CmaCh14G007990 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh14G007990
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Cycloidea-like protein group 1A
Location	Cma_Chr14 : 4047354 .. 4048295 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCTTCAAGCTTCAATCTCAACCCTTTCCCTTGCTTTCCTCTTGCCTTTCCTTCACTTCTCAACCATGACCCTTCACCCAACAACCCTACTTTCAACTTCAATCAACCCCATCTAGATCCACTCTCATTTCTTCCTCCCTATTTCCCGATCGCCCACTTCTCGGCGTCCGCTACGGGGAACAGTATCCAAGCTCTCGGCGACATCCCGAGTGCTCTTACTGTCGGGACGGGGACGGGGACGAGGATGGGGAAGAAGGATCGACATAGCAAGATTTACACAGCACAGGGTTTACGGGATCGGAGAGTGAGATTATCCATCGATATAGCTCGAAAGTTCTTTGATTTGCAAGATATGTTAGGGTATGACAAAGCTAGCAAAACCCTAGAGTGGCTTTTTGGTAAATCTAGAAAAGCAATTAAAGAGCTTTCAAGGTCCAAGTATGGAAATGTTGAAGATAAGGAGGAAGATAGTGAAAAAGTTGAAGTTTTTAATCTTCTTGCTAAAGAATCAAGAGCCAAGGCACGAGCAAGAGCCACGGACGACGACGACGACAATGACAATGACAATGACAATGACAAAAAATATTATGGTCATCAGATGAGCCATGTTGAGGAAGTTTCAGATCATTGGAGTACTGAAACTTCAAATCTATCAATGGAGGAATACTCTTTCATGAACAAGAGAAGGATTTGTGCTATCAAGTTCATCGGCGGCGACGACAACGAAAATATGAAACCGTGTCGGGACGACGATGCCGAAGCTTCAAAAGGGCATTTACAAGAACACTCCATGATCAAGAGGAAATGGAAAGCTTCCTCCATTGATGGCATCCCAAGTTATCCTTTTTCCAAGTAATTTCAACCATCAAAGTCTTGAAATTTCTGCTTTTTTACCCTAAAATTTCTGATTTTTCTATGTTTTTTTTGCAGGATTTGA

mRNA sequence

ATGGCATCTTCAAGCTTCAATCTCAACCCTTTCCCTTGCTTTCCTCTTGCCTTTCCTTCACTTCTCAACCATGACCCTTCACCCAACAACCCTACTTTCAACTTCAATCAACCCCATCTAGATCCACTCTCATTTCTTCCTCCCTATTTCCCGATCGCCCACTTCTCGGCGTCCGCTACGGGGAACAGTATCCAAGCTCTCGGCGACATCCCGAGTGCTCTTACTGTCGGGACGGGGACGGGGACGAGGATGGGGAAGAAGGATCGACATAGCAAGATTTACACAGCACAGGGTTTACGGGATCGGAGAGTGAGATTATCCATCGATATAGCTCGAAAGTTCTTTGATTTGCAAGATATGTTAGGGTATGACAAAGCTAGCAAAACCCTAGAGTGGCTTTTTGGTAAATCTAGAAAAGCAATTAAAGAGCTTTCAAGGTCCAAGTATGGAAATGTTGAAGATAAGGAGGAAGATAGTGAAAAAGTTGAAGTTTTTAATCTTCTTGCTAAAGAATCAAGAGCCAAGGCACGAGCAAGAGCCACGGACGACGACGACGACAATGACAATGACAATGACAATGACAAAAAATATTATGGTCATCAGATGAGCCATGTTGAGGAAGTTTCAGATCATTGGAGTACTGAAACTTCAAATCTATCAATGGAGGAATACTCTTTCATGAACAAGAGAAGGATTTGTGCTATCAAGTTCATCGGCGGCGACGACAACGAAAATATGAAACCGTGTCGGGACGACGATGCCGAAGCTTCAAAAGGGCATTTACAAGAACACTCCATGATCAAGAGGAAATGGAAAGCTTCCTCCATTGATGGCATCCCAAGTTATCCTTTTTCCAAGATTTGA

Coding sequence (CDS)

