CmoCh06G015530 (gene) Cucurbita moschata (Rifu)

NameCmoCh06G015530
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCmo_Chr06 : 10920331 .. 10926850 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGGGCTTCATTCTTCGGGTCTCAGGGCGACGCCTGTTCTAAGAAATCGACCTCAAGAAGCTTACTCCACGATTAACGAGTATCGGAGACGAAACCCTTCGAACACAGTCCACAGAACTTCAAAACACAACCCCTTGAACAACACTGAAGCGCCTTCAAGAGGTAATCCTTACCCACTAACTAGTCAATTAGAGAATACCAGCTTGATTCGGCACCCCACTCGTGAACATAGTTTGAATCTTAAACCAATTGATCATTCATATATTTCTAGGATTCTATTGAGCAAGGACTGGTTTCTATTGCTAAACCACGAGTTTAAGGCGAAGAGGCTCGTTTTGGCTCCTCAATTTGTTGTTAGTATTTTGCAAAATCAAGAAAACCCATTAAATGCTATAAGATTTTATATCTGGGTTTCGAATATCGACCCTTCACTTGCAAAGAAACAATCGATTCGAGGGGTTCTTGGCCGCAACCTTTATCGAGAAGGTCCTGATCGTCCGGTGTTATTGTCAGTTGATCTACTTCAGCAAATTAAAGAGTCTGGTCTTAAAGTGACACAGGAATTGCTTTGTATATTACTTGGAAGTTGGGGTAGATTGGGTTTGGCAAAATACTGTGTGGAAGTATTTGGGCAAATTTCGTTTCTGGGACTTAATCCCACCACCAGACTGTACAATGCTGTAATTGATGCATTGATCAAGTCCAATTCTCTGGACTTGGCTTATTTAAAATTTCAGCAAATGTCGTCTCATAACTGCGTTCCTGATAGGTTCACTTACAACATTCTCATCCATGGTGTTTGTAGGCTTGGGGTGGTGGATGAGGCACTTCGTTTGATGAAACAAATGGAGGGCTTGGGATATTTTCCGAATGTGTTCACGTATACGATCTTGATTGATGGATTTTTCAATGCCATGAGGGCTGAGGAAGCCTTTGGAGTTTTACAGACAATGAAGGAGAGGAATGTGGTTCCAAATGCAGCAACTATGAGATCCCTGGTTCATGGAGTATTTCGTTGTTGTGCCCCGGATAAAGCTTTTGAATATTTATTGGACTTTGTCGAGAAGAAGCCAGGCGTGTCTCAATTGGTCTGTGACAATATTCTTTACTGCCTTTCAAATAATTCTATGGCCAGTGAGGCTGTTATGTTTTTGAGTAAAATGGGGAAGAAAGGTTATGTTCCGGATAGTTCAACCTTTAATGTCACTATGGCATGTGTATTAAATAAGCTAGACCAGAAAGAAGCTTGTGATATATTCGATAATTGTACACAGAGAGGTGTCAAGCCAGGGTTCAGTACATATCTTGCGCTTATTGAAGCTCTGTACAAGGCGGGGAAAACGGAGATTGGAAACAAATATATGGATCGAATAATAAAGGATGGTCTTGTTTCGAACAACTATTCATATAATATGGTCATTGATTGCCTTTGCAAAGGCAAATTAATGGACAGAGCAGCAGAAATCTTTAGGGATCTGCAGTCTAAAGGCATTTCTCCAAATATTGTAACTTTTAATACACTTATTAGTGGGTATTGCAGAAATGGAGGTATGGACAAAGCTCAGGAATTTCTTGAAATGCTATTAGAATGTCGTTTTAGACCGGATATCTTCACTTTTAATTCAGTAATTGATGGCCTCTGCCAAGCACACAAGTACGAAGATGCTTTTGGTTGTTTCAATGAAATGGTCGAGTGGGATGTCACTCCAAATGCTATCACGTATAATATATTGATACGCTCCTTTTGTGCGATTGGAAATGTTGCTAGATCTACTCAACTCTTGAGAAAAATGCAACTTCACGGTATACAACCCGATACTTTTTCCTTCAATGCTCTTATCCAAAGCTACTTTCGAATGAATAAAGTTCATAAAGCTGAGAAGCTTTTTGATTCAATGTTAAGGTTGGGTATACAGCCTGACAATTATACTTATGGTGCTTTTATTAAGTCTTTGTGCAAGTCAGGTAGGCATGATGAAGTAAGGGAGATGTTTCTCTCAATGAAGGTGAATGGTTGTACTCCTGACTCTTATACTTGCAGTCTTATTAACGCCCATATTTAAATCTTTACTTGATCTTTATGTGAATGCTGAGGAAATTGTGGAGATTGAAGAAAATATGTGAACAAGAACATTTTATGAACAGCTTGGACATCGGGTATTGGCCGTTTATTGGTACTGATACCTTGATGTTTTCAGATATGAATTGTTTCAAGTACTGTCAAAATAAAAAATGTCCGTTGTTGTAGAGAGAGGAGAACGGGCGATTCACTTTCTATTTGATGTTAACAAGCAGTCTGATGAGTTCTTAGACGCCACGTCAAATACAGTCTTTCTGAACTAATCAAGGAACATATCCGCAGTTATTAAAAAGGGTCATGGCTTTTTACTAAATCTTGATGCTTGGCCGTGAATATGCTAAAACTTAAGGTGCCATCATATTTCATTTGCAGGCACACTTTGGTGTGTAGTACGGCACAGTCACCTTGAACAGAGTAGTTGAAACTCCAAGGTTTAGGGGATGAAACTTACCATCTGCCCCCTACATCGACCCCATGGTACAATGTAAGGTTTCAGAATTTGGCAGGATTTTCAATACTGTAGCCATGGAGTTTCTTCGAGGACGGGAAAAACACAAAGGCTTCTATGATGGATATTCATCTGTGATTCATGTGACCTCGATACTTTATCTGTTGCCAATGTGAAATGGCGAGCAGGTGTTATCTTCCTATGTATTTATTTGAAAAGAAGTCCAACGTTGAAGAATTTTTACTGATTTCTCTGTAACTACTAACCTAGGCTTGATTTGAGGACTGGACACTCCAAGACAGTTGGGAAATTCTGAAACCATTTCTTGTGCTATTCCATTTCCCCCTTTTCTGTTTATCATGTCAGAATGATGAATGACATAAAAAGGACTTGACATGGCTGTTTCTATTGGCTTTTGAAGGGAGATTTGGTCTGTCAATTTCGCATCTAGCTCTTATGATGGAGATAACACAATGTTAAAGTTTTTCTATTAGCTTTCCCGCCATGAAATTGTAACAGCCCAAGCCCACCGCTAGCAGATATTGTCCTCATTGGGCTTTTCCTTTTGGGCTTCCCCACAAAGTTTTTAAAACACGTATGCTAGGGAGAGGTTTCTACACTCTTATAAAGAATGTTTTGTTCTCCTCTTCAACCGATGTGAGATCTCATAAGTAGAATAGGTAGGTTGTTGTATAGGGATTATAAATTCTTACTTTTAACTAGAATTCATATAATTTCCATTTGATTGTAGCTAATGCTTTTGATAGGTTAAGTGGATAACGTTGCATATACAGTGGGTGCCACACGTTTTGACCCCGTTGAAACTTTCTCCAAGAACTTGCTGTGTTTGGATCTTGTCTAGACGCTGTCCATGGGATAGAGGTAACATACTCTGATGACACAACACACTACTTGCGGTCTGTTTAAAAGCAGCCCACTGTACTTACGAATTAAATCAGCTCATTGTACTTTCTTCTATATGAATTAACTTCAACCCATTGAGTACGGAAAAAAAACTGAACCTGGGATAGGTATTATATACAACAAAAGACTGATATTAAACATATTTTGCTTGTAGCTGTACTAGTTGATAGGAGGGTGGTGGATTAATATTCACGTCGTATAGCCATTGTATGTTCTCTAGTTGGTCTGCACTCTGCAGTAGGTTTCTCGAATCAAATGCTTAATGTTCTCTTTTATACTTGTTCATTCTTAAATGAAAGGTGTTTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGCTATTAGCTAAANAGCCACTTATCATGTTCTTGGGTTGATGTGGAATGACCTTTTGCCTTTCAGATATCTTGAAATGCCTCTTAGGTCATAATTGTAAAACTTTGTTTCGGGATAGGTTGAAAAAGTTCCAAACAAACCGGTCAGAGATTCGAATCTCACCCTACAACAGATTTTTACCTCAGGAAAGGACCATTTTTTCTTGGGAAGGGTAAAATACTTTAATCAAGTCCATGCACACAATTCTTCTGTACTTTCTATTCTGTTTCGAAATTCTGACTGATATTGAATAGAAAACTCGAGAGGGTTAACAGAGTTTTTTTTTTATGGAAGGTTGTGGTAAAAGGGGTTGGTCCCATTTAGTTAGTTGGAGGTCAGTGTCAAGATCTCTTTGTGTGTGTGTGTGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTCAAGGTCCTCTAAGTGGTTATGGTGGTGTTTTCCCCCCTCTGAAACCACAATCATTGTGGTATTGGATCACAGATTCACAATTAGTAGATATGAGGTTAACCCCATTGGTTTCGATTTCAATGAGGGGTCTAATAACTACGGCGAACCTGCATAAATCGTTCGCTCAGCGTTTCCTCTGTACACTTGGTTTCTCTATAATGATGGTAGCAGAATCAGTCTTAAAGGGTTTTACTTTTCTTGTTTCATTCCTCCTGTAAGCTATAGGAAGTCCAACTTTAGAAAAAGCTATGTCTTTTAATGCCTTGTTGCCCTTTGAATGATACCTTTGATTTCACTCAGGGGGCCTCGGCTCTTTTACTTCACTTGCAATGGTGTGTTCTTTATAAGAAGGCGTGGGGAGATTTGAATCATTTATTATCAAGGTTGATGTTCCTTTTCTATTGAGGTTCGACGTTGTGACACGACAGACATAATTTGTCCATCCTCTCTTGAAAAGTGGTCTCTTTGCTCTTCTGTGAAGTATTTGGTTGGAAAGAAACTAGAGGTCTTCTTCAGATGATGAGAATTCTTGCCCTGCTTTAATGAATCGATCTGGTTCCATACTTCACTACCTTTTTATAGTTGTCACGCACTTTTTCTATCAATATCTGGCCTCCTTTCTGTACCTTTGCATTTCATTTAATTTTTGTTGCCCTAGTGTTGGCCTGACCACTCTTCCGCGAGGCTGCATGTGAGATCCAACGTCAATTGAGGAGAAGAATGAAACATTCTTTATATGGGTGTAAAAACCTCTCCCTAGTAGACACGTTTTAAAAACTTTGAGGAGAAAACCCGAAGAGGACAATATCTGCAAACGGTTGGCTTGGGTTGTTACAAATAGTATCAGAGTCAGACACCGGGCAATGTGTTAGCGAGGAGGCTAAGCTCCAAAGGGGTGTGGACACGAAGTAGTGTGCTAGCAAGGACGCTGGACTCTATAGGGGGGTGAATTGGGGGGGTCCCACATTGATGTGAGAAGGGAACAAGTGCCAGCGAGGACGCTGGACCTTGAAGGGGGTGGATTGTGAGATCTCATATCGGTTGAGTAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTTTCTAGTAGACGTGTTTTGAAAACCTTGAGGGGAAAGCTCGAAAGAGAAAGCCCAAAAAGGATAAGGGTCAGCTATCATCAACTTGTTGTTGCTGACAAAACAACGTTTCAGTGTATTGATGTCTAGCGACTGATATTCCTTCGCTTTTGAGGGAATACTTGTCTGTTTGCTAAATCTGGACCACTGCATTGATCCCTTTGATTCTACCTTTCTGCAAGTGGGTTTATATTTAATATACTTGCTTGCCAAATTGAATTCTTTCACCGTTGTTTAGGTTGGAGAGTCAGTGAGAAACTTTATGAGTTCTCTTTTTAACATCCATTTTTTCAGGGATAGCTATTCTCCATAATGGGGGTGAATTTAGTTGGCGCTCGAGCGAGTGGTTGGGTTATTTCACTCGATCATAATGTCTTGACGTGACAGCAAAACGCCTCGACATCACGAGTCGATCAGTTTGCTTCTCAGCCAAGTTTGCTTCGATGTGATGAGCTCGACCCGAGCGGTAGGAAATGAAAAGAAGGCTGCAAAACTTTGTAAAATCTTCTATCAAACTACGACGTTTCTTATCCATAGAGATGGTTTGACTGAATCAAGCTCATTCAAGCACACTCGCAAAACGATGAAGGATTTTTATTGAGACATAACAAGCAAGACTCGTAGAAGATCGATATTGAGTGATTATTCATATGACATTGCGAAGATAGGAACAAAAGTATTTGTAGTAGCCATTTGAGTGAGTTTGAAGATCAACATTATGACGTTTCAAATCATCTCAATTGGAAGTATTGTGTAAGCTGATATTCTAATTATAGTTTGTGAGTGATACAAAAGTTGAGACCATTTCTTCTAAGTTAGGGTCGGAGGAAGAGTTTTTCGACACGTGAAAAATGATTGTCCTAATAAAGTAGGTTTGTCAAAGGGC

