CsGy3G014960 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G014960
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionPutative pentatricopeptide repeat-containing protein At3g16890, mitochondrial
LocationChr3 : 10999010 .. 11001103 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAGGGTTTCCTTCTTCGGCTTTCAGGGCAACGCCTGTTTTAAGAAATCGACCACTACAAGCTTACACTCCGATCAACAAACATCGGAGGCAATTACCATCCAATTCAATTCAACGAACTTCAAAACAAAGCCCCTTTAACAACCTTGAAGCGCCTTCGAGAGGTAATCCTTCCCCACTAACTACTCCGTTAAAGGCTCCCAGTTCGATTCAGCTTTCCACTCCTCCGTCTCTTGCTGATGATAAACATAGTTTGAGTCTTAAACCAATTGATCGTTCATATATTTCCAAGATTCTTTTAAGCAAAGACTGGTTTCTATTGTTAAATCACGAGTTTAAGGCGAAGAGGGTCGTTTTGTCTCCTCAATTTGTTGTTAGCATTTTGCAAAATCAAGACAACCCATTAAGTGCTATTAGGTTTTATATCTGGGTTTCGAATGTCGACCCTTTACTTGTAAAGAAACAACTGATTCAAGGGGTTCTTGTTCGCAACCTTCATCGAGAAGGCCCTGACCGTCCGGTGCTATTATCTGTTGATCTTCTTCAGCAAATTAAAGAGTCTGGTCTTAAAGTGACAGAGGAATTACTCTGTATATTATTTGGCAGTTGGGGTAGATTGGGTTTGGCAAATTACTGTGTAGAGGTATTTGGGCAAATTGGGTTGTTGGGTCTTAATCCCACCACCAGACTGTACAATGCTGTAATGGATGCATTGATCAAGTCCAATTCGTTAGACCTGGCGTATTTGAAATTTCAACAAATGTCATCCCATAACTGTGTCCCTGATAGGTTCACTTATAACATTCTCATCCATGGCGTTTGTAGGCTTGGGGTGGTGGATGAGGCACTTCGTTTGATGAAACAAATGGAGGGCTTGGGATATTTTCCGAATGTTTTCACATATACAATCTTGATTGATGGATTTTTCAATGCTAAAAGGGCTGGTGAAGCATTCAAAGTTTTGCAGACAATGAAGGAGAGGAATGTGGTTCCAAATGAAGCTACTATGAGATCCTTGGTTCATGGAGTTTTTCGTTGTATTGCTCCAGATAAGGCTTTTGAACTTTTGTTGGAATTTGTTGAGAGGAAGCAGGGCATAACTCAATTGGTTTGTGACAATATTCTTTATTGCCTTTCAAATAATTCTATGGCCAGTGAGGCTGTCATGTTTTTGATTAAAACTGGCAAGGAGGGTTATGTTCCGAGCAGTTCAACCTTCAATATCACCTTGGCGTGTGTATTAAAGAAGCTAGACTTGAAGGTAACATGCACTGTATTTGATAATTGTGTGCAGAGTGGTGTCAAGCCAGGGTTCAGTACATATCTTACGCTTATTGAAGCTTTGTATAAGGCAGGGAAAATGGAGATTGGAAACCGATATATGGATCGGTTAATAAATGATGGTCTTATTTCCAACATATATTCATATAACATGGTCATTGATTGCCTTTGCAAAGGCAAATCAATGGACAGAGCATCAGAAATGTTTAGGGATCTGCATAATAGAGGCATTTCTCCAAATATTGTTACTTATAATACACTTATCGGTGGGTTTTGCAGAAATGGGAATATGGACAAAGCTCAGGAACTTCTTGAAATGCTATTAGAATCTCGTTTTAGACCAGATATCTTCACATTTAATTCACTAATTGATGGACTCTGTCAAGCACATAAGCATGAGAATGCGTTTGGTTGTTTCACTGAAATGGTTGAGTGGGATGTCCCTCCAAATGTTATCACATATAATATATTGATATGTTCCTTCTGTGCGATTGGAGATGTTTCTAGATCTACTCATCTCTTGAGACAAATGAAACTGCATGGTATACAACCTGATACTTTCTCCTTCAATGCTCTTATCCAAGGGTACACTGGAAAGAATAGGTTTCAGAAGGCTGAGAAACTCTTTGATTCTATGTTAAGGTTGGGTATACAGCCTGACAATTATACATATGGTGCTCTTATTAAATCATTGTGCAAATCAGGTAGGCATGATAAAGCAAGGGAGATCTTTCTCTCAATGAAGGAGAATGGTTGTACTCCTGACTCTTATACTTGCAGTCTTTTTAGTGACACTCTTGCCCATAGTTAG