ATGGCATCTTCAAGCTTCAATCTCAACCCTTTCCCTTGCTTTCCTCTTGCCTTTCCTTCACTTCTCAACCATGACCCTTCACCCAACAACCCTACTTTCAACTTCAATCAACCCCATCTAGATCCACTCTCATTTCTTCCTCCCTATTTCCCGATCGCCCACTTCTCGGCGTCCGCTACGGGGAACAGTATCCAAGCTCTCGGCGACATCCCGAGTGCTCTTACTGTCGGGACGGGGACGGGGACGAGGATGGGGAAGAAGGATCGACATAGCAAGATTTACACAGCACAGGGTTTACGGGATCGGAGAGTGAGATTATCCATCGATATAGCTCGAAAGTTCTTTGATTTGCAAGATATGTTAGGGTATGACAAAGCTAGCAAAACCCTAGAGTGGCTTTTTGGTAAATCTAGAAAAGCAATTAAAGAGCTTTCAAGGTCCAAGTATGGAAATGTTGAAGATAAGGAGGAAGATAGTGAAAAAGTTGAAGTTTTTAATCTTCTTGCTAAAGAATCAAGAGCCAAGGCACGAGCAAGAGCCACGGACGACGACGACGACAATGACAATGACAATGACAATGACAAAAAATATTATGGTCATCAGATGAGCCATGTTGAGGAAGTTTCAGATCATTGGAGTACTGAAACTTCAAATCTATCAATGGAGGAATACTCTTTCATGAACAAGAGAAGGATTTGTGCTATCAAGTTCATCGGCGGCGACGACAACGAAAATATGAAACCGTGTCGGGACGACGATGCCGAAGCTTCAAAAGGGCATTTACAAGAACACTCCATGATCAAGAGGAAATGGAAAGCTTCCTCCATTGATGGCATCCCAAGTTATCCTTTTTCCAAGATTTGA

Protein sequence

MASSSFNLNPFPCFPLAFPSLLNHDPSPNNPTFNFNQPHLDPLSFLPPYFPIAHFSASATGNSIQALGDIPSALTVGTGTGTRMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELSRSKYGNVEDKEEDSEKVEVFNLLAKESRAKARARATDDDDDNDNDNDNDKKYYGHQMSHVEEVSDHWSTETSNLSMEEYSFMNKRRICAIKFIGGDDNENMKPCRDDDAEASKGHLQEHSMIKRKWKASSIDGIPSYPFSKI

Homology

[Close]

BLAST of CmaCh14G007990 vs. Swiss-Prot
Match: CYCLD_ANTMA (Transcription factor CYCLOIDEA OS=Antirrhinum majus GN=CYC PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 9.7e-22
Identity = 69/126 (54.76%), Postives = 78/126 (61.90%), Query Frame = 1


Query: 86  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELS 145
           KKDRHSKIYT+QG RDRRVRLSI IARKFFDLQ+MLG+DK SKTL+WL  KS+ AIKEL 
Sbjct: 87  KKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKELV 146

Query: 146 RSK------YGNVEDKEE----DSEKV-------------------EVFNLLAKESRAKA 183
           +SK          +D EE    DSE V                   +     AKESRAKA
Sbjct: 147 QSKSTKSNSSSPCDDCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDSHQAAAKESRAKA 206

[Close]

BLAST of CmaCh14G007990 vs. Swiss-Prot
Match: CYCLD_ANTML (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. linkianum GN=CYC PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 9.7e-22
Identity = 69/126 (54.76%), Postives = 78/126 (61.90%), Query Frame = 1


Query: 86  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELS 145
           KKDRHSKIYT+QG RDRRVRLSI IARKFFDLQ+MLG+DK SKTL+WL  KS+ AIKEL 
Sbjct: 79  KKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKELV 138

Query: 146 RSK------YGNVEDKEE----DSEKV-------------------EVFNLLAKESRAKA 183
           +SK          +D EE    DSE V                   +     AKESRAKA
Sbjct: 139 QSKSTKSNSSSPCDDCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDSHQAAAKESRAKA 198

[Close]

BLAST of CmaCh14G007990 vs. Swiss-Prot
Match: CYCLD_ANTMH (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. cirrhigerum GN=CYC PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.0e-20
Identity = 53/79 (67.09%), Postives = 62/79 (78.48%), Query Frame = 1


Query: 86  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKEL- 145
           KKDRHSKIYT+QG RDRRVRLSI IARKFFDLQ+MLG+DK SKTL+WL  KS+ A+KEL 
Sbjct: 79  KKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAVKELV 138

Query: 146 -SRSKYGNVEDKEEDSEKV 163
            S+S   N     +D E+V
Sbjct: 139 QSKSTKSNSSSPCDDCEEV 157

[Close]

BLAST of CmaCh14G007990 vs. Swiss-Prot
Match: TCP1_ARATH (Transcription factor TCP1 OS=Arabidopsis thaliana GN=TCP1 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.0e-20
Identity = 61/123 (49.59%), Postives = 81/123 (65.85%), Query Frame = 1


Query: 86  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELS 145
           KKDRHSKI TAQG+RDRRVRLSI IAR+FFDLQDMLG+DKASKTL+WL  KSRKAIKE+ 
Sbjct: 87  KKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAIKEVV 146