mRNA sequence

ATGAAGGGGCTTCATTCTTCGGGTCTCAGGGCGACGCCTGTTCTAAGAAATCGACCTCAAGAAGCTTACTCCACGATTAACGAGTATCGGAGACGAAACCCTTCGAACACAGTCCACAGAACTTCAAAACACAACCCCTTGAACAACACTGAAGCGCCTTCAAGAGGTAATCCTTACCCACTAACTAGTCAATTAGAGAATACCAGCTTGATTCGGCACCCCACTCGTGAACATAGTTTGAATCTTAAACCAATTGATCATTCATATATTTCTAGGATTCTATTGAGCAAGGACTGGTTTCTATTGCTAAACCACGAGTTTAAGGCGAAGAGGCTCGTTTTGGCTCCTCAATTTGTTGTTAGTATTTTGCAAAATCAAGAAAACCCATTAAATGCTATAAGATTTTATATCTGGGTTTCGAATATCGACCCTTCACTTGCAAAGAAACAATCGATTCGAGGGGTTCTTGGCCGCAACCTTTATCGAGAAGGTCCTGATCGTCCGGTGTTATTGTCAGTTGATCTACTTCAGCAAATTAAAGAGTCTGGTCTTAAAGTGACACAGGAATTGCTTTGTATATTACTTGGAAGTTGGGGTAGATTGGGTTTGGCAAAATACTGTGTGGAAGTATTTGGGCAAATTTCGTTTCTGGGACTTAATCCCACCACCAGACTGTACAATGCTGTAATTGATGCATTGATCAAGTCCAATTCTCTGGACTTGGCTTATTTAAAATTTCAGCAAATGTCGTCTCATAACTGCGTTCCTGATAGGTTCACTTACAACATTCTCATCCATGGTGTTTGTAGGCTTGGGGTGGTGGATGAGGCACTTCGTTTGATGAAACAAATGGAGGGCTTGGGATATTTTCCGAATGTGTTCACGTATACGATCTTGATTGATGGATTTTTCAATGCCATGAGGGCTGAGGAAGCCTTTGGAGTTTTACAGACAATGAAGGAGAGGAATGTGGTTCCAAATGCAGCAACTATGAGATCCCTGGTTCATGGAGTATTTCGTTGTTGTGCCCCGGATAAAGCTTTTGAATATTTATTGGACTTTGTCGAGAAGAAGCCAGGCGTGTCTCAATTGGTCTGTGACAATATTCTTTACTGCCTTTCAAATAATTCTATGGCCAGTGAGGCTGTTATGTTTTTGAGTAAAATGGGGAAGAAAGGTTATGTTCCGGATAGTTCAACCTTTAATGTCACTATGGCATGTGTATTAAATAAGCTAGACCAGAAAGAAGCTTGTGATATATTCGATAATTGTACACAGAGAGGTGTCAAGCCAGGGTTCAGTACATATCTTGCGCTTATTGAAGCTCTGTACAAGGCGGGGAAAACGGAGATTGGAAACAAATATATGGATCGAATAATAAAGGATGGTCTTGTTTCGAACAACTATTCATATAATATGGTCATTGATTGCCTTTGCAAAGGCAAATTAATGGACAGAGCAGCAGAAATCTTTAGGGATCTGCAGTCTAAAGGCATTTCTCCAAATATTGTAACTTTTAATACACTTATTAGTGGGTATTGCAGAAATGGAGGTATGGACAAAGCTCAGGAATTTCTTGAAATGCTATTAGAATGTCGTTTTAGACCGGATATCTTCACTTTTAATTCAGTAATTGATGGCCTCTGCCAAGCACACAAGTACGAAGATGCTTTTGGTTGTTTCAATGAAATGGTCGAGTGGGATGTCACTCCAAATGCTATCACGTATAATATATTGATACGCTCCTTTTGTGCGATTGGAAATGTTGCTAGATCTACTCAACTCTTGAGAAAAATGCAACTTCACGGTATACAACCCGATACTTTTTCCTTCAATGCTCTTATCCAAAGCTACTTTCGAATGAATAAAGTTCATAAAGCTGAGAAGCTTTTTGATTCAATGTTAAGGGATAGCTATTCTCCATAATGGGGGTGAATTTAGTTGGCGCTCGAGCGAGTGGTTGGGTTATTTCACTCGATCATAATGTCTTGACGTGACAGCAAAACGCCTCGACATCACGAGTCGATCAGTTTGCTTCTCAGCCAAGTTTGCTTCGATGTGATGAGCTCGACCCGAGCGGTAGGAAATGAAAAGAAGGCTGCAAAACTTTGTAAAATCTTCTATCAAACTACGACGTTTCTTATCCATAGAGATGGTTTGACTGAATCAAGCTCATTCAAGCACACTCGCAAAACGATGAAGGATTTTTATTGAGACATAACAAGCAAGACTCGTAGAAGATCGATATTGAGTGATTATTCATATGACATTGCGAAGATAGGAACAAAAGTATTTGTAGTAGCCATTTGAGTGAGTTTGAAGATCAACATTATGACGTTTCAAATCATCTCAATTGGAAGTATTGTGTAAGCTGATATTCTAATTATAGTTTGTGAGTGATACAAAAGTTGAGACCATTTCTTCTAAGTTAGGGTCGGAGGAAGAGTTTTTCGACACGTGAAAAATGATTGTCCTAATAAAGTAGGTTTGTCAAAGGGC

Coding sequence (CDS)

ATGAAGGGGCTTCATTCTTCGGGTCTCAGGGCGACGCCTGTTCTAAGAAATCGACCTCAAGAAGCTTACTCCACGATTAACGAGTATCGGAGACGAAACCCTTCGAACACAGTCCACAGAACTTCAAAACACAACCCCTTGAACAACACTGAAGCGCCTTCAAGAGGTAATCCTTACCCACTAACTAGTCAATTAGAGAATACCAGCTTGATTCGGCACCCCACTCGTGAACATAGTTTGAATCTTAAACCAATTGATCATTCATATATTTCTAGGATTCTATTGAGCAAGGACTGGTTTCTATTGCTAAACCACGAGTTTAAGGCGAAGAGGCTCGTTTTGGCTCCTCAATTTGTTGTTAGTATTTTGCAAAATCAAGAAAACCCATTAAATGCTATAAGATTTTATATCTGGGTTTCGAATATCGACCCTTCACTTGCAAAGAAACAATCGATTCGAGGGGTTCTTGGCCGCAACCTTTATCGAGAAGGTCCTGATCGTCCGGTGTTATTGTCAGTTGATCTACTTCAGCAAATTAAAGAGTCTGGTCTTAAAGTGACACAGGAATTGCTTTGTATATTACTTGGAAGTTGGGGTAGATTGGGTTTGGCAAAATACTGTGTGGAAGTATTTGGGCAAATTTCGTTTCTGGGACTTAATCCCACCACCAGACTGTACAATGCTGTAATTGATGCATTGATCAAGTCCAATTCTCTGGACTTGGCTTATTTAAAATTTCAGCAAATGTCGTCTCATAACTGCGTTCCTGATAGGTTCACTTACAACATTCTCATCCATGGTGTTTGTAGGCTTGGGGTGGTGGATGAGGCACTTCGTTTGATGAAACAAATGGAGGGCTTGGGATATTTTCCGAATGTGTTCACGTATACGATCTTGATTGATGGATTTTTCAATGCCATGAGGGCTGAGGAAGCCTTTGGAGTTTTACAGACAATGAAGGAGAGGAATGTGGTTCCAAATGCAGCAACTATGAGATCCCTGGTTCATGGAGTATTTCGTTGTTGTGCCCCGGATAAAGCTTTTGAATATTTATTGGACTTTGTCGAGAAGAAGCCAGGCGTGTCTCAATTGGTCTGTGACAATATTCTTTACTGCCTTTCAAATAATTCTATGGCCAGTGAGGCTGTTATGTTTTTGAGTAAAATGGGGAAGAAAGGTTATGTTCCGGATAGTTCAACCTTTAATGTCACTATGGCATGTGTATTAAATAAGCTAGACCAGAAAGAAGCTTGTGATATATTCGATAATTGTACACAGAGAGGTGTCAAGCCAGGGTTCAGTACATATCTTGCGCTTATTGAAGCTCTGTACAAGGCGGGGAAAACGGAGATTGGAAACAAATATATGGATCGAATAATAAAGGATGGTCTTGTTTCGAACAACTATTCATATAATATGGTCATTGATTGCCTTTGCAAAGGCAAATTAATGGACAGAGCAGCAGAAATCTTTAGGGATCTGCAGTCTAAAGGCATTTCTCCAAATATTGTAACTTTTAATACACTTATTAGTGGGTATTGCAGAAATGGAGGTATGGACAAAGCTCAGGAATTTCTTGAAATGCTATTAGAATGTCGTTTTAGACCGGATATCTTCACTTTTAATTCAGTAATTGATGGCCTCTGCCAAGCACACAAGTACGAAGATGCTTTTGGTTGTTTCAATGAAATGGTCGAGTGGGATGTCACTCCAAATGCTATCACGTATAATATATTGATACGCTCCTTTTGTGCGATTGGAAATGTTGCTAGATCTACTCAACTCTTGAGAAAAATGCAACTTCACGGTATACAACCCGATACTTTTTCCTTCAATGCTCTTATCCAAAGCTACTTTCGAATGAATAAAGTTCATAAAGCTGAGAAGCTTTTTGATTCAATGTTAAGGGATAGCTATTCTCCATAA
BLAST of CmoCh06G015530 vs. Swiss-Prot
Match: PP239_ARATH (Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS=Arabidopsis thaliana GN=PPR40 PE=3 SV=1)

