ClCG05G006410 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G006410
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Pentatricopeptide repeat-containing protein, putative
Location	CG_Chr05 : 6406048 .. 6409807 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAGTGAGGCTGTCATGTTTTTGAGTAAAATTGGCAAGAAAGGTTATGTACCGGACAGTTCAATCTTCAGTGTCACCTTGGCATGTGTATTAAAGAAGCTAGACCTGAAGGAAACATGCAGGTATTTGATAAATGTGTGTAGAGAGGTGTCAAGCCAGGGTTCAGTACATATCTTACACTTATTGAAGCTCTGTACAAGACAGGGAAAATGGAGATTGGAAACCAATATATAGATAGGATAATAAATGATGGTCTTATTTCCAGCGTATATTCATATAACATGGTCATTGATTGCCTTTGCAAAGGCAAATTAATGGACAGAGCATCGGAAATCTTTAGGGATCTGCACTATAAAGGTATTTCTCCAAATGTTGTAACTTATAATACACTTATCAGTGGCTATTGCAGAAATGGAAATATGGAAAAAGCTCAGGAACTTCTTGAAATGCTATTAGATTGTCGTTTTAAACCAGATATCTTCACATTTAATTCATTAATTGATGGCCTCTGTCAAGCACATAAGCATGAGGATGCTTTTGGTTGTTTCACTGAAATGGTTGAGTGGGATGTCACTCCGGATGCTATCACATATAATATATTGATACGTTCCTTCTGTGTGATTGGAGATGTTTCTAGATCTACTCATCTCTTGAGAGAAATGAAACTTCATGGTATACAACCTGATACTTTCTCCTTCAATGCTCTTATCCAAAGCTACTTTCGAATGACAGGGTTCAGAAAGTTGAGAAGCTTTTTGATTCAATGTTAAGGTTGGGTATACAGCCCGACAACTATACATATGCTGCTCTTATTAAGTCACCGTGCAAATTGGGTAGGCATGATGAGGCAAGGGAGATGTTTCTCTCAATGAAGGTGAATGGTTGTACTCCTGACTCGTATACTTGCATTCTTGTGAACGACACTGTTGCCCATATTTAGATCTTTATGAGAATGCTAAGAAATTGTGAAGATTGAAGAAAATATGACGACAATAACATTTTATAAAAACCTTAGAAATTGGAATTGGCTGTTTATTGGTATATTCTCATGACGTTTCCCATTTCTGAGTACTGTCAAAATGAAAAGTGTTCCATGTTTCAGAGAGAGGAGGTCAAGTGATTCACATTTCATTTGATGTTTAGAAGCAGTTTGGTGAATTTTCAGACTCCAAATGTTATTTTGGTCAAATAGAAGTGTTGGTGAATTATTCAAGGTGCACAAGCAAGCTTGAATATCCACAGTTATTCAAAAAAACATTCTGGTGTTCTAAATCTTGATGCTTGGCTGCTGGGACTGGGAGCATAAAACTTAAGCTGCTATCGTTATCTTCGTTTACAAGCATGTGTAGGTGTGTAATAAGGCATAATCACTTCCAATTTGGCTCCTCTTATTCTCTAACAGTGTAGATGAAACTCCAAAGGTCATTACTTGGGGGGACAAAACTTACCATCTGCCCCCTGCATCATCCTGCTGGCATTGTATGAGGCTTTAGAATTCTACAGCTTATTTCTGCTGTTGTCTTGGAGTTCCTTCTACAGTGGGAAAAACAGAAAGTTCCATATAATGGTACAACTGTCCTTCATGTGACCTTAATACAACTTATCAAATTTTCAATACGGGGAAAGTACTTTATTGGTTGCCAATGGGAAAAGGGGATCATATGTTATCTTACTATGAATTTACTCTGCAAAGGAGTCCAAGTTTGAAGAGCTTATACTCTGATTTCTCTGTAACTATTAGCCGAAGCTTGATTTGACAACTGGTATTTCAGATCACGAATCAGGTTTTTGAATAATATGCGAGACATTGGGGACTTTCTTACCACTTTTGTCACCAATAGAAATGAAAACAAAATTACAAGAAATCTTGATGTCAGTATTCTCTTGTGCTATTCCATTTTCCCTTTTCTGTTTATTATGTCCGAATGATGAATGCCATAAAAAGGACTTGACATGGGTTTTTCTATTGGATTTTGAAGGGGCATTTGGACTGTTGGTTTCACATTTAGCTTTTATGATGGAGATAGCATAGCAGTGTTAAAGTTGGCTTGTATCTGCCTTTGCTTTTCTCTTTGCAGATAGGTAGGTTGCAGAGGATTATAATTTCTTCCTTTAATTGGATTTCTTATAATTGGCGTTTGATTGTAGTTAACACTATTGATAGGTTAGGTGGATAAAGTTGTATGTGCAATGGACGCCTCAGGTTCTGACCTTGTTGAAACATTCTCCAGGAACTTGCTGTGTCTGGGTCTTGTGAAGATGCTGTCCTTGTGAATAGAGGTAACATTCCGATTACATAACTCATTACATGCATTCTGTTTATAGACATCACACGATACTTCCTTTTATTCACGTGGGCTAACTAGCTTTAAAGAAATTACTGAACCTAGGATAGTTATTATATTCAACTAAAGACTTCGATACCAAAGAGCAAAAACTAAGGGGGAGGGGACGACAAAAAGGAGAGATAAAACAGAAAGATGCAAGAAGCCTTAAATCTCTGCAAAACAAAAGGGTGAGTCCAAACAAACACAACAATCCAAAGAACATCAATTAGAGGCACCCAAAAAGGGACAAAAAAACCATTCCAAGAGCACCATCGGGTGATCCAAAAAACAATCAATACAAAGGGACAGCCTAGTAGGAGGGTGGTTTAATATTCAAGTCCTGTTTAGACTTTAGATTTCCTTTAACCATTATATTTTCTCTAGTTAGTCTACAGTTTCTTGTACAAAAGAGTGGAAAAGTTTCCACTAAATTGTGCAAAGGAATCTGGAGCAAACCCACTAGATTATTATTATTATTATTATTATTATTATTTTTATTTCTAATTTTATATTAATGAACATAAAAGGCTTTGTGGTTGGGAGTCAGTAGCAGTGATTATGTCCACAAATCTCATTCTAGATTTTGAGAGGGTAAAAAATATATTGCTGTATCTTAGCTGTGCAACTTAGGTCTTTTTATTTAGAAAAGTGACCAATAGCCTATTACGTATCTGGAGAGAATAATGACAATAAAGACTAAATATTAACAACTAATATTTACACAAAATTAAAAGAAATTCTAACACTGTCCTTCAAGTTGGTTTAAAGATATCTTTCATGATCAACTTGTCAATTAATTTGTCAATAGTCCATCCTCATTACCCTAGAATTTTCTGGACATCGAAATGCTGCTGGGCGTTGTTCATTGTCGCCTCCACCAGCCACGTCGTTCATTTCTTTGAAGAGTTTCACAGCCTCGCTGTTCGTTGAAGAGTTTTAGTGGCCATTTGCTGCCTTGTTGAAGTGCCTCACGGTCACGGTAGATAATAGGCAGTAATCTTAGGAAACTTTTAGTGGCCTCCCCCACCCATTCAAAGTTAGAGTGGACAATTTATATGCCTCTTTAAATTGTTTGGGTTTCAATGGAGAACCATTCTTTAGTAATTTTCGGCATTGAAATTCAATGATTAAATACGATGAACCTTATTATCATCCAAAATGAAAAAACAAAAAATCAAGTGTCAATTTCTGTAAATTTAAAAATCTTGATTCTGCGTTCCACCTCCATATGGAACAGTACTTCATTCATGGGGAGATTCCACCTATGTTCAAACGAGGCGGCATCTTTAAATTGTTTGGAACAATATGAAGTCTGAATTTTGGAATCTATTTCCAAAATTTTAGGTATTTCTTAATCTCGTGAAGTTGAGGCGGGAAACAACCAAGGCAATGAAACTCTGATGATTGATGGAGGCTGCGACAACAGATGA

