGAAACTTCAAATCTATCAATGGAGGAATACTCTTTCACGAACAAGAGAAGGATTTGTGCTACCAAGTTCATCAGTGACAACGACCACGACAATATGAACCCGTGTCGGGACGACGATGCCGAAGCCTCAAAAGGGTATTTACAAGAACACTCCATGATCAAGAGGAAATGGAAAGCTTCCTCCATTGATGGCATCCCAAGTTATCCCTTTTCCAAGATTTGA

Protein sequence

MASSSFNLNPFPCFPLAFPSLLNPDPSPNNPTFNFHQPHLDPLSFLPPYFPIAHFSASATGNSIQALGDIPSALTVGMGTGTRTGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELSRSKYGNVEEKEEDSEKVEVFNLLAKESRAKARARARDDDDDNDKKYYGHRMSRVEEVSDHWSTETSNLSMEEYSFTNKRRICATKFISDNDHDNMNPCRDDDAEASKGYLQEHSMIKRKWKASSIDGIPSYPFSKI
Homology
[Close]
BLAST of Carg22282 vs. NCBI nr
Match: XP_022934583.1 (transcription factor TCP12-like [Cucurbita moschata])

HSP 1 Score: 509.6 bits (1311), Expect = 6.8e-141
Identity = 277/287 (96.52%), Postives = 279/287 (97.21%), Query Frame = 0 

Query: 1   MASSSFNLNPFPCFPLAFPSLLNPDPSPNNPTFNFHQPHLDPLSFLPPYFPIAHFSASAT 60
           MASSSFNLNPFPCFPLAFPSLLNPDPSPNNPTFNFHQPHLDPLSFLPPYFPIAHFSASAT
Sbjct: 1   MASSSFNLNPFPCFPLAFPSLLNPDPSPNNPTFNFHQPHLDPLSFLPPYFPIAHFSASAT 60

Query: 61  GNSIQALGDIPSALTVGMGTGTRTGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDM 120
           GNSIQALGDIPSALTVGMGTGTRTGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDM
Sbjct: 61  GNSIQALGDIPSALTVGMGTGTRTGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDM 120

Query: 121 LGYDKASKTLEWLFGKSRKAIKELSRSKYGNVEEKEEDSEKVEVFNLLAKE------XXX 180
           LGYDKASKTLEWLFGKSRKAIKELSRSKYGNVEEKEEDSEKVEVFNLLAKE      XXX
Sbjct: 121 LGYDKASKTLEWLFGKSRKAIKELSRSKYGNVEEKEEDSEKVEVFNLLAKEXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXKYYGHRMSRVEEVSDHWSTETSNLSMEEYSFTNKRRICATKFISD 240
           XXXXXXXXXXXXXXXKYYGHRMSRVEEVSDHWST+TSNLSMEEYSFTNKRRICATKFI D
Sbjct: 181 XXXXXXXXXXXXXXXKYYGHRMSRVEEVSDHWSTQTSNLSMEEYSFTNKRRICATKFIGD 240

Query: 241 NDHDNMNPCRDDDAEASKGYLQEHSMIKRKWKASSIDGIPSYPFSKI 282
           ND+DNM PCRDDDAEASKGYLQEHSMIKRKWKASSIDGIPSYPFSKI
Sbjct: 241 NDNDNMKPCRDDDAEASKGYLQEHSMIKRKWKASSIDGIPSYPFSKI 287

[Close]
BLAST of Carg22282 vs. NCBI nr
Match: XP_023529034.1 (transcription factor TCP12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 484.6 bits (1246), Expect = 2.3e-133
Identity = 268/283 (94.70%), Postives = 272/283 (96.11%), Query Frame = 0 