HSP 1 Score: 662.5 bits (1708), Expect = 4.6e-189
Identity = 319/580 (55.00%), Postives = 422/580 (72.76%), Query Frame = 1

Query: 67  NTSLIRHPTREHSLN-----LKPIDHSYISRILLSKDWFLLLNHEFKAKRLVLAPQFVVS 126
           N S   +P    +LN       P++  YIS+++  KDWFL+LN EF   R+ L  +FV+S
Sbjct: 22  NASTSVNPKLSKTLNSSGKPTNPLNQRYISQVIERKDWFLILNQEFTTHRIGLNTRFVIS 81

Query: 127 ILQNQENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSVDLLQQIKE 186
           +LQNQ+NPL+++RFY+WVSN DP  AK QS++ VLG  L+R+GP   +LLS++LL++I++
Sbjct: 82  VLQNQDNPLHSLRFYLWVSNFDPVYAKDQSLKSVLGNALFRKGP---LLLSMELLKEIRD 141

Query: 187 SGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKSNSLDL 246
           SG +++ EL+C+L+GSWGRLGLAKYC +VF QISFLG+ P+TRLYNAVIDAL+KSNSLDL
Sbjct: 142 SGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDL 201

Query: 247 AYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILID 306
           AYLKFQQM S  C PDRFTYNILIHGVC+ GVVDEA+RL+KQME  G  PNVFTYTILID
Sbjct: 202 AYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILID 261

Query: 307 GFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDFVEKKPGV 366
           GF  A R +EA   L+ M+ R + PN AT+R+ VHG+FRC  P KAFE L+ F+EK   +
Sbjct: 262 GFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNL 321

Query: 367 SQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQKEACDIF 426
            ++  D +LYCLSNNSMA E   FL K+G++GY+PDSSTFN  M+C+L   D  E C IF
Sbjct: 322 QRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIF 381

Query: 427 DNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMVIDCLCKG 486
           D    RGVKPGF+ YL L++AL  A +   G++Y+ ++  DGL+S+ YSYN VIDCLCK 
Sbjct: 382 DGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKA 441

Query: 487 KLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPDIFTF 546
           + ++ AA    ++Q +GISPN+VTFNT +SGY   G + K    LE LL   F+PD+ TF
Sbjct: 442 RRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITF 501

Query: 547 NSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLRKMQL 606
           + +I+ LC+A + +DAF CF EM+EW + PN ITYNILIRS C+ G+  RS +L  KM+ 
Sbjct: 502 SLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKE 561

Query: 607 HGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP 642
           +G+ PD +++NA IQS+ +M KV KAE+L  +MLR    P
Sbjct: 562 NGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKP 598

BLAST of CmoCh06G015530 vs. Swiss-Prot
Match: RF1_ORYSI (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.7e-56
Identity = 136/493 (27.59%), Postives = 239/493 (48.48%), Query Frame = 1

Query: 156 LGRNLYREGPDRPVLLSVDLLQQIKESGLKVTQELLC---ILLGSWGRLGLAKYCVEVFG 215
           L R L     D P   +V    ++  +G       LC   IL+G   R G         G
Sbjct: 53  LNRALADVARDSPAA-AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALG 112

Query: 216 QISFLGLNPTTRLYNAVIDALIKSN-SLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRL 275
            +   G       +  ++  L     + D   +  ++M+   C+P+ F+YNIL+ G+C  
Sbjct: 113 NVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDE 172

Query: 276 GVVDEALRLMKQM---EGLGYFPNVFTYTILIDGFFNAMRAEEAFGVLQTMKERNVVPNA 335
               EAL L+  M    G G  P+V +YT +I+GFF    +++A+     M +R ++P+ 
Sbjct: 173 NRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDV 232

Query: 336 ATMRSLVHGVFRCCAPDKAFEYLLDFVEKKPGVSQLVCDNILYCLSNNSMASEAVMFLSK 395
            T  S++  + +  A DKA E L   V+       +  ++IL+   ++    EA+ FL K
Sbjct: 233 VTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKK 292

Query: 396 MGKKGYVPDSSTFNVTMACVLNKLDQKEACDIFDNCTQRGVKPGFSTYLALIEALYKAGK 455
           M   G  PD  T+++ M  +       EA  IFD+ T+RG+KP  +TY  L++     G 
Sbjct: 293 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 352

Query: 456 TEIGNKYMDRIIKDGLVSNNYSYNMVIDCLCKGKLMDRAAEIFRDLQSKGISPNIVTFNT 515
               +  +D ++++G+  ++Y ++++I    K   +D+A  +F  ++ +G++PN VT+  
Sbjct: 353 LVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA 412

Query: 516 LISGYCRNGGMDKAQEFLEMLLECRFRPDIFTFNSVIDGLCQAHKYEDAFGCFNEMVEWD 575
           +I   C++G ++ A  + E +++    P    +NS+I GLC  +K+E A     EM++  
Sbjct: 413 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 472

Query: 576 VTPNAITYNILIRSFCAIGNVARSTQLLRKMQLHGIQPDTFSFNALIQSYFRMNKVHKAE 635
           +  N I +N +I S C  G V  S +L   M   G++P+  ++N LI  Y    K+ +A 
Sbjct: 473 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 532

Query: 636 KLFDSMLRDSYSP 642
           KL   M+     P
Sbjct: 533 KLLSGMVSVGLKP 544

BLAST of CmoCh06G015530 vs. Swiss-Prot
Match: PPR38_ARATH (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 6.0e-56
Identity = 127/472 (26.91%), Postives = 233/472 (49.36%), Query Frame = 1

Query: 171 LSVDLLQQIKESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVI 230
           L +D  +Q++ +G+      L I++  + R     +   V G++  LG  P T  +N +I
Sbjct: 106 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI 165

Query: 231 DALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYF 290
             L     +  A +   +M  + C PD  TYN +++G+CR G    AL L+++ME     
Sbjct: 166 KGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVK 225

Query: 291 PNVFTYTILIDGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEY 350
            +VFTY+ +ID        + A  + + M+ + +  +  T  SLV G+ +    +     
Sbjct: 226 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL 285

Query: 351 LLDFVEKKPGVSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMA--CV 410
           L D V ++   + +  + +L          EA     +M  +G  P+  T+N  M   C+
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345

Query: 411 LNKLDQKEACDIFDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNN 470
            N+L   EA ++ D   +    P   T+ +LI+      + + G K    I K GLV+N 
Sbjct: 346 QNRLS--EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA 405

Query: 471 YSYNMVIDCLCKGKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEM 530
            +Y++++   C+   +  A E+F+++ S G+ P+++T+  L+ G C NG ++KA E  E 
Sbjct: 406 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 465

Query: 531 LLECRFRPDIFTFNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGN 590
           L + +    I  + ++I+G+C+  K EDA+  F  +    V PN +TY ++I   C  G+
Sbjct: 466 LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 525

Query: 591 VARSTQLLRKMQLHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYS 641
           ++ +  LLRKM+  G  P+  ++N LI+++ R   +  + KL + M    +S
Sbjct: 526 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575

BLAST of CmoCh06G015530 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 3.0e-55
Identity = 119/458 (25.98%), Postives = 230/458 (50.22%), Query Frame = 1

Query: 187 TQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKSN-SLDLAYLK 246
           T  +  +++ S+ RL L    + +       G  P    YNAV+DA I+S  ++  A   
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192

Query: 247 FQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFN 306
           F++M      P+ FTYNILI G C  G +D AL L  +ME  G  PNV TY  LIDG+  
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252

Query: 307 AMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDFVEKKPGVSQLV 366
             + ++ F +L++M  + + PN  +   +++G+ R     +    L +   +   + ++ 
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312

Query: 367 CDNIL--YCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQKEACDIFDN 426
            + ++  YC   N    +A++  ++M + G  P   T+   +  +    +   A +  D 
Sbjct: 313 YNTLIKGYCKEGNF--HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 372

Query: 427 CTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMVIDCLCKGKL 486
              RG+ P   TY  L++   + G      + +  +  +G   +  +YN +I+  C    
Sbjct: 373 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 432

Query: 487 MDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPDIFTFNS 546
           M+ A  +  D++ KG+SP++V+++T++SG+CR+  +D+A      ++E   +PD  T++S
Sbjct: 433 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 492

Query: 547 VIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLRKMQLHG 606
           +I G C+  + ++A   + EM+   + P+  TY  LI ++C  G++ ++ QL  +M   G
Sbjct: 493 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 552

Query: 607 IQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP 642
           + PD  +++ LI    + ++  +A++L   +  +   P
Sbjct: 553 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP 588

BLAST of CmoCh06G015530 vs. Swiss-Prot
Match: PPR91_ARATH (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 216.5 bits (550), Expect = 8.7e-55
Identity = 128/466 (27.47%), Postives = 218/466 (46.78%), Query Frame = 1

