CmoCh01G004170 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh01G004170
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCycloidea-like protein group 1A
LocationCmo_Chr01 : 2034189 .. 2035199 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCTTCAAGCTATAATCTCAACCCTTTTCCTTACTTTCCTTCTTCTTCCACTGCTTCCTATAATCTCCCTCTCTCAATTCCTTCACTTCTCAACTCTGAGCCATCACCCACAACTTTCAATTTCCATCAACCCCACCAAGATCCTGTCTCTTTTTTGGCTCCCTATTTTCCCATTGGCCACTTCTCGACGTCCACAACACCGGAGGCGGTGATCAATTTTGCGGTGGCGGGGAGCAACGTTCAAGCTTTTGGCAACATTCCGAGCGCTCCTGGGGCGAGAATGGGGACGGGGAAGAAGGACCGACATAGCAAGATTTACACGGCTCAGGGTTTACGGGATCGGAGAGTGAGATTATCCATTGACATAGCTCGTAAGTTCTTTGATTTGCAAGACATGTTAGGGTATGACAAAGCAAGCAAAACCCTAGAGTGGCTTTTTAGCAAATCCAAAAAAGCAATTAAAGAGCTTTCAAGGACCAAATATGGAAATTTTGAGGTTGTTGGAGGAGCTAGAAGAATGTCTTTGGCTTCAGATGTTGAAGAAGAAGAGGAAATGACTAATAAAGTTGAAGTTTTTAATCTTCTTGCTAAACAATCAAGAGCCAAGGCTAAGGAGAAGAAGCGAGTGGATGATGAAAACGGTGACGACGACGACGACAACGACGGGAAAATCGACGTTCATGGCGGTGAAACTTCAAATCTATCAATGGAGGAATCCTCGTTCATGAACAAGAGAAAACTTTATGCGAAAAAGTTCATCGAGGACGATGAGATGAAATTGTGCCGAGATAACAACGCCGAAGCCTCTCAATGGAAGCTTTTGGATCAAATGAAGGCCTCAAAAGGGTATTTCCAAGAACCCTCCATGATCAAGAGGAAATGGAAGCCTTCCATTATTTCTGGTTCTTCACAGAGAAATCTCCTAATTTCCATTGATGGGATTCCTATAAACTTAACTCAAAATTGGGAGGGCAATAGCAACCCCAATTATCCATTTCCCAAGTAA

mRNA sequence

ATGGGTTCTTCAAGCTATAATCTCAACCCTTTTCCTTACTTTCCTTCTTCTTCCACTGCTTCCTATAATCTCCCTCTCTCAATTCCTTCACTTCTCAACTCTGAGCCATCACCCACAACTTTCAATTTCCATCAACCCCACCAAGATCCTGTCTCTTTTTTGGCTCCCTATTTTCCCATTGGCCACTTCTCGACGTCCACAACACCGGAGGCGGTGATCAATTTTGCGGTGGCGGGGAGCAACGTTCAAGCTTTTGGCAACATTCCGAGCGCTCCTGGGGCGAGAATGGGGACGGGGAAGAAGGACCGACATAGCAAGATTTACACGGCTCAGGGTTTACGGGATCGGAGAGTGAGATTATCCATTGACATAGCTCGTAAGTTCTTTGATTTGCAAGACATGTTAGGGTATGACAAAGCAAGCAAAACCCTAGAGTGGCTTTTTAGCAAATCCAAAAAAGCAATTAAAGAGCTTTCAAGGACCAAATATGGAAATTTTGAGGTTGTTGGAGGAGCTAGAAGAATGTCTTTGGCTTCAGATGTTGAAGAAGAAGAGGAAATGACTAATAAAGTTGAAGTTTTTAATCTTCTTGCTAAACAATCAAGAGCCAAGGCTAAGGAGAAGAAGCGAGTGGATGATGAAAACGGTGACGACGACGACGACAACGACGGGAAAATCGACGTTCATGGCGGTGAAACTTCAAATCTATCAATGGAGGAATCCTCGTTCATGAACAAGAGAAAACTTTATGCGAAAAAGTTCATCGAGGACGATGAGATGAAATTGTGCCGAGATAACAACGCCGAAGCCTCTCAATGGAAGCTTTTGGATCAAATGAAGGCCTCAAAAGGGTATTTCCAAGAACCCTCCATGATCAAGAGGAAATGGAAGCCTTCCATTATTTCTGGTTCTTCACAGAGAAATCTCCTAATTTCCATTGATGGGATTCCTATAAACTTAACTCAAAATTGGGAGGGCAATAGCAACCCCAATTATCCATTTCCCAAGTAA

Coding sequence (CDS)