Query: 1   MASSSFNLNPFPCFPLAFPSLLNPDPSPNNPTFNFHQPHLDPLSFLPPYFPIAHFSASAT 60
           MASSSFNLNPFPCFPLAFPSLLN DPSPNNPTFNFHQPHLDPLSFLPPYFPIAHFSASAT
Sbjct: 1   MASSSFNLNPFPCFPLAFPSLLNSDPSPNNPTFNFHQPHLDPLSFLPPYFPIAHFSASAT 60

Query: 61  GNSIQALGDIPSALTVGMGTGTRTGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDM 120
           GNS QALGDIPSALTV  GTGTRTGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDM
Sbjct: 61  GNSSQALGDIPSALTV--GTGTRTGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDM 120

Query: 121 LGYDKASKTLEWLFGKSRKAIKELSRSKYGNVEEKEEDSEKVEVFNLLAKE--XXXXXXX 180
           LGYDKASKTLEWLFGKSRKAIKELSRSKYGNVEEKEEDSEKVEVFNLLAKE  XXXXXXX
Sbjct: 121 LGYDKASKTLEWLFGKSRKAIKELSRSKYGNVEEKEEDSEKVEVFNLLAKEXXXXXXXXX 180

Query: 181 XXXXXXXXXXXKYYGHRMSRVEEVSDHWSTETSNLSMEEYSFTNKRRICATKFISDNDHD 240
           XXXXXXXXXXXKYYGHRMS VEEVS+HWSTETSNLSMEEYSFTNKRRICATKF  D+D+D
Sbjct: 181 XXXXXXXXXXXKYYGHRMSGVEEVSEHWSTETSNLSMEEYSFTNKRRICATKFTGDDDND 240

Query: 241 NMNPCRDDDAEASKGYLQEHSMIKRKWKASSIDGIPSYPFSKI 282
           +M PCRDDDAEASKGYLQE SMIKRKWKASSIDGIPSYPFSKI
Sbjct: 241 DMKPCRDDDAEASKGYLQERSMIKRKWKASSIDGIPSYPFSKI 281

[Close]
BLAST of Carg22282 vs. NCBI nr
Match: XP_022983392.1 (transcription factor TCP12-like [Cucurbita maxima])

HSP 1 Score: 482.6 bits (1241), Expect = 8.8e-133
Identity = 265/287 (92.33%), Postives = 272/287 (94.77%), Query Frame = 0 

Query: 1   MASSSFNLNPFPCFPLAFPSLLNPDPSPNNPTFNFHQPHLDPLSFLPPYFPIAHFSASAT 60
           MASSSFNLNPFPCFPLAFPSLLN DPSPNNPTFNF+QPHLDPLSFLPPYFPIAHFSASAT
Sbjct: 1   MASSSFNLNPFPCFPLAFPSLLNHDPSPNNPTFNFNQPHLDPLSFLPPYFPIAHFSASAT 60

Query: 61  GNSIQALGDIPSALTVGMGTGTRTGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDM 120
           GNSIQALGDIPSALTVG GTGTR GKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDM
Sbjct: 61  GNSIQALGDIPSALTVGTGTGTRMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDM 120

Query: 121 LGYDKASKTLEWLFGKSRKAIKELSRSKYGNVEEKEEDSEKVEVFNLLAKE------XXX 180
           LGYDKASKTLEWLFGKSRKAIKELSRSKYGNVE+KEEDSEKVEVFNLLAKE      XXX
Sbjct: 121 LGYDKASKTLEWLFGKSRKAIKELSRSKYGNVEDKEEDSEKVEVFNLLAKEXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXKYYGHRMSRVEEVSDHWSTETSNLSMEEYSFTNKRRICATKFISD 240
           XXXXXXXXXXXXXXXKYYGH+MS VEEVSDHWSTETSNLSMEEYSF NKRRICA KFI  
Sbjct: 181 XXXXXXXXXXXXXXXKYYGHQMSHVEEVSDHWSTETSNLSMEEYSFMNKRRICAIKFIGG 240