Query: 146 RSKYGNVEDKEEDSEKVEVFNLLAKESRAKARARATDDDDDNDNDNDNDKKY-YGHQMSH 205
           ++K  N+ + +ED   +                   + +++ + D++ DK + YG    +
Sbjct: 147 QAK--NLNNDDEDFGNI---------------GGDVEQEEEKEEDDNGDKSFVYGLSPGY 192

Query: 206 VEE 208
            EE
Sbjct: 207 GEE 192

[Close]

BLAST of CmaCh14G007990 vs. Swiss-Prot
Match: TCP12_ARATH (Transcription factor TCP12 OS=Arabidopsis thaliana GN=TCP12 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.5e-18
Identity = 89/264 (33.71%), Postives = 127/264 (48.11%), Query Frame = 1


Query: 18  FPSLLNHDPSPNN------PTFNFNQPHLDPL--SFLPPYFPIAHFSASATGNSIQALGD 77
           FPS + H  SPN+      P+F F+   L+    SFL   F +     +A  N +++   
Sbjct: 24  FPSFITHIQSPNSHHHYSSPSFPFSSDFLESFDESFLINQFLLQQQDVAA--NVVESPWK 83

Query: 78  IPSALTVGT-------GTGTR-------MGKKDRHSKIYTAQGLRDRRVRLSIDIARKFF 137
               L +         G+ ++       + K+DRHSKI TAQG RDRR+RLS+ IARKFF
Sbjct: 84  FCKKLELKKKNEKCVDGSTSQEVQWRRTVKKRDRHSKICTAQGPRDRRMRLSLQIARKFF 143

Query: 138 DLQDMLGYDKASKTLEWLFGKSRKAIKEL----------SRSKYGNVEDKEEDS------ 197
           DLQDMLG+DKASKT+EWLF KS+ +IK+L           + ++  V++KE+D       
Sbjct: 144 DLQDMLGFDKASKTIEWLFSKSKTSIKQLKERVAASEGGGKDEHLQVDEKEKDETLKLRV 203

Query: 198 ----EKVEVFNLLAKESRAKARARA---------------TDDDDDNDNDNDNDKKYYGH 225
                K    +   KESR +AR RA               ++   D   +    K   G 
Sbjct: 204 SKRRTKTMESSFKTKESRERARKRARERTMAKMKMRLFETSETISDPHQETREIKITNGV 263

[Close]

BLAST of CmaCh14G007990 vs. TrEMBL
Match: A0A0A0LCE8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G265270 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.3e-28
Identity = 71/83 (85.54%), Postives = 74/83 (89.16%), Query Frame = 1


Query: 70  IPSALTVGTGTGTRMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKT 129
           IPSA   GT   T MGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKT
Sbjct: 3   IPSAPGAGT---TGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKT 62

Query: 130 LEWLFGKSRKAIKELSRSKYGNV 153
           LEWLF KS+KAIKELSR+K GN+
Sbjct: 63  LEWLFSKSKKAIKELSRTKSGNL 82

[Close]

BLAST of CmaCh14G007990 vs. TrEMBL
Match: V7B185_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G020400g PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.5e-24
Identity = 96/215 (44.65%), Postives = 121/215 (56.28%), Query Frame = 1


Query: 2   ASSSFNLNPFPCFPLAFP-----SLLNHDPSPNN--PTFNFNQPHLDPLSFLPPYFPIAH 61
           +SSS + +P+P F    P     S   HDP      PT N++ P  + L+     + +A 
Sbjct: 17  SSSSSSTSPYPSFTFLHPENSSSSTFLHDPLSVTFIPT-NYHAPIPETLA----NWAVAD 76

Query: 62  FSASATGNSIQALGDIPSALTVGTGTGTRMGKKDRHSKIYTAQGLRDRRVRLSIDIARKF 121
           ++A+A  N  Q LG     +T      T   KKDRHSKI+T+QGLRDRRVRLSI+IARKF
Sbjct: 77  YAAAAMLN--QDLGGALYGITKKPAKKTT--KKDRHSKIHTSQGLRDRRVRLSIEIARKF 136

Query: 122 FDLQDMLGYDKASKTLEWLFGKSRKAIKELSRSKY------------GNV-----EDKEE 181
           FDLQDMLG+DKAS TL+WLF KS+KAIKEL+RSK+            G V     +DKE+
Sbjct: 137 FDLQDMLGFDKASNTLDWLFTKSKKAIKELTRSKHSVDSFEFSSSSDGEVVSVIHQDKEQ 196