mRNA sequence

ATGGCCAGTGAGGCTGTCATGTTTTTGAGTAAAATTGGCAAGAAAGGTTATGTACCGGACAGTTCAATCTTCAGTGTCACCTTGGCATGTGTATTAAAGAAGCTAGACCTGAAGGAAACATGCAGGTATTTGATAAATAGAGGTGTCAAGCCAGGGTTCAGTACATATCTTACACTTATTGAAGCTCTGTACAAGACAGGGAAAATGGAGATTGGAAACCAATATATAGATAGGATAATAAATGATGGTCTTATTTCCAGCGTATATTCATATAACATGGTCATTGATTGCCTTTGCAAAGGCAAATTAATGGACAGAGCATCGGAAATCTTTAGGGATCTGCACTATAAAGGTATTTCTCCAAATGTTGTAACTTATAATACACTTATCAGTGGCTATTGCAGAAATGGAAATATGGAAAAAGCTCAGGAACTTCTTGAAATGCTATTAGATTGTCGTTTTAAACCAGATATCTTCACATTTAATTCATTAATTGATGGCCTCTGTCAAGCACATAAGCATGAGGATGCTTTTGGTTGTTTCACTGAAATGGTTGAGTGGGATGTCACTCCGGATGCTATCACATATAATATATTGATACGTTCCTTCTGTGTGATTGGAGATGTTTCTAGATCTACTCATCTCTTGAGAGAAATGAAACTTCATGGTATACAACCTGATACTTTCTCCTTCAATGCTCTTATCCAAAGCTACTTTCGAATGACAGGGTTCAGAAAGTTGGGTATACAGCCCGACAACTATACATATGCTGCTCTTATTAAGTCACCGTGCAAATTGGGTAGGCATGATGAGGCAAGGGAGATGTTTCTCTCAATGAAGGTGAATGGTTGTACTCCTGACTCGTATACTTGCATTCTTGTGAACGACACTCTTATTTCTGCTGTTGTCTTGGAGTTCCTTCTACAGTGGGAAAAACAGAAAGTTCCATATAATGGTACAACTGTCCTTCATGAACTTGCTGTGTCTGGGTCTTGTGAAGATGCTGTCCTTGTGAATAGAGTTGAGGCGGGAAACAACCAAGGCAATGAAACTCTGATGATTGATGGAGGCTGCGACAACAGATGA

Coding sequence (CDS)

ATGGCCAGTGAGGCTGTCATGTTTTTGAGTAAAATTGGCAAGAAAGGTTATGTACCGGACAGTTCAATCTTCAGTGTCACCTTGGCATGTGTATTAAAGAAGCTAGACCTGAAGGAAACATGCAGGTATTTGATAAATAGAGGTGTCAAGCCAGGGTTCAGTACATATCTTACACTTATTGAAGCTCTGTACAAGACAGGGAAAATGGAGATTGGAAACCAATATATAGATAGGATAATAAATGATGGTCTTATTTCCAGCGTATATTCATATAACATGGTCATTGATTGCCTTTGCAAAGGCAAATTAATGGACAGAGCATCGGAAATCTTTAGGGATCTGCACTATAAAGGTATTTCTCCAAATGTTGTAACTTATAATACACTTATCAGTGGCTATTGCAGAAATGGAAATATGGAAAAAGCTCAGGAACTTCTTGAAATGCTATTAGATTGTCGTTTTAAACCAGATATCTTCACATTTAATTCATTAATTGATGGCCTCTGTCAAGCACATAAGCATGAGGATGCTTTTGGTTGTTTCACTGAAATGGTTGAGTGGGATGTCACTCCGGATGCTATCACATATAATATATTGATACGTTCCTTCTGTGTGATTGGAGATGTTTCTAGATCTACTCATCTCTTGAGAGAAATGAAACTTCATGGTATACAACCTGATACTTTCTCCTTCAATGCTCTTATCCAAAGCTACTTTCGAATGACAGGGTTCAGAAAGTTGGGTATACAGCCCGACAACTATACATATGCTGCTCTTATTAAGTCACCGTGCAAATTGGGTAGGCATGATGAGGCAAGGGAGATGTTTCTCTCAATGAAGGTGAATGGTTGTACTCCTGACTCGTATACTTGCATTCTTGTGAACGACACTCTTATTTCTGCTGTTGTCTTGGAGTTCCTTCTACAGTGGGAAAAACAGAAAGTTCCATATAATGGTACAACTGTCCTTCATGAACTTGCTGTGTCTGGGTCTTGTGAAGATGCTGTCCTTGTGAATAGAGTTGAGGCGGGAAACAACCAAGGCAATGAAACTCTGATGATTGATGGAGGCTGCGACAACAGATGA