mRNA sequence

ATGCGAGGGTTTCCTTCTTCGGCTTTCAGGGCAACGCCTGTTTTAAGAAATCGACCACTACAAGCTTACACTCCGATCAACAAACATCGGAGGCAATTACCATCCAATTCAATTCAACGAACTTCAAAACAAAGCCCCTTTAACAACCTTGAAGCGCCTTCGAGAGGTAATCCTTCCCCACTAACTACTCCGTTAAAGGCTCCCAGTTCGATTCAGCTTTCCACTCCTCCGTCTCTTGCTGATGATAAACATAGTTTGAGTCTTAAACCAATTGATCGTTCATATATTTCCAAGATTCTTTTAAGCAAAGACTGGTTTCTATTGTTAAATCACGAGTTTAAGGCGAAGAGGGTCGTTTTGTCTCCTCAATTTGTTGTTAGCATTTTGCAAAATCAAGACAACCCATTAAGTGCTATTAGGTTTTATATCTGGGTTTCGAATGTCGACCCTTTACTTGTAAAGAAACAACTGATTCAAGGGGTTCTTGTTCGCAACCTTCATCGAGAAGGCCCTGACCGTCCGGTGCTATTATCTGTTGATCTTCTTCAGCAAATTAAAGAGTCTGGTCTTAAAGTGACAGAGGAATTACTCTGTATATTATTTGGCAGTTGGGGTAGATTGGGTTTGGCAAATTACTGTGTAGAGGTATTTGGGCAAATTGGGTTGTTGGGTCTTAATCCCACCACCAGACTGTACAATGCTGTAATGGATGCATTGATCAAGTCCAATTCGTTAGACCTGGCGTATTTGAAATTTCAACAAATGTCATCCCATAACTGTGTCCCTGATAGGTTCACTTATAACATTCTCATCCATGGCGTTTGTAGGCTTGGGGTGGTGGATGAGGCACTTCGTTTGATGAAACAAATGGAGGGCTTGGGATATTTTCCGAATGTTTTCACATATACAATCTTGATTGATGGATTTTTCAATGCTAAAAGGGCTGGTGAAGCATTCAAAGTTTTGCAGACAATGAAGGAGAGGAATGTGGTTCCAAATGAAGCTACTATGAGATCCTTGGTTCATGGAGTTTTTCGTTGTATTGCTCCAGATAAGGCTTTTGAACTTTTGTTGGAATTTGTTGAGAGGAAGCAGGGCATAACTCAATTGGTTTGTGACAATATTCTTTATTGCCTTTCAAATAATTCTATGGCCAGTGAGGCTGTCATGTTTTTGATTAAAACTGGCAAGGAGGGTTATGTTCCGAGCAGTTCAACCTTCAATATCACCTTGGCGTGTGTATTAAAGAAGCTAGACTTGAAGGTAACATGCACTGTATTTGATAATTGTGTGCAGAGTGGTGTCAAGCCAGGGTTCAGTACATATCTTACGCTTATTGAAGCTTTGTATAAGGCAGGGAAAATGGAGATTGGAAACCGATATATGGATCGGTTAATAAATGATGGTCTTATTTCCAACATATATTCATATAACATGGTCATTGATTGCCTTTGCAAAGGCAAATCAATGGACAGAGCATCAGAAATGTTTAGGGATCTGCATAATAGAGGCATTTCTCCAAATATTGTTACTTATAATACACTTATCGGTGGGTTTTGCAGAAATGGGAATATGGACAAAGCTCAGGAACTTCTTGAAATGCTATTAGAATCTCGTTTTAGACCAGATATCTTCACATTTAATTCACTAATTGATGGACTCTGTCAAGCACATAAGCATGAGAATGCGTTTGGTTGTTTCACTGAAATGGTTGAGTGGGATGTCCCTCCAAATGTTATCACATATAATATATTGATATGTTCCTTCTGTGCGATTGGAGATGTTTCTAGATCTACTCATCTCTTGAGACAAATGAAACTGCATGGTATACAACCTGATACTTTCTCCTTCAATGCTCTTATCCAAGGGTACACTGGAAAGAATAGGTTTCAGAAGGCTGAGAAACTCTTTGATTCTATGTTAAGGTTGGGTATACAGCCTGACAATTATACATATGGTGCTCTTATTAAATCATTGTGCAAATCAGGTAGGCATGATAAAGCAAGGGAGATCTTTCTCTCAATGAAGGAGAATGGTTGTACTCCTGACTCTTATACTTGCAGTCTTTTTAGTGACACTCTTGCCCATAGTTAG

Coding sequence (CDS)