ATGGGTTCTTCAAGCTATAATCTCAACCCTTTTCCTTACTTTCCTTCTTCTTCCACTGCTTCCTATAATCTCCCTCTCTCAATTCCTTCACTTCTCAACTCTGAGCCATCACCCACAACTTTCAATTTCCATCAACCCCACCAAGATCCTGTCTCTTTTTTGGCTCCCTATTTTCCCATTGGCCACTTCTCGACGTCCACAACACCGGAGGCGGTGATCAATTTTGCGGTGGCGGGGAGCAACGTTCAAGCTTTTGGCAACATTCCGAGCGCTCCTGGGGCGAGAATGGGGACGGGGAAGAAGGACCGACATAGCAAGATTTACACGGCTCAGGGTTTACGGGATCGGAGAGTGAGATTATCCATTGACATAGCTCGTAAGTTCTTTGATTTGCAAGACATGTTAGGGTATGACAAAGCAAGCAAAACCCTAGAGTGGCTTTTTAGCAAATCCAAAAAAGCAATTAAAGAGCTTTCAAGGACCAAATATGGAAATTTTGAGGTTGTTGGAGGAGCTAGAAGAATGTCTTTGGCTTCAGATGTTGAAGAAGAAGAGGAAATGACTAATAAAGTTGAAGTTTTTAATCTTCTTGCTAAACAATCAAGAGCCAAGGCTAAGGAGAAGAAGCGAGTGGATGATGAAAACGGTGACGACGACGACGACAACGACGGGAAAATCGACGTTCATGGCGGTGAAACTTCAAATCTATCAATGGAGGAATCCTCGTTCATGAACAAGAGAAAACTTTATGCGAAAAAGTTCATCGAGGACGATGAGATGAAATTGTGCCGAGATAACAACGCCGAAGCCTCTCAATGGAAGCTTTTGGATCAAATGAAGGCCTCAAAAGGGTATTTCCAAGAACCCTCCATGATCAAGAGGAAATGGAAGCCTTCCATTATTTCTGGTTCTTCACAGAGAAATCTCCTAATTTCCATTGATGGGATTCCTATAAACTTAACTCAAAATTGGGAGGGCAATAGCAACCCCAATTATCCATTTCCCAAGTAA
Homology
[Close]
BLAST of CmoCh01G004170 vs. Swiss-Prot
Match: TCP12_ARATH (Transcription factor TCP12 OS=Arabidopsis thaliana GN=TCP12 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 7.3e-21
Identity = 60/119 (50.42%), Postives = 78/119 (65.55%), Query Frame = 1 

Query: 100 KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELS 159
           K+DRHSKI TAQG RDRR+RLS+ IARKFFDLQDMLG+DKASKT+EWLFSKSK +IK+L 
Sbjct: 112 KRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSKTSIKQLK 171

Query: 160 RTKYGNFEVVGGARRMSLASDVEEEEE--------MTNKVEVFNLLAKQSRAKAKEKKR 211
                +    GG +   L  D +E++E           K    +   K+SR +A+++ R
Sbjct: 172 ERVAAS---EGGGKDEHLQVDEKEKDETLKLRVSKRRTKTMESSFKTKESRERARKRAR 227

[Close]
BLAST of CmoCh01G004170 vs. Swiss-Prot
Match: CYCLD_ANTML (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. linkianum GN=CYC PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.6e-20
Identity = 70/171 (40.94%), Postives = 91/171 (53.22%), Query Frame = 1 

Query: 61  GHFSTSTTPEAVINFAVAGSN-------VQAFGNIPSAPGARMGTGKKDRHSKIYTAQGL 120
           GH+ T+     + + A+  +N       V      PS         KKDRHSKIYT+QG 
Sbjct: 33  GHYLTTANAPVLESTALFNNNNNFNHDVVNGLNRDPSPTFPTKQAVKKDRHSKIYTSQGP 92

Query: 121 RDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRTKYGNF------- 180
           RDRRVRLSI IARKFFDLQ+MLG+DK SKTL+WL +KSK AIKEL ++K           
Sbjct: 93  RDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKELVQSKSTKSNSSSPCD 152

Query: 181 ---EVVG----GARRMSLASDVEEEEEMTNKVEVFNLLAKQSRAKAKEKKR 211
              EVV          S    ++   +    ++     AK+SRAKA+ + R
Sbjct: 153 DCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDSHQAAAKESRAKARARAR 203

[Close]
BLAST of CmoCh01G004170 vs. Swiss-Prot
Match: CYCLD_ANTMA (Transcription factor CYCLOIDEA OS=Antirrhinum majus GN=CYC PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.6e-20
Identity = 70/171 (40.94%), Postives = 91/171 (53.22%), Query Frame = 1 

Query: 61  GHFSTSTTPEAVINFAVAGSN-------VQAFGNIPSAPGARMGTGKKDRHSKIYTAQGL 120
           GH+ T+     + + A+  +N       V      PS         KKDRHSKIYT+QG 
Sbjct: 41  GHYLTTANAPVLESTALFNNNNNFNHDVVNGLNRDPSPTFPTKQAVKKDRHSKIYTSQGP 100

Query: 121 RDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRTKYGNF------- 180
           RDRRVRLSI IARKFFDLQ+MLG+DK SKTL+WL +KSK AIKEL ++K           
Sbjct: 101 RDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKELVQSKSTKSNSSSPCD 160

Query: 181 ---EVVG----GARRMSLASDVEEEEEMTNKVEVFNLLAKQSRAKAKEKKR 211
              EVV          S    ++   +    ++     AK+SRAKA+ + R
Sbjct: 161 DCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDSHQAAAKESRAKARARAR 211

[Close]
BLAST of CmoCh01G004170 vs. Swiss-Prot
Match: TCP1_ARATH (Transcription factor TCP1 OS=Arabidopsis thaliana GN=TCP1 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.6e-20
Identity = 102/298 (34.23%), Postives = 140/298 (46.98%), Query Frame = 1 