Query: 182 D----------SEKVEVFNLLAKESRAKARARATD 183
                       E V       KESR KARARA +
Sbjct: 197 HQGVDLEEGKLKEPVYCVKAKMKESREKARARARE 222

[Close]

BLAST of CmaCh14G007990 vs. TrEMBL
Match: Q6VM81_9FABA (CYCLOIDEA-like group 1B protein (Fragment) OS=Lupinus breweri var. breweri PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.2e-24
Identity = 79/185 (42.70%), Postives = 103/185 (55.68%), Query Frame = 1


Query: 3   SSSFNLNPFPCFPLA------FPSLLNHDPSPNNPTFNFNQPHLDPLSFLPPYFPIAH-- 62
           S+  +  P+ C+  A      FP L   + S +N   N N  H DPL  +P   P  H  
Sbjct: 1   STYISSGPYSCYSSASNSYPFFPFLNPENASSSNNNNNHNLLH-DPLVHVPYNLPSHHHI 60

Query: 63  -----FSASATGNSIQALGDIPSALTVGTGTG---------------TRMGKKDRHSKIY 122
                   + T  ++  +  +P    + +G G                +  KKDRHSKIY
Sbjct: 61  HNTPIIQETLTNLAVSDVATMPKQDPIMSGGGGGGVQHHYGLSSLLTKKPAKKDRHSKIY 120

Query: 123 TAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELSRSKYGNVED 160
           T+QGLRDRRVRLSI+IARKFFDLQDMLG+DKAS TLEWLF KS++AIK+L+RSK  N  D
Sbjct: 121 TSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKRAIKDLARSKKSNGSD 180

[Close]

BLAST of CmaCh14G007990 vs. TrEMBL
Match: Q6VM77_LUPDE (CYCLOIDEA-like group 1B protein (Fragment) OS=Lupinus microcarpus var. densiflorus PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.2e-24
Identity = 80/179 (44.69%), Postives = 101/179 (56.42%), Query Frame = 1


Query: 2   ASSSFNLNPFPCFPLA------FPSLLNHDPSPNNPTFNFNQPHLDPLSFLPPYFP---- 61
           +S+  +  P+PC+  A      FP L   + S ++   N N  H DPL  +P   P    
Sbjct: 1   SSTYISSGPYPCYSSASNSYPFFPFLNPENGSSSSNNNNHNLLH-DPLVHVPYNLPTIHH 60

Query: 62  ------IAHFSASATGNSIQALGDIPSALTVGTGTG-------------TRMGKKDRHSK 121
                 I H + +    S  A   +P    + +G G              +  KKDRHSK
Sbjct: 61  HIHNTPIIHETLTNLAVSDAAAATMPKQDPIMSGGGGAHHHYGLSSLLTKKPAKKDRHSK 120

Query: 122 IYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELSRSKYGN 152
           IYT+QGLRDRRVRLSI+IARKFFDLQDMLG+DKAS TLEWLF KS++AIKEL+RSK  N
Sbjct: 121 IYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKRAIKELARSKKSN 178

[Close]

BLAST of CmaCh14G007990 vs. TrEMBL
Match: Q6VM79_LUPDE (CYCLOIDEA-like group 1B protein (Fragment) OS=Lupinus microcarpus var. densiflorus PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 9.4e-24
Identity = 80/179 (44.69%), Postives = 101/179 (56.42%), Query Frame = 1


Query: 2   ASSSFNLNPFPCFPLA------FPSLLNHDPSPNNPTFNFNQPHLDPLSFLPPYFP---- 61
           +S+  +  P+PC+  A      FP L   + S ++   N N  H DPL  +P   P    
Sbjct: 1   SSTYXSSGPYPCYSSASNSYPFFPFLNPENGSSSSNNNNHNLLH-DPLVHVPYNLPTIHH 60

Query: 62  ------IAHFSASATGNSIQALGDIPSALTVGTGTG-------------TRMGKKDRHSK 121
                 I H + +    S  A   +P    + +G G              +  KKDRHSK
Sbjct: 61  HIHNTPIIHETLTNLAVSDAAAATMPKQDPIMSGGGGAHHHYGLSCLLTKKPAKKDRHSK 120

Query: 122 IYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELSRSKYGN 152
           IYT+QGLRDRRVRLSI+IARKFFDLQDMLG+DKAS TLEWLF KS++AIKEL+RSK  N
Sbjct: 121 IYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKRAIKELARSKKSN 178

[Close]

BLAST of CmaCh14G007990 vs. TAIR10
Match: AT1G67260.1 (AT1G67260.1 TCP family transcription factor )

HSP 1 Score: 99.0 bits (245), Expect = 5.1e-21
Identity = 61/123 (49.59%), Postives = 81/123 (65.85%), Query Frame = 1