ATGCGAGGGTTTCCTTCTTCGGCTTTCAGGGCAACGCCTGTTTTAAGAAATCGACCACTACAAGCTTACACTCCGATCAACAAACATCGGAGGCAATTACCATCCAATTCAATTCAACGAACTTCAAAACAAAGCCCCTTTAACAACCTTGAAGCGCCTTCGAGAGGTAATCCTTCCCCACTAACTACTCCGTTAAAGGCTCCCAGTTCGATTCAGCTTTCCACTCCTCCGTCTCTTGCTGATGATAAACATAGTTTGAGTCTTAAACCAATTGATCGTTCATATATTTCCAAGATTCTTTTAAGCAAAGACTGGTTTCTATTGTTAAATCACGAGTTTAAGGCGAAGAGGGTCGTTTTGTCTCCTCAATTTGTTGTTAGCATTTTGCAAAATCAAGACAACCCATTAAGTGCTATTAGGTTTTATATCTGGGTTTCGAATGTCGACCCTTTACTTGTAAAGAAACAACTGATTCAAGGGGTTCTTGTTCGCAACCTTCATCGAGAAGGCCCTGACCGTCCGGTGCTATTATCTGTTGATCTTCTTCAGCAAATTAAAGAGTCTGGTCTTAAAGTGACAGAGGAATTACTCTGTATATTATTTGGCAGTTGGGGTAGATTGGGTTTGGCAAATTACTGTGTAGAGGTATTTGGGCAAATTGGGTTGTTGGGTCTTAATCCCACCACCAGACTGTACAATGCTGTAATGGATGCATTGATCAAGTCCAATTCGTTAGACCTGGCGTATTTGAAATTTCAACAAATGTCATCCCATAACTGTGTCCCTGATAGGTTCACTTATAACATTCTCATCCATGGCGTTTGTAGGCTTGGGGTGGTGGATGAGGCACTTCGTTTGATGAAACAAATGGAGGGCTTGGGATATTTTCCGAATGTTTTCACATATACAATCTTGATTGATGGATTTTTCAATGCTAAAAGGGCTGGTGAAGCATTCAAAGTTTTGCAGACAATGAAGGAGAGGAATGTGGTTCCAAATGAAGCTACTATGAGATCCTTGGTTCATGGAGTTTTTCGTTGTATTGCTCCAGATAAGGCTTTTGAACTTTTGTTGGAATTTGTTGAGAGGAAGCAGGGCATAACTCAATTGGTTTGTGACAATATTCTTTATTGCCTTTCAAATAATTCTATGGCCAGTGAGGCTGTCATGTTTTTGATTAAAACTGGCAAGGAGGGTTATGTTCCGAGCAGTTCAACCTTCAATATCACCTTGGCGTGTGTATTAAAGAAGCTAGACTTGAAGGTAACATGCACTGTATTTGATAATTGTGTGCAGAGTGGTGTCAAGCCAGGGTTCAGTACATATCTTACGCTTATTGAAGCTTTGTATAAGGCAGGGAAAATGGAGATTGGAAACCGATATATGGATCGGTTAATAAATGATGGTCTTATTTCCAACATATATTCATATAACATGGTCATTGATTGCCTTTGCAAAGGCAAATCAATGGACAGAGCATCAGAAATGTTTAGGGATCTGCATAATAGAGGCATTTCTCCAAATATTGTTACTTATAATACACTTATCGGTGGGTTTTGCAGAAATGGGAATATGGACAAAGCTCAGGAACTTCTTGAAATGCTATTAGAATCTCGTTTTAGACCAGATATCTTCACATTTAATTCACTAATTGATGGACTCTGTCAAGCACATAAGCATGAGAATGCGTTTGGTTGTTTCACTGAAATGGTTGAGTGGGATGTCCCTCCAAATGTTATCACATATAATATATTGATATGTTCCTTCTGTGCGATTGGAGATGTTTCTAGATCTACTCATCTCTTGAGACAAATGAAACTGCATGGTATACAACCTGATACTTTCTCCTTCAATGCTCTTATCCAAGGGTACACTGGAAAGAATAGGTTTCAGAAGGCTGAGAAACTCTTTGATTCTATGTTAAGGTTGGGTATACAGCCTGACAATTATACATATGGTGCTCTTATTAAATCATTGTGCAAATCAGGTAGGCATGATAAAGCAAGGGAGATCTTTCTCTCAATGAAGGAGAATGGTTGTACTCCTGACTCTTATACTTGCAGTCTTTTTAGTGACACTCTTGCCCATAGTTAG

Protein sequence

MRGFPSSAFRATPVLRNRPLQAYTPINKHRRQLPSNSIQRTSKQSPFNNLEAPSRGNPSPLTTPLKAPSSIQLSTPPSLADDKHSLSLKPIDRSYISKILLSKDWFLLLNHEFKAKRVVLSPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVDLLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCSLFSDTLAHS
Homology
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BLAST of CsGy3G014960 vs. NCBI nr
Match: XP_011651072.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis sativus] >XP_011651073.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis sativus] >XP_011651074.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis sativus] >XP_011651075.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis sativus] >XP_011651076.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis sativus] >XP_004134500.2 PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis sativus] >KGN57153.1 hypothetical protein Csa_3G165700 [Cucumis sativus])

HSP 1 Score: 520.4 bits (1339), Expect = 9.5e-144
Identity = 430/431 (99.77%), Postives = 430/431 (99.77%), Query Frame = 0 

Query: 1   MRGFPSSAFRATPVLRNRPLQAYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP 60
           MRGFPSSAFRATPVLRNRPLQAYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP
Sbjct: 1   MRGFPSSAFRATPVLRNRPLQAYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP 60

Query: 61  LTTPLKAPSSIQLSTPPSLADDKHSLSLKPIDRSYISKILLSKDWFLLLNHEFKAKRVVL 120
           LTTPLKAPSSIQLSTPPSLADDKHSLSLKPIDRSYISKILLSKDWFLLLNHEFKAKRVVL
Sbjct: 61  LTTPLKAPSSIQLSTPPSLADDKHSLSLKPIDRSYISKILLSKDWFLLLNHEFKAKRVVL 120

Query: 121 SPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVD 180
           SPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVD
Sbjct: 121 SPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVD 180

Query: 181 LLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALI 240
           LLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALI
Sbjct: 181 LLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALI 240

Query: 241 KSNSLDLAYLKFQQMSSHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           KSNSLDLAYLKFQQMSSHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 KSNSLDLAYLKFQQMSSHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXGITQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDL 420
           XXXX GITQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDL
Sbjct: 361 XXXXQGITQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDL 420

Query: 421 KVTCTVFDNCV 432
           KVTCTVFDNCV
Sbjct: 421 KVTCTVFDNCV 431

[Close]
BLAST of CsGy3G014960 vs. NCBI nr
Match: XP_008438927.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis melo] >XP_008438928.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis melo] >XP_016898969.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis melo] >XP_016898970.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis melo])

HSP 1 Score: 376.7 bits (966), Expect = 1.7e-100
Identity = 204/260 (78.46%), Postives = 210/260 (80.77%), Query Frame = 0 

Query: 1   MRGFPSSAFRATPVLRNRPLQAYT-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 60
           MRGF S AFR TPVLRNRPLQAYT                                   S
Sbjct: 1   MRGFLSLAFRETPVLRNRPLQAYTPINNHRRQFPSDSIQRTSKQSSFNNIVEAPSRGNPS 60