Query: 61  GHFSTSTTPEAVINFAVAGSN----VQAFGNIPSAPGARMGTGKKDRHSKIYTAQGLRDR 120
           GH   S  PE++I++    SN     Q F   P          KKDRHSKI TAQG+RDR
Sbjct: 46  GHM-VSAVPESLIDYMAFKSNNVVNQQGF-EFPEVSKEIKKVVKKDRHSKIQTAQGIRDR 105

Query: 121 RVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRTKYGN-----FEVVGG 180
           RVRLSI IAR+FFDLQDMLG+DKASKTL+WL  KS+KAIKE+ + K  N     F  +GG
Sbjct: 106 RVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAIKEVVQAKNLNNDDEDFGNIGG 165

Query: 181 ARRMSLASDVEEEEEMTNKVEVFNLLAKQSRAKAKEKKRVDDENGDDDDDNDGKIDVHG- 240
                   DVE+EEE                               ++DDN  K  V+G 
Sbjct: 166 --------DVEQEEE------------------------------KEEDDNGDKSFVYGL 225

Query: 241 ----GETSNLSMEESSFMNKRK----------LYAK---KFIEDDEMKLCRDNNAEAS-- 300
               GE   +     + + K+K          L AK   K  E  +  +  DN   AS  
Sbjct: 226 SPGYGEEEVVCEATKAGIRKKKSELRNISSKGLGAKARGKAKERTKEMMAYDNPETASDI 285

Query: 301 -QWKLLDQMKASKGYFQEPSMIKRKWKPSIISGSSQRNLLISIDGIPINLTQNWEGNS 329
            Q +++D  K S  + +   M    +K  I    +Q ++L ++  +P  + Q++  N+
Sbjct: 286 TQSEIMDPFKRSIVFNEGEDMTHLFYKEPIEEFDNQESILTNMT-LPTKMGQSYNQNN 302

[Close]
BLAST of CmoCh01G004170 vs. Swiss-Prot
Match: CYCLD_ANTMH (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. cirrhigerum GN=CYC PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.1e-20
Identity = 69/171 (40.35%), Postives = 91/171 (53.22%), Query Frame = 1 

Query: 61  GHFSTSTTPEAVINFAVAGSN-------VQAFGNIPSAPGARMGTGKKDRHSKIYTAQGL 120
           GH+ T+     + + A+  +N       V      PS         KKDRHSKIYT+QG 
Sbjct: 33  GHYLTTANAPVLESTALFNNNNNFNHDVVNGLNRDPSPTFPTKQAVKKDRHSKIYTSQGP 92

Query: 121 RDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRTKYGNF------- 180
           RDRRVRLSI IARKFFDLQ+MLG+DK SKTL+WL +KSK A+KEL ++K           
Sbjct: 93  RDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAVKELVQSKSTKSNSSSPCD 152

Query: 181 ---EVVG----GARRMSLASDVEEEEEMTNKVEVFNLLAKQSRAKAKEKKR 211
              EVV          S    ++   +    ++     AK+SRAKA+ + R
Sbjct: 153 DCEEVVSVESENVTDHSKGKSLKANNKCKEAMDSHQAAAKESRAKARARAR 203

[Close]
BLAST of CmoCh01G004170 vs. TrEMBL
Match: A0A0A0LCE8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G265270 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 6.4e-72
Identity = 184/295 (62.37%), Postives = 199/295 (67.46%), Query Frame = 1 

Query: 88  IPSAPGA-RMGTGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEW 147
           IPSAPGA   G GKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEW
Sbjct: 3   IPSAPGAGTTGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEW 62

Query: 148 LFSKSKKAIKELSRTKYGNFEVVGGARRMSL---ASDVEEEEE----------------- 207
           LFSKSKKAIKELSRTK GN  V GGA++ SL   +SDVEEE +                 
Sbjct: 63  LFSKSKKAIKELSRTKSGNLGVHGGAKKFSLVADSSDVEEEYDDDKEGWELKMKSMLSID 122

Query: 208 -----MTNKVEVFNLLAKQSRAKAK--------EKKRVDD-------ENGDDDDDND-GK 267
                   KVE FNLLAK+SRAKA+        EKK+VD+       + G  +  N   K
Sbjct: 123 EQEKVSKEKVEGFNLLAKESRAKARARARERTMEKKQVDNRKVYGHQKGGAQEVSNHWSK 182

Query: 268 IDVHGGETSNLSMEESSFMNKRK-LYAKKFIEDD---EMKLCRDNNAEASQWKLLDQMKA 327
              H  ETSNLSMEESSF+NKRK +Y+KKFI  D   +     D NAE SQ KLLDQMKA
Sbjct: 183 HLNHSTETSNLSMEESSFINKRKIIYSKKFINHDNYSDKSRRDDENAETSQRKLLDQMKA 242

Query: 328 SKGYFQEPSMIKRKWKPSIISGSSQRNLLISIDGIPINLTQNWEGNSNPNYPFPK 337
           S          KRKWKPSIISGSSQRN LISIDGIPINLTQN + NSNPNYP  K
Sbjct: 243 S----------KRKWKPSIISGSSQRNFLISIDGIPINLTQNLDTNSNPNYPIAK 287

