Bhi01G000768 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi01G000768
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Pentatricopeptide repeat-containing protein
Location	chr1 : 19992515 .. 19999395 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGATTAAGAGAGAGAGAGAGAGAGAGAGAGAAAAAAAAAAAAAGAAAACAAATCCTTACCAAACTAGCCAAAAATATATTGTTTTCAAATATACTCTCGGACAAAAATCAGTGACCATTTTATAAACGAAGCGAGACTGGTGGGCATTAGGCTTGGTCTCCTGAAAGGCCATGAGAGGGCTTCCTTCGGCTTTCAGGGCAACGCCTGTTCTAAGAAATCGACCTCTACAAGCTTACACTCCCACCAACAGATATCGGAGACAAATCCCTTCCGATACAATCCAACGAACTTCAAAACAAAGACCCTTTAACAACACTGAAGCGCCTTCAAGAGGTAATCCTTCCCCACTAACTACTCCGTTAAAGGCTCCCAGTTTGATTAACCTGCCCACTCGTTCATCTCTTGCTGATGATAAACGTAGATTGAGTCTTAAACCAATTGATCATTCATATCTTTCTAGGATTCTATTGAGCAAGGACTGGTTTCTATTGTTAAACCACGAGTATAAGGCGAAAAGGGTCGTTTTGGTTCCTCAATTTGTTGTTAGTATTTTGCAAAATCAGGACAACCCATTAAATGCTGTTAGGTTTTATATTTGGGTTTCGAATGTCGACCCGTTACTTGCAAAGAAACAATCGATTCGAGAGGTTCTTGGCCGCAACCTTTATCGAGAAGGTCCTGATCGTCCGGTGCTATTATCTGTTGATCTGCTTCAGCAAATTAAAGAGTCTGGTCTTAAAGTGACAGAGGAATTACTCTGTATTTTATTTGGCAGTTGGGGTAGATTGGGTTTGTCAAAATACTGTGTGGAAATATTTGGGCAAATTGGGTTTTTGGGTCTTAATCCCACCACCAGACTGTACAATGCTGTAATTGATGCATTGATCAAGTCCAATTCGCTAGACTTGGCTTATTTGAAATTTCAACAAATGTCATCCCATAACTGTGTCCCTGATAGGTTCACTTATAACATTCTCATCCATGGTGTTTGTAGGATCGGGGTGGTGGATGAGGCGCTTCGTTTGATCAAACAAATGGAGGGCTTGGGATATTTTCCGAATGTTTTCACATATACAATCTTGATTGATGGATTTTGCAATGCTAAAAGGGCTGATGAAGCCTTCAGAGTTTTACAGACAATGAAGGAGAAGAATGTGGTTCCAAATGCAGCTTCTATGAGATCCTTGGTTCATGGAGTTTTTCGTTGTATTGCCCCAGATAAGGCTTTTGAACTTTTGCTGGAATTTGTTGAGAAGAAGCAGGGCGTATCTCAATTGGTTTGTGACAATATTCTTTACTGCCTTTCAAATAATTCTATGGCCAGTGAGGCTGTCATGTTTTTGAGTAAAACTGGCAAGAAAGGTTATGTACCGGACAGTTCAACCTTCAATGTCACCTTGGCATGCGTACTAAAGAAACTAGACCTGAAGGAAACATGCAATATATTTGATAATTGTGTGCAAAGAGGTGTCAAGCCAGCGTTCAGTACATATCTTACACTTATTGAAGCTCTGTATAAGGCAGGAATAATTGAGATTGGAAACCAATATATGGATCGGATGGTAAACGATGGTCTTATTTCCAACATATATTCATATAACATGGTCATTGATTGCCTTTGCAAAGGCAAATTAATGGATAGAGCATCTGAAATCTTCAGGGATCTACACTATAAAGGCATTGCTCCAAATATTGTTACTTATAATACACTTATCAGTGGGTATTGCAGAAATGGAAATATGGACAAAGCTCAGGAACTTCTTGAAATGCTATTAGAATGTCATTTTAGACCAGATATCTTCACATTTAATTCATTAATTGATGGCCTCTGTCAGGCACACAAGCATGAGGATGCTTTTGGTTGTTTCACTGAAATGGTTGAGTGGGATGTCATGCCAAATGCTATCACATATAATATATTGATACGTTCCTTCTGTGCGATTGGAGATGTTTCTAGATCTACTAATCTCTTGAGACAAATGCAACTTCATGGTATACAACCTGATACTTTCTCCTTCAATGCTCTTATCCAGAGCTACTTTCGAATGAACAAGGTTCAGAAAGCTGAGAAGCTTTTTGATTCATTGTTAAGGTTGGGTATACAGCCTGACAATTATACATATGGTGCACTTATTAAGGCATTGTGCAAATCAGGTAGGCATGATGAAGCAAGGGAGATGTTTCTCTCAATGAAGGCGAATGGTTGCACTCCTGACTCTTATACTTGCAGTCTTATTAGCGACACTCTTGCCCATATTTAGATCTTTATTAGGATGCTGAGGATATTGTGAAGATTTAAGAAAATATGACGACAAGAACATTTTATAAACAACTTGGAAATTGGGAATTGGCCGTTTATTGGAACTGATCTCATGATGTTTCCCATTTTTGAGCACTGTCAAAATGAGTGCCCCTTGTTTGAAGAGAGGAGGGCAAGTGTTTCACATTGCATTTGATGTTTAGGAGTCTGGTAAGTTCTGACTCCAAATGTTTTTTGGTCAAATAACAGTGTTGCTGAACAGCCTGAACTAATCAAGGTGCATAAGCAAGCTTGAATAGAATACCCACAGTTATTAAAAAGAACATCACGCTGTTCTCCTAAATCTTGATGCTTGGCAGTTGGGACTAGGAGCAGTTGCCTGCTAAAATTTAAGCTGCTATCGTTATCTTCGTTTGTAAGCACACGTAGGTGTGTAATAAGGCATAAACACTTCCATTTGGGCTCCTCTTATTCTCTAACAGTGTAGTTGAAACTCCAAAAGTCGTTACCTGAGGGGACAAACCTTACTACTCCCCCTGGATCATCCTGCTGGCATTATATGAGGGTTTAGAATTCAGCAGCTTATTGATGCTGTAGTCTTGCATTTTCATATACTGTGGGTAAAACAGAAAGCTCCACATCATGGTACAACTGTCATTCATGTGACCTTAATACAACGTATCAAATTTTCAATAAGAGGAAAATACTTTATTGGTTGCCTGTTTCCAATGGGAAAAGGGGATCAGGTGTTATCTTTCAATCTTTGCAAAGAAGAGTCCAAGTTTGAAGAACTTTTACTCTGATTTCTCCGTAACTATTAACCTAGGCTTGATTTGAGGACTTGACGCTCCTTTGCAGATTACGAATCATGTTTTTGACTTATTATGTAAGACACTGGGGACATCCTTACCTCTTTTATGACCAATAGAAATGAAACAAAATTCCAAGAAATCTTGATGTCGTTATTCTCTTGTGCTATTCCATTTTCCCTTTTTCTGGTTATCATGTCAGAATGATGAATGCTATAGAAAGGACTTGACATGGGTGTTTCTATCGGATTTTGAAGGGGAATTTGGTCTGTTGGTTTCACATCTAGCTCTTATGATTGAGATATCATATCAGTGTTAAAGCTGGCTTATATCTGCAATTACCTCTCTCTTTGCAGATAGGTAGCTTGCAGAGGATTATAATTTTCTTCCTTTAATTGGCGTTTGATTGTAGTTGACACTTCTGACAGGTTAGGTGGATAAAGTTGTATGTGCAATGGACGCCTCAGGTGTTGACTTTGTTGAAACATTCTCCAACTTTTGCTGCGTTTGGATCTTGTGAAGATGCTGTCCTTGTGATAGAGGTAACATGCCGATTGCATAACACATTACATGCATTCTGTTTAAAGACGGCATACTGTACTTCCTTTTATTCATGTAGGCGAACTAACTTCTATAATTTGGAGTACCCCAGAAGGAAAAAAAAAGGAAAAAGAAAAAAAGAACTGAACCTGGGATAGTTATTGTATTCAACAAAAGATTTCGACATTAAAAGAAATTTTGTTTGTAGTTGTACTGGTTGACAGTAGGTGGTGGTTTAATATTAAAGTCCTATTAAGATTTCCTTTAGCCATTATGTTTTCTCTAGACAATGGGGGGGAGGGGGGGGGGGAGGCCACTAAAATTTTCTTTATAACCTACCACATATAAGGAAAAATAATCGCAATGAATGTTGACAACTAATATTTACCCAAAATTAAAAGAAATGCTAACGCTCTATTCAAGTTGGTTTAAAGATGTTTCCATAGCTAGCATGTCAATTAATTTGTCAATAATCCATCTCATTGCCCTAGAATTTTCCTGGACATCATAGCGCCATCGTTCATTGTTGCCTTTGCTAGCCACGTCGTTCATTTCATTGAAGAGTATCACAGCCTCGCTCTTCGTCGAAGAGTTTTAATGGCCGTTTGCTGCCTTGTTGAAGTGCGGTAGATAATAGGCAATAATTCTAGAAAATTTTTAGTGGCCTCCTCCACTCACTCAAATGTTAGAGTGGACAATTTATATGCATCTTAATGGAGAACCGTTCTTTAGTAATTTTTGTTGGGAAAATCTTTTCGGTTCTACCGTAGGAACCAAAAGAAAAATTACATAGAAAATAAAAGAAGCAATCAAGAATTAATGTGAAAAAAATTTCAAACTAGAGAAAAATCACACACCAATAAAATTTTTACTATGTAAAAAATTATTACAACCACACAAAAATCTCTCTTCGACCCAATTACAAGCACTTTCAAAGCGTTTAACTCACACAATTGAGCTAGTATACAAAGTTTAGAGTGTTTTAAAGTAGGATGATTTGAAATTAAAGACATAGGGTCCTTTTATAATACTTGGAGCTCATAACTTTTTTTAACCTTTCAGATGTGGGACAACTATTTTTCTAATATTTTGTCAAAATCTAACTATTTTTGATATTCAAATTTAATGATTTAATATGATGAGCCAAAAGCGAATATAGTTCAACTGACATAAGAATGTGTTAATTACTAAGAGGATATGTGGTTCGAATTCTATATTCTATTGTACTAAAAAAAGAAAAAAATGATGAACATATTATCATCCAAAATGAAACTAATTAGACAAAACAAAAAACCAAGTGTCAATTTCTGAAAATAAGATCTTAATTCTCTGCCCTGTCTTCATATGGAACTGGAATTGCCGGCAGGGTTGAAATGGAGGAAACATTTATAGGGAAAGTCGCGTGGATTATTGGGAAGGAAGAGAAATTTGGAATGTTTACCAATTTTTAAATGAATTTTCAGCTTATTTTCCATGTTATTAAACAGAATAGACATGGCAGACAATCCATGTCAACAAATACTAGTTAATCATCATTTCGTCAGGTTAAAGTTTTAAGTAGGAATAATTTAGAATCATTTTGTAATCTTTACTAATCAAATAGATATCAGTTCAAATTTAAGGGATCAAAAGTGTATATGAACGTTAAGAGATGTTATGATGGTGGTTTGACCCACAAAAACTCACATTTATTGTGGTATTGGATCACAATGAATAAATATGAAGTTAACCCCATCGGTTTAAATTTTAATGACGGGTTTGATAAGTAGGAACCTGTGGAAATCAAATCGCCTGCATCTCCCTGTTCCCTTGGTTTCTCTATTGACAATAATAGCAGAATCCATCTCAAAGTGCTTTGCCTTTTTTTTTTTTTTTTTTGTCTCATTAATTCTGTAAGGTACGGAATGCCCAAATTCAGAAAGGGTTAGAGGTTCATTTCATGGTTTGTTGCCCTTAGTAGGAATTATACCTTTGATATCAATTAAGGGTCCTCGGCTCTAGTGCTTCACTTGCAGCGGTGTGTTCTTTATAAAAATGGCGTGGGAAGATTTGGATCATTTATCATATAGGGATGCTCCTTTTCTGTTAAGGTGTTAGATGTTGTGACACGATAGACCAAATTTCTCTTTCCTCCCTTGACAAGTGGTCTCTTTGCACTTTTGTGGAGTATTTGGCTTGACAGAAACTAGAGGCCTTTTTCAGATGTCGAGGATTCTACGCTTGGATTAATGACTCAATATTGGTTCATACTTCACAACTTTTTTGTAATTGTGATGCACTTTTTCTACCAATAGCTGGCCTCCTTTTTGTAACTTTTGTATTTCATTTAATTATGCCATCCCAATGTTGGCCCAACCCAACTTTTATTAGACTGCAACTGCAAACCCGTCGTGCATCGTAAATTTTGTGAGGCTTGGAGCGTTGCCTACGTAGTAACTTGTCAACTTGTTGTAGTTGGTGACGAAGCGAAGTTTCAGTGTATTGATGGCTAACTTTTGATATTCCTTTAGTTTTAAGAGAATATTTGTCTATTTGCTAAATATGGACCACTGCATTGATCCATTTAGTTCTGCCATTCTGCAAGTGGGTTTTATATTTATTGTATTTGCTCAGCAAATTGAATACTTTCACCATTCTTTAGATTGGAGAGTCCATGAAAAACTCTATGAGTTACTCTTTTAAAATGCATTTTGCAGGGTATAGTTATTCGTTGAGATGAAGATGAATTAGATGGCTCGAGCGAGCAGTTGGTTTGTTTCGCTCGAATCCTAATGTCTCTATGAGACAGCAAAAAGCCTTGACATTATGAGTCGATCAGATTACTTGTCAGCCAAGTTTACTTCGATGTTGTCAGCTTTATTCGGTTATTAAGAAACAAAAAGAAGACTCCAATACTTTATTCGGCTATGATTCTTCTTACAGTCGAGATCTTAAAGCTTATGACTTCGGAAACTTTACATGACCACCGTAGATACAAATCTAATCTAGTAAGAAGATTTGAACAAAAATTCACACGCTATTTGATTTCTCCTACTTATATGAATGACTATTTTGTATTGCTTTTACATATAACATTGTTCTGATCTTTCCTTGGAGATTGATTTACTACTCAACTAGTGATTGAAGCAATCTTATTGTTCTCTTAATGTATGATACTGTAGAATTTTGTTGTTTGTGTGGACTGTTTGTACAATTTTTTCCCTTTTAAATGTTTGTAATTTTAGAATCTCTCAGAAATTTATTTATGTGGAGATGATTAACTTGTGAGGG