Query: 61  PLTTPLKAPSSIQLSTPPSLADDKHSLSLKPIDRSYISKILLSKDWFLLLNHEFKAKRVV 120
           PLTTPLKA SSIQLST PSLADD+H    KPID SYISKILLSKDWFLLLNHEFKAKR+V
Sbjct: 61  PLTTPLKASSSIQLSTRPSLADDEH----KPIDHSYISKILLSKDWFLLLNHEFKAKRIV 120

Query: 121 LSPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSV 180
           LS QFVVSILQNQDNPL+AIRFYIWVSN DPLLVK Q+IQGVL RNL+REGPDRPVLLSV
Sbjct: 121 LSLQFVVSILQNQDNPLNAIRFYIWVSNADPLLVKGQVIQGVLGRNLYREGPDRPVLLSV 180

Query: 181 DLLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDAL 240
           DLLQQIKESGLKVTEELLCILFGSWGRLGLA YCVEVFGQIGLLGLNPTTRLYNAV+DAL
Sbjct: 181 DLLQQIKESGLKVTEELLCILFGSWGRLGLAKYCVEVFGQIGLLGLNPTTRLYNAVIDAL 240

Query: 241 IKSNSLDLAYLKFQQMSSHN 260
           IKSNSLDLAYLKFQQMSSHN
Sbjct: 241 IKSNSLDLAYLKFQQMSSHN 256

[Close]
BLAST of CsGy3G014960 vs. NCBI nr
Match: XP_022137852.1 (putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Momordica charantia] >XP_022137853.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Momordica charantia] >XP_022137854.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Momordica charantia] >XP_022137856.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Momordica charantia] >XP_022137857.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Momordica charantia] >XP_022137858.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Momordica charantia] >XP_022137859.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Momordica charantia] >XP_022137860.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Momordica charantia] >XP_022137861.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Momordica charantia] >XP_022137862.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Momordica charantia])

HSP 1 Score: 330.5 bits (846), Expect = 1.4e-86
Identity = 177/259 (68.34%), Postives = 196/259 (75.68%), Query Frame = 0 

Query: 1   MRGFPSSAFRATPVLRNRPLQAYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP 60
           MRG PSSAFRATPVLRNR                                        +P
Sbjct: 1   MRGLPSSAFRATPVLRNR-------------LTSKNRRQFPSNTIQRTSKQSPSRGNPAP 60

Query: 61  LTTPLKAPSSIQLSTPPSLADDKHSLSLKPIDRSYISKILLSKDWFLLLNHEFKAKRVVL 120
           L T LK P+ ++L  P  LA DK S SL+PID SYIS++L SKDW LLLNHEFKA R+VL
Sbjct: 61  LITHLKNPNLVRLPNPSPLA-DKLSSSLEPIDHSYISRVLSSKDWLLLLNHEFKASRIVL 120

Query: 121 SPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVD 180
           +PQFVVSILQNQ+NPL+AIRFYIWVSNVDPLL KKQ I+GVL RNL+R+GPDRP+LLSVD
Sbjct: 121 APQFVVSILQNQENPLNAIRFYIWVSNVDPLLAKKQAIRGVLGRNLYRKGPDRPMLLSVD 180

Query: 181 LLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALI 240
           LLQ+IKESGLKVTEELLCIL GSWGRLGLA YCVEVFGQIG +GLNP+TRLYNAV+DALI
Sbjct: 181 LLQEIKESGLKVTEELLCILIGSWGRLGLAKYCVEVFGQIGFMGLNPSTRLYNAVIDALI 240

Query: 241 KSNSLDLAYLKFQQMSSHN 260
           KSNSLDLAYLKFQQM SHN
Sbjct: 241 KSNSLDLAYLKFQQMPSHN 245

[Close]
BLAST of CsGy3G014960 vs. NCBI nr
Match: XP_022934625.1 (putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucurbita moschata])

HSP 1 Score: 310.8 bits (795), Expect = 1.1e-80
Identity = 193/248 (77.82%), Postives = 211/248 (85.08%), Query Frame = 0 

Query: 1   MRGFPSSAFRATPVLRNRPLQAYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP 60
           M+G  SS  RATPVLRNRP +AY+        XXXXXXXXXXXXXXXXXXXXXXXXXX  
Sbjct: 1   MKGLHSSGLRATPVLRNRPQEAYSTINEYRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  LTTPLKAPSSIQLSTPPSLADDKHSLSLKPIDRSYISKILLSKDWFLLLNHEFKAKRVVL 120
           LT+ L+  S I+  T       +HSL+LKPID SYIS+ILLSKDWFLLLNHEFKAKR+VL
Sbjct: 61  LTSQLENTSLIRHPT------REHSLNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLVL 120

Query: 121 SPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVD 180
           +PQFVVSILQNQ+NPL+AIRFYIWVSN+DP L KKQ I+GVL RNL+REGPDRPVLLSVD
Sbjct: 121 APQFVVSILQNQENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSVD 180

Query: 181 LLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALI 240
           LLQQIKESGLKVT+ELLCIL GSWGRLGLA YCVEVFGQI  LGLNPTTRLYNAV+DALI
Sbjct: 181 LLQQIKESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALI 240

Query: 241 KSNSLDLA 249
           KSNSLDLA
Sbjct: 241 KSNSLDLA 242

[Close]
BLAST of CsGy3G014960 vs. NCBI nr
Match: XP_023539285.1 (putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.1 bits (793), Expect = 1.9e-80
Identity = 196/248 (79.03%), Postives = 213/248 (85.89%), Query Frame = 0 