Query: 241 NDHDNMNPCRDDDAEASKGYLQEHSMIKRKWKASSIDGIPSYPFSKI 282
           +D++NM PCRDDDAEASKG+LQEHSMIKRKWKASSIDGIPSYPFSKI
Sbjct: 241 DDNENMKPCRDDDAEASKGHLQEHSMIKRKWKASSIDGIPSYPFSKI 287

[Close]
BLAST of Carg22282 vs. NCBI nr
Match: XP_023521549.1 (transcription factor DICHOTOMA-like [Cucurbita pepo subsp. pepo] >XP_023524593.1 transcription factor DICHOTOMA-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 285.0 bits (728), Expect = 2.7e-73
Identity = 187/351 (53.28%), Postives = 205/351 (58.40%), Query Frame = 0 

Query: 1   MASSSFNLNPFPCF----------PLAFPSLLNPDPSPNNPTFNFHQPHLDPLSFLPPYF 60
           M SSS+NLNPFP F          PL+ PSLLN +PSP   TFNFHQPH DP+SFL PYF
Sbjct: 1   MGSSSYNLNPFPYFPSSSTASYNLPLSIPSLLNSEPSPT--TFNFHQPHQDPVSFLAPYF 60

Query: 61  PIAHFSASAT----------GNSIQALGDIPSALTVGMGTGTRTGKKDRHSKIYTAQGLR 120
           PI HFS S T          G+++QA G+IPSA    MG     GKKDRHSKIYTAQGLR
Sbjct: 61  PIGHFSTSTTPEAVINFAVAGSNVQAFGNIPSAPGARMG----MGKKDRHSKIYTAQGLR 120

Query: 121 DRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELSRSKYGN--------- 180
           DRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLF KS+KAIKELSR+KYGN         
Sbjct: 121 DRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRTKYGNFEVVGGARR 180

Query: 181 ------VEEKEEDSEKVEVFNLLAKEXXXXXXXXXXXXXXXXXXKYYGHRMSRVEEVSDH 240
                 VEE+EE + KVEVFNLLAK+                  +             D 
Sbjct: 181 MSLASDVEEEEEMTNKVEVFNLLAKQ---------SRAKAKDKKRVXXXXXXXXXGKIDI 240

Query: 241 WSTETSNLSMEEYSFTNKRRICATKFISDNDHDNMNPCRDDDAE-----------ASKGY 281
              ETSNLSMEE SF NKR++ A KFI D   D M  CRD+DAE           ASKGY
Sbjct: 241 HGGETSNLSMEESSFMNKRKLYAKKFIED---DEMKSCRDNDAEASQWKLLDQMKASKGY 300

[Close]
BLAST of Carg22282 vs. NCBI nr
Match: XP_008461599.2 (PREDICTED: transcription factor TCP1 [Cucumis melo])

HSP 1 Score: 269.6 bits (688), Expect = 1.2e-68
Identity = 190/347 (54.76%), Postives = 211/347 (60.81%), Query Frame = 0 

Query: 1   MASSSFNLNPFPCF-------------PLAFPSLLNPDPSPNN-PTFNF-HQPHLDPLSF 60
           M SSS+N NPFPCF             PL+ PSLLN DPS NN  T NF HQPH DPLSF
Sbjct: 1   MGSSSYNPNPFPCFPSSSSSTTNSYNLPLSIPSLLNFDPSSNNTSTVNFHHQPHQDPLSF 60

Query: 61  LPPYFPIAHFSA-----------SATGNSIQALGDIPSALTVGMGTGTRTGKKDRHSKIY 120
           L PYFPIAHFS            +  GN+IQALGD+      G GT T  GKKDRHSKIY
Sbjct: 61  LAPYFPIAHFSTLTPPETAVINFAVAGNNIQALGDMVVPSAPGAGT-TGMGKKDRHSKIY 120

Query: 121 TAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELSRSK------ 180
           TAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLF KSRKAIKELSR+K      
Sbjct: 121 TAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSRKAIKELSRTKNVGFHG 180

Query: 181 ----------YGNVEEKEED---------------------SEKVEVFNLLAKE----XX 240
                       +VEE+ +D                      EKVE+FNL+AKE    XX
Sbjct: 181 GAKKLSLAAASSDVEEEYDDDKGWELKMKSMLRIDEQEKVSKEKVEIFNLVAKESRXXXX 240

Query: 241 XXXXXXXXXXXXXXXXKYYGHRMSRVEEVSDHW------STETSNLSMEEYSFTNKRRIC 273
           XXXXXXXX        K YGH+    +EVSDHW      STETSNLSMEE SF NKR+I 
Sbjct: 241 XXXXXXXXEKKQVDDSKVYGHQKGGAQEVSDHWSKHLNHSTETSNLSMEESSFMNKRKIY 300

[Close]
BLAST of Carg22282 vs. TAIR10
Match: AT1G67260.1 (TCP family transcription factor )

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-22
Identity = 54/73 (73.97%), Postives = 63/73 (86.30%), Query Frame = 0 

Query: 86  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELS 145
           KKDRHSKI TAQG+RDRRVRLSI IAR+FFDLQDMLG+DKASKTL+WL  KSRKAIKE+ 
Sbjct: 87  KKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAIKEVV 146

Query: 146 RSKYGNVEEKEED 159
           ++K  N+   +ED
Sbjct: 147 QAK--NLNNDDED 157

[Close]
BLAST of Carg22282 vs. TAIR10
Match: AT1G68800.1 (TCP domain protein 12)

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-20
Identity = 46/59 (77.97%), Postives = 54/59 (91.53%), Query Frame = 0 

Query: 86  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKEL 145
           K+DRHSKI TAQG RDRR+RLS+ IARKFFDLQDMLG+DKASKT+EWLF KS+ +IK+L
Sbjct: 112 KRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSKTSIKQL 170

[Close]
BLAST of Carg22282 vs. TAIR10
Match: AT3G18550.1 (TCP family transcription factor )

HSP 1 Score: 79.3 bits (194), Expect = 4.1e-15
Identity = 41/88 (46.59%), Postives = 60/88 (68.18%), Query Frame = 0 

Query: 58  SATGNSIQALGDIPSALTVGMGTGTRTGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDL 117
           S T N I+    I ++    M    +  + DRHSKI TA+G RDRR+RLS+D+A++ F L
Sbjct: 120 SETINLIEDSQRISTSQDPKMKKAKKPSRTDRHSKIKTAKGTRDRRMRLSLDVAKELFGL 179

Query: 118 QDMLGYDKASKTLEWLFGKSRKAIKELS 146
           QDMLG+DKASKT+EWL  +++  I +++
Sbjct: 180 QDMLGFDKASKTVEWLLTQAKPEIIKIA 207

[Close]
BLAST of Carg22282 vs. TAIR10
Match: AT1G53230.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3)

HSP 1 Score: 77.0 bits (188), Expect = 2.0e-14
Identity = 42/101 (41.58%), Postives = 62/101 (61.39%), Query Frame = 0 

Query: 47  PPYFPIAHF-SASATGNSIQALGDIPSALTVGMGTGTRTGKKDRHSKIYTAQGLRDRRVR 106
           PP   + H  SA+  G     + ++     V       TG+KDRHSK+ TA+G RDRRVR
Sbjct: 14  PPLLEMRHHQSATENGGGCGEIVEVQGGHIV-----RSTGRKDRHSKVCTAKGPRDRRVR 73

Query: 107 LSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELSR 147
           LS   A +F+D+QD LG+D+ SK ++WL  K++ AI +L++
Sbjct: 74  LSAPTAIQFYDVQDRLGFDRPSKAVDWLITKAKSAIDDLAQ 109