Protein sequence

MASEAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYLINRGVKPGFSTYLTLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYTCILVNDTLISAVVLEFLLQWEKQKVPYNGTTVLHELAVSGSCEDAVLVNRVEAGNNQGNETLMIDGGCDNR

Homology

[Close]

BLAST of ClCG05G006410 vs. Swiss-Prot
Match: PP239_ARATH (Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS=Arabidopsis thaliana GN=PPR40 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 4.4e-80
Identity = 148/309 (47.90%), Postives = 209/309 (67.64%), Query Frame = 1


Query: 1   MASEAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYL---INRGVKPGFSTYL 60
           MA E   FL KIG++GY+PDSS F+  ++C+LK  DL ETCR     ++RGVKPGF+ YL
Sbjct: 335 MAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYL 394

Query: 61  TLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYK 120
            L++AL    +   G++Y+ ++  DGL+SSVYSYN VIDCLCK + ++ A+    ++  +
Sbjct: 395 VLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDR 454

Query: 121 GISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDA 180
           GISPN+VT+NT +SGY   G+++K   +LE LL   FKPD+ TF+ +I+ LC+A + +DA
Sbjct: 455 GISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDA 514

Query: 181 FGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQS 240
           F CF EM+EW + P+ ITYNILIRS C  GD  RS  L  +MK +G+ PD +++NA IQS
Sbjct: 515 FDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQS 574

Query: 241 YFRMTGFRK----------LGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPD 297
           + +M   +K          +G++PDN+TY+ LIK+  + GR  EAREMF S++ +GC PD
Sbjct: 575 FCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPD 634

HSP 2 Score: 94.4 bits (233), Expect = 2.8e-18
Identity = 76/316 (24.05%), Postives = 137/316 (43.35%), Query Frame = 1


Query: 28  LACVL----KKLDLKETCRYLINR----GVKPGFSTYLTLIEALYKTGKMEIGNQYIDRI 87
           L CVL     +L L + C  +  +    G+KP    Y  +I+AL K+  +++      ++
Sbjct: 147 LMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQM 206

Query: 88  INDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGISPNVVTYNTLISGYCRNGNM 147
            +DG     ++YN++I  +CK  ++D A  + + +  +G  PNV TY  LI G+   G +
Sbjct: 207 RSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRV 266

Query: 148 EKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFTEMVEWDVTPDAITYNIL 207
           ++A + LEM+   +  P+  T  + + G+ +      AF      +E D     + Y+ +
Sbjct: 267 DEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAV 326

Query: 208 IRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNA----------LIQSYFRMTGFRKLGI 267
           +           +   LR++   G  PD+ +FNA          L+++     GF   G+
Sbjct: 327 LYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGV 386

Query: 268 QPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYTCILVNDTLISAVVLE---- 322
           +P    Y  L+++     R  E       M V+G     Y+   V D L  A  +E    
Sbjct: 387 KPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAM 446

HSP 3 Score: 71.2 bits (173), Expect = 2.5e-11
Identity = 54/254 (21.26%), Postives = 101/254 (39.76%), Query Frame = 1


Query: 62  ALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGISP 121
           AL++ G + +  + +  I + G   S     ++I    +  L    +++F  + + G+ P
Sbjct: 119 ALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKP 178

Query: 122 NVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCF 181
           +   YN +I    ++ +++ A    + +     KPD FT+N LI G+C+    ++A    
Sbjct: 179 STRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLV 238

Query: 182 TEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSYFR- 241
            +M +    P+  TY ILI  F + G V  +   L  M++  + P+  +    +   FR 
Sbjct: 239 KQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRC 298

Query: 242 ---------MTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYT- 300
                    + GF +         Y A++          E  +    +   G  PDS T 
Sbjct: 299 LPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTF 358

HSP 4 Score: 65.5 bits (158), Expect = 1.4e-09
Identity = 53/190 (27.89%), Postives = 84/190 (44.21%), Query Frame = 1


Query: 17  YVPDSSIFSVTLACVLKKLDL---KETCRYLINRGVKPGFSTYLTLIEALYKTGKMEIGN 76
           Y  D S+ SV    + +K  L    E  + + + G +        LI +  + G  +  N
Sbjct: 106 YAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCN 165