Query: 1   MRGFPSSAFRATPVLRNRPLQAYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP 60
           M+G  SS  RATPVLRNRP QAY+     XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  
Sbjct: 1   MKGLHSSGLRATPVLRNRPQQAYSTINEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  LTTPLKAPSSIQLSTPPSLADDKHSLSLKPIDRSYISKILLSKDWFLLLNHEFKAKRVVL 120
           LT+ L+  S I+  T       +HSL+LKPID SYIS+ILLSKDWFLLLNHEFKAKR+VL
Sbjct: 61  LTSQLENTSLIRHPT------REHSLNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLVL 120

Query: 121 SPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVD 180
            PQFVVSILQNQ+NPL+AIRFYIWVSN+DP L +KQ I+GVL RNL+REGPDRPVLLSVD
Sbjct: 121 DPQFVVSILQNQENPLNAIRFYIWVSNIDPSLAEKQSIRGVLGRNLYREGPDRPVLLSVD 180

Query: 181 LLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALI 240
           LLQQIKESGLKVT+ELLCIL GSWGRLGLA YCVEVFGQI  LGLNPTTRLYNAV+DALI
Sbjct: 181 LLQQIKESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALI 240

Query: 241 KSNSLDLA 249
           KSNSLDLA
Sbjct: 241 KSNSLDLA 242

[Close]
BLAST of CsGy3G014960 vs. TAIR10
Match: AT3G16890.1 (pentatricopeptide (PPR) domain protein 40)

HSP 1 Score: 205.7 bits (522), Expect = 9.4e-53
Identity = 103/197 (52.28%), Postives = 144/197 (73.10%), Query Frame = 0 

Query: 59  SPLTTPLKAPSSIQLSTP--PSLADDKHSLS--LKPIDRSYISKILLSKDWFLLLNHEFK 118
           S + T   A  S+  ST   P L+   +S      P+++ YIS+++  KDWFL+LN EF 
Sbjct: 9   SRIATAAAASKSLNASTSVNPKLSKTLNSSGKPTNPLNQRYISQVIERKDWFLILNQEFT 68

Query: 119 AKRVVLSPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRP 178
             R+ L+ +FV+S+LQNQDNPL ++RFY+WVSN DP+  K Q ++ VL   L R+G   P
Sbjct: 69  THRIGLNTRFVISVLQNQDNPLHSLRFYLWVSNFDPVYAKDQSLKSVLGNALFRKG---P 128

Query: 179 VLLSVDLLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNA 238
           +LLS++LL++I++SG ++++EL+C+L GSWGRLGLA YC +VF QI  LG+ P+TRLYNA
Sbjct: 129 LLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNA 188

Query: 239 VMDALIKSNSLDLAYLK 252
           V+DAL+KSNSLDLAYLK
Sbjct: 189 VIDALVKSNSLDLAYLK 202

[Close]
BLAST of CsGy3G014960 vs. TAIR10
Match: AT3G48810.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 54.7 bits (130), Expect = 2.7e-07
Identity = 37/126 (29.37%), Postives = 65/126 (51.59%), Query Frame = 0 

Query: 125 VVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVDLLQQ 184
           VV  L+ +     A+ F+  ++N + L     L   V++R L  +G    V     LLQQ
Sbjct: 46  VVKRLRQESCVPLALHFFKSIANSN-LFKHTPLTFEVMIRKLAMDGQVDSVQY---LLQQ 105

Query: 185 IKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALIKSNS 244
           +K  G   +E+L   +   + ++GLA   VE+F +I   G +P+ ++YN V+D L+  N 
Sbjct: 106 MKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENR 165

Query: 245 LDLAYL 251
           + + Y+
Sbjct: 166 IQMIYM 167

[Close]
BLAST of CsGy3G014960 vs. Swiss-Prot
Match: sp|Q9LSQ2|PP239_ARATH (Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PPR40 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.7e-51
Identity = 103/197 (52.28%), Postives = 144/197 (73.10%), Query Frame = 0 

Query: 59  SPLTTPLKAPSSIQLSTP--PSLADDKHSLS--LKPIDRSYISKILLSKDWFLLLNHEFK 118
           S + T   A  S+  ST   P L+   +S      P+++ YIS+++  KDWFL+LN EF 
Sbjct: 9   SRIATAAAASKSLNASTSVNPKLSKTLNSSGKPTNPLNQRYISQVIERKDWFLILNQEFT 68

Query: 119 AKRVVLSPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRP 178
             R+ L+ +FV+S+LQNQDNPL ++RFY+WVSN DP+  K Q ++ VL   L R+G   P
Sbjct: 69  THRIGLNTRFVISVLQNQDNPLHSLRFYLWVSNFDPVYAKDQSLKSVLGNALFRKG---P 128

Query: 179 VLLSVDLLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNA 238
           +LLS++LL++I++SG ++++EL+C+L GSWGRLGLA YC +VF QI  LG+ P+TRLYNA
Sbjct: 129 LLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNA 188

Query: 239 VMDALIKSNSLDLAYLK 252
           V+DAL+KSNSLDLAYLK
Sbjct: 189 VIDALVKSNSLDLAYLK 202

[Close]
BLAST of CsGy3G014960 vs. Swiss-Prot
Match: sp|Q9M302|PP270_ARATH (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX=3702 GN=At3g48810 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 4.8e-06
Identity = 37/126 (29.37%), Postives = 65/126 (51.59%), Query Frame = 0 