Query: 171 LSVDLLQQIKESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVI 230
           L++ +L ++ + G +     L  LL  +         V +  Q+   G  P T  +N +I
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193

Query: 231 DALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYF 290
             L   N    A     +M +  C PD  TY ++++G+C+ G  D A  L+ +ME     
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 253

Query: 291 PNVFTYTILIDGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEY 350
           P V  Y  +IDG       ++A  + + M+ + + PN  T  SL+  +        A   
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313

Query: 351 LLDFVEKKPGVSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFN--VTMACV 410
           L D +E+K          ++          EA     +M K+   P   T++  +   C+
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373

Query: 411 LNKLDQKEACDIFDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNN 470
            ++LD  EA  +F+    +   P   TY  LI+   K  + E G +    + + GLV N 
Sbjct: 374 HDRLD--EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 433

Query: 471 YSYNMVIDCLCKGKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEM 530
            +YN++I  L +    D A EIF+++ S G+ PNI+T+NTL+ G C+NG ++KA    E 
Sbjct: 434 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 493

Query: 531 LLECRFRPDIFTFNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGN 590
           L   +  P I+T+N +I+G+C+A K ED +  F  +    V P+ + YN +I  FC  G+
Sbjct: 494 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 553

Query: 591 VARSTQLLRKMQLHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSM 635
              +  L ++M+  G  P++  +N LI++  R      + +L   M
Sbjct: 554 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597

BLAST of CmoCh06G015530 vs. TrEMBL
Match: A0A0A0L5W1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G165700 PE=4 SV=1)

HSP 1 Score: 1059.3 bits (2738), Expect = 1.9e-306
Identity = 521/647 (80.53%), Postives = 570/647 (88.10%), Query Frame = 1

Query: 1   MKGLHSSGLRATPVLRNRPQEAYSTINEYRRRNPSNTVHRTSKHNPLNNTEAPSRGNPYP 60
           M+G  SS  RATPVLRNRP +AY+ IN++RR+ PSN++ RTSK +P NN EAPSRGNP P
Sbjct: 1   MRGFPSSAFRATPVLRNRPLQAYTPINKHRRQLPSNSIQRTSKQSPFNNLEAPSRGNPSP 60

Query: 61  LTSQLENTSLIRHPTR------EHSLNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLVL 120
           LT+ L+  S I+  T       +HSL+LKPID SYIS+ILLSKDWFLLLNHEFKAKR+VL
Sbjct: 61  LTTPLKAPSSIQLSTPPSLADDKHSLSLKPIDRSYISKILLSKDWFLLLNHEFKAKRVVL 120

Query: 121 APQFVVSILQNQENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSVD 180
           +PQFVVSILQNQ+NPL+AIRFYIWVSN+DP L KKQ I+GVL RNL+REGPDRPVLLSVD
Sbjct: 121 SPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVD 180

Query: 181 LLQQIKESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALI 240
           LLQQIKESGLKVT+ELLCIL GSWGRLGLA YCVEVFGQI  LGLNPTTRLYNAV+DALI
Sbjct: 181 LLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALI 240

Query: 241 KSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVF 300
           KSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVF
Sbjct: 241 KSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVF 300

Query: 301 TYTILIDGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDF 360
           TYTILIDGFFNA RA E F VLQTMKERNVVPN ATMRSLVHGVFRC APDKAFE LL+F
Sbjct: 301 TYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMRSLVHGVFRCIAPDKAFELLLEF 360

Query: 361 VEKKPGVSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQ 420
           VE+K G++QLVCDNILYCLSNNSMASEAVMFL K GK+GYVP SSTFN+T+ACVL KLD 
Sbjct: 361 VERKQGITQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDL 420

Query: 421 KEACDIFDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMV 480
           K  C +FDNC Q GVKPGFSTYL LIEALYKAGK EIGN+YMDR+I DGL+SN YSYNMV
Sbjct: 421 KVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMV 480

Query: 481 IDCLCKGKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRF 540
           IDCLCKGK MDRA+E+FRDL ++GISPNIVT+NTLI G+CRNG MDKAQE LEMLLE RF
Sbjct: 481 IDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRF 540

Query: 541 RPDIFTFNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQ 600
           RPDIFTFNS+IDGLCQAHK+E+AFGCF EMVEWDV PN ITYNILI SFCAIG+V+RST 
Sbjct: 541 RPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTH 600

Query: 601 LLRKMQLHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP 642
           LLR+M+LHGIQPDTFSFNALIQ Y   N+  KAEKLFDSMLR    P
Sbjct: 601 LLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQP 647

BLAST of CmoCh06G015530 vs. TrEMBL
Match: A0A061EQQ8_THECC (Pentatricopeptide (PPR) domain protein 40, putative OS=Theobroma cacao GN=TCM_021322 PE=4 SV=1)

HSP 1 Score: 790.0 bits (2039), Expect = 2.1e-225
Identity = 382/575 (66.43%), Postives = 468/575 (81.39%), Query Frame = 1

Query: 67  NTSLIRHPTREHSLNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLVLAPQFVVSILQNQ 126
           NT +   P+R +S     I+H YIS+IL   DWFLLLNHE KAKR+VL PQFVVS+LQNQ
Sbjct: 36  NTPVPPPPSRGNSA----INHHYISQILSRNDWFLLLNHELKAKRIVLNPQFVVSLLQNQ 95

Query: 127 ENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSVDLLQQIKESGLKV 186
           ENPL  +RFYIWVSNIDP  AK QS++GVL   LYR+GP   VLLSV+L++ I+ SGL V
Sbjct: 96  ENPLYPLRFYIWVSNIDPLFAKNQSVKGVLATALYRKGP---VLLSVELVKDIRNSGLVV 155

Query: 187 TQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKSNSLDLAYLKF 246
           T++LLCIL+GSWGRLGLAKYC E+FGQISFLG++P+TRLYNAVIDALIKSNSLDLAYLKF
Sbjct: 156 TEDLLCILIGSWGRLGLAKYCAEIFGQISFLGISPSTRLYNAVIDALIKSNSLDLAYLKF 215

Query: 247 QQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNA 306
           QQMS+ NC PDRFTYNILIHGVCR GVVDEALRL+KQMEGLGY PNV+TYTILIDGF NA
Sbjct: 216 QQMSADNCKPDRFTYNILIHGVCRTGVVDEALRLVKQMEGLGYSPNVYTYTILIDGFCNA 275

Query: 307 MRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDFVEKKPGVSQLVC 366
            R +EAF +++ MK+RNV+PN AT+RSL+HGVFRC AP +AFE L+ F+EK+P + +L C
Sbjct: 276 RRVDEAFRLVEMMKKRNVIPNEATVRSLIHGVFRCVAPHEAFELLIMFLEKEPMMQKLAC 335

Query: 367 DNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQKEACDIFDNCTQ 426
           D +LYCLSNNSMA EA +F+ K+  +GY+PD+STFN+TMAC++  LD  E C I D+  +
Sbjct: 336 DTLLYCLSNNSMAREAALFMKKLAGRGYLPDNSTFNLTMACLIKGLDLDETCLILDSFVE 395

Query: 427 RGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMVIDCLCKGKLMDR 486
            GVK GF+TYLALI+ALY  GK   G++Y+D++ KDGL++N +SYNMVID  CK  +MDR
Sbjct: 396 LGVKLGFNTYLALIQALYNIGKFVEGDQYLDQMAKDGLLANVFSYNMVIDSFCKASMMDR 455

Query: 487 AAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPDIFTFNSVID 546
           A + FR++  +GI+P +VTFNT+ISG+C+ G + KA+EFL MLLE  F PDIFTF+S+ID
Sbjct: 456 ARKTFREMYLRGIAPTLVTFNTIISGHCKIGEVHKAKEFLVMLLESGFDPDIFTFSSLID 515

Query: 547 GLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLRKMQLHGIQP 606
           GLC+AH  +DAF CF+EM +WDVTPN +TYNILIRS CAIG+VAR+ +LLRKMQ  GI  
Sbjct: 516 GLCRAHMIDDAFDCFSEMFQWDVTPNDVTYNILIRSLCAIGDVARAMKLLRKMQATGINA 575

Query: 607 DTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP 642
           D FSFNALIQS+ RM K+ KAEKLF+SMLR    P
Sbjct: 576 DIFSFNALIQSFCRMKKIEKAEKLFNSMLRLGLDP 603

BLAST of CmoCh06G015530 vs. TrEMBL
Match: F6H743_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01320 PE=4 SV=1)

HSP 1 Score: 766.9 bits (1979), Expect = 1.9e-218
Identity = 385/644 (59.78%), Postives = 484/644 (75.16%), Query Frame = 1

Query: 1   MKGLHSSGLRATPVLRNRPQEAYSTINEYRRRNPSNTVHRTSKH-NPLNNTEAPSRGNPY 60
           M+GL S   RA+P ++N  +EAY+   ++ + NP+    + + +  P +    PSRG   
Sbjct: 1   MRGL-SLASRASPAIKNLSEEAYNH-RKFNKENPTKRKPKAALNPRPTDKLATPSRGKSG 60

Query: 61  PLTSQLENTSLIRHPTREHS--LNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLVLAPQ 120
             +  L   S    P  +H+    +K IDH YIS IL  +DWFLL+NHE+KAKR+ L P+
Sbjct: 61  SKSPSLFFNS--NSPISDHNQEFRVKSIDHQYISEILSREDWFLLINHEYKAKRISLNPR 120

Query: 121 FVVSILQNQENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSVDLLQ 180
            VVSILQNQENPL  +RFY+WV  I+P LAK QS+R  L   L R+GP   V+LSV+LLQ
Sbjct: 121 LVVSILQNQENPLYPLRFYVWVLKINPLLAKNQSVRVALANVLNRKGP---VILSVELLQ 180

Query: 181 QIKESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKSN 240
            I+ SG  +T++LLCIL+GSWGR GLAKYC EVFGQ+SFLGL+P+TRLYNAVIDAL+KSN
Sbjct: 181 DIRNSGCAITEDLLCILIGSWGRFGLAKYCAEVFGQVSFLGLSPSTRLYNAVIDALVKSN 240

Query: 241 SLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYT 300
           SLDLAYLKFQQMS  NC PDRFTYNILIHGVCR+GVVDEALRL+KQME L   PNVFTYT
Sbjct: 241 SLDLAYLKFQQMSLDNCNPDRFTYNILIHGVCRIGVVDEALRLVKQMESLDCSPNVFTYT 300