[Close]
BLAST of Carg22282 vs. TAIR10
Match: AT2G31070.1 (TCP domain protein 10)

HSP 1 Score: 77.0 bits (188), Expect = 2.0e-14
Identity = 36/74 (48.65%), Postives = 53/74 (71.62%), Query Frame = 0 

Query: 84  TGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKE 143
           TG+KDRHSK++T++G RDRRVRLS   A +F+D+QD LGYD+ SK ++WL  K++ AI +
Sbjct: 27  TGRKDRHSKVFTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKTAIDK 86

Query: 144 LSRSKYGNVEEKEE 158
           L   +      ++E
Sbjct: 87  LELGETTTTTTRQE 100

[Close]
BLAST of Carg22282 vs. Swiss-Prot
Match: sp|Q9FYG7|TCP1_ARATH (Transcription factor TCP1 OS=Arabidopsis thaliana OX=3702 GN=TCP1 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.1e-21
Identity = 54/73 (73.97%), Postives = 63/73 (86.30%), Query Frame = 0 

Query: 86  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELS 145
           KKDRHSKI TAQG+RDRRVRLSI IAR+FFDLQDMLG+DKASKTL+WL  KSRKAIKE+ 
Sbjct: 87  KKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAIKEVV 146

Query: 146 RSKYGNVEEKEED 159
           ++K  N+   +ED
Sbjct: 147 QAK--NLNNDDED 157

[Close]
BLAST of Carg22282 vs. Swiss-Prot
Match: sp|O49250|CYCLD_ANTMA (Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 6.9e-20
Identity = 54/79 (68.35%), Postives = 62/79 (78.48%), Query Frame = 0 

Query: 86  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKEL- 145
           KKDRHSKIYT+QG RDRRVRLSI IARKFFDLQ+MLG+DK SKTL+WL  KS+ AIKEL 
Sbjct: 87  KKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKELV 146

Query: 146 -SRSKYGNVEEKEEDSEKV 163
            S+S   N     +D E+V
Sbjct: 147 QSKSTKSNSSSPCDDCEEV 165

[Close]
BLAST of Carg22282 vs. Swiss-Prot
Match: sp|Q9SBV6|CYCLD_ANTML (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. linkianum OX=102601 GN=CYC PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 6.9e-20
Identity = 54/79 (68.35%), Postives = 62/79 (78.48%), Query Frame = 0 

Query: 86  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKEL- 145
           KKDRHSKIYT+QG RDRRVRLSI IARKFFDLQ+MLG+DK SKTL+WL  KS+ AIKEL 
Sbjct: 79  KKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKELV 138

Query: 146 -SRSKYGNVEEKEEDSEKV 163
            S+S   N     +D E+V
Sbjct: 139 QSKSTKSNSSSPCDDCEEV 157

[Close]
BLAST of Carg22282 vs. Swiss-Prot
Match: sp|Q9SBV9|CYCLD_ANTMH (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. cirrhigerum OX=102600 GN=CYC PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.0e-20
Identity = 53/79 (67.09%), Postives = 62/79 (78.48%), Query Frame = 0 

Query: 86  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKEL- 145
           KKDRHSKIYT+QG RDRRVRLSI IARKFFDLQ+MLG+DK SKTL+WL  KS+ A+KEL 
Sbjct: 79  KKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAVKELV 138

Query: 146 -SRSKYGNVEEKEEDSEKV 163
            S+S   N     +D E+V
Sbjct: 139 QSKSTKSNSSSPCDDCEEV 157

[Close]
BLAST of Carg22282 vs. Swiss-Prot
Match: sp|A0AQW4|TCP12_ARATH (Transcription factor TCP12 OS=Arabidopsis thaliana OX=3702 GN=TCP12 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.0e-19
Identity = 46/59 (77.97%), Postives = 54/59 (91.53%), Query Frame = 0 