mRNA sequence

CTCGATTAAGAGAGAGAGAGAGAGAGAGAGAGAAAAAAAAAAAAAGAAAACAAATCCTTACCAAACTAGCCAAAAATATATTGTTTTCAAATATACTCTCGGACAAAAATCAGTGACCATTTTATAAACGAAGCGAGACTGGTGGGCATTAGGCTTGGTCTCCTGAAAGGCCATGAGAGGGCTTCCTTCGGCTTTCAGGGCAACGCCTGTTCTAAGAAATCGACCTCTACAAGCTTACACTCCCACCAACAGATATCGGAGACAAATCCCTTCCGATACAATCCAACGAACTTCAAAACAAAGACCCTTTAACAACACTGAAGCGCCTTCAAGAGGTAATCCTTCCCCACTAACTACTCCGTTAAAGGCTCCCAGTTTGATTAACCTGCCCACTCGTTCATCTCTTGCTGATGATAAACGTAGATTGAGTCTTAAACCAATTGATCATTCATATCTTTCTAGGATTCTATTGAGCAAGGACTGGTTTCTATTGTTAAACCACGAGTATAAGGCGAAAAGGGTCGTTTTGGTTCCTCAATTTGTTGTTAGTATTTTGCAAAATCAGGACAACCCATTAAATGCTGTTAGGTTTTATATTTGGGTTTCGAATGTCGACCCGTTACTTGCAAAGAAACAATCGATTCGAGAGGTTCTTGGCCGCAACCTTTATCGAGAAGGTCCTGATCGTCCGGTGCTATTATCTGTTGATCTGCTTCAGCAAATTAAAGAGTCTGGTCTTAAAGTGACAGAGGAATTACTCTGTATTTTATTTGGCAGTTGGGGTAGATTGGGTTTGTCAAAATACTGTGTGGAAATATTTGGGCAAATTGGGTTTTTGGGTCTTAATCCCACCACCAGACTGTACAATGCTGTAATTGATGCATTGATCAAGTCCAATTCGCTAGACTTGGCTTATTTGAAATTTCAACAAATGTCATCCCATAACTGTGTCCCTGATAGGTTCACTTATAACATTCTCATCCATGGTGTTTGTAGGATCGGGGTGGTGGATGAGGCGCTTCGTTTGATCAAACAAATGGAGGGCTTGGGATATTTTCCGAATGTTTTCACATATACAATCTTGATTGATGGATTTTGCAATGCTAAAAGGGCTGATGAAGCCTTCAGAGTTTTACAGACAATGAAGGAGAAGAATGTGGTTCCAAATGCAGCTTCTATGAGATCCTTGGTTCATGGAGTTTTTCGTTGTATTGCCCCAGATAAGGCTTTTGAACTTTTGCTGGAATTTGTTGAGAAGAAGCAGGGCGTATCTCAATTGGTTTGTGACAATATTCTTTACTGCCTTTCAAATAATTCTATGGCCAGTGAGGCTGTCATGTTTTTGAGTAAAACTGGCAAGAAAGGTTATGTACCGGACAGTTCAACCTTCAATGTCACCTTGGCATGCGTACTAAAGAAACTAGACCTGAAGGAAACATGCAATATATTTGATAATTGTGTGCAAAGAGGTGTCAAGCCAGCGTTCAGTACATATCTTACACTTATTGAAGCTCTGTATAAGGCAGGAATAATTGAGATTGGAAACCAATATATGGATCGGATGGTAAACGATGGTCTTATTTCCAACATATATTCATATAACATGGTCATTGATTGCCTTTGCAAAGGCAAATTAATGGATAGAGCATCTGAAATCTTCAGGGATCTACACTATAAAGGCATTGCTCCAAATATTGTTACTTATAATACACTTATCAGTGGGTATTGCAGAAATGGAAATATGGACAAAGCTCAGGAACTTCTTGAAATGCTATTAGAATGTCATTTTAGACCAGATATCTTCACATTTAATTCATTAATTGATGGCCTCTGTCAGGCACACAAGCATGAGGATGCTTTTGGTTGTTTCACTGAAATGGTTGAGTGGGATGTCATGCCAAATGCTATCACATATAATATATTGATACGTTCCTTCTGTGCGATTGGAGATGTTTCTAGATCTACTAATCTCTTGAGACAAATGCAACTTCATGGTATACAACCTGATACTTTCTCCTTCAATGCTCTTATCCAGAGCTACTTTCGAATGAACAAGGTTCAGAAAGCTGAGAAGCTTTTTGATTCATTGTTAAGGTTGGGTATACAGCCTGACAATTATACATATGGTGCACTTATTAAGGCATTGTGCAAATCAGGTAGGCATGATGAAGCAAGGGAGATGTTTCTCTCAATGAAGGCGAATGGTTGCACTCCTGACTCTTATACTTGCAGTCTTATTAGCGACACTCTTGCCCATATTTAGATCTTTATTAGGATGCTGAGGATATTGTGAAGATTTAAGAAAATATGACGACAAGAACATTTTATAAACAACTTGGAAATTGGGAATTGGCCGTTTATTGGAACTGATCTCATGATGTTTCCCATTTTTGAGCACTGTCAAAATGAGTGCCCCTTGTTTGAAGAGAGGAGGGCAAGTGTTTCACATTGCATTTGATGTTTAGGAGTCTGGTAAGTTCTGACTCCAAATGTTTTTTGGTCAAATAACAGTGTTGCTGAACAGCCTGAACTAATCAAGGTGCATAAGCAAGCTTGAATAGAATACCCACAGTTATTAAAAAGAACATCACGCTGTTCTCCTAAATCTTGATGCTTGGCAGTTGGGACTAGGAGCAGTTGCCTGCTAAAATTTAAGCTGCTATCGTTATCTTCGTTTGTAAGCACACGTAGGTGTGTAATAAGGCATAAACACTTCCATTTGGGCTCCTCTTATTCTCTAACAGTGTAGTTGAAACTCCAAAAGTCGTTACCTGAGGGGACAAACCTTACTACTCCCCCTGGATCATCCTGCTGGCATTATATGAGGGTTTAGAATTCAGCAGCTTATTGATGCTGTAGTCTTGCATTTTCATATACTGTGGGTAAAACAGAAAGCTCCACATCATGGTACAACTGTCATTCATGTGACCTTAATACAACGTATCAAATTTTCAATAAGAGGAAAATACTTTATTGGTTGCCTGTTTCCAATGGGAAAAGGGGATCAGGTGTTATCTTTCAATCTTTGCAAAGAAGAGTCCAAGTTTGAAGAACTTTTACTCTGATTTCTCCGTAACTATTAACCTAGGCTTGATTTGAGGACTTGACGCTCCTTTGCAGATTACGAATCATGTTTTTGACTTATTATGTAAGACACTGGGGACATCCTTACCTCTTTTATGACCAATAGAAATGAAACAAAATTCCAAGAAATCTTGATGTCGTTATTCTCTTGTGCTATTCCATTTTCCCTTTTTCTGGTTATCATGTCAGAATGATGAATGCTATAGAAAGGACTTGACATGGGTGTTTCTATCGGATTTTGAAGGGGAATTTGGTCTGTTGGTTTCACATCTAGCTCTTATGATTGAGATATCATATCAGTGTTAAAGCTGGCTTATATCTGCAATTACCTCTCTCTTTGCAGATAGGTAGCTTGCAGAGGATTATAATTTTCTTCCTTTAATTGGCGTTTGATTGTAGTTGACACTTCTGACAGGTTAGGTGGATAAAGTTGTATGTGCAATGGACGCCTCAGGTGTTGACTTTGTTGAAACATTCTCCAACTTTTGCTGCGTTTGGATCTTGTGAAGATGCTGTCCTTGTGATAGAGGGTATAGTTATTCGTTGAGATGAAGATGAATTAGATGGCTCGAGCGAGCAGTTGGTTTGTTTCGCTCGAATCCTAATGTCTCTATGAGACAGCAAAAAGCCTTGACATTATGAGTCGATCAGATTACTTGTCAGCCAAGTTTACTTCGATGTTGTCAGCTTTATTCGGTTATTAAGAAACAAAAAGAAGACTCCAATACTTTATTCGGCTATGATTCTTCTTACAGTCGAGATCTTAAAGCTTATGACTTCGGAAACTTTACATGACCACCGTAGATACAAATCTAATCTAGTAAGAAGATTTGAACAAAAATTCACACGCTATTTGATTTCTCCTACTTATATGAATGACTATTTTGTATTGCTTTTACATATAACATTGTTCTGATCTTTCCTTGGAGATTGATTTACTACTCAACTAGTGATTGAAGCAATCTTATTGTTCTCTTAATGTATGATACTGTAGAATTTTGTTGTTTGTGTGGACTGTTTGTACAATTTTTTCCCTTTTAAATGTTTGTAATTTTAGAATCTCTCAGAAATTTATTTATGTGGAGATGATTAACTTGTGAGGG

Coding sequence (CDS)