[Close]
BLAST of CmoCh01G004170 vs. TrEMBL
Match: A0A0B2R2P4_GLYSO (Transcription factor TCP1 OS=Glycine soja GN=glysoja_029602 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.3e-32
Identity = 94/202 (46.53%), Postives = 122/202 (60.40%), Query Frame = 1 

Query: 6   YNLNPFPYFPSSSTASYNLPLSIPSLLNSEPSPTTFNFHQPHQDPVSFLAPYFPIGHFST 65
           Y+ NP+P FPSSS++SY  P    +L N+  S T  +      DP+S   PY P  H + 
Sbjct: 4   YSSNPYPSFPSSSSSSYP-PFPFLNLENASASNTLLH------DPLS--VPYIPTHHHNP 63

Query: 66  STTPEAVINFAVAGSNVQAFGNIPSAPGARMGTG---------------KKDRHSKIYTA 125
           S+  EA+ N  V   N    G          G G               KKDRHSKIYT+
Sbjct: 64  SSIQEALNNLPVTDHNCGGGGGSAMTKPDSNGGGAPHYGISCFLTKKPPKKDRHSKIYTS 123

Query: 126 QGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRTKYGNFEVVG 185
           QGLRDRRVRLSI IARKFFDLQDMLG+DKAS TLEWLF+KSK+AIKEL+R+K+ N     
Sbjct: 124 QGLRDRRVRLSIAIARKFFDLQDMLGFDKASNTLEWLFNKSKRAIKELARSKHSNNNSDE 183

Query: 186 GARRMSLASDVEEEEEMTNKVE 193
           GA+  S +SD +++ E+ ++++
Sbjct: 184 GAKSFSSSSDCDDDCEVVSEIK 196

[Close]
BLAST of CmoCh01G004170 vs. TrEMBL
Match: K7MWI6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G044400 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.3e-32
Identity = 94/202 (46.53%), Postives = 122/202 (60.40%), Query Frame = 1 

Query: 6   YNLNPFPYFPSSSTASYNLPLSIPSLLNSEPSPTTFNFHQPHQDPVSFLAPYFPIGHFST 65
           Y+ NP+P FPSSS++SY  P    +L N+  S T  +      DP+S   PY P  H + 
Sbjct: 4   YSSNPYPSFPSSSSSSYP-PFPFLNLENASASNTLLH------DPLS--VPYIPTHHHNP 63

Query: 66  STTPEAVINFAVAGSNVQAFGNIPSAPGARMGTG---------------KKDRHSKIYTA 125
           S+  EA+ N  V   N    G          G G               KKDRHSKIYT+
Sbjct: 64  SSIQEALNNLPVTDHNCGGGGGSAMTKPDSNGGGAPHYGISCFLTKKPPKKDRHSKIYTS 123

Query: 126 QGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRTKYGNFEVVG 185
           QGLRDRRVRLSI IARKFFDLQDMLG+DKAS TLEWLF+KSK+AIKEL+R+K+ N     
Sbjct: 124 QGLRDRRVRLSIAIARKFFDLQDMLGFDKASNTLEWLFNKSKRAIKELARSKHSNNNSDE 183

Query: 186 GARRMSLASDVEEEEEMTNKVE 193
           GA+  S +SD +++ E+ ++++
Sbjct: 184 GAKSFSSSSDCDDDCEVVSEIK 196

[Close]
BLAST of CmoCh01G004170 vs. TrEMBL
Match: Q19CB1_LUPAN (Cycloidea-like protein group 1A (Fragment) OS=Lupinus angustifolius GN=LEGCYC1A PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.6e-30
Identity = 88/166 (53.01%), Postives = 107/166 (64.46%), Query Frame = 1 

Query: 10  PFPYFPSSSTASYNLPLSIPSLLNSEPSPTTFNFHQPHQDPVSFLAPY-FPIGHFSTSTT 69
           P+PYFPSSS++ +      P   +S     TF+      DP SF  PY  P  H   +  
Sbjct: 4   PYPYFPSSSSSYHPFAFFNPENASSN---NTFS-----HDPFSF--PYNMPNTHHYHAPN 63

Query: 70  PEAVINFAVAGSNVQAFGNIPSAPG--ARMGTGKKDRHSKIYTAQGLRDRRVRLSIDIAR 129
           PE V NFA  G++   F N  S     A+    KKDRHSKIYT+QGLRDRRVRLSI+IAR
Sbjct: 64  PETVANFADCGASAAMFKNDVSGSNFMAKKPAPKKDRHSKIYTSQGLRDRRVRLSIEIAR 123

Query: 130 KFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRTKYGNFEVVGGA 173
           KFFDLQDMLG+DKAS TLEWLF+KSKKA+KEL+R+K  +  VV  +
Sbjct: 124 KFFDLQDMLGFDKASNTLEWLFNKSKKAMKELARSKNSSSGVVANS 159

[Close]
BLAST of CmoCh01G004170 vs. TrEMBL
Match: E2DID3_9FABA (Cycloidea-like protein group 1A (Fragment) OS=Lupinus mariae-josephae GN=LEGCYC1A PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.3e-29
Identity = 87/171 (50.88%), Postives = 106/171 (61.99%), Query Frame = 1 