Query: 86  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKEL 145
           K+DRHSKI TAQG RDRR+RLS+ IARKFFDLQDMLG+DKASKT+EWLF KS+ +IK+L
Sbjct: 112 KRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSKTSIKQL 170

[Close]
BLAST of Carg22282 vs. TrEMBL
Match: tr|A0A1S3CGD1|A0A1S3CGD1_CUCME (transcription factor TCP1 OS=Cucumis melo OX=3656 GN=LOC103500163 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 7.8e-69
Identity = 190/347 (54.76%), Postives = 211/347 (60.81%), Query Frame = 0 

Query: 1   MASSSFNLNPFPCF-------------PLAFPSLLNPDPSPNN-PTFNF-HQPHLDPLSF 60
           M SSS+N NPFPCF             PL+ PSLLN DPS NN  T NF HQPH DPLSF
Sbjct: 1   MGSSSYNPNPFPCFPSSSSSTTNSYNLPLSIPSLLNFDPSSNNTSTVNFHHQPHQDPLSF 60

Query: 61  LPPYFPIAHFSA-----------SATGNSIQALGDIPSALTVGMGTGTRTGKKDRHSKIY 120
           L PYFPIAHFS            +  GN+IQALGD+      G GT T  GKKDRHSKIY
Sbjct: 61  LAPYFPIAHFSTLTPPETAVINFAVAGNNIQALGDMVVPSAPGAGT-TGMGKKDRHSKIY 120

Query: 121 TAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELSRSK------ 180
           TAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLF KSRKAIKELSR+K      
Sbjct: 121 TAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSRKAIKELSRTKNVGFHG 180

Query: 181 ----------YGNVEEKEED---------------------SEKVEVFNLLAKE----XX 240
                       +VEE+ +D                      EKVE+FNL+AKE    XX
Sbjct: 181 GAKKLSLAAASSDVEEEYDDDKGWELKMKSMLRIDEQEKVSKEKVEIFNLVAKESRXXXX 240

Query: 241 XXXXXXXXXXXXXXXXKYYGHRMSRVEEVSDHW------STETSNLSMEEYSFTNKRRIC 273
           XXXXXXXX        K YGH+    +EVSDHW      STETSNLSMEE SF NKR+I 
Sbjct: 241 XXXXXXXXEKKQVDDSKVYGHQKGGAQEVSDHWSKHLNHSTETSNLSMEESSFMNKRKIY 300

[Close]
BLAST of Carg22282 vs. TrEMBL
Match: tr|A0A0A0LCE8|A0A0A0LCE8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G265270 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 9.6e-43
Identity = 138/255 (54.12%), Postives = 157/255 (61.57%), Query Frame = 0 

Query: 70  IPSALTVGMGTGTRTGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKT 129
           IPSA   G GT T  GKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKT
Sbjct: 3   IPSA--PGAGT-TGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKT 62

Query: 130 LEWLFGKSRKAIKELSRSKYGN------------------VEEKEED------------- 189
           LEWLF KS+KAIKELSR+K GN                  VEE+ +D             
Sbjct: 63  LEWLFSKSKKAIKELSRTKSGNLGVHGGAKKFSLVADSSDVEEEYDDDKEGWELKMKSML 122

Query: 190 ---------SEKVEVFNLLAKE----XXXXXXXXXXXXXXXXXXKYYGHRMSRVEEVSDH 249
                     EKVE FNLLAKE    XXXXXXXXXX        K YGH+    +EVS+H
Sbjct: 123 SIDEQEKVSKEKVEGFNLLAKESRAXXXXXXXXXXXEKKQVDNRKVYGHQKGGAQEVSNH 182

Query: 250 W------STETSNLSMEEYSFTNKRRIC-ATKFISDNDHDNMNPCRDDDAEAS-KGYLQE 273
           W      STETSNLSMEE SF NKR+I  + KFI+ +++ + +   D++AE S +  L +
Sbjct: 183 WSKHLNHSTETSNLSMEESSFINKRKIIYSKKFINHDNYSDKSRRDDENAETSQRKLLDQ 242