Query: 125 VVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVDLLQQ 184
           VV  L+ +     A+ F+  ++N + L     L   V++R L  +G    V     LLQQ
Sbjct: 46  VVKRLRQESCVPLALHFFKSIANSN-LFKHTPLTFEVMIRKLAMDGQVDSVQY---LLQQ 105

Query: 185 IKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALIKSNS 244
           +K  G   +E+L   +   + ++GLA   VE+F +I   G +P+ ++YN V+D L+  N 
Sbjct: 106 MKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENR 165

Query: 245 LDLAYL 251
           + + Y+
Sbjct: 166 IQMIYM 167

[Close]
BLAST of CsGy3G014960 vs. TrEMBL
Match: tr|A0A0A0L5W1|A0A0A0L5W1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G165700 PE=4 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 6.3e-144
Identity = 430/431 (99.77%), Postives = 430/431 (99.77%), Query Frame = 0 

Query: 1   MRGFPSSAFRATPVLRNRPLQAYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP 60
           MRGFPSSAFRATPVLRNRPLQAYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP
Sbjct: 1   MRGFPSSAFRATPVLRNRPLQAYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP 60

Query: 61  LTTPLKAPSSIQLSTPPSLADDKHSLSLKPIDRSYISKILLSKDWFLLLNHEFKAKRVVL 120
           LTTPLKAPSSIQLSTPPSLADDKHSLSLKPIDRSYISKILLSKDWFLLLNHEFKAKRVVL
Sbjct: 61  LTTPLKAPSSIQLSTPPSLADDKHSLSLKPIDRSYISKILLSKDWFLLLNHEFKAKRVVL 120

Query: 121 SPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVD 180
           SPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVD
Sbjct: 121 SPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVD 180

Query: 181 LLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALI 240
           LLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALI
Sbjct: 181 LLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALI 240

Query: 241 KSNSLDLAYLKFQQMSSHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           KSNSLDLAYLKFQQMSSHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 KSNSLDLAYLKFQQMSSHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXGITQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDL 420
           XXXX GITQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDL
Sbjct: 361 XXXXQGITQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDL 420

Query: 421 KVTCTVFDNCV 432
           KVTCTVFDNCV
Sbjct: 421 KVTCTVFDNCV 431

[Close]
BLAST of CsGy3G014960 vs. TrEMBL
Match: tr|A0A1S3AXI6|A0A1S3AXI6_CUCME (putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103483881 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 1.1e-100
Identity = 204/260 (78.46%), Postives = 210/260 (80.77%), Query Frame = 0 

Query: 1   MRGFPSSAFRATPVLRNRPLQAYT-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 60
           MRGF S AFR TPVLRNRPLQAYT                                   S
Sbjct: 1   MRGFLSLAFRETPVLRNRPLQAYTPINNHRRQFPSDSIQRTSKQSSFNNIVEAPSRGNPS 60

Query: 61  PLTTPLKAPSSIQLSTPPSLADDKHSLSLKPIDRSYISKILLSKDWFLLLNHEFKAKRVV 120
           PLTTPLKA SSIQLST PSLADD+H    KPID SYISKILLSKDWFLLLNHEFKAKR+V
Sbjct: 61  PLTTPLKASSSIQLSTRPSLADDEH----KPIDHSYISKILLSKDWFLLLNHEFKAKRIV 120

Query: 121 LSPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSV 180
           LS QFVVSILQNQDNPL+AIRFYIWVSN DPLLVK Q+IQGVL RNL+REGPDRPVLLSV
Sbjct: 121 LSLQFVVSILQNQDNPLNAIRFYIWVSNADPLLVKGQVIQGVLGRNLYREGPDRPVLLSV 180

Query: 181 DLLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDAL 240
           DLLQQIKESGLKVTEELLCILFGSWGRLGLA YCVEVFGQIGLLGLNPTTRLYNAV+DAL
Sbjct: 181 DLLQQIKESGLKVTEELLCILFGSWGRLGLAKYCVEVFGQIGLLGLNPTTRLYNAVIDAL 240

Query: 241 IKSNSLDLAYLKFQQMSSHN 260
           IKSNSLDLAYLKFQQMSSHN
Sbjct: 241 IKSNSLDLAYLKFQQMSSHN 256

[Close]
BLAST of CsGy3G014960 vs. TrEMBL
Match: tr|A0A2N9IWV6|A0A2N9IWV6_FAGSY (Non-specific serine/threonine protein kinase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56612 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 6.2e-67
Identity = 127/197 (64.47%), Postives = 161/197 (81.73%), Query Frame = 0 

Query: 59  SPLTTPLKAPSSIQLSTPPSLADDKHSLSLKPIDRSYISKILLSKDWFLLLNHEFKAKRV 118
           SPL +  + P+ + +S  P ++ DK  L++KPID  YIS++L  KDWFLLLNHE KA+R+
Sbjct: 53  SPLNSQFRNPNLVSISKTP-ISADKRKLTIKPIDHQYISQVLSRKDWFLLLNHEVKARRI 112

Query: 119 VLSPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLS 178
           +L+PQFVVS+LQNQ+NPL  ++FY+WVSN+DPL  K Q ++GVL   L+R+G   PV+LS
Sbjct: 113 ILNPQFVVSVLQNQENPLHPLKFYVWVSNIDPLFAKNQSVRGVLANALYRKG---PVVLS 172

Query: 179 VDLLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDA 238
           V+LLQ I+ SG +V+E+LLCIL GSWGRLGLANYC EVFGQI  LGL+PTTRLYNAV+DA
Sbjct: 173 VELLQDIRNSGFRVSEDLLCILIGSWGRLGLANYCAEVFGQISFLGLSPTTRLYNAVIDA 232