Query: 10  PFPYFPSSSTASYNLPLSIPSLLNSEPSPTTFNFHQPHQDPVSFLAPY-FPIGHFSTSTT 69
           P+PYFPSSS++ +      P   +S     TF+      DP SF  PY  P  H   +  
Sbjct: 6   PYPYFPSSSSSYHPFAFFNPENASSN---NTFS-----HDPFSF--PYNMPNTHHYHAPI 65

Query: 70  PEAVINFAVAGSNVQAFGNIPSAPG-------ARMGTGKKDRHSKIYTAQGLRDRRVRLS 129
           PE V NFA  G++   F N  S           +    KKDRHSKIYT+QGLRDRRVRLS
Sbjct: 66  PETVANFADCGASAAMFKNDVSGSNFGFNNFLTKKPAPKKDRHSKIYTSQGLRDRRVRLS 125

Query: 130 IDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRTKYGNFEVVGGA 173
           I+IARKFFDLQDMLG+DKAS TLEWLF+KSKKA+KEL+R+K  +  VV  +
Sbjct: 126 IEIARKFFDLQDMLGFDKASNTLEWLFNKSKKAMKELARSKNSSSGVVANS 166

[Close]
BLAST of CmoCh01G004170 vs. TAIR10
Match: AT1G68800.1 (AT1G68800.1 TCP domain protein 12)

HSP 1 Score: 102.8 bits (255), Expect = 4.1e-22
Identity = 60/119 (50.42%), Postives = 78/119 (65.55%), Query Frame = 1 

Query: 100 KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELS 159
           K+DRHSKI TAQG RDRR+RLS+ IARKFFDLQDMLG+DKASKT+EWLFSKSK +IK+L 
Sbjct: 112 KRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSKTSIKQLK 171

Query: 160 RTKYGNFEVVGGARRMSLASDVEEEEE--------MTNKVEVFNLLAKQSRAKAKEKKR 211
                +    GG +   L  D +E++E           K    +   K+SR +A+++ R
Sbjct: 172 ERVAAS---EGGGKDEHLQVDEKEKDETLKLRVSKRRTKTMESSFKTKESRERARKRAR 227

[Close]
BLAST of CmoCh01G004170 vs. TAIR10
Match: AT1G67260.1 (AT1G67260.1 TCP family transcription factor )

HSP 1 Score: 101.7 bits (252), Expect = 9.2e-22
Identity = 102/298 (34.23%), Postives = 140/298 (46.98%), Query Frame = 1 

Query: 61  GHFSTSTTPEAVINFAVAGSN----VQAFGNIPSAPGARMGTGKKDRHSKIYTAQGLRDR 120
           GH   S  PE++I++    SN     Q F   P          KKDRHSKI TAQG+RDR
Sbjct: 46  GHM-VSAVPESLIDYMAFKSNNVVNQQGF-EFPEVSKEIKKVVKKDRHSKIQTAQGIRDR 105

Query: 121 RVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRTKYGN-----FEVVGG 180
           RVRLSI IAR+FFDLQDMLG+DKASKTL+WL  KS+KAIKE+ + K  N     F  +GG
Sbjct: 106 RVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAIKEVVQAKNLNNDDEDFGNIGG 165

Query: 181 ARRMSLASDVEEEEEMTNKVEVFNLLAKQSRAKAKEKKRVDDENGDDDDDNDGKIDVHG- 240
                   DVE+EEE                               ++DDN  K  V+G 
Sbjct: 166 --------DVEQEEE------------------------------KEEDDNGDKSFVYGL 225

Query: 241 ----GETSNLSMEESSFMNKRK----------LYAK---KFIEDDEMKLCRDNNAEAS-- 300
               GE   +     + + K+K          L AK   K  E  +  +  DN   AS  
Sbjct: 226 SPGYGEEEVVCEATKAGIRKKKSELRNISSKGLGAKARGKAKERTKEMMAYDNPETASDI 285

Query: 301 -QWKLLDQMKASKGYFQEPSMIKRKWKPSIISGSSQRNLLISIDGIPINLTQNWEGNS 329
            Q +++D  K S  + +   M    +K  I    +Q ++L ++  +P  + Q++  N+
Sbjct: 286 TQSEIMDPFKRSIVFNEGEDMTHLFYKEPIEEFDNQESILTNMT-LPTKMGQSYNQNN 302

[Close]
BLAST of CmoCh01G004170 vs. TAIR10
Match: AT3G18550.1 (AT3G18550.1 TCP family transcription factor )

HSP 1 Score: 82.0 bits (201), Expect = 7.5e-16
Identity = 47/111 (42.34%), Postives = 69/111 (62.16%), Query Frame = 1 

Query: 57  YFPIGH--FSTSTTPEAVINFAVAGSNVQAFGNIPSAPGARMGTGKK----DRHSKIYTA 116
           +FP+ +      T P   IN       ++    I ++   +M   KK    DRHSKI TA
Sbjct: 105 HFPLNNTIVEQPTEPSETINL------IEDSQRISTSQDPKMKKAKKPSRTDRHSKIKTA 164

Query: 117 QGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRT 162
           +G RDRR+RLS+D+A++ F LQDMLG+DKASKT+EWL +++K  I +++ T
Sbjct: 165 KGTRDRRMRLSLDVAKELFGLQDMLGFDKASKTVEWLLTQAKPEIIKIATT 209

[Close]
BLAST of CmoCh01G004170 vs. TAIR10
Match: AT2G31070.1 (AT2G31070.1 TCP domain protein 10)