[Close]
BLAST of Carg22282 vs. TrEMBL
Match: tr|Q84N90|Q84N90_9FABA (LEGCYC1B OS=Cadia purpurea OX=53844 PE=4 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 4.5e-24
Identity = 78/155 (50.32%), Postives = 96/155 (61.94%), Query Frame = 0 

Query: 11  FPCFPLAFPSLLNPDPSPNNPTFNFHQPHLDPLSFLPPYFPIAHFSASATGNSIQALGD- 70
           + CFP +    L P  +P N + +    H DPL+   PY P  H +      +  A+ D 
Sbjct: 12  YRCFPSSSSYPLFPFFNPENASSSNTSLH-DPLAV--PYIPTHHNTPIPETLTNLAVSDD 71

Query: 71  -----IPSALTVGMGTG------TRTGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQ 130
                +P   T G   G       +  KKDRHSKIYT+QGLRDRRVRLSI+IARKFFDLQ
Sbjct: 72  CGAASMPKQDTSGAHYGLSCLLTKKPAKKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQ 131

Query: 131 DMLGYDKASKTLEWLFGKSRKAIKELSRSKYGNVE 154
           DMLG+DKAS TLEWLF KS+KAIK+L+RSK+ N E
Sbjct: 132 DMLGFDKASNTLEWLFNKSKKAIKDLARSKHSNSE 163

[Close]
BLAST of Carg22282 vs. TrEMBL
Match: tr|A0A1J7HLL1|A0A1J7HLL1_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_11956 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.3e-23
Identity = 77/164 (46.95%), Postives = 99/164 (60.37%), Query Frame = 0 

Query: 3   SSSFNLNPFPCFPLAFPS-----LLNPDPSPNNPTFNFHQPHLDPLSFLPPYFPIAHFSA 62
           S+  +  P+P FP +  S       NP+ + +N TF+      DP SF P   P  H   
Sbjct: 4   STYISSGPYPYFPSSSSSYHPFAFFNPENASSNNTFSH-----DPFSF-PYNMPNTHHYH 63

Query: 63  SATGNSIQALGD--IPSALTVGMGTGTRTG-----------KKDRHSKIYTAQGLRDRRV 122
           +    ++    D  + +A+     +G+  G           KKDRHSKIYT+QGLRDRRV
Sbjct: 64  APNPETVANFADCGVSAAMFKNDVSGSNFGFSNFMAKKPAPKKDRHSKIYTSQGLRDRRV 123

Query: 123 RLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELSRSK 149
           RLSI+IARKFFDLQDMLG+DKAS TLEWLF KS+KA+KEL+RSK
Sbjct: 124 RLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKKAMKELARSK 161

[Close]
BLAST of Carg22282 vs. TrEMBL
Match: tr|A0A1S3TU29|A0A1S3TU29_VIGRR (transcription factor DICHOTOMA-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106758783 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.2e-23
Identity = 80/178 (44.94%), Postives = 112/178 (62.92%), Query Frame = 0 

Query: 3   SSSFNLNPFPCFPLAFPSLLNPDPSPNNPTFNFHQPHLDPLS--FLPPYF------PIAH 62
           SSS + +P+P F     + L+P+ S  + TF  H    DPLS  F+P  +       +A+
Sbjct: 18  SSSSSASPYPSF-----TFLHPENSSASTTF-LH----DPLSVTFIPTNYHAPIPETLAN 77

Query: 63  FSASATGNSIQALGDIPSAL-TVGMGTGTRTGKKDRHSKIYTAQGLRDRRVRLSIDIARK 122
           ++ +    +     D+  AL  +      +T KKDRHSKI+T+QGLRDRRVRLSI+IARK
Sbjct: 78  WAVADCATAAMLNQDLGGALYGITKKPAKKTAKKDRHSKIHTSQGLRDRRVRLSIEIARK 137