ATGAGAGGGCTTCCTTCGGCTTTCAGGGCAACGCCTGTTCTAAGAAATCGACCTCTACAAGCTTACACTCCCACCAACAGATATCGGAGACAAATCCCTTCCGATACAATCCAACGAACTTCAAAACAAAGACCCTTTAACAACACTGAAGCGCCTTCAAGAGGTAATCCTTCCCCACTAACTACTCCGTTAAAGGCTCCCAGTTTGATTAACCTGCCCACTCGTTCATCTCTTGCTGATGATAAACGTAGATTGAGTCTTAAACCAATTGATCATTCATATCTTTCTAGGATTCTATTGAGCAAGGACTGGTTTCTATTGTTAAACCACGAGTATAAGGCGAAAAGGGTCGTTTTGGTTCCTCAATTTGTTGTTAGTATTTTGCAAAATCAGGACAACCCATTAAATGCTGTTAGGTTTTATATTTGGGTTTCGAATGTCGACCCGTTACTTGCAAAGAAACAATCGATTCGAGAGGTTCTTGGCCGCAACCTTTATCGAGAAGGTCCTGATCGTCCGGTGCTATTATCTGTTGATCTGCTTCAGCAAATTAAAGAGTCTGGTCTTAAAGTGACAGAGGAATTACTCTGTATTTTATTTGGCAGTTGGGGTAGATTGGGTTTGTCAAAATACTGTGTGGAAATATTTGGGCAAATTGGGTTTTTGGGTCTTAATCCCACCACCAGACTGTACAATGCTGTAATTGATGCATTGATCAAGTCCAATTCGCTAGACTTGGCTTATTTGAAATTTCAACAAATGTCATCCCATAACTGTGTCCCTGATAGGTTCACTTATAACATTCTCATCCATGGTGTTTGTAGGATCGGGGTGGTGGATGAGGCGCTTCGTTTGATCAAACAAATGGAGGGCTTGGGATATTTTCCGAATGTTTTCACATATACAATCTTGATTGATGGATTTTGCAATGCTAAAAGGGCTGATGAAGCCTTCAGAGTTTTACAGACAATGAAGGAGAAGAATGTGGTTCCAAATGCAGCTTCTATGAGATCCTTGGTTCATGGAGTTTTTCGTTGTATTGCCCCAGATAAGGCTTTTGAACTTTTGCTGGAATTTGTTGAGAAGAAGCAGGGCGTATCTCAATTGGTTTGTGACAATATTCTTTACTGCCTTTCAAATAATTCTATGGCCAGTGAGGCTGTCATGTTTTTGAGTAAAACTGGCAAGAAAGGTTATGTACCGGACAGTTCAACCTTCAATGTCACCTTGGCATGCGTACTAAAGAAACTAGACCTGAAGGAAACATGCAATATATTTGATAATTGTGTGCAAAGAGGTGTCAAGCCAGCGTTCAGTACATATCTTACACTTATTGAAGCTCTGTATAAGGCAGGAATAATTGAGATTGGAAACCAATATATGGATCGGATGGTAAACGATGGTCTTATTTCCAACATATATTCATATAACATGGTCATTGATTGCCTTTGCAAAGGCAAATTAATGGATAGAGCATCTGAAATCTTCAGGGATCTACACTATAAAGGCATTGCTCCAAATATTGTTACTTATAATACACTTATCAGTGGGTATTGCAGAAATGGAAATATGGACAAAGCTCAGGAACTTCTTGAAATGCTATTAGAATGTCATTTTAGACCAGATATCTTCACATTTAATTCATTAATTGATGGCCTCTGTCAGGCACACAAGCATGAGGATGCTTTTGGTTGTTTCACTGAAATGGTTGAGTGGGATGTCATGCCAAATGCTATCACATATAATATATTGATACGTTCCTTCTGTGCGATTGGAGATGTTTCTAGATCTACTAATCTCTTGAGACAAATGCAACTTCATGGTATACAACCTGATACTTTCTCCTTCAATGCTCTTATCCAGAGCTACTTTCGAATGAACAAGGTTCAGAAAGCTGAGAAGCTTTTTGATTCATTGTTAAGGTTGGGTATACAGCCTGACAATTATACATATGGTGCACTTATTAAGGCATTGTGCAAATCAGGTAGGCATGATGAAGCAAGGGAGATGTTTCTCTCAATGAAGGCGAATGGTTGCACTCCTGACTCTTATACTTGCAGTCTTATTAGCGACACTCTTGCCCATATTTAG

Protein sequence

MRGLPSAFRATPVLRNRPLQAYTPTNRYRRQIPSDTIQRTSKQRPFNNTEAPSRGNPSPLTTPLKAPSLINLPTRSSLADDKRRLSLKPIDHSYLSRILLSKDWFLLLNHEYKAKRVVLVPQFVVSILQNQDNPLNAVRFYIWVSNVDPLLAKKQSIREVLGRNLYREGPDRPVLLSVDLLQQIKESGLKVTEELLCILFGSWGRLGLSKYCVEIFGQIGFLGLNPTTRLYNAVIDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRIGVVDEALRLIKQMEGLGYFPNVFTYTILIDGFCNAKRADEAFRVLQTMKEKNVVPNAASMRSLVHGVFRCIAPDKAFELLLEFVEKKQGVSQLVCDNILYCLSNNSMASEAVMFLSKTGKKGYVPDSSTFNVTLACVLKKLDLKETCNIFDNCVQRGVKPAFSTYLTLIEALYKAGIIEIGNQYMDRMVNDGLISNIYSYNMVIDCLCKGKLMDRASEIFRDLHYKGIAPNIVTYNTLISGYCRNGNMDKAQELLEMLLECHFRPDIFTFNSLIDGLCQAHKHEDAFGCFTEMVEWDVMPNAITYNILIRSFCAIGDVSRSTNLLRQMQLHGIQPDTFSFNALIQSYFRMNKVQKAEKLFDSLLRLGIQPDNYTYGALIKALCKSGRHDEAREMFLSMKANGCTPDSYTCSLISDTLAHI

Homology

[Close]

BLAST of Bhi01G000768 vs. TAIR10
Match: AT3G16890.1 (pentatricopeptide (PPR) domain protein 40)

HSP 1 Score: 216.5 bits (550), Expect = 5.3e-56
Identity = 96/162 (59.26%), Postives = 136/162 (83.95%), Query Frame = 0


Query: 89  PIDHSYLSRILLSKDWFLLLNHEYKAKRVVLVPQFVVSILQNQDNPLNAVRFYIWVSNVD 148
           P++  Y+S+++  KDWFL+LN E+   R+ L  +FV+S+LQNQDNPL+++RFY+WVSN D
Sbjct: 44  PLNQRYISQVIERKDWFLILNQEFTTHRIGLNTRFVISVLQNQDNPLHSLRFYLWVSNFD 103

Query: 149 PLLAKKQSIREVLGRNLYREGPDRPVLLSVDLLQQIKESGLKVTEELLCILFGSWGRLGL 208
           P+ AK QS++ VLG  L+R+G   P+LLS++LL++I++SG ++++EL+C+L GSWGRLGL
Sbjct: 104 PVYAKDQSLKSVLGNALFRKG---PLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGL 163

Query: 209 SKYCVEIFGQIGFLGLNPTTRLYNAVIDALIKSNSLDLAYLK 251
           +KYC ++F QI FLG+ P+TRLYNAVIDAL+KSNSLDLAYLK
Sbjct: 164 AKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLK 202

[Close]

BLAST of Bhi01G000768 vs. TAIR10
Match: AT3G48810.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 51.6 bits (122), Expect = 2.3e-06
Identity = 29/91 (31.87%), Postives = 51/91 (56.04%), Query Frame = 0


Query: 159 EVLGRNLYREGPDRPVLLSVDLLQQIKESGLKVTEELLCILFGSWGRLGLSKYCVEIFGQ 218
           EV+ R L  +G    V     LLQQ+K  G   +E+L   +   + ++GL++  VE+F +
Sbjct: 80  EVMIRKLAMDGQVDSVQY---LLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 139

Query: 219 IGFLGLNPTTRLYNAVIDALIKSNSLDLAYL 250
           I   G +P+ ++YN V+D L+  N + + Y+
Sbjct: 140 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYM 167

[Close]

BLAST of Bhi01G000768 vs. Swiss-Prot
Match: sp|Q9LSQ2|PP239_ARATH (Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PPR40 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 9.6e-55
Identity = 96/162 (59.26%), Postives = 136/162 (83.95%), Query Frame = 0