Query: 301 ILIDGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDFVEK 360
           ILIDGF NA R +EAF VL+TMK RNV P+ AT RSLVHG+FR   P KAFE L  F+EK
Sbjct: 301 ILIDGFCNARRFDEAFRVLETMKGRNVSPSDATFRSLVHGLFRSIDPSKAFELLSRFLEK 360

Query: 361 KPGVSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQKEA 420
           +  + ++VCD IL CLSN+ M  EA +FL K  +K Y PDSSTFN+ + C++ +LD  E 
Sbjct: 361 EAVLPKVVCDTILCCLSNSKMPKEAALFLRKAQEKSYFPDSSTFNIIITCLIRELDVNET 420

Query: 421 CDIFDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMVIDC 480
           C+I D+  ++G+KP F+TY++LIEAL+KAG+   GN+Y++ +++ GLVSN +SYNMVIDC
Sbjct: 421 CEILDSFVEQGLKPCFNTYISLIEALFKAGRDGEGNRYLNEMVQVGLVSNAFSYNMVIDC 480

Query: 481 LCKGKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPD 540
            CK  +MDRA+E FR+++  GI PNIVTFNTLI+GY +NG + KA+  LEMLLE  F+P+
Sbjct: 481 FCKAGMMDRASETFREMKESGIDPNIVTFNTLINGYSKNGEIGKARALLEMLLEYGFKPN 540

Query: 541 IFTFNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLR 600
           IFTF+S+IDGLC+AH+  DAF CFNEMVEW V PN +TYNILIRS C +G+VA+S +LLR
Sbjct: 541 IFTFSSMIDGLCRAHQISDAFNCFNEMVEWGVAPNVVTYNILIRSLCVVGDVAKSMKLLR 600

Query: 601 KMQLHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP 642
           +MQ +GI PD FSFNALIQS+ RMNKV KA+ LF SML    SP
Sbjct: 601 RMQANGISPDVFSFNALIQSFCRMNKVEKAQNLFVSMLALGLSP 637

BLAST of CmoCh06G015530 vs. TrEMBL
Match: B9RZM2_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0999800 PE=4 SV=1)

HSP 1 Score: 765.0 bits (1974), Expect = 7.3e-218
Identity = 376/602 (62.46%), Postives = 459/602 (76.25%), Query Frame = 1

Query: 39  HRTSKHNPLNNTEAPSRGNP---YPLTSQLENTSLIRHPTREHSLNL--KPIDHSYISRI 98
           H  S  N ++ TEA   GN    Y L  Q  N + ++      S N   KPIDH Y SRI
Sbjct: 31  HFKSAQNHISKTEASLGGNSDTHYLLNPQFTNPNSLKISNNPISANKYSKPIDHHYFSRI 90

Query: 99  LLSKDWFLLLNHEFKAKRLVLAPQFVVSILQNQENPLNAIRFYIWVSNIDPSLAKKQSIR 158
           L   DWFLLLNHEFKAKR+ L    V S+LQNQENPL  ++FYIWVSN+DP  AK QS++
Sbjct: 91  LSRHDWFLLLNHEFKAKRITLNSHSVASVLQNQENPLYPLKFYIWVSNMDPLFAKDQSVK 150

Query: 159 GVLGRNLYREGPDRPVLLSVDLLQQIKESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQ 218
           GVL   LYR+GP   V+LSV+LL+ IK SG ++ +ELLCIL+GSWGRLGLAKYC E+FGQ
Sbjct: 151 GVLANCLYRKGP---VVLSVELLKDIKASGYRINEELLCILIGSWGRLGLAKYCDEIFGQ 210

Query: 219 ISFLGLNPTTRLYNAVIDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGV 278
           ISFLG++P+TRLYNAVIDAL+KSNSLDLAYLKFQQMS+ NC PDRFTYNILIHGVCR GV
Sbjct: 211 ISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGV 270

Query: 279 VDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAMRAEEAFGVLQTMKERNVVPNAATMRS 338
           VDEALRL+KQMEGLGY PNVFTYTILIDGFFNA + +EAF VL+TMK R V P+ AT+RS
Sbjct: 271 VDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRS 330

Query: 339 LVHGVFRCCAPDKAFEYLLDFVEKKPGVSQLVCDNILYCLSNNSMASEAVMFLSKMGKKG 398
            +HGVFRC AP+KAFE  ++F+E++P + +L CD +L CLS+ +MA EA   L K GK G
Sbjct: 331 FIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIG 390

Query: 399 YVPDSSTFNVTMACVLNKLDQKEACDIFDNCTQRGVKPGFSTYLALIEALYKAGKTEIGN 458
           + PDS+TFN+ M C++   D  E C+I D   ++G+K GFSTYLALI+ALY AGK   GN
Sbjct: 391 HKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGN 450

Query: 459 KYMDRIIKDGLVSNNYSYNMVIDCLCKGKLMDRAAEIFRDLQSKGISPNIVTFNTLISGY 518
            Y ++++KDGL+ N  SYNMVIDC CK  +MD+A   F+++Q KGI PN+VTFNTLI GY
Sbjct: 451 HYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGY 510

Query: 519 CRNGGMDKAQEFLEMLLECRFRPDIFTFNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNA 578
           C+ G + K+++ L MLLE  F+PDIFTF+S+IDGLC+A + EDA GCF+EMV W ++PNA
Sbjct: 511 CKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNA 570

Query: 579 ITYNILIRSFCAIGNVARSTQLLRKMQLHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDS 636
           +TYNILI S C IG+V RS +LLRKMQ  GI PD FSFNALIQS+ RM KV  A+KLF S
Sbjct: 571 VTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSS 629

BLAST of CmoCh06G015530 vs. TrEMBL
Match: W9RIC1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007742 PE=4 SV=1)

HSP 1 Score: 761.5 bits (1965), Expect = 8.1e-217
Identity = 371/636 (58.33%), Postives = 475/636 (74.69%), Query Frame = 1

Query: 1   MKGLHSSGLRATPVLRNRPQEAYSTINEYRRRNPSNTVHRTSKHNPLNNTEAPSRGNPYP 60
           M+G  S   RA+P +                RNPS+  H                 NP P
Sbjct: 21  MRGFSSLASRASPAVL---------------RNPSHKPH-----------------NPVP 80

Query: 61  LTSQLENTSLIRHPTREHSLNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLVLAPQFVV 120
           +  Q++  +  ++ T     N   +DH YI+R+L S DW +LL HE K+KR+ L P+FVV
Sbjct: 81  IKPQIQVPTPGKNNTNN---NNSLVDHRYITRVLSSHDWVVLLTHELKSKRVSLNPRFVV 140

Query: 121 SILQNQENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSVDLLQQIK 180
           S+LQNQENPL  +RFY+WVS++DPSL + QS+R VLG   YR GP   V+LSVDL+++IK
Sbjct: 141 SVLQNQENPLLPLRFYLWVSSVDPSLTRNQSVRRVLGNAFYRNGP---VVLSVDLVKEIK 200

Query: 181 ESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKSNSLD 240
           +SG  V+++LLC+L+GSWGRLGLAKYCVEVFGQISFLGL+P+TRLYNAVIDAL+KSNSLD
Sbjct: 201 KSGFSVSEDLLCVLIGSWGRLGLAKYCVEVFGQISFLGLSPSTRLYNAVIDALVKSNSLD 260

Query: 241 LAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILI 300
           LAYLKFQQM+S NCVPDRFTYNILIHGVC++GVVDEALRL+KQME +GY PNVFTYTILI
Sbjct: 261 LAYLKFQQMTSDNCVPDRFTYNILIHGVCKVGVVDEALRLVKQMESVGYCPNVFTYTILI 320

Query: 301 DGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDFVEKKPG 360
           DGF N+ R EEAFGVL+TMKERNV PN AT+RSLVHGVFRC +P KA E L  FVEK+  
Sbjct: 321 DGFCNSKRVEEAFGVLETMKERNVRPNEATIRSLVHGVFRCVSPRKAVELLFRFVEKESL 380

Query: 361 VSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQKEACDI 420
            S+  CD IL+CL+NNSMA EA  FL + G KGY+PDSSTFN+ + C++  LD  E  +I
Sbjct: 381 YSRSACDTILFCLANNSMAREASEFLREAGLKGYLPDSSTFNMAITCLIKDLDANETHEI 440

Query: 421 FDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMVIDCLCK 480
           F+N  +RGVKPGFSTYLAL+EA+Y+ G+ E+G++++D +IKDGLVSN YSYNMVIDC C+
Sbjct: 441 FENFVERGVKPGFSTYLALVEAMYEGGRVEVGDEFLDEMIKDGLVSNVYSYNMVIDCFCR 500

Query: 481 GKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPDIFT 540
            +++ RA + F +++ +GI+PN+VT NTLI+GYC+ G + +A+E L M+LE  F+PDIFT
Sbjct: 501 AQMIGRAFQAFEEMRLRGIAPNLVTLNTLINGYCKVGELSRARELLVMVLENGFKPDIFT 560

Query: 541 FNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLRKMQ 600
           F+ +IDGLC+  + E+AF C +EM+EW V PN+  YN LIR+ C IG+  RS +LL KMQ
Sbjct: 561 FSPIIDGLCRLKQIEEAFACLSEMLEWGVAPNSCVYNTLIRALCVIGDTGRSMRLLNKMQ 618

Query: 601 LHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLR 637
             GI+PD  SFN L+Q++ +MNK  KAE LF SML+
Sbjct: 621 ADGIKPDASSFNVLVQTFCKMNKAEKAENLFRSMLK 618

BLAST of CmoCh06G015530 vs. TAIR10
Match: AT3G16890.1 (AT3G16890.1 pentatricopeptide (PPR) domain protein 40)

HSP 1 Score: 662.5 bits (1708), Expect = 2.6e-190
Identity = 319/580 (55.00%), Postives = 422/580 (72.76%), Query Frame = 1

Query: 67  NTSLIRHPTREHSLN-----LKPIDHSYISRILLSKDWFLLLNHEFKAKRLVLAPQFVVS 126
           N S   +P    +LN       P++  YIS+++  KDWFL+LN EF   R+ L  +FV+S
Sbjct: 22  NASTSVNPKLSKTLNSSGKPTNPLNQRYISQVIERKDWFLILNQEFTTHRIGLNTRFVIS 81

Query: 127 ILQNQENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSVDLLQQIKE 186
           +LQNQ+NPL+++RFY+WVSN DP  AK QS++ VLG  L+R+GP   +LLS++LL++I++
Sbjct: 82  VLQNQDNPLHSLRFYLWVSNFDPVYAKDQSLKSVLGNALFRKGP---LLLSMELLKEIRD 141