Query: 123 FFDLQDMLGYDKASKTLEWLFGKSRKAIKELSRSKYGNVEEKEEDSEKVEVFNLLAKE 172
           FFDLQDMLG+DKAS TL+WLF KS+KAIKEL+RSK+     +   S   EV +++ ++
Sbjct: 138 FFDLQDMLGFDKASNTLDWLFTKSKKAIKELTRSKHSADSFEFSSSSDGEVVSVIHQD 185

The following BLAST results are available for this feature:
BLAST of Carg22282 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022934583.16.8e-14196.52transcription factor TCP12-like [Cucurbita moschata][more]
XP_023529034.12.3e-13394.70transcription factor TCP12-like [Cucurbita pepo subsp. pepo][more]
XP_022983392.18.8e-13392.33transcription factor TCP12-like [Cucurbita maxima][more]
XP_023521549.12.7e-7353.28transcription factor DICHOTOMA-like [Cucurbita pepo subsp. pepo] >XP_023524593.1... [more]
XP_008461599.21.2e-6854.76PREDICTED: transcription factor TCP1 [Cucumis melo][more]
BLAST of Carg22282 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G67260.11.2e-2273.97TCP family transcription factor [more]
AT1G68800.11.1e-2077.97TCP domain protein 12[more]
AT3G18550.14.1e-1546.59TCP family transcription factor [more]
AT1G53230.12.0e-1441.58TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3[more]
AT2G31070.12.0e-1448.65TCP domain protein 10[more]
BLAST of Carg22282 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FYG7|TCP1_ARATH2.1e-2173.97Transcription factor TCP1 OS=Arabidopsis thaliana OX=3702 GN=TCP1 PE=1 SV=1[more]
sp|O49250|CYCLD_ANTMA6.9e-2068.35Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1[more]
sp|Q9SBV6|CYCLD_ANTML6.9e-2068.35Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. linkianum ... [more]
sp|Q9SBV9|CYCLD_ANTMH9.0e-2067.09Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. cirrhigeru... [more]
sp|A0AQW4|TCP12_ARATH2.0e-1977.97Transcription factor TCP12 OS=Arabidopsis thaliana OX=3702 GN=TCP12 PE=2 SV=1[more]
BLAST of Carg22282 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CGD1|A0A1S3CGD1_CUCME7.8e-6954.76transcription factor TCP1 OS=Cucumis melo OX=3656 GN=LOC103500163 PE=4 SV=1[more]
tr|A0A0A0LCE8|A0A0A0LCE8_CUCSA9.6e-4354.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G265270 PE=4 SV=1[more]
tr|Q84N90|Q84N90_9FABA4.5e-2450.32LEGCYC1B OS=Cadia purpurea OX=53844 PE=4 SV=2[more]
tr|A0A1J7HLL1|A0A1J7HLL1_LUPAN1.3e-2346.95Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_11956 PE=4 S... [more]
tr|A0A1S3TU29|A0A1S3TU29_VIGRR2.2e-2344.94transcription factor DICHOTOMA-like OS=Vigna radiata var. radiata OX=3916 GN=LOC... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR017888CYC/TB1_R_domain
IPR017887TF_TCP_subgr
IPR005333Transcription_factor_TCP
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg22282-RACarg22282-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005333Transcription factor, TCPPFAMPF03634TCPcoord: 84..152
e-value: 1.9E-34
score: 119.4
NoneNo IPR availablePANTHERPTHR31072:SF18SUBFAMILY NOT NAMEDcoord: 3..159
NoneNo IPR availablePANTHERPTHR31072FAMILY NOT NAMEDcoord: 3..159
IPR017887Transcription factor TCP subgroupPROSITEPS51369TCPcoord: 86..144
score: 35.216
IPR017888CYC/TB1, R domainPROSITEPS51370Rcoord: 170..189
score: 8.551