HSP 1 Score: 79.7 bits (195), Expect = 3.7e-15
Identity = 39/75 (52.00%), Postives = 53/75 (70.67%), Query Frame = 1 

Query: 86  GNIPSAPGARM--GTGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKT 145
           G I    G  +   TG+KDRHSK++T++G RDRRVRLS   A +F+D+QD LGYD+ SK 
Sbjct: 13  GEIVEVQGGHIIRATGRKDRHSKVFTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKA 72

Query: 146 LEWLFSKSKKAIKEL 159
           ++WL  K+K AI +L
Sbjct: 73  VDWLIKKAKTAIDKL 87

[Close]
BLAST of CmoCh01G004170 vs. TAIR10
Match: AT1G53230.1 (AT1G53230.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3)

HSP 1 Score: 79.7 bits (195), Expect = 3.7e-15
Identity = 45/103 (43.69%), Postives = 64/103 (62.14%), Query Frame = 1 

Query: 62  HFSTSTTPEAVI--NFAVAGSNVQAFGNIPSAPGARM--GTGKKDRHSKIYTAQGLRDRR 121
           HF  S +P  +   +   A  N    G I    G  +   TG+KDRHSK+ TA+G RDRR
Sbjct: 7   HFLDSPSPPLLEMRHHQSATENGGGCGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRR 66

Query: 122 VRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSR 161
           VRLS   A +F+D+QD LG+D+ SK ++WL +K+K AI +L++
Sbjct: 67  VRLSAPTAIQFYDVQDRLGFDRPSKAVDWLITKAKSAIDDLAQ 109

[Close]
BLAST of CmoCh01G004170 vs. NCBI nr
Match: gi|778680634|ref|XP_011651364.1| (PREDICTED: transcription factor CYCLOIDEA [Cucumis sativus])

HSP 1 Score: 386.3 bits (991), Expect = 5.3e-104
Identity = 251/392 (64.03%), Postives = 274/392 (69.90%), Query Frame = 1 

Query: 1   MGSSSYNLNPFPYFPSSS---TASYNLPLSIPSLLNSEPSPT---TFNFH-QPHQDPVSF 60
           MGSS+YNLNPF  FPSS+   T SYNLP SIPSLLNS+PS +   T NFH QPHQDP+SF
Sbjct: 1   MGSSNYNLNPFHCFPSSTSSTTNSYNLPPSIPSLLNSDPSSSNTSTINFHHQPHQDPLSF 60

Query: 61  LAPYFPIGHFSTSTTPE-AVINFAVAGSNVQAFGN--IPSAPGA-RMGTGKKDRHSKIYT 120
           LAPYFPI HFS    PE AVINFAVAG+N+QA G+  IPSAPGA   G GKKDRHSKIYT
Sbjct: 61  LAPYFPIAHFSALAPPETAVINFAVAGNNIQALGDMVIPSAPGAGTTGMGKKDRHSKIYT 120

Query: 121 AQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRTKYGNFEVV 180
           AQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRTK GN  V 
Sbjct: 121 AQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRTKSGNLGVH 180

Query: 181 GGARRMSL---ASDVEEEEE----------------------MTNKVEVFNLLAKQSRAK 240
           GGA++ SL   +SDVEEE +                         KVE FNLLAK+SRAK
Sbjct: 181 GGAKKFSLVADSSDVEEEYDDDKEGWELKMKSMLSIDEQEKVSKEKVEGFNLLAKESRAK 240

Query: 241 AK--------EKKRVDD-------ENGDDDDDND-GKIDVHGGETSNLSMEESSFMNKRK 300
           A+        EKK+VD+       + G  +  N   K   H  ETSNLSMEESSF+NKRK
Sbjct: 241 ARARARERTMEKKQVDNRKVYGHQKGGAQEVSNHWSKHLNHSTETSNLSMEESSFINKRK 300

Query: 301 -LYAKKFIEDD---EMKLCRDNNAEASQWKLLDQMKASKGYFQEPSMIKRKWKPSIISGS 337
            +Y+KKFI  D   +     D NAE SQ KLLDQMKAS          KRKWKPSIISGS
Sbjct: 301 IIYSKKFINHDNYSDKSRRDDENAETSQRKLLDQMKAS----------KRKWKPSIISGS 360

[Close]
BLAST of CmoCh01G004170 vs. NCBI nr
Match: gi|659123314|ref|XP_008461599.1| (PREDICTED: transcription factor CYCLOIDEA, partial [Cucumis melo])

HSP 1 Score: 386.3 bits (991), Expect = 5.3e-104
Identity = 247/384 (64.32%), Postives = 273/384 (71.09%), Query Frame = 1 

Query: 1   MGSSSYNLNPFPYFPSSS---TASYNLPLSIPSLLNSEPSP---TTFNFH-QPHQDPVSF 60
           MGSSSYN NPFP FPSSS   T SYNLPLSIPSLLN +PS    +T NFH QPHQDP+SF
Sbjct: 1   MGSSSYNPNPFPCFPSSSSSTTNSYNLPLSIPSLLNFDPSSNNTSTVNFHHQPHQDPLSF 60