Query: 86  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELS 145
           KKDRHSKI TAQG+RDRRVRLSI IAR+FFDLQDMLG+DKASKTL+WL  KSRKAIKE+ 
Sbjct: 87  KKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAIKEVV 146

Query: 146 RSKYGNVEDKEEDSEKVEVFNLLAKESRAKARARATDDDDDNDNDNDNDKKY-YGHQMSH 205
           ++K  N+ + +ED   +                   + +++ + D++ DK + YG    +
Sbjct: 147 QAK--NLNNDDEDFGNI---------------GGDVEQEEEKEEDDNGDKSFVYGLSPGY 192

Query: 206 VEE 208
            EE
Sbjct: 207 GEE 192

[Close]

BLAST of CmaCh14G007990 vs. TAIR10
Match: AT1G68800.1 (AT1G68800.1 TCP domain protein 12)

HSP 1 Score: 92.8 bits (229), Expect = 3.6e-19
Identity = 89/264 (33.71%), Postives = 127/264 (48.11%), Query Frame = 1


Query: 18  FPSLLNHDPSPNN------PTFNFNQPHLDPL--SFLPPYFPIAHFSASATGNSIQALGD 77
           FPS + H  SPN+      P+F F+   L+    SFL   F +     +A  N +++   
Sbjct: 24  FPSFITHIQSPNSHHHYSSPSFPFSSDFLESFDESFLINQFLLQQQDVAA--NVVESPWK 83

Query: 78  IPSALTVGT-------GTGTR-------MGKKDRHSKIYTAQGLRDRRVRLSIDIARKFF 137
               L +         G+ ++       + K+DRHSKI TAQG RDRR+RLS+ IARKFF
Sbjct: 84  FCKKLELKKKNEKCVDGSTSQEVQWRRTVKKRDRHSKICTAQGPRDRRMRLSLQIARKFF 143

Query: 138 DLQDMLGYDKASKTLEWLFGKSRKAIKEL----------SRSKYGNVEDKEEDS------ 197
           DLQDMLG+DKASKT+EWLF KS+ +IK+L           + ++  V++KE+D       
Sbjct: 144 DLQDMLGFDKASKTIEWLFSKSKTSIKQLKERVAASEGGGKDEHLQVDEKEKDETLKLRV 203

Query: 198 ----EKVEVFNLLAKESRAKARARA---------------TDDDDDNDNDNDNDKKYYGH 225
                K    +   KESR +AR RA               ++   D   +    K   G 
Sbjct: 204 SKRRTKTMESSFKTKESRERARKRARERTMAKMKMRLFETSETISDPHQETREIKITNGV 263

[Close]

BLAST of CmaCh14G007990 vs. TAIR10
Match: AT3G18550.1 (AT3G18550.1 TCP family transcription factor )

HSP 1 Score: 75.5 bits (184), Expect = 6.0e-14
Identity = 50/143 (34.97%), Postives = 75/143 (52.45%), Query Frame = 1


Query: 9   NPFPCFPLAFPSLLNHDPSPNNPTFNFNQPHLDPLSFLPPYFPIAHFSASATGNSIQALG 68
           +PF  F  A    L     P N   + NQ   +       +FP+ +          + + 
Sbjct: 65  SPFSHFEFAPDCALLTSFHPENNGHDDNQTIPNDNHHPSLHFPLNNTIVEQPTEPSETIN 124

Query: 69  DIPSALTVGTGTGTRMGKK------DRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLG 128
            I  +  + T    +M K       DRHSKI TA+G RDRR+RLS+D+A++ F LQDMLG
Sbjct: 125 LIEDSQRISTSQDPKMKKAKKPSRTDRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDMLG 184

Query: 129 YDKASKTLEWLFGKSRKAIKELS 146
           +DKASKT+EWL  +++  I +++
Sbjct: 185 FDKASKTVEWLLTQAKPEIIKIA 207

[Close]

BLAST of CmaCh14G007990 vs. TAIR10
Match: AT2G31070.1 (AT2G31070.1 TCP domain protein 10)

HSP 1 Score: 75.5 bits (184), Expect = 6.0e-14
Identity = 35/73 (47.95%), Postives = 52/73 (71.23%), Query Frame = 1


Query: 85  GKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKEL 144
           G+KDRHSK++T++G RDRRVRLS   A +F+D+QD LGYD+ SK ++WL  K++ AI +L
Sbjct: 28  GRKDRHSKVFTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKTAIDKL 87

Query: 145 SRSKYGNVEDKEE 158
              +      ++E
Sbjct: 88  ELGETTTTTTRQE 100

[Close]

BLAST of CmaCh14G007990 vs. TAIR10
Match: AT3G15030.1 (AT3G15030.1 TCP family transcription factor 4)