Query: 89  PIDHSYLSRILLSKDWFLLLNHEYKAKRVVLVPQFVVSILQNQDNPLNAVRFYIWVSNVD 148
           P++  Y+S+++  KDWFL+LN E+   R+ L  +FV+S+LQNQDNPL+++RFY+WVSN D
Sbjct: 44  PLNQRYISQVIERKDWFLILNQEFTTHRIGLNTRFVISVLQNQDNPLHSLRFYLWVSNFD 103

Query: 149 PLLAKKQSIREVLGRNLYREGPDRPVLLSVDLLQQIKESGLKVTEELLCILFGSWGRLGL 208
           P+ AK QS++ VLG  L+R+G   P+LLS++LL++I++SG ++++EL+C+L GSWGRLGL
Sbjct: 104 PVYAKDQSLKSVLGNALFRKG---PLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGL 163

Query: 209 SKYCVEIFGQIGFLGLNPTTRLYNAVIDALIKSNSLDLAYLK 251
           +KYC ++F QI FLG+ P+TRLYNAVIDAL+KSNSLDLAYLK
Sbjct: 164 AKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLK 202

[Close]

BLAST of Bhi01G000768 vs. Swiss-Prot
Match: sp|Q9M302|PP270_ARATH (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX=3702 GN=At3g48810 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 4.1e-05
Identity = 29/91 (31.87%), Postives = 51/91 (56.04%), Query Frame = 0


Query: 159 EVLGRNLYREGPDRPVLLSVDLLQQIKESGLKVTEELLCILFGSWGRLGLSKYCVEIFGQ 218
           EV+ R L  +G    V     LLQQ+K  G   +E+L   +   + ++GL++  VE+F +
Sbjct: 80  EVMIRKLAMDGQVDSVQY---LLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 139

Query: 219 IGFLGLNPTTRLYNAVIDALIKSNSLDLAYL 250
           I   G +P+ ++YN V+D L+  N + + Y+
Sbjct: 140 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYM 167

[Close]

BLAST of Bhi01G000768 vs. TrEMBL
Match: tr|A0A1S3AXI6|A0A1S3AXI6_CUCME (putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103483881 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 2.3e-114
Identity = 220/260 (84.62%), Postives = 231/260 (88.85%), Query Frame = 0


Query: 1   MRG-LPSAFRATPVLRNRPLQAYTPTNRYRRQIPSDTIQRTSKQRPFNN-TEAPSRGNPS 60
           MRG L  AFR TPVLRNRPLQAYTP N +RRQ PSD+IQRTSKQ  FNN  EAPSRGNPS
Sbjct: 1   MRGFLSLAFRETPVLRNRPLQAYTPINNHRRQFPSDSIQRTSKQSSFNNIVEAPSRGNPS 60

Query: 61  PLTTPLKAPSLINLPTRSSLADDKRRLSLKPIDHSYLSRILLSKDWFLLLNHEYKAKRVV 120
           PLTTPLKA S I L TR SLADD+     KPIDHSY+S+ILLSKDWFLLLNHE+KAKR+V
Sbjct: 61  PLTTPLKASSSIQLSTRPSLADDEH----KPIDHSYISKILLSKDWFLLLNHEFKAKRIV 120

Query: 121 LVPQFVVSILQNQDNPLNAVRFYIWVSNVDPLLAKKQSIREVLGRNLYREGPDRPVLLSV 180
           L  QFVVSILQNQDNPLNA+RFYIWVSN DPLL K Q I+ VLGRNLYREGPDRPVLLSV
Sbjct: 121 LSLQFVVSILQNQDNPLNAIRFYIWVSNADPLLVKGQVIQGVLGRNLYREGPDRPVLLSV 180

Query: 181 DLLQQIKESGLKVTEELLCILFGSWGRLGLSKYCVEIFGQIGFLGLNPTTRLYNAVIDAL 240
           DLLQQIKESGLKVTEELLCILFGSWGRLGL+KYCVE+FGQIG LGLNPTTRLYNAVIDAL
Sbjct: 181 DLLQQIKESGLKVTEELLCILFGSWGRLGLAKYCVEVFGQIGLLGLNPTTRLYNAVIDAL 240

Query: 241 IKSNSLDLAYLKFQQMSSHN 259
           IKSNSLDLAYLKFQQMSSHN
Sbjct: 241 IKSNSLDLAYLKFQQMSSHN 256

[Close]

BLAST of Bhi01G000768 vs. TrEMBL
Match: tr|A0A0A0L5W1|A0A0A0L5W1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G165700 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 2.8e-99
Identity = 198/259 (76.45%), Postives = 208/259 (80.31%), Query Frame = 0


Query: 1   MRGLP-SAFRATPVLRNRPLQAYTPTNRYRRQIPSDTIQRTSKQRPFNNTEAPSRGNPSP 60
           MRG P SAFRATPVLRNRPLQAYT                                  SP
Sbjct: 1   MRGFPSSAFRATPVLRNRPLQAYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP 60

Query: 61  LTTPLKAPSLINLPTRSSLADDKRRLSLKPIDHSYLSRILLSKDWFLLLNHEYKAKRVVL 120
           LTTPLKAPS I L T  SLADDK  LSLKPID SY+S+ILLSKDWFLLLNHE+KAKRVVL
Sbjct: 61  LTTPLKAPSSIQLSTPPSLADDKHSLSLKPIDRSYISKILLSKDWFLLLNHEFKAKRVVL 120

Query: 121 VPQFVVSILQNQDNPLNAVRFYIWVSNVDPLLAKKQSIREVLGRNLYREGPDRPVLLSVD 180
            PQFVVSILQNQDNPL+A+RFYIWVSNVDPLL KKQ I+ VL RNL+REGPDRPVLLSVD
Sbjct: 121 SPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVD 180

Query: 181 LLQQIKESGLKVTEELLCILFGSWGRLGLSKYCVEIFGQIGFLGLNPTTRLYNAVIDALI 240
           LLQQIKESGLKVTEELLCILFGSWGRLGL+ YCVE+FGQIG LGLNPTTRLYNAV+DALI
Sbjct: 181 LLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALI 240

Query: 241 KSNSLDLAYLKFQQMSSHN 259
           KSNSLDLAYLKFQQMSSHN
Sbjct: 241 KSNSLDLAYLKFQQMSSHN 259

[Close]

BLAST of Bhi01G000768 vs. TrEMBL
Match: tr|A0A2N9IWV6|A0A2N9IWV6_FAGSY (Non-specific serine/threonine protein kinase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56612 PE=3 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.1e-76
Identity = 149/248 (60.08%), Postives = 194/248 (78.23%), Query Frame = 0


Query: 7   AFRATPVLRNRPLQAYTPTNRYRRQIPSDTIQRTSKQRPFNNTEAPSRGNPSPLTTPLKA 66
           A RA+  +RN P +A+   N  +R  PS       K +   N EA SRGNPSPL +  + 
Sbjct: 8   ASRASAAIRNLPEEAWNKKN-LQRDTPSKV-----KSKKVTNFEALSRGNPSPLNSQFRN 67

Query: 67  PSLINLPTRSSLADDKRRLSLKPIDHSYLSRILLSKDWFLLLNHEYKAKRVVLVPQFVVS 126
           P+L+++ +++ ++ DKR+L++KPIDH Y+S++L  KDWFLLLNHE KA+R++L PQFVVS
Sbjct: 68  PNLVSI-SKTPISADKRKLTIKPIDHQYISQVLSRKDWFLLLNHEVKARRIILNPQFVVS 127

Query: 127 ILQNQDNPLNAVRFYIWVSNVDPLLAKKQSIREVLGRNLYREGPDRPVLLSVDLLQQIKE 186
           +LQNQ+NPL+ ++FY+WVSN+DPL AK QS+R VL   LYR+G   PV+LSV+LLQ I+ 
Sbjct: 128 VLQNQENPLHPLKFYVWVSNIDPLFAKNQSVRGVLANALYRKG---PVVLSVELLQDIRN 187