Query: 61  LAPYFPIGHFSTSTTPE-AVINFAVAGSNVQAFGN--IPSAPGA-RMGTGKKDRHSKIYT 120
           LAPYFPI HFST T PE AVINFAVAG+N+QA G+  +PSAPGA   G GKKDRHSKIYT
Sbjct: 61  LAPYFPIAHFSTLTPPETAVINFAVAGNNIQALGDMVVPSAPGAGTTGMGKKDRHSKIYT 120

Query: 121 AQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRTKYGNFEVV 180
           AQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKS+KAIKELSRTK   F   
Sbjct: 121 AQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSRKAIKELSRTKNVGFH-- 180

Query: 181 GGARRMSLA---SDVEEEEE---------------------MTNKVEVFNLLAKQSRAKA 240
           GGA+++SLA   SDVEEE +                        KVE+FNL+AK+SRAKA
Sbjct: 181 GGAKKLSLAAASSDVEEEYDDDKGWELKMKSMLRIDEQEKVSKEKVEIFNLVAKESRAKA 240

Query: 241 K--------EKKRVDDE--------NGDDDDDNDGKIDVHGGETSNLSMEESSFMNKRKL 300
           +        EKK+VDD            +  D+  K   H  ETSNLSMEESSFMNKRK+
Sbjct: 241 RARARERTMEKKQVDDSKVYGHQKGGAQEVSDHWSKHLNHSTETSNLSMEESSFMNKRKI 300

Query: 301 YAKKFIEDDE---MKLCRDN-NAEASQWKLLDQMKASKGYFQEPSMIKRKWKPSIISGSS 330
           YAKKFI  D    +K CRD+ NAE S WKLLDQMKAS          KRKWKPSIISGSS
Sbjct: 301 YAKKFINHDNYTTVKSCRDDENAETSHWKLLDQMKAS----------KRKWKPSIISGSS 360

[Close]
BLAST of CmoCh01G004170 vs. NCBI nr
Match: gi|700202598|gb|KGN57731.1| (hypothetical protein Csa_3G265270 [Cucumis sativus])

HSP 1 Score: 279.3 bits (713), Expect = 9.1e-72
Identity = 184/295 (62.37%), Postives = 199/295 (67.46%), Query Frame = 1 

Query: 88  IPSAPGA-RMGTGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEW 147
           IPSAPGA   G GKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEW
Sbjct: 3   IPSAPGAGTTGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEW 62

Query: 148 LFSKSKKAIKELSRTKYGNFEVVGGARRMSL---ASDVEEEEE----------------- 207
           LFSKSKKAIKELSRTK GN  V GGA++ SL   +SDVEEE +                 
Sbjct: 63  LFSKSKKAIKELSRTKSGNLGVHGGAKKFSLVADSSDVEEEYDDDKEGWELKMKSMLSID 122

Query: 208 -----MTNKVEVFNLLAKQSRAKAK--------EKKRVDD-------ENGDDDDDND-GK 267
                   KVE FNLLAK+SRAKA+        EKK+VD+       + G  +  N   K
Sbjct: 123 EQEKVSKEKVEGFNLLAKESRAKARARARERTMEKKQVDNRKVYGHQKGGAQEVSNHWSK 182

Query: 268 IDVHGGETSNLSMEESSFMNKRK-LYAKKFIEDD---EMKLCRDNNAEASQWKLLDQMKA 327
              H  ETSNLSMEESSF+NKRK +Y+KKFI  D   +     D NAE SQ KLLDQMKA
Sbjct: 183 HLNHSTETSNLSMEESSFINKRKIIYSKKFINHDNYSDKSRRDDENAETSQRKLLDQMKA 242

Query: 328 SKGYFQEPSMIKRKWKPSIISGSSQRNLLISIDGIPINLTQNWEGNSNPNYPFPK 337
           S          KRKWKPSIISGSSQRN LISIDGIPINLTQN + NSNPNYP  K
Sbjct: 243 S----------KRKWKPSIISGSSQRNFLISIDGIPINLTQNLDTNSNPNYPIAK 287

[Close]
BLAST of CmoCh01G004170 vs. NCBI nr
Match: gi|356573907|ref|XP_003555097.1| (PREDICTED: transcription factor CYCLOIDEA-like [Glycine max])

HSP 1 Score: 148.7 bits (374), Expect = 1.9e-32
Identity = 94/202 (46.53%), Postives = 122/202 (60.40%), Query Frame = 1 

Query: 6   YNLNPFPYFPSSSTASYNLPLSIPSLLNSEPSPTTFNFHQPHQDPVSFLAPYFPIGHFST 65
           Y+ NP+P FPSSS++SY  P    +L N+  S T  +      DP+S   PY P  H + 
Sbjct: 4   YSSNPYPSFPSSSSSSYP-PFPFLNLENASASNTLLH------DPLS--VPYIPTHHHNP 63

Query: 66  STTPEAVINFAVAGSNVQAFGNIPSAPGARMGTG---------------KKDRHSKIYTA 125
           S+  EA+ N  V   N    G          G G               KKDRHSKIYT+
Sbjct: 64  SSIQEALNNLPVTDHNCGGGGGSAMTKPDSNGGGAPHYGISCFLTKKPPKKDRHSKIYTS 123

Query: 126 QGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRTKYGNFEVVG 185
           QGLRDRRVRLSI IARKFFDLQDMLG+DKAS TLEWLF+KSK+AIKEL+R+K+ N     
Sbjct: 124 QGLRDRRVRLSIAIARKFFDLQDMLGFDKASNTLEWLFNKSKRAIKELARSKHSNNNSDE 183