Query: 187 SGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKSNSLDL 246
           SG +++ EL+C+L+GSWGRLGLAKYC +VF QISFLG+ P+TRLYNAVIDAL+KSNSLDL
Sbjct: 142 SGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDL 201

Query: 247 AYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILID 306
           AYLKFQQM S  C PDRFTYNILIHGVC+ GVVDEA+RL+KQME  G  PNVFTYTILID
Sbjct: 202 AYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILID 261

Query: 307 GFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDFVEKKPGV 366
           GF  A R +EA   L+ M+ R + PN AT+R+ VHG+FRC  P KAFE L+ F+EK   +
Sbjct: 262 GFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNL 321

Query: 367 SQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQKEACDIF 426
            ++  D +LYCLSNNSMA E   FL K+G++GY+PDSSTFN  M+C+L   D  E C IF
Sbjct: 322 QRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIF 381

Query: 427 DNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMVIDCLCKG 486
           D    RGVKPGF+ YL L++AL  A +   G++Y+ ++  DGL+S+ YSYN VIDCLCK 
Sbjct: 382 DGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKA 441

Query: 487 KLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPDIFTF 546
           + ++ AA    ++Q +GISPN+VTFNT +SGY   G + K    LE LL   F+PD+ TF
Sbjct: 442 RRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITF 501

Query: 547 NSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLRKMQL 606
           + +I+ LC+A + +DAF CF EM+EW + PN ITYNILIRS C+ G+  RS +L  KM+ 
Sbjct: 502 SLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKE 561

Query: 607 HGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP 642
           +G+ PD +++NA IQS+ +M KV KAE+L  +MLR    P
Sbjct: 562 NGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKP 598

BLAST of CmoCh06G015530 vs. TAIR10
Match: AT1G12700.1 (AT1G12700.1 ATP binding;nucleic acid binding;helicases)

HSP 1 Score: 220.3 bits (560), Expect = 3.4e-57
Identity = 127/472 (26.91%), Postives = 233/472 (49.36%), Query Frame = 1

Query: 171 LSVDLLQQIKESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVI 230
           L +D  +Q++ +G+      L I++  + R     +   V G++  LG  P T  +N +I
Sbjct: 106 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI 165

Query: 231 DALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYF 290
             L     +  A +   +M  + C PD  TYN +++G+CR G    AL L+++ME     
Sbjct: 166 KGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVK 225

Query: 291 PNVFTYTILIDGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEY 350
            +VFTY+ +ID        + A  + + M+ + +  +  T  SLV G+ +    +     
Sbjct: 226 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL 285

Query: 351 LLDFVEKKPGVSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMA--CV 410
           L D V ++   + +  + +L          EA     +M  +G  P+  T+N  M   C+
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345

Query: 411 LNKLDQKEACDIFDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNN 470
            N+L   EA ++ D   +    P   T+ +LI+      + + G K    I K GLV+N 
Sbjct: 346 QNRLS--EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA 405

Query: 471 YSYNMVIDCLCKGKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEM 530
            +Y++++   C+   +  A E+F+++ S G+ P+++T+  L+ G C NG ++KA E  E 
Sbjct: 406 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 465

Query: 531 LLECRFRPDIFTFNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGN 590
           L + +    I  + ++I+G+C+  K EDA+  F  +    V PN +TY ++I   C  G+
Sbjct: 466 LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 525

Query: 591 VARSTQLLRKMQLHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYS 641
           ++ +  LLRKM+  G  P+  ++N LI+++ R   +  + KL + M    +S
Sbjct: 526 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575

BLAST of CmoCh06G015530 vs. TAIR10
Match: AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 218.0 bits (554), Expect = 1.7e-56
Identity = 119/458 (25.98%), Postives = 230/458 (50.22%), Query Frame = 1

Query: 187 TQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKSN-SLDLAYLK 246
           T  +  +++ S+ RL L    + +       G  P    YNAV+DA I+S  ++  A   
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192

Query: 247 FQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFN 306
           F++M      P+ FTYNILI G C  G +D AL L  +ME  G  PNV TY  LIDG+  
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252

Query: 307 AMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDFVEKKPGVSQLV 366
             + ++ F +L++M  + + PN  +   +++G+ R     +    L +   +   + ++ 
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312

Query: 367 CDNIL--YCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQKEACDIFDN 426
            + ++  YC   N    +A++  ++M + G  P   T+   +  +    +   A +  D 
Sbjct: 313 YNTLIKGYCKEGNF--HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 372

Query: 427 CTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMVIDCLCKGKL 486
              RG+ P   TY  L++   + G      + +  +  +G   +  +YN +I+  C    
Sbjct: 373 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 432

Query: 487 MDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPDIFTFNS 546
           M+ A  +  D++ KG+SP++V+++T++SG+CR+  +D+A      ++E   +PD  T++S
Sbjct: 433 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 492

Query: 547 VIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLRKMQLHG 606
           +I G C+  + ++A   + EM+   + P+  TY  LI ++C  G++ ++ QL  +M   G
Sbjct: 493 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 552

Query: 607 IQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP 642
           + PD  +++ LI    + ++  +A++L   +  +   P
Sbjct: 553 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP 588

BLAST of CmoCh06G015530 vs. TAIR10
Match: AT1G62670.1 (AT1G62670.1 rna processing factor 2)

HSP 1 Score: 216.5 bits (550), Expect = 4.9e-56
Identity = 128/466 (27.47%), Postives = 218/466 (46.78%), Query Frame = 1

Query: 171 LSVDLLQQIKESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVI 230
           L++ +L ++ + G +     L  LL  +         V +  Q+   G  P T  +N +I
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193

Query: 231 DALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYF 290
             L   N    A     +M +  C PD  TY ++++G+C+ G  D A  L+ +ME     
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 253

Query: 291 PNVFTYTILIDGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEY 350
           P V  Y  +IDG       ++A  + + M+ + + PN  T  SL+  +        A   
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313

Query: 351 LLDFVEKKPGVSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFN--VTMACV 410
           L D +E+K          ++          EA     +M K+   P   T++  +   C+
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373

Query: 411 LNKLDQKEACDIFDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNN 470
            ++LD  EA  +F+    +   P   TY  LI+   K  + E G +    + + GLV N 
Sbjct: 374 HDRLD--EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 433

Query: 471 YSYNMVIDCLCKGKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEM 530
            +YN++I  L +    D A EIF+++ S G+ PNI+T+NTL+ G C+NG ++KA    E 
Sbjct: 434 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 493

Query: 531 LLECRFRPDIFTFNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGN 590
           L   +  P I+T+N +I+G+C+A K ED +  F  +    V P+ + YN +I  FC  G+
Sbjct: 494 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 553

Query: 591 VARSTQLLRKMQLHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSM 635
              +  L ++M+  G  P++  +N LI++  R      + +L   M
Sbjct: 554 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597

BLAST of CmoCh06G015530 vs. TAIR10
Match: AT5G65560.1 (AT5G65560.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 215.7 bits (548), Expect = 8.3e-56
Identity = 129/474 (27.22%), Postives = 231/474 (48.73%), Query Frame = 1

Query: 175 LLQQIKESGLKVTQELLCI-------LLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYN 234
           L+ ++K+  +++ ++ +C        ++  + +LG  +   +   +I   GL+P    Y 
Sbjct: 198 LVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYT 257

Query: 235 AVIDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGL 294
           ++I    +   LD A+  F +M    C  +   Y  LIHG+C    +DEA+ L  +M+  
Sbjct: 258 SLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDD 317

Query: 295 GYFPNVFTYTILIDGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKA 354
             FP V TYT+LI     + R  EA  +++ M+E  + PN  T   L+  +   C  +KA
Sbjct: 318 ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKA 377

Query: 355 FEYLLDFVEKKPGVSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMAC 414
            E L   +EK    + +  + ++       M  +AV  +  M  +   P++ T+N  +  
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 437

Query: 415 VLNKLDQKEACDIFDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSN 474
              K +  +A  + +   +R V P   TY +LI+   ++G  +   + +  +   GLV +
Sbjct: 438 YC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD 497

Query: 475 NYSYNMVIDCLCKGKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLE 534
            ++Y  +ID LCK K ++ A ++F  L+ KG++PN+V +  LI GYC+ G +D+A   LE
Sbjct: 498 QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 557

Query: 535 MLLECRFRPDIFTFNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIG 594
            +L     P+  TFN++I GLC   K ++A     +MV+  + P   T  ILI      G
Sbjct: 558 KMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 617

Query: 595 NVARSTQLLRKMQLHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP 642
           +   +    ++M   G +PD  ++   IQ+Y R  ++  AE +   M  +  SP
Sbjct: 618 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP 670

BLAST of CmoCh06G015530 vs. NCBI nr
Match: gi|778679015|ref|XP_011651072.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis sativus])

HSP 1 Score: 1059.3 bits (2738), Expect = 2.7e-306
Identity = 521/647 (80.53%), Postives = 570/647 (88.10%), Query Frame = 1

Query: 1   MKGLHSSGLRATPVLRNRPQEAYSTINEYRRRNPSNTVHRTSKHNPLNNTEAPSRGNPYP 60
           M+G  SS  RATPVLRNRP +AY+ IN++RR+ PSN++ RTSK +P NN EAPSRGNP P
Sbjct: 1   MRGFPSSAFRATPVLRNRPLQAYTPINKHRRQLPSNSIQRTSKQSPFNNLEAPSRGNPSP 60

Query: 61  LTSQLENTSLIRHPTR------EHSLNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLVL 120
           LT+ L+  S I+  T       +HSL+LKPID SYIS+ILLSKDWFLLLNHEFKAKR+VL
Sbjct: 61  LTTPLKAPSSIQLSTPPSLADDKHSLSLKPIDRSYISKILLSKDWFLLLNHEFKAKRVVL 120

Query: 121 APQFVVSILQNQENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSVD 180
           +PQFVVSILQNQ+NPL+AIRFYIWVSN+DP L KKQ I+GVL RNL+REGPDRPVLLSVD
Sbjct: 121 SPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVD 180

Query: 181 LLQQIKESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALI 240
           LLQQIKESGLKVT+ELLCIL GSWGRLGLA YCVEVFGQI  LGLNPTTRLYNAV+DALI
Sbjct: 181 LLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALI 240

Query: 241 KSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVF 300
           KSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVF
Sbjct: 241 KSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVF 300

Query: 301 TYTILIDGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDF 360
           TYTILIDGFFNA RA E F VLQTMKERNVVPN ATMRSLVHGVFRC APDKAFE LL+F
Sbjct: 301 TYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMRSLVHGVFRCIAPDKAFELLLEF 360