Query: 187 SGLKVTEELLCILFGSWGRLGLSKYCVEIFGQIGFLGLNPTTRLYNAVIDALIKSNSLDL 246
           SG +V+E+LLCIL GSWGRLGL+ YC E+FGQI FLGL+PTTRLYNAVIDALIK+NSLDL
Sbjct: 188 SGFRVSEDLLCILIGSWGRLGLANYCAEVFGQISFLGLSPTTRLYNAVIDALIKANSLDL 245

Query: 247 AYLKFQQM 255
           AYLKFQQM
Sbjct: 248 AYLKFQQM 245

[Close]

BLAST of Bhi01G000768 vs. TrEMBL
Match: tr|A0A2P4JMM7|A0A2P4JMM7_QUESU (Putative pentatricopeptide repeat-containing protein, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_43185 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 6.2e-75
Identity = 147/247 (59.51%), Postives = 191/247 (77.33%), Query Frame = 0


Query: 7   AFRATPVLRNRPLQAYTPTNRYRRQIPSDTIQRTSKQRPFNNTEAPSRGNPSPLTTPLKA 66
           A RA+P +RN P +A+   ++ +R  PS       K +   N EAPSRGNPSPL +  + 
Sbjct: 8   ASRASPAIRNLPEEAWN-KHKLQRDSPSKV-----KSKELTNFEAPSRGNPSPLNSQFRN 67

Query: 67  PSLINLPTRSSLADDKRRLSLKPIDHSYLSRILLSKDWFLLLNHEYKAKRVVLVPQFVVS 126
           P+L+++ +++ ++  KR+LS+KPIDH Y+S++L  KDWFLLLNHE K  R+VL PQFVVS
Sbjct: 68  PNLVSI-SKTPISAHKRKLSIKPIDHQYISQVLSRKDWFLLLNHEVKVGRIVLNPQFVVS 127

Query: 127 ILQNQDNPLNAVRFYIWVSNVDPLLAKKQSIREVLGRNLYREGPDRPVLLSVDLLQQIKE 186
           +LQNQ+NPL+ ++FYIWVSN+DP  AK  ++R VL + LYR G   PV+LSV+LLQ I+ 
Sbjct: 128 LLQNQENPLHPLKFYIWVSNIDPSFAKNHAVRGVLAKTLYRNG---PVVLSVELLQDIRN 187

Query: 187 SGLKVTEELLCILFGSWGRLGLSKYCVEIFGQIGFLGLNPTTRLYNAVIDALIKSNSLDL 246
           SG +V+E+LL IL GSWGRLGL+KYC E+FGQI FLGL+PTTRLYNAVIDAL+KSNSLDL
Sbjct: 188 SGFRVSEDLLVILIGSWGRLGLAKYCAEVFGQISFLGLSPTTRLYNAVIDALVKSNSLDL 244

Query: 247 AYLKFQQ 254
           AYLKFQQ
Sbjct: 248 AYLKFQQ 244

[Close]

BLAST of Bhi01G000768 vs. TrEMBL
Match: tr|A0A2I4GFQ3|A0A2I4GFQ3_9ROSI (putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS=Juglans regia OX=51240 GN=LOC109007503 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 9.6e-68
Identity = 142/252 (56.35%), Postives = 186/252 (73.81%), Query Frame = 0


Query: 1   MRGLPS-AFRATPVLRNRPLQAYTPTNRYRRQIPSDTIQRT-SKQRPFNNTEAPSRGNPS 60
           +RG  S A RA+P LRN P +A     +  R  PS    +  + Q   NN EA S GNPS
Sbjct: 3   LRGSSSLASRASPALRNLPEEACN-KKKLPRDAPSKAESKEFTDQGRSNNFEALSTGNPS 62

Query: 61  PLTTPLKAPSLINLPTRSSLADDKRRLSLKPIDHSYLSRILLSKDWFLLLNHEYKAKRVV 120
           PL +  + P+ +++ +++ +   KR+ +++ IDH Y+S+IL  KDWF+LLNHE KA+R++
Sbjct: 63  PLNSQFRNPNSVSI-SKNPIPAKKRQDTVRKIDHQYISQILSRKDWFVLLNHEVKARRII 122

Query: 121 LVPQFVVSILQNQDNPLNAVRFYIWVSNVDPLLAKKQSIREVLGRNLYREGPDRPVLLSV 180
           L  QFV S+LQNQ+NPL+ ++FYIWVSN+DPL AK QSIR VL   L R+G   PV+LSV
Sbjct: 123 LTAQFVASVLQNQENPLHPLKFYIWVSNIDPLFAKNQSIRGVLSNTLSRKG---PVVLSV 182

Query: 181 DLLQQIKESGLKVTEELLCILFGSWGRLGLSKYCVEIFGQIGFLGLNPTTRLYNAVIDAL 240
           +LLQ I+ SG +VTE+LLC+L GSWGRLGL+KYC E+F QI FLGL+PTTRLYNAVIDAL
Sbjct: 183 ELLQDIRNSGCRVTEDLLCVLIGSWGRLGLAKYCAEVFAQISFLGLSPTTRLYNAVIDAL 242

Query: 241 IKSNSLDLAYLK 251
           +K+NSLDLAYLK
Sbjct: 243 VKANSLDLAYLK 249

[Close]

BLAST of Bhi01G000768 vs. NCBI nr
Match: XP_008438927.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis melo] >XP_008438928.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis melo] >XP_016898969.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis melo] >XP_016898970.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis melo])

HSP 1 Score: 422.2 bits (1084), Expect = 3.5e-114
Identity = 220/260 (84.62%), Postives = 231/260 (88.85%), Query Frame = 0


Query: 1   MRG-LPSAFRATPVLRNRPLQAYTPTNRYRRQIPSDTIQRTSKQRPFNN-TEAPSRGNPS 60
           MRG L  AFR TPVLRNRPLQAYTP N +RRQ PSD+IQRTSKQ  FNN  EAPSRGNPS
Sbjct: 1   MRGFLSLAFRETPVLRNRPLQAYTPINNHRRQFPSDSIQRTSKQSSFNNIVEAPSRGNPS 60

Query: 61  PLTTPLKAPSLINLPTRSSLADDKRRLSLKPIDHSYLSRILLSKDWFLLLNHEYKAKRVV 120
           PLTTPLKA S I L TR SLADD+     KPIDHSY+S+ILLSKDWFLLLNHE+KAKR+V
Sbjct: 61  PLTTPLKASSSIQLSTRPSLADDEH----KPIDHSYISKILLSKDWFLLLNHEFKAKRIV 120

Query: 121 LVPQFVVSILQNQDNPLNAVRFYIWVSNVDPLLAKKQSIREVLGRNLYREGPDRPVLLSV 180
           L  QFVVSILQNQDNPLNA+RFYIWVSN DPLL K Q I+ VLGRNLYREGPDRPVLLSV
Sbjct: 121 LSLQFVVSILQNQDNPLNAIRFYIWVSNADPLLVKGQVIQGVLGRNLYREGPDRPVLLSV 180

Query: 181 DLLQQIKESGLKVTEELLCILFGSWGRLGLSKYCVEIFGQIGFLGLNPTTRLYNAVIDAL 240
           DLLQQIKESGLKVTEELLCILFGSWGRLGL+KYCVE+FGQIG LGLNPTTRLYNAVIDAL
Sbjct: 181 DLLQQIKESGLKVTEELLCILFGSWGRLGLAKYCVEVFGQIGLLGLNPTTRLYNAVIDAL 240

Query: 241 IKSNSLDLAYLKFQQMSSHN 259
           IKSNSLDLAYLKFQQMSSHN
Sbjct: 241 IKSNSLDLAYLKFQQMSSHN 256

[Close]

BLAST of Bhi01G000768 vs. NCBI nr
Match: XP_022137852.1 (putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Momordica charantia] >XP_022137853.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Momordica charantia] >XP_022137854.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Momordica charantia] >XP_022137856.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Momordica charantia] >XP_022137857.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Momordica charantia] >XP_022137858.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Momordica charantia] >XP_022137859.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Momordica charantia] >XP_022137860.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Momordica charantia] >XP_022137861.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Momordica charantia] >XP_022137862.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Momordica charantia])