Query: 186 GARRMSLASDVEEEEEMTNKVE 193
           GA+  S +SD +++ E+ ++++
Sbjct: 184 GAKSFSSSSDCDDDCEVVSEIK 196

[Close]
BLAST of CmoCh01G004170 vs. NCBI nr
Match: gi|106896606|gb|ABF82965.1| (cycloidea-like protein group 1A, partial [Lupinus angustifolius])

HSP 1 Score: 141.7 bits (356), Expect = 2.3e-30
Identity = 88/166 (53.01%), Postives = 107/166 (64.46%), Query Frame = 1 

Query: 10  PFPYFPSSSTASYNLPLSIPSLLNSEPSPTTFNFHQPHQDPVSFLAPY-FPIGHFSTSTT 69
           P+PYFPSSS++ +      P   +S     TF+      DP SF  PY  P  H   +  
Sbjct: 4   PYPYFPSSSSSYHPFAFFNPENASSN---NTFS-----HDPFSF--PYNMPNTHHYHAPN 63

Query: 70  PEAVINFAVAGSNVQAFGNIPSAPG--ARMGTGKKDRHSKIYTAQGLRDRRVRLSIDIAR 129
           PE V NFA  G++   F N  S     A+    KKDRHSKIYT+QGLRDRRVRLSI+IAR
Sbjct: 64  PETVANFADCGASAAMFKNDVSGSNFMAKKPAPKKDRHSKIYTSQGLRDRRVRLSIEIAR 123

Query: 130 KFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRTKYGNFEVVGGA 173
           KFFDLQDMLG+DKAS TLEWLF+KSKKA+KEL+R+K  +  VV  +
Sbjct: 124 KFFDLQDMLGFDKASNTLEWLFNKSKKAMKELARSKNSSSGVVANS 159

The following BLAST results are available for this feature:
BLAST of CmoCh01G004170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TCP12_ARATH7.3e-2150.42Transcription factor TCP12 OS=Arabidopsis thaliana GN=TCP12 PE=2 SV=1[more]
CYCLD_ANTML1.6e-2040.94Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. linkianum ... [more]
CYCLD_ANTMA1.6e-2040.94Transcription factor CYCLOIDEA OS=Antirrhinum majus GN=CYC PE=1 SV=1[more]
TCP1_ARATH1.6e-2034.23Transcription factor TCP1 OS=Arabidopsis thaliana GN=TCP1 PE=1 SV=1[more]
CYCLD_ANTMH2.1e-2040.35Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. cirrhigeru... [more]
BLAST of CmoCh01G004170 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCE8_CUCSA6.4e-7262.37Uncharacterized protein OS=Cucumis sativus GN=Csa_3G265270 PE=4 SV=1[more]
A0A0B2R2P4_GLYSO1.3e-3246.53Transcription factor TCP1 OS=Glycine soja GN=glysoja_029602 PE=4 SV=1[more]
K7MWI6_SOYBN1.3e-3246.53Uncharacterized protein OS=Glycine max GN=GLYMA_19G044400 PE=4 SV=1[more]
Q19CB1_LUPAN1.6e-3053.01Cycloidea-like protein group 1A (Fragment) OS=Lupinus angustifolius GN=LEGCYC1A ... [more]
E2DID3_9FABA2.3e-2950.88Cycloidea-like protein group 1A (Fragment) OS=Lupinus mariae-josephae GN=LEGCYC1... [more]
BLAST of CmoCh01G004170 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G68800.14.1e-2250.42 TCP domain protein 12[more]
AT1G67260.19.2e-2234.23 TCP family transcription factor [more]
AT3G18550.17.5e-1642.34 TCP family transcription factor [more]
AT2G31070.13.7e-1552.00 TCP domain protein 10[more]
AT1G53230.13.7e-1543.69 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3[more]
BLAST of CmoCh01G004170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778680634|ref|XP_011651364.1|5.3e-10464.03PREDICTED: transcription factor CYCLOIDEA [Cucumis sativus][more]
gi|659123314|ref|XP_008461599.1|5.3e-10464.32PREDICTED: transcription factor CYCLOIDEA, partial [Cucumis melo][more]
gi|700202598|gb|KGN57731.1|9.1e-7262.37hypothetical protein Csa_3G265270 [Cucumis sativus][more]
gi|356573907|ref|XP_003555097.1|1.9e-3246.53PREDICTED: transcription factor CYCLOIDEA-like [Glycine max][more]
gi|106896606|gb|ABF82965.1|2.3e-3053.01cycloidea-like protein group 1A, partial [Lupinus angustifolius][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005333Transcription_factor_TCP
IPR017887TF_TCP_subgr
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G004170.1CmoCh01G004170.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005333Transcription factor, TCPPFAMPF03634TCPcoord: 98..217
score: 4.5
IPR017887Transcription factor TCP subgroupPROFILEPS51369TCPcoord: 100..158
score: 36
NoneNo IPR availablePANTHERPTHR31072FAMILY NOT NAMEDcoord: 11..161
score: 9.6
NoneNo IPR availablePANTHERPTHR31072:SF18TRANSCRIPTION FACTOR TCP1coord: 11..161
score: 9.6