Query: 361 VEKKPGVSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQ 420
           VE+K G++QLVCDNILYCLSNNSMASEAVMFL K GK+GYVP SSTFN+T+ACVL KLD 
Sbjct: 361 VERKQGITQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDL 420

Query: 421 KEACDIFDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMV 480
           K  C +FDNC Q GVKPGFSTYL LIEALYKAGK EIGN+YMDR+I DGL+SN YSYNMV
Sbjct: 421 KVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMV 480

Query: 481 IDCLCKGKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRF 540
           IDCLCKGK MDRA+E+FRDL ++GISPNIVT+NTLI G+CRNG MDKAQE LEMLLE RF
Sbjct: 481 IDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRF 540

Query: 541 RPDIFTFNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQ 600
           RPDIFTFNS+IDGLCQAHK+E+AFGCF EMVEWDV PN ITYNILI SFCAIG+V+RST 
Sbjct: 541 RPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTH 600

Query: 601 LLRKMQLHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP 642
           LLR+M+LHGIQPDTFSFNALIQ Y   N+  KAEKLFDSMLR    P
Sbjct: 601 LLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQP 647

BLAST of CmoCh06G015530 vs. NCBI nr
Match: gi|659076906|ref|XP_008438926.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis melo])

HSP 1 Score: 1058.9 bits (2737), Expect = 3.5e-306
Identity = 527/648 (81.33%), Postives = 570/648 (87.96%), Query Frame = 1

Query: 1   MKGLHSSGLRATPVLRNRPQEAYSTINEYRRRNPSNTVHRTSKHNPLNN-TEAPSRGNPY 60
           M+G  S   R TPVLRNRP +AY+ IN +RR+ PS+++ RTSK +  NN  EAPSRGNP 
Sbjct: 1   MRGFLSLAFRETPVLRNRPLQAYTPINNHRRQFPSDSIQRTSKQSSFNNIVEAPSRGNPS 60

Query: 61  PLTSQLENTSLIRHPTR------EHSLNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLV 120
           PLT+ L+ +S I+  TR      EH    KPIDHSYIS+ILLSKDWFLLLNHEFKAKR+V
Sbjct: 61  PLTTPLKASSSIQLSTRPSLADDEH----KPIDHSYISKILLSKDWFLLLNHEFKAKRIV 120

Query: 121 LAPQFVVSILQNQENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSV 180
           L+ QFVVSILQNQ+NPLNAIRFYIWVSN DP L K Q I+GVLGRNLYREGPDRPVLLSV
Sbjct: 121 LSLQFVVSILQNQDNPLNAIRFYIWVSNADPLLVKGQVIQGVLGRNLYREGPDRPVLLSV 180

Query: 181 DLLQQIKESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDAL 240
           DLLQQIKESGLKVT+ELLCIL GSWGRLGLAKYCVEVFGQI  LGLNPTTRLYNAVIDAL
Sbjct: 181 DLLQQIKESGLKVTEELLCILFGSWGRLGLAKYCVEVFGQIGLLGLNPTTRLYNAVIDAL 240

Query: 241 IKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNV 300
           IKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNV
Sbjct: 241 IKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNV 300

Query: 301 FTYTILIDGFFNAMRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLD 360
           FTYTILIDGFFNA RA+EAF VLQTMKERNVVPNAATMRSLVHGVFRC APDKAFE LL+
Sbjct: 301 FTYTILIDGFFNAKRADEAFKVLQTMKERNVVPNAATMRSLVHGVFRCIAPDKAFELLLE 360

Query: 361 FVEKKPGVSQLVCDNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLD 420
           FV++K GVSQLVCDNILYCLSNNSMAS+AVMFLSK GK+GYVP SSTFNVT+AC+L KLD
Sbjct: 361 FVKRKQGVSQLVCDNILYCLSNNSMASKAVMFLSKTGKEGYVPSSSTFNVTLACLLKKLD 420

Query: 421 QKEACDIFDNCTQRGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNM 480
            KE C IFDNC Q GVKPGFSTYL LIEALYKAGK EIGN+YMDR+I DGL+SN YSYNM
Sbjct: 421 LKETCTIFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNM 480

Query: 481 VIDCLCKGKLMDRAAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECR 540
           VIDCLCKGK MDRA EIFRDL ++GISPNIVT+NTLI G+CRNG M+KAQE LE+LLECR
Sbjct: 481 VIDCLCKGKSMDRAYEIFRDLHNRGISPNIVTYNTLIGGFCRNGNMNKAQELLEILLECR 540

Query: 541 FRPDIFTFNSVIDGLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARST 600
           FRPDIFTFNS+IDGLCQAHK+EDAFGCF EMVEWDV PN ITYNILIRSFCAIG+V+RST
Sbjct: 541 FRPDIFTFNSLIDGLCQAHKHEDAFGCFTEMVEWDVPPNVITYNILIRSFCAIGDVSRST 600

Query: 601 QLLRKMQLHGIQPDTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP 642
            LLR+MQLHG+QPDTFSFNALIQ Y   N+V KAEKLF SMLR    P
Sbjct: 601 HLLRQMQLHGLQPDTFSFNALIQGYIGTNRVQKAEKLFCSMLRLGIQP 644

BLAST of CmoCh06G015530 vs. NCBI nr
Match: gi|590661683|ref|XP_007035741.1| (Pentatricopeptide (PPR) domain protein 40, putative [Theobroma cacao])

HSP 1 Score: 790.0 bits (2039), Expect = 3.0e-225
Identity = 382/575 (66.43%), Postives = 468/575 (81.39%), Query Frame = 1

Query: 67  NTSLIRHPTREHSLNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLVLAPQFVVSILQNQ 126
           NT +   P+R +S     I+H YIS+IL   DWFLLLNHE KAKR+VL PQFVVS+LQNQ
Sbjct: 36  NTPVPPPPSRGNSA----INHHYISQILSRNDWFLLLNHELKAKRIVLNPQFVVSLLQNQ 95

Query: 127 ENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSVDLLQQIKESGLKV 186
           ENPL  +RFYIWVSNIDP  AK QS++GVL   LYR+GP   VLLSV+L++ I+ SGL V
Sbjct: 96  ENPLYPLRFYIWVSNIDPLFAKNQSVKGVLATALYRKGP---VLLSVELVKDIRNSGLVV 155

Query: 187 TQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKSNSLDLAYLKF 246
           T++LLCIL+GSWGRLGLAKYC E+FGQISFLG++P+TRLYNAVIDALIKSNSLDLAYLKF
Sbjct: 156 TEDLLCILIGSWGRLGLAKYCAEIFGQISFLGISPSTRLYNAVIDALIKSNSLDLAYLKF 215

Query: 247 QQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNA 306
           QQMS+ NC PDRFTYNILIHGVCR GVVDEALRL+KQMEGLGY PNV+TYTILIDGF NA
Sbjct: 216 QQMSADNCKPDRFTYNILIHGVCRTGVVDEALRLVKQMEGLGYSPNVYTYTILIDGFCNA 275

Query: 307 MRAEEAFGVLQTMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDFVEKKPGVSQLVC 366
            R +EAF +++ MK+RNV+PN AT+RSL+HGVFRC AP +AFE L+ F+EK+P + +L C
Sbjct: 276 RRVDEAFRLVEMMKKRNVIPNEATVRSLIHGVFRCVAPHEAFELLIMFLEKEPMMQKLAC 335

Query: 367 DNILYCLSNNSMASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQKEACDIFDNCTQ 426
           D +LYCLSNNSMA EA +F+ K+  +GY+PD+STFN+TMAC++  LD  E C I D+  +
Sbjct: 336 DTLLYCLSNNSMAREAALFMKKLAGRGYLPDNSTFNLTMACLIKGLDLDETCLILDSFVE 395

Query: 427 RGVKPGFSTYLALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMVIDCLCKGKLMDR 486
            GVK GF+TYLALI+ALY  GK   G++Y+D++ KDGL++N +SYNMVID  CK  +MDR
Sbjct: 396 LGVKLGFNTYLALIQALYNIGKFVEGDQYLDQMAKDGLLANVFSYNMVIDSFCKASMMDR 455

Query: 487 AAEIFRDLQSKGISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPDIFTFNSVID 546
           A + FR++  +GI+P +VTFNT+ISG+C+ G + KA+EFL MLLE  F PDIFTF+S+ID
Sbjct: 456 ARKTFREMYLRGIAPTLVTFNTIISGHCKIGEVHKAKEFLVMLLESGFDPDIFTFSSLID 515

Query: 547 GLCQAHKYEDAFGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLRKMQLHGIQP 606
           GLC+AH  +DAF CF+EM +WDVTPN +TYNILIRS CAIG+VAR+ +LLRKMQ  GI  
Sbjct: 516 GLCRAHMIDDAFDCFSEMFQWDVTPNDVTYNILIRSLCAIGDVARAMKLLRKMQATGINA 575

Query: 607 DTFSFNALIQSYFRMNKVHKAEKLFDSMLRDSYSP 642
           D FSFNALIQS+ RM K+ KAEKLF+SMLR    P
Sbjct: 576 DIFSFNALIQSFCRMKKIEKAEKLFNSMLRLGLDP 603

BLAST of CmoCh06G015530 vs. NCBI nr
Match: gi|1009131836|ref|XP_015883057.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 782.7 bits (2020), Expect = 4.8e-223
Identity = 379/624 (60.74%), Postives = 480/624 (76.92%), Query Frame = 1

Query: 21  EAYSTINEYRRRNPSNTVHRTSKHNPLNNTEAPSRGNPYPLTSQLENTSL---IRHPTRE 80
           + Y T+   +R  PS    R +   P + T  P       + SQL+N++    I    ++
Sbjct: 6   DLYHTVRIVKRETPSKVKLRKAPDQPSSTTTGPLHSTGNSIASQLQNSNSAVSISDAKQK 65

Query: 81  HSLNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLVLAPQFVVSILQNQENPLNAIRFYI 140
            S+N +P DH YI++IL  KDW LLLNHE K KR++L  QF VS+LQNQENP + ++F+ 
Sbjct: 66  KSINKQPTDHRYIAKILSRKDWSLLLNHELKTKRVILNAQFAVSVLQNQENPSSCLKFFT 125

Query: 141 WVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSVDLLQQIKESGLKVTQELLCILLGS 200
           WVSN +PSLAK QS+RG L   L+R+GP   ++ SV+LL+ +++SG ++T++LLCIL+GS
Sbjct: 126 WVSNTNPSLAKNQSVRGALANTLFRKGP---LVFSVELLRDVRKSGCRLTEDLLCILIGS 185