Query: 77  QYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGISPNVVTYNTLISGY 136
               +I   G+  S   YN VID L K   +D A   F+ +   G  P+  TYN LI G 
Sbjct: 166 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV 225

Query: 137 CRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFTEMVEWDVTPDA 196
           C+ G +++A  L++ +     +P++FT+  LIDG   A + ++A      M    + P+ 
Sbjct: 226 CKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNE 285

Query: 197 ITYNILIRSF 204
            T    IR+F
Sbjct: 286 AT----IRTF 291

[Close]

BLAST of ClCG05G006410 vs. Swiss-Prot
Match: PP306_ARATH (Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 7.1e-38
Identity = 93/331 (28.10%), Postives = 165/331 (49.85%), Query Frame = 1


Query: 9   LSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYLINRG---VKPGFSTYLTLIEALYK 68
           L ++ + G+ P+  I++  +    KK ++++        G   +     TY  LI  L+K
Sbjct: 186 LIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245

Query: 69  TGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGISPNVVT 128
            G  + G +  +++  DG+  ++Y+YN V++ LCK      A ++F ++  +G+S N+VT
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVT 305

Query: 129 YNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFTEMV 188
           YNTLI G CR   + +A ++++ +      P++ T+N+LIDG C   K   A     ++ 
Sbjct: 306 YNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLK 365

Query: 189 EWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSYFRMTGFR 248
              ++P  +TYNIL+  FC  GD S +  +++EM+  GI+P   ++  LI ++ R     
Sbjct: 366 SRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNME 425

Query: 249 K----------LGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYTCILVN 308
           K          LG+ PD +TY+ LI   C  G+ +EA  +F SM    C P        N
Sbjct: 426 KAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEP--------N 485

Query: 309 DTLISAVVLEFLLQWEKQKVPYNGTTVLHEL 327
           + + + ++L +     K+   Y    +L E+
Sbjct: 486 EVIYNTMILGYC----KEGSSYRALKLLKEM 504

HSP 2 Score: 129.4 bits (324), Expect = 7.9e-29
Identity = 87/323 (26.93%), Postives = 157/323 (48.61%), Query Frame = 1


Query: 7   MFLSKIGKKGY-----VPDSSIFS--VTLACVLKKL-------DLKETCRYLINRGVKPG 66
           +F + + K+G+     + +  +F    T  CV+ +L       D  +    +  RGV   
Sbjct: 243 LFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCN 302

Query: 67  FSTYLTLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFR 126
             TY TLI  L +  K+   N+ +D++ +DG+  ++ +YN +ID  C    + +A  + R
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362

Query: 127 DLHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAH 186
           DL  +G+SP++VTYN L+SG+CR G+   A ++++ + +   KP   T+  LID   ++ 
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422

Query: 187 KHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFN 246
             E A      M E  + PD  TY++LI  FC+ G ++ ++ L + M     +P+   +N
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482

Query: 247 ALIQSYFRM-TGFRKL---------GIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVN 302
            +I  Y +  + +R L          + P+  +Y  +I+  CK  +  EA  +   M  +
Sbjct: 483 TMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS 542

HSP 3 Score: 102.4 bits (254), Expect = 1.0e-20
Identity = 64/246 (26.02%), Postives = 120/246 (48.78%), Query Frame = 1


Query: 5   AVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYLINRGVKPGFSTYL--TLIEA 64
           ++ + +++   G+VP S+ F+  L  V+      +   +      K     Y    LI+ 
Sbjct: 113 SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKG 172

Query: 65  LYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGISPN 124
             + G++E     +  +   G   +V  Y  +ID  CK   +++A ++F ++   G+  N
Sbjct: 173 CCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVAN 232

Query: 125 VVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFT 184
             TY  LI+G  +NG  ++  E+ E + +    P+++T+N +++ LC+  + +DAF  F 
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292

Query: 185 EMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSYFRMT 244
           EM E  V+ + +TYN LI   C    ++ +  ++ +MK  GI P+  ++N LI  +    
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF---C 352

Query: 245 GFRKLG 249
           G  KLG
Sbjct: 353 GVGKLG 355

HSP 4 Score: 58.2 bits (139), Expect = 2.2e-07
Identity = 44/205 (21.46%), Postives = 84/205 (40.98%), Query Frame = 1


Query: 91  YNMVIDCLCKGKLMDRASEIFRDLHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