HSP 1 Score: 389.0 bits (998), Expect = 3.3e-104
Identity = 203/260 (78.08%), Postives = 225/260 (86.54%), Query Frame = 0


Query: 1   MRGLP-SAFRATPVLRNRPLQAYTPTNRYRRQIPSDTIQRTSKQRPFNNTEAPSRGNPSP 60
           MRGLP SAFRATPVLRNR       T++ RRQ PS+TIQRTSKQ       +PSRGNP+P
Sbjct: 1   MRGLPSSAFRATPVLRNR------LTSKNRRQFPSNTIQRTSKQ-------SPSRGNPAP 60

Query: 61  LTTPLKAPSLINLPTRSSLADDKRRLSLKPIDHSYLSRILLSKDWFLLLNHEYKAKRVVL 120
           L T LK P+L+ LP  S LA DK   SL+PIDHSY+SR+L SKDW LLLNHE+KA R+VL
Sbjct: 61  LITHLKNPNLVRLPNPSPLA-DKLSSSLEPIDHSYISRVLSSKDWLLLLNHEFKASRIVL 120

Query: 121 VPQFVVSILQNQDNPLNAVRFYIWVSNVDPLLAKKQSIREVLGRNLYREGPDRPVLLSVD 180
            PQFVVSILQNQ+NPLNA+RFYIWVSNVDPLLAKKQ+IR VLGRNLYR+GPDRP+LLSVD
Sbjct: 121 APQFVVSILQNQENPLNAIRFYIWVSNVDPLLAKKQAIRGVLGRNLYRKGPDRPMLLSVD 180

Query: 181 LLQQIKESGLKVTEELLCILFGSWGRLGLSKYCVEIFGQIGFLGLNPTTRLYNAVIDALI 240
           LLQ+IKESGLKVTEELLCIL GSWGRLGL+KYCVE+FGQIGF+GLNP+TRLYNAVIDALI
Sbjct: 181 LLQEIKESGLKVTEELLCILIGSWGRLGLAKYCVEVFGQIGFMGLNPSTRLYNAVIDALI 240

Query: 241 KSNSLDLAYLKFQQMSSHNC 260
           KSNSLDLAYLKFQQM SHNC
Sbjct: 241 KSNSLDLAYLKFQQMPSHNC 246

[Close]

BLAST of Bhi01G000768 vs. NCBI nr
Match: XP_022975218.1 (putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucurbita maxima])

HSP 1 Score: 380.6 bits (976), Expect = 1.2e-101
Identity = 195/248 (78.63%), Postives = 214/248 (86.29%), Query Frame = 0


Query: 1   MRGL-PSAFRATPVLRNRPLQAYTPTNRYRRQIPSDTIQRTSKQRPFNNTEAPSRGNPSP 60
           M+GL  S  RATPVLRNRP +AY+  N YRRQ PS+T+ RTSK  P NNTE PSRGNP P
Sbjct: 1   MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNTVHRTSKHSPLNNTEGPSRGNPYP 60

Query: 61  LTTPLKAPSLINLPTRSSLADDKRRLSLKPIDHSYLSRILLSKDWFLLLNHEYKAKRVVL 120
           L + L+  SLI  PTR      +  L+LKPIDHSY+SRILLSKDWFLLLNHE+KAKR+VL
Sbjct: 61  LISQLENTSLIRHPTR------EHSLNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLVL 120

Query: 121 VPQFVVSILQNQDNPLNAVRFYIWVSNVDPLLAKKQSIREVLGRNLYREGPDRPVLLSVD 180
            PQFVVSILQNQ+NPLNA+RFYIWVSN+DP LAKKQSIR VLG+NLYREGPDRPVLLSVD
Sbjct: 121 APQFVVSILQNQENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGQNLYREGPDRPVLLSVD 180

Query: 181 LLQQIKESGLKVTEELLCILFGSWGRLGLSKYCVEIFGQIGFLGLNPTTRLYNAVIDALI 240
           LLQQIKESGLKVT+ELLCIL GSWGRLGL+KYCVE+FGQI FLGLNPTTRLYNAVIDALI
Sbjct: 181 LLQQIKESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALI 240

Query: 241 KSNSLDLA 248
           KSNSLDLA
Sbjct: 241 KSNSLDLA 242

[Close]

BLAST of Bhi01G000768 vs. NCBI nr
Match: XP_011651072.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis sativus] >XP_011651073.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis sativus] >XP_011651074.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis sativus] >XP_011651075.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis sativus] >XP_011651076.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis sativus] >XP_004134500.2 PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis sativus] >KGN57153.1 hypothetical protein Csa_3G165700 [Cucumis sativus])

HSP 1 Score: 372.1 bits (954), Expect = 4.2e-99
Identity = 198/259 (76.45%), Postives = 208/259 (80.31%), Query Frame = 0


Query: 1   MRGLP-SAFRATPVLRNRPLQAYTPTNRYRRQIPSDTIQRTSKQRPFNNTEAPSRGNPSP 60
           MRG P SAFRATPVLRNRPLQAYT                                  SP
Sbjct: 1   MRGFPSSAFRATPVLRNRPLQAYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP 60

Query: 61  LTTPLKAPSLINLPTRSSLADDKRRLSLKPIDHSYLSRILLSKDWFLLLNHEYKAKRVVL 120
           LTTPLKAPS I L T  SLADDK  LSLKPID SY+S+ILLSKDWFLLLNHE+KAKRVVL
Sbjct: 61  LTTPLKAPSSIQLSTPPSLADDKHSLSLKPIDRSYISKILLSKDWFLLLNHEFKAKRVVL 120

Query: 121 VPQFVVSILQNQDNPLNAVRFYIWVSNVDPLLAKKQSIREVLGRNLYREGPDRPVLLSVD 180
            PQFVVSILQNQDNPL+A+RFYIWVSNVDPLL KKQ I+ VL RNL+REGPDRPVLLSVD
Sbjct: 121 SPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVD 180

Query: 181 LLQQIKESGLKVTEELLCILFGSWGRLGLSKYCVEIFGQIGFLGLNPTTRLYNAVIDALI 240
           LLQQIKESGLKVTEELLCILFGSWGRLGL+ YCVE+FGQIG LGLNPTTRLYNAV+DALI
Sbjct: 181 LLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALI 240

Query: 241 KSNSLDLAYLKFQQMSSHN 259
           KSNSLDLAYLKFQQMSSHN
Sbjct: 241 KSNSLDLAYLKFQQMSSHN 259

[Close]

BLAST of Bhi01G000768 vs. NCBI nr
Match: XP_022934625.1 (putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucurbita moschata])

HSP 1 Score: 332.0 bits (850), Expect = 4.8e-87
Identity = 177/248 (71.37%), Postives = 194/248 (78.23%), Query Frame = 0


Query: 1   MRGL-PSAFRATPVLRNRPLQAYTPTNRYRRQIPSDTIQRTSKQRPFNNTEAPSRGNPSP 60
           M+GL  S  RATPVLRNRP +AY+  N YRR+                            
Sbjct: 1   MKGLHSSGLRATPVLRNRPQEAYSTINEYRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  LTTPLKAPSLINLPTRSSLADDKRRLSLKPIDHSYLSRILLSKDWFLLLNHEYKAKRVVL 120
           LT+ L+  SLI  PTR      +  L+LKPIDHSY+SRILLSKDWFLLLNHE+KAKR+VL
Sbjct: 61  LTSQLENTSLIRHPTR------EHSLNLKPIDHSYISRILLSKDWFLLLNHEFKAKRLVL 120

Query: 121 VPQFVVSILQNQDNPLNAVRFYIWVSNVDPLLAKKQSIREVLGRNLYREGPDRPVLLSVD 180
            PQFVVSILQNQ+NPLNA+RFYIWVSN+DP LAKKQSIR VLGRNLYREGPDRPVLLSVD
Sbjct: 121 APQFVVSILQNQENPLNAIRFYIWVSNIDPSLAKKQSIRGVLGRNLYREGPDRPVLLSVD 180