Query: 201 WGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKSNSLDLAYLKFQQMSSHNCVPD 260
           WGRLGLAKYC EVFGQISFLGL+P+TRLYNAVIDAL+KSNSLDLAYLKFQQMS  NC PD
Sbjct: 186 WGRLGLAKYCGEVFGQISFLGLSPSTRLYNAVIDALVKSNSLDLAYLKFQQMSGDNCSPD 245

Query: 261 RFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAMRAEEAFGVLQ 320
           RFTYNILIHGVCR GVVDEALRL+KQME LG  PNVFTYTILIDGF N+ R +EAF +L+
Sbjct: 246 RFTYNILIHGVCRNGVVDEALRLVKQMERLGCLPNVFTYTILIDGFCNSKRVDEAFKILE 305

Query: 321 TMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDFVEKKPGVSQLVCDNILYCLSNNS 380
           TMKERNV PN AT+RSLVHGVFRC AP KAFE L  FVEK P  S+L CD ILYCLSNNS
Sbjct: 306 TMKERNVSPNEATIRSLVHGVFRCMAPYKAFELLFGFVEKNPHFSKLACDTILYCLSNNS 365

Query: 381 MASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQKEACDIFDNCTQRGVKPGFSTYL 440
           M  E   FL K+G +GY+PDSSTFN+TM  ++ + D  E C+IF++  +RGVKPGF+TYL
Sbjct: 366 MVRETAAFLRKIGLEGYLPDSSTFNITMISLIKEFDLNETCEIFESFIKRGVKPGFNTYL 425

Query: 441 ALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMVIDCLCKGKLMDRAAEIFRDLQSK 500
           AL+EA+YKAG+   G++++D++ KDGLVSN YSYNM+IDC CK K+++RA+E F ++Q  
Sbjct: 426 ALVEAVYKAGRVAEGDRFLDKMNKDGLVSNVYSYNMLIDCFCKAKMVERASETFTNMQLI 485

Query: 501 GISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPDIFTFNSVIDGLCQAHKYEDA 560
           GI PN+VTFNTLI+GYC+ G + KA+E L  LLE  F+PDIFTF+S+IDGLC+ ++ E A
Sbjct: 486 GIDPNLVTFNTLITGYCKAGEVGKARELLVKLLEHGFKPDIFTFSSIIDGLCRVNQIEAA 545

Query: 561 FGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLRKMQLHGIQPDTFSFNALIQS 620
           F CF EMVEW VTP+++TYNILI S CAIG+  RST+LL+KMQ  G+ PD+ SF+ALI S
Sbjct: 546 FECFTEMVEWGVTPSSVTYNILIHSLCAIGDTGRSTRLLKKMQADGLSPDSVSFSALILS 605

Query: 621 YFRMNKVHKAEKLFDSMLRDSYSP 642
           + RM KV +A+KLF SML+   +P
Sbjct: 606 FCRMKKVEQAKKLFLSMLKMDLAP 626

BLAST of CmoCh06G015530 vs. NCBI nr
Match: gi|1009132000|ref|XP_015883149.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 782.3 bits (2019), Expect = 6.3e-223
Identity = 379/624 (60.74%), Postives = 480/624 (76.92%), Query Frame = 1

Query: 21  EAYSTINEYRRRNPSNTVHRTSKHNPLNNTEAPSRGNPYPLTSQLENTSL---IRHPTRE 80
           + Y T+   +R  PS    R +   P + T  P       + SQL+N++    I    ++
Sbjct: 6   DLYHTVRIAKRETPSKVKLRKAPDQPSSTTTGPLHSTGNSIASQLQNSNSAVSISDAKQK 65

Query: 81  HSLNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLVLAPQFVVSILQNQENPLNAIRFYI 140
            S+N +P DH YI++IL  KDW LLLNHE K KR++L  QF VS+LQNQENP + ++F+ 
Sbjct: 66  KSINKQPTDHRYIAKILSRKDWSLLLNHELKTKRVILNAQFAVSVLQNQENPSSCLKFFT 125

Query: 141 WVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSVDLLQQIKESGLKVTQELLCILLGS 200
           WVSN +PSLAK QS+RG L   L+R+GP   ++ SV+LL+ +++SG ++T++LLCIL+GS
Sbjct: 126 WVSNTNPSLAKNQSVRGALANTLFRKGP---LVFSVELLRDVRKSGCRLTEDLLCILIGS 185

Query: 201 WGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALIKSNSLDLAYLKFQQMSSHNCVPD 260
           WGRLGLAKYC EVFGQISFLGL+P+TRLYNAVIDAL+KSNSLDLAYLKFQQMS  NC PD
Sbjct: 186 WGRLGLAKYCGEVFGQISFLGLSPSTRLYNAVIDALVKSNSLDLAYLKFQQMSGDNCSPD 245

Query: 261 RFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAMRAEEAFGVLQ 320
           RFTYNILIHGVCR GVVDEALRL+KQME LG  PNVFTYTILIDGF N+ R +EAF +L+
Sbjct: 246 RFTYNILIHGVCRNGVVDEALRLVKQMERLGCLPNVFTYTILIDGFCNSKRVDEAFKILE 305

Query: 321 TMKERNVVPNAATMRSLVHGVFRCCAPDKAFEYLLDFVEKKPGVSQLVCDNILYCLSNNS 380
           TMKERNV PN AT+RSLVHGVFRC AP KAFE L  FVEK P  S+L CD ILYCLSNNS
Sbjct: 306 TMKERNVSPNEATIRSLVHGVFRCMAPYKAFELLFGFVEKNPHFSKLACDTILYCLSNNS 365

Query: 381 MASEAVMFLSKMGKKGYVPDSSTFNVTMACVLNKLDQKEACDIFDNCTQRGVKPGFSTYL 440
           M  E   FL K+G +GY+PDSSTFN+TM  ++ + D  E C+IF++  +RGVKPGF+TYL
Sbjct: 366 MVRETAAFLRKIGLEGYLPDSSTFNITMISLIKEFDLNETCEIFESFIKRGVKPGFNTYL 425

Query: 441 ALIEALYKAGKTEIGNKYMDRIIKDGLVSNNYSYNMVIDCLCKGKLMDRAAEIFRDLQSK 500
           AL+EA+YKAG+   G++++D++ KDGLVSN YSYNM+IDC CK K+++RA+E F ++Q  
Sbjct: 426 ALVEAVYKAGRVAEGDRFLDKMNKDGLVSNVYSYNMLIDCFCKAKMVERASETFTNMQLI 485

Query: 501 GISPNIVTFNTLISGYCRNGGMDKAQEFLEMLLECRFRPDIFTFNSVIDGLCQAHKYEDA 560
           GI PN+VTFNTLI+GYC+ G + KA+E L  LLE  F+PDIFTF+S+IDGLC+ ++ E A
Sbjct: 486 GIDPNLVTFNTLITGYCKAGEVGKARELLVKLLEHGFKPDIFTFSSIIDGLCRVNQIEAA 545

Query: 561 FGCFNEMVEWDVTPNAITYNILIRSFCAIGNVARSTQLLRKMQLHGIQPDTFSFNALIQS 620
           F CF EMVEW VTP+++TYNILI S CAIG+  RST+LL+KMQ  G+ PD+ SF+ALI S
Sbjct: 546 FECFTEMVEWGVTPSSVTYNILIHSLCAIGDTGRSTRLLKKMQADGLSPDSVSFSALILS 605

Query: 621 YFRMNKVHKAEKLFDSMLRDSYSP 642
           + RM KV +A+KLF SML+   +P
Sbjct: 606 FCRMKKVEQAKKLFLSMLKMDLAP 626

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP239_ARATH4.6e-18955.00Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS... [more]
RF1_ORYSI2.7e-5627.59Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1[more]
PPR38_ARATH6.0e-5626.91Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS... [more]
PP407_ARATH3.0e-5525.98Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... [more]
PPR91_ARATH8.7e-5527.47Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0L5W1_CUCSA1.9e-30680.53Uncharacterized protein OS=Cucumis sativus GN=Csa_3G165700 PE=4 SV=1[more]
A0A061EQQ8_THECC2.1e-22566.43Pentatricopeptide (PPR) domain protein 40, putative OS=Theobroma cacao GN=TCM_02... [more]
F6H743_VITVI1.9e-21859.78Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01320 PE=4 SV=... [more]
B9RZM2_RICCO7.3e-21862.46Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
W9RIC1_9ROSA8.1e-21758.33Uncharacterized protein OS=Morus notabilis GN=L484_007742 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G16890.12.6e-19055.00 pentatricopeptide (PPR) domain protein 40[more]
AT1G12700.13.4e-5726.91 ATP binding;nucleic acid binding;helicases[more]
AT5G39710.11.7e-5625.98 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G62670.14.9e-5627.47 rna processing factor 2[more]
AT5G65560.18.3e-5627.22 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|778679015|ref|XP_011651072.1|2.7e-30680.53PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitoc... [more]
gi|659076906|ref|XP_008438926.1|3.5e-30681.33PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitoc... [more]
gi|590661683|ref|XP_007035741.1|3.0e-22566.43Pentatricopeptide (PPR) domain protein 40, putative [Theobroma cacao][more]
gi|1009131836|ref|XP_015883057.1|4.8e-22360.74PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitoc... [more]
gi|1009132000|ref|XP_015883149.1|6.3e-22360.74PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitoc... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006950 response to stress
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G015530.1CmoCh06G015530.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 434..464
score: 0.64coord: 226..254
score:
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 603..634
score: 9.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 467..515
score: 2.6E-14coord: 259..304
score: 2.5E-14coord: 536..584
score: 6.3
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 259..293
score: 4.0E-8coord: 574..608
score: 1.4E-6coord: 504..538
score: 6.8E-6coord: 539..573
score: 2.5E-9coord: 469..503
score: 2.4E-9coord: 225..257
score: 1.2E-5coord: 294..328
score: 2.1E-7coord: 609..641
score: 4.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 292..326
score: 11.257coord: 327..357
score: 5.546coord: 502..536
score: 12.485coord: 257..291
score: 12.869coord: 607..641
score: 11.882coord: 537..571
score: 12.233coord: 572..606
score: 11.783coord: 222..256
score: 9.482coord: 187..221
score: 5.831coord: 397..431
score: 8.035coord: 432..466
score: 7.596coord: 362..396
score: 7.695coord: 467..501
score: 12
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 344..415
score: 5.4E-6coord: 470..635
score: 5.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 93..136
score: 2.0E-177coord: 192..636
score: 2.0E
NoneNo IPR availablePANTHERPTHR24015:SF760SUBFAMILY NOT NAMEDcoord: 192..636
score: 2.0E-177coord: 93..136
score: 2.0E

The following gene(s) are paralogous to this gene:

None