Query: 239 LIKSNSLDLAYLKFQQM 256
           LIK+NSLDLAYLKFQQM
Sbjct: 233 LIKANSLDLAYLKFQQM 245

[Close]
BLAST of CsGy3G014960 vs. TrEMBL
Match: tr|A0A061EQQ8|A0A061EQQ8_THECC (Pentatricopeptide (PPR) domain protein 40, putative OS=Theobroma cacao OX=3641 GN=TCM_021322 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 2.0e-65
Identity = 259/372 (69.62%), Postives = 295/372 (79.30%), Query Frame = 0 

Query: 60  PLTTPLKAPSSIQLSTPPSLADDKHSLSLKPIDRSYISKILLSKDWFLLLNHEFKAKRVV 119
           P  T +   S  + +TP        S     I+  YIS+IL   DWFLLLNHE KAKR+V
Sbjct: 22  PKNTTISCQSQFKSNTP---VPPPPSRGNSAINHHYISQILSRNDWFLLLNHELKAKRIV 81

Query: 120 LSPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSV 179
           L+PQFVVS+LQNQ+NPL  +RFYIWVSN+DPL  K Q ++GVL   L+R+G   PVLLSV
Sbjct: 82  LNPQFVVSLLQNQENPLYPLRFYIWVSNIDPLFAKNQSVKGVLATALYRKG---PVLLSV 141

Query: 180 DLLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDAL 239
           +L++ I+ SGL VTE+LLCIL GSWGRLGLA YC E+FGQI  LG++P+TRLYNAV+DAL
Sbjct: 142 ELVKDIRNSGLVVTEDLLCILIGSWGRLGLAKYCAEIFGQISFLGISPSTRLYNAVIDAL 201

Query: 240 IKSNSLDLAYLKFQQMSSHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 299
           IKSNSLDLAYLK        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 202 IKSNSLDLAYLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 261

Query: 300 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 359
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 262 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 321

Query: 360 XXXXXXGITQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLD 419
           XXXXXX      CD +LYCLSNNSMA EA +F+ K    GY+P +STFN+T+AC++K LD
Sbjct: 322 XXXXXXXXXXXXCDTLLYCLSNNSMAREAALFMKKLAGRGYLPDNSTFNLTMACLIKGLD 381

Query: 420 LKVTCTVFDNCV 432
           L  TC + D+ V
Sbjct: 382 LDETCLILDSFV 387

[Close]
BLAST of CsGy3G014960 vs. TrEMBL
Match: tr|A0A2K1ZF97|A0A2K1ZF97_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G108300v3 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 4.9e-64
Identity = 244/364 (67.03%), Postives = 283/364 (77.75%), Query Frame = 0 

Query: 72  QLSTPPSLADDK----HSLSLKPIDRSYISKILLSKDWFLLLNHEFKAKRVVLSPQFVVS 131
           QL+ P  L+  K    H+   + +DR YIS+IL   DWFLLLNHEFKAKR+ L+PQFVVS
Sbjct: 67  QLTKPNLLSVPKGHVSHNRDTRSVDRHYISRILSRNDWFLLLNHEFKAKRINLNPQFVVS 126

Query: 132 ILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVDLLQQIKE 191
           +LQNQ+NP+  +RFYIWVSNVDPL ++ Q ++GVL    +R+G   PV+LSVDLL+ I+ 
Sbjct: 127 VLQNQENPIYPLRFYIWVSNVDPLFIRNQAVKGVLANAFYRKG---PVVLSVDLLKDIRN 186

Query: 192 SGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDL 251
           SG +V E+LLC+L GSWGRLGLA YC E+FGQI  LG+ P+TRLYNAV+DAL+KSNSLDL
Sbjct: 187 SGFRVDEDLLCVLIGSWGRLGLAKYCEEIFGQISFLGITPSTRLYNAVIDALVKSNSLDL 246

Query: 252 AYLKFQQMSSHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 311
           AYLKF       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 247 AYLKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 306

Query: 312 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGI 371
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          +
Sbjct: 307 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIDFIEKEPVL 366

Query: 372 TQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDLKVTCTVF 431
            +L CD +L CLS   M  EA   L K G+ GY+P SSTFNIT+ C+LK LD+  TC + 
Sbjct: 367 GRLACDTLLCCLSEKCMPREAGALLRKLGERGYLPDSSTFNITMTCLLKGLDVNETCGIL 426