Query: 181 LLQQIKESGLKVTEELLCILFGSWGRLGLSKYCVEIFGQIGFLGLNPTTRLYNAVIDALI 240
           LLQQIKESGLKVT+ELLCIL GSWGRLGL+KYCVE+FGQI FLGLNPTTRLYNAVIDALI
Sbjct: 181 LLQQIKESGLKVTQELLCILLGSWGRLGLAKYCVEVFGQISFLGLNPTTRLYNAVIDALI 240

Query: 241 KSNSLDLA 248
           KSNSLDLA
Sbjct: 241 KSNSLDLA 242

The following BLAST results are available for this feature:

BLAST of Bhi01G000768 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G16890.1	5.3e-56	59.26	pentatricopeptide (PPR) domain protein 40	[more]
AT3G48810.1	2.3e-06	31.87	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of Bhi01G000768 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LSQ2\|PP239_ARATH	9.6e-55	59.26	Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS...	[more]
sp\|Q9M302\|PP270_ARATH	4.1e-05	31.87	Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX...	[more]

BLAST of Bhi01G000768 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AXI6\|A0A1S3AXI6_CUCME	2.3e-114	84.62	putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS...	[more]
tr\|A0A0A0L5W1\|A0A0A0L5W1_CUCSA	2.8e-99	76.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G165700 PE=4 SV=1	[more]
tr\|A0A2N9IWV6\|A0A2N9IWV6_FAGSY	1.1e-76	60.08	Non-specific serine/threonine protein kinase OS=Fagus sylvatica OX=28930 GN=FSB_...	[more]
tr\|A0A2P4JMM7\|A0A2P4JMM7_QUESU	6.2e-75	59.51	Putative pentatricopeptide repeat-containing protein, mitochondrial OS=Quercus s...	[more]
tr\|A0A2I4GFQ3\|A0A2I4GFQ3_9ROSI	9.6e-68	56.35	putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS...	[more]

BLAST of Bhi01G000768 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438927.1	3.5e-114	84.62	PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitoc...	[more]
XP_022137852.1	3.3e-104	78.08	putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [M...	[more]
XP_022975218.1	1.2e-101	78.63	putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [C...	[more]
XP_011651072.1	4.2e-99	76.45	PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitoc...	[more]
XP_022934625.1	4.8e-87	71.37	putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [C...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042775	mitochondrial ATP synthesis coupled electron transport
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0009651	response to salt stress
biological_process	GO:0006950	response to stress
biological_process	GO:0050896	response to stimulus
biological_process	GO:0008150	biological_process
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M000768	Bhi01M000768	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 231..259 e-value: 0.18 score: 12.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 230..262 e-value: 1.3E-5 score: 23.0 coord: 264..298 e-value: 1.7E-7 score: 28.9 coord: 299..333 e-value: 1.1E-9 score: 35.9 coord: 509..543 e-value: 4.5E-9 score: 33.9 coord: 614..647 e-value: 3.7E-7 score: 27.9 coord: 474..507 e-value: 1.5E-6 score: 26.0 coord: 579..613 e-value: 1.5E-6 score: 26.0 coord: 649..683 e-value: 4.8E-11 score: 40.1 coord: 544..578 e-value: 1.0E-7 score: 29.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 425..482 e-value: 1.7E-5 score: 24.7
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 502..532 e-value: 3.3E-15 score: 55.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 611..660 e-value: 1.2E-15 score: 57.3 coord: 541..589 e-value: 2.1E-17 score: 62.9 coord: 261..310 e-value: 3.7E-16 score: 58.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 227..261 score: 9.482
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 367..401 score: 6.456
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 437..471 score: 7.552
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 332..362 score: 5.634
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 192..226 score: 5.229
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 472..506 score: 11.488
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 402..436 score: 8.199
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 297..331 score: 13.176
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 612..646 score: 12.09
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 647..681 score: 13.987
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 577..611 score: 11.794
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 262..296 score: 12.682
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 507..541 score: 13.57
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 542..576 score: 11.893
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 593..695 e-value: 6.0E-30 score: 105.9 coord: 490..592 e-value: 4.5E-33 score: 116.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 289..364 e-value: 2.5E-17 score: 65.0 coord: 367..467 e-value: 1.2E-8 score: 36.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 128..288 e-value: 7.9E-20 score: 73.6
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 518..537 coord: 610..673
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..67
None	No IPR available	PANTHER	PTHR24015:SF1057	SUBFAMILY NOT NAMED	coord: 79..689
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 79..689

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi01G000768	Csa3G165700	Cucumber (Chinese Long) v2	cuwgoB269
Bhi01G000768	MELO3C006701	Melon (DHL92) v3.5.1	mewgoB529
Bhi01G000768	CSPI03G14850	Wild cucumber (PI 183967)	cpiwgoB269
Bhi01G000768	Cucsa.252670	Cucumber (Gy14) v1	cgywgoB522
Bhi01G000768	CmaCh06G015540	Cucurbita maxima (Rimu)	cmawgoB1006
Bhi01G000768	CmaCh00G004290	Cucurbita maxima (Rimu)	cmawgoB0001
Bhi01G000768	CmoCh06G015530	Cucurbita moschata (Rifu)	cmowgoB1005
Bhi01G000768	Lsi05G015790	Bottle gourd (USVL1VR-Ls)	lsiwgoB432
Bhi01G000768	Cp4.1LG08g05250	Cucurbita pepo (Zucchini)	cpewgoB1110
Bhi01G000768	CsGy3G014960	Cucumber (Gy14) v2	cgybwgoB257
Bhi01G000768	MELO3C006701.2	Melon (DHL92) v3.6.1	medwgoB530
Bhi01G000768	Carg23743	Silver-seed gourd	carwgoB1105
Bhi01G000768	CsaV3_3G015050	Cucumber (Chinese Long) v3	cucwgoB272

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi01G000768	Wax gourd	wgowgoB025
Bhi01G000768	Cucumber (Gy14) v2	cgybwgoB533
Bhi01G000768	Cucurbita maxima (Rimu)	cmawgoB0328
Bhi01G000768	Cucurbita maxima (Rimu)	cmawgoB0473
Bhi01G000768	Cucurbita maxima (Rimu)	cmawgoB1107
Bhi01G000768	Cucurbita moschata (Rifu)	cmowgoB0317
Bhi01G000768	Cucurbita moschata (Rifu)	cmowgoB0472
Bhi01G000768	Cucurbita moschata (Rifu)	cmowgoB1104
Bhi01G000768	Cucurbita pepo (Zucchini)	cpewgoB0188
Bhi01G000768	Cucurbita pepo (Zucchini)	cpewgoB0398
Bhi01G000768	Cucurbita pepo (Zucchini)	cpewgoB0783
Bhi01G000768	Wild cucumber (PI 183967)	cpiwgoB563
Bhi01G000768	Cucumber (Chinese Long) v3	cucwgoB576
Bhi01G000768	Cucumber (Chinese Long) v2	cuwgoB558
Bhi01G000768	Bottle gourd (USVL1VR-Ls)	lsiwgoB041
Bhi01G000768	Bottle gourd (USVL1VR-Ls)	lsiwgoB315
Bhi01G000768	Melon (DHL92) v3.6.1	medwgoB106
Bhi01G000768	Melon (DHL92) v3.5.1	mewgoB105
Bhi01G000768	Watermelon (Charleston Gray)	wcgwgoB426
Bhi01G000768	Watermelon (Charleston Gray)	wcgwgoB521
Bhi01G000768	Watermelon (97103) v2	wgowmbB178
Bhi01G000768	Watermelon (97103) v2	wgowmbB203
Bhi01G000768	Watermelon (97103) v1	wgowmB201
Bhi01G000768	Watermelon (97103) v1	wgowmB238
Bhi01G000768	Silver-seed gourd	carwgoB0086
Bhi01G000768	Silver-seed gourd	carwgoB0365
Bhi01G000768	Silver-seed gourd	carwgoB0828