HSP 1 Score: 74.7 bits (182), Expect = 1.0e-13
Identity = 36/70 (51.43%), Postives = 50/70 (71.43%), Query Frame = 1


Query: 85  GKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKEL 144
           G+KDRHSK+ TA+G RDRRVRLS   A +F+D+QD LG+D+ SK ++WL  K++ +I EL
Sbjct: 44  GRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSIDEL 103

Query: 145 SRSKYGNVED 155
           +     N  D
Sbjct: 104 AELPPWNPAD 113

[Close]

BLAST of CmaCh14G007990 vs. NCBI nr
Match: gi|659123314|ref|XP_008461599.1| (PREDICTED: transcription factor CYCLOIDEA, partial [Cucumis melo])

HSP 1 Score: 219.9 bits (559), Expect = 5.6e-54
Identity = 164/349 (46.99%), Postives = 190/349 (54.44%), Query Frame = 1


Query: 1   MASSSFNLNPFPCFP-------------LAFPSLLNHDPSPNNP-TFNFN-QPHLDPLSF 60
           M SSS+N NPFPCFP             L+ PSLLN DPS NN  T NF+ QPH DPLSF
Sbjct: 1   MGSSSYNPNPFPCFPSSSSSTTNSYNLPLSIPSLLNFDPSSNNTSTVNFHHQPHQDPLSF 60

Query: 61  LPPYFPIAHFSA-----------SATGNSIQALGDIPSALTVGTGTGTRMGKKDRHSKIY 120
           L PYFPIAHFS            +  GN+IQALGD+      G GT T MGKKDRHSKIY
Sbjct: 61  LAPYFPIAHFSTLTPPETAVINFAVAGNNIQALGDMVVPSAPGAGT-TGMGKKDRHSKIY 120

Query: 121 TAQGLRDRRVRLSIDIA-----------------------------RKFFDLQDMLGYDK 180
           TAQGLRDRRVRLSIDIA                              K       +G+  
Sbjct: 121 TAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSRKAIKELSRTKNVGFHG 180

Query: 181 ASKTLEWLFGKSRKAIK-------ELSRSKYGNVEDKEEDS-EKVEVFNLLAKESRAKAR 240
            +K L      S    +       EL       ++++E+ S EKVE+FNL+AKESRAKAR
Sbjct: 181 GAKKLSLAAASSDVEEEYDDDKGWELKMKSMLRIDEQEKVSKEKVEIFNLVAKESRAKAR 240

Query: 241 ARATDDDDDNDNDNDNDKKYYGHQMSHVEEVSDHW------STETSNLSMEEYSFMNKRR 279
           ARA   +   +    +D K YGHQ    +EVSDHW      STETSNLSMEE SFMNKR+
Sbjct: 241 ARAR--ERTMEKKQVDDSKVYGHQKGGAQEVSDHWSKHLNHSTETSNLSMEESSFMNKRK 300

[Close]

BLAST of CmaCh14G007990 vs. NCBI nr
Match: gi|778680634|ref|XP_011651364.1| (PREDICTED: transcription factor CYCLOIDEA [Cucumis sativus])

HSP 1 Score: 206.5 bits (524), Expect = 6.4e-50
Identity = 122/180 (67.78%), Postives = 131/180 (72.78%), Query Frame = 1


Query: 1   MASSSFNLNPFPCFPLA-------------FPSLLNHDPSPNNP-TFNFN-QPHLDPLSF 60
           M SS++NLNPF CFP +              PSLLN DPS +N  T NF+ QPH DPLSF
Sbjct: 1   MGSSNYNLNPFHCFPSSTSSTTNSYNLPPSIPSLLNSDPSSSNTSTINFHHQPHQDPLSF 60

Query: 61  LPPYFPIAHFSASA-----------TGNSIQALGD--IPSALTVGTGTGTRMGKKDRHSK 120
           L PYFPIAHFSA A            GN+IQALGD  IPSA   GT   T MGKKDRHSK
Sbjct: 61  LAPYFPIAHFSALAPPETAVINFAVAGNNIQALGDMVIPSAPGAGT---TGMGKKDRHSK 120

Query: 121 IYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELSRSKYGNV 153
           IYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLF KS+KAIKELSR+K GN+
Sbjct: 121 IYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRTKSGNL 177

[Close]

BLAST of CmaCh14G007990 vs. NCBI nr
Match: gi|700202598|gb|KGN57731.1| (hypothetical protein Csa_3G265270 [Cucumis sativus])

HSP 1 Score: 135.2 bits (339), Expect = 1.8e-28
Identity = 71/83 (85.54%), Postives = 74/83 (89.16%), Query Frame = 1


Query: 70  IPSALTVGTGTGTRMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKT 129
           IPSA   GT   T MGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKT
Sbjct: 3   IPSAPGAGT---TGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKT 62

Query: 130 LEWLFGKSRKAIKELSRSKYGNV 153
           LEWLF KS+KAIKELSR+K GN+
Sbjct: 63  LEWLFSKSKKAIKELSRTKSGNL 82

[Close]

BLAST of CmaCh14G007990 vs. NCBI nr
Match: gi|593331810|ref|XP_007139331.1| (hypothetical protein PHAVU_008G020400g [Phaseolus vulgaris])

HSP 1 Score: 120.9 bits (302), Expect = 3.5e-24
Identity = 96/215 (44.65%), Postives = 121/215 (56.28%), Query Frame = 1


Query: 2   ASSSFNLNPFPCFPLAFP-----SLLNHDPSPNN--PTFNFNQPHLDPLSFLPPYFPIAH 61
           +SSS + +P+P F    P     S   HDP      PT N++ P  + L+     + +A 
Sbjct: 17  SSSSSSTSPYPSFTFLHPENSSSSTFLHDPLSVTFIPT-NYHAPIPETLA----NWAVAD 76

Query: 62  FSASATGNSIQALGDIPSALTVGTGTGTRMGKKDRHSKIYTAQGLRDRRVRLSIDIARKF 121
           ++A+A  N  Q LG     +T      T   KKDRHSKI+T+QGLRDRRVRLSI+IARKF
Sbjct: 77  YAAAAMLN--QDLGGALYGITKKPAKKTT--KKDRHSKIHTSQGLRDRRVRLSIEIARKF 136

Query: 122 FDLQDMLGYDKASKTLEWLFGKSRKAIKELSRSKY------------GNV-----EDKEE 181
           FDLQDMLG+DKAS TL+WLF KS+KAIKEL+RSK+            G V     +DKE+
Sbjct: 137 FDLQDMLGFDKASNTLDWLFTKSKKAIKELTRSKHSVDSFEFSSSSDGEVVSVIHQDKEQ 196

Query: 182 D----------SEKVEVFNLLAKESRAKARARATD 183
                       E V       KESR KARARA +
Sbjct: 197 HQGVDLEEGKLKEPVYCVKAKMKESREKARARARE 222

[Close]

BLAST of CmaCh14G007990 vs. NCBI nr
Match: gi|38112222|gb|AAR11205.1| (CYCLOIDEA-like group 1B protein [Lupinus breweri var. breweri])

HSP 1 Score: 119.4 bits (298), Expect = 1.0e-23
Identity = 79/185 (42.70%), Postives = 103/185 (55.68%), Query Frame = 1


Query: 3   SSSFNLNPFPCFPLA------FPSLLNHDPSPNNPTFNFNQPHLDPLSFLPPYFPIAH-- 62
           S+  +  P+ C+  A      FP L   + S +N   N N  H DPL  +P   P  H  
Sbjct: 1   STYISSGPYSCYSSASNSYPFFPFLNPENASSSNNNNNHNLLH-DPLVHVPYNLPSHHHI 60

Query: 63  -----FSASATGNSIQALGDIPSALTVGTGTG---------------TRMGKKDRHSKIY 122
                   + T  ++  +  +P    + +G G                +  KKDRHSKIY
Sbjct: 61  HNTPIIQETLTNLAVSDVATMPKQDPIMSGGGGGGVQHHYGLSSLLTKKPAKKDRHSKIY 120

Query: 123 TAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELSRSKYGNVED 160
           T+QGLRDRRVRLSI+IARKFFDLQDMLG+DKAS TLEWLF KS++AIK+L+RSK  N  D
Sbjct: 121 TSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKRAIKDLARSKKSNGSD 180

The following BLAST results are available for this feature:

BLAST of CmaCh14G007990 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CYCLD_ANTMA	9.7e-22	54.76	Transcription factor CYCLOIDEA OS=Antirrhinum majus GN=CYC PE=1 SV=1	[more]
CYCLD_ANTML	9.7e-22	54.76	Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. linkianum ...	[more]
CYCLD_ANTMH	9.0e-20	67.09	Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. cirrhigeru...	[more]
TCP1_ARATH	9.0e-20	49.59	Transcription factor TCP1 OS=Arabidopsis thaliana GN=TCP1 PE=1 SV=1	[more]
TCP12_ARATH	6.5e-18	33.71	Transcription factor TCP12 OS=Arabidopsis thaliana GN=TCP12 PE=2 SV=1	[more]