The following BLAST results are available for this feature:
BLAST of CsGy3G014960 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011651072.19.5e-14499.77PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitoc... [more]
XP_008438927.11.7e-10078.46PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitoc... [more]
XP_022137852.11.4e-8668.34putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [M... [more]
XP_022934625.11.1e-8077.82putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [C... [more]
XP_023539285.11.9e-8079.03putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [C... [more]
BLAST of CsGy3G014960 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G16890.19.4e-5352.28pentatricopeptide (PPR) domain protein 40[more]
AT3G48810.12.7e-0729.37Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CsGy3G014960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LSQ2|PP239_ARATH1.7e-5152.28Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS... [more]
sp|Q9M302|PP270_ARATH4.8e-0629.37Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX... [more]
BLAST of CsGy3G014960 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L5W1|A0A0A0L5W1_CUCSA6.3e-14499.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G165700 PE=4 SV=1[more]
tr|A0A1S3AXI6|A0A1S3AXI6_CUCME1.1e-10078.46putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS... [more]
tr|A0A2N9IWV6|A0A2N9IWV6_FAGSY6.2e-6764.47Non-specific serine/threonine protein kinase OS=Fagus sylvatica OX=28930 GN=FSB_... [more]
tr|A0A061EQQ8|A0A061EQQ8_THECC2.0e-6569.62Pentatricopeptide (PPR) domain protein 40, putative OS=Theobroma cacao OX=3641 G... [more]
tr|A0A2K1ZF97|A0A2K1ZF97_POPTR4.9e-6467.03Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G108300v3 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G014960.1CsGy3G014960.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 542..590
e-value: 7.4E-17
score: 61.2
coord: 262..310
e-value: 4.2E-15
score: 55.5
coord: 612..661
e-value: 1.9E-16
score: 59.8
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 232..260
e-value: 0.48
score: 10.7
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 469..499
e-value: 1.8E-5
score: 24.2
coord: 503..533
e-value: 1.3E-14
score: 53.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 615..648
e-value: 7.6E-8
score: 30.1
coord: 475..509
e-value: 1.5E-9
score: 35.4
coord: 650..684
e-value: 3.0E-11
score: 40.8
coord: 545..579
e-value: 2.5E-7
score: 28.5
coord: 300..334
e-value: 4.6E-8
score: 30.7
coord: 580..614
e-value: 1.3E-6
score: 26.2
coord: 510..544
e-value: 2.2E-8
score: 31.7
coord: 231..263
e-value: 1.7E-5
score: 22.7
coord: 265..299
e-value: 4.5E-8
score: 30.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 228..262
score: 9.372
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 578..612
score: 11.608
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 403..437
score: 6.752
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 613..647
score: 12.627
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 263..297
score: 12.869
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 333..363
score: 5.941
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 368..402
score: 5.821
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 473..507
score: 12.036
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 543..577
score: 11.794
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 508..542
score: 13.406
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 648..682
score: 13.932
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 193..227
score: 5.294
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 438..472
score: 7.596
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 298..332
score: 11.674
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 559..697
e-value: 5.1E-40
score: 139.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 151..289
e-value: 3.8E-20
score: 74.1
coord: 369..462
e-value: 6.2E-7
score: 31.1
coord: 290..365
e-value: 3.1E-16
score: 61.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 463..558
e-value: 7.0E-31
score: 109.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..81
NoneNo IPR availablePANTHERPTHR24015:SF1057SUBFAMILY NOT NAMEDcoord: 68..690
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 68..690
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 516..678

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G014960Csa3G165700Cucumber (Chinese Long) v2cgybcuB109
CsGy3G014960MELO3C006701Melon (DHL92) v3.5.1cgybmeB200
CsGy3G014960ClCG05G006410Watermelon (Charleston Gray)cgybwcgB203
CsGy3G014960CSPI03G14850Wild cucumber (PI 183967)cgybcpiB110
CsGy3G014960CmaCh00G004290Cucurbita maxima (Rimu)cgybcmaB274
CsGy3G014960CmaCh06G015540Cucurbita maxima (Rimu)cgybcmaB427
CsGy3G014960CmoCh06G015530Cucurbita moschata (Rifu)cgybcmoB401
CsGy3G014960Lsi05G015790Bottle gourd (USVL1VR-Ls)cgyblsiB184
CsGy3G014960Cp4.1LG08g05250Cucurbita pepo (Zucchini)cgybcpeB454
CsGy3G014960MELO3C006701.2Melon (DHL92) v3.6.1cgybmedB201
CsGy3G014960CsaV3_3G015050Cucumber (Chinese Long) v3cgybcucB117
CsGy3G014960Bhi01G000768Wax gourdcgybwgoB257
CsGy3G014960Carg23743Silver-seed gourdcarcgybB0939
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G014960Watermelon (97103) v2cgybwmbB196
CsGy3G014960Watermelon (97103) v2cgybwmbB222
CsGy3G014960Wax gourdcgybwgoB240
CsGy3G014960Cucumber (Gy14) v2cgybcgybB109
CsGy3G014960Cucurbita maxima (Rimu)cgybcmaB318
CsGy3G014960Cucurbita maxima (Rimu)cgybcmaB345
CsGy3G014960Cucurbita maxima (Rimu)cgybcmaB454
CsGy3G014960Cucurbita moschata (Rifu)cgybcmoB290
CsGy3G014960Cucurbita moschata (Rifu)cgybcmoB317
CsGy3G014960Cucurbita moschata (Rifu)cgybcmoB421
CsGy3G014960Cucurbita pepo (Zucchini)cgybcpeB303
CsGy3G014960Cucurbita pepo (Zucchini)cgybcpeB348
CsGy3G014960Cucurbita pepo (Zucchini)cgybcpeB406
CsGy3G014960Cucumber (Chinese Long) v2cgybcuB146
CsGy3G014960Bottle gourd (USVL1VR-Ls)cgyblsiB136
CsGy3G014960Melon (DHL92) v3.5.1cgybmeB149
CsGy3G014960Melon (DHL92) v3.6.1cgybmedB148
CsGy3G014960Watermelon (Charleston Gray)cgybwcgB230
CsGy3G014960Watermelon (97103) v1cgybwmB217
CsGy3G014960Watermelon (97103) v1cgybwmB262
CsGy3G014960Wild cucumber (PI 183967)cgybcpiB149
CsGy3G014960Silver-seed gourdcarcgybB0072
CsGy3G014960Silver-seed gourdcarcgybB0294
CsGy3G014960Silver-seed gourdcarcgybB0700
CsGy3G014960Cucumber (Chinese Long) v3cgybcucB149