BLAST of CmaCh14G007990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCE8_CUCSA	1.3e-28	85.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G265270 PE=4 SV=1	[more]
V7B185_PHAVU	2.5e-24	44.65	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G020400g PE=4 SV=1	[more]
Q6VM81_9FABA	7.2e-24	42.70	CYCLOIDEA-like group 1B protein (Fragment) OS=Lupinus breweri var. breweri PE=4 ...	[more]
Q6VM77_LUPDE	7.2e-24	44.69	CYCLOIDEA-like group 1B protein (Fragment) OS=Lupinus microcarpus var. densiflor...	[more]
Q6VM79_LUPDE	9.4e-24	44.69	CYCLOIDEA-like group 1B protein (Fragment) OS=Lupinus microcarpus var. densiflor...	[more]

BLAST of CmaCh14G007990 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G67260.1	5.1e-21	49.59	TCP family transcription factor	[more]
AT1G68800.1	3.6e-19	33.71	TCP domain protein 12	[more]
AT3G18550.1	6.0e-14	34.97	TCP family transcription factor	[more]
AT2G31070.1	6.0e-14	47.95	TCP domain protein 10	[more]
AT3G15030.1	1.0e-13	51.43	TCP family transcription factor 4	[more]

BLAST of CmaCh14G007990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659123314\|ref\|XP_008461599.1\|	5.6e-54	46.99	PREDICTED: transcription factor CYCLOIDEA, partial [Cucumis melo]	[more]
gi\|778680634\|ref\|XP_011651364.1\|	6.4e-50	67.78	PREDICTED: transcription factor CYCLOIDEA [Cucumis sativus]	[more]
gi\|700202598\|gb\|KGN57731.1\|	1.8e-28	85.54	hypothetical protein Csa_3G265270 [Cucumis sativus]	[more]
gi\|593331810\|ref\|XP_007139331.1\|	3.5e-24	44.65	hypothetical protein PHAVU_008G020400g [Phaseolus vulgaris]	[more]
gi\|38112222\|gb\|AAR11205.1\|	1.0e-23	42.70	CYCLOIDEA-like group 1B protein [Lupinus breweri var. breweri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005333	Transcription_factor_TCP
IPR017887	TF_TCP_subgr

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G007990.1	CmaCh14G007990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005333	Transcription factor, TCP	PFAM	PF03634	TCP	coord: 85..211 score: 7.1
IPR017887	Transcription factor TCP subgroup	PROFILE	PS51369	TCP	coord: 86..144 score: 35
None	No IPR available	PANTHER	PTHR31072	FAMILY NOT NAMED	coord: 56..180 score: 1.1
None	No IPR available	PANTHER	PTHR31072:SF18	TRANSCRIPTION FACTOR TCP1	coord: 56..180 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh14G007990	Cucsa.031600	Cucumber (Gy14) v1	cgycmaB0005
CmaCh14G007990	Cla007113	Watermelon (97103) v1	cmawmB244
CmaCh14G007990	Csa3G265270	Cucumber (Chinese Long) v2	cmacuB242
CmaCh14G007990	MELO3C023772	Melon (DHL92) v3.5.1	cmameB243
CmaCh14G007990	ClCG05G012030	Watermelon (Charleston Gray)	cmawcgB234
CmaCh14G007990	CSPI03G20460	Wild cucumber (PI 183967)	cmacpiB244
CmaCh14G007990	CmoCh01G004170	Cucurbita moschata (Rifu)	cmacmoB257
CmaCh14G007990	CmoCh14G008150	Cucurbita moschata (Rifu)	cmacmoB244
CmaCh14G007990	Lsi05G003980	Bottle gourd (USVL1VR-Ls)	cmalsiB249
CmaCh14G007990	Cp4.1LG02g17200	Cucurbita pepo (Zucchini)	cmacpeB279
CmaCh14G007990	Cp4.1LG03g06340	Cucurbita pepo (Zucchini)	cmacpeB283
CmaCh14G007990	MELO3C023772.2	Melon (DHL92) v3.6.1	cmamedB270
CmaCh14G007990	CsaV3_3G020440	Cucumber (Chinese Long) v3	cmacucB0281
CmaCh14G007990	Cla97C05G093940	Watermelon (97103) v2	cmawmbB264
CmaCh14G007990	Bhi01G001445	Wax gourd	cmawgoB0319
CmaCh14G007990	CsGy3G020180	Cucumber (Gy14) v2	cgybcmaB308
CmaCh14G007990	Carg07485	Silver-seed gourd	carcmaB1057
CmaCh14G007990	Carg22282	Silver-seed gourd	carcmaB0668

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh14G007990	CmaCh01G003930	Cucurbita maxima (Rimu)	cmacmaB255

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh14G007990	Melon (DHL92) v3.6.1	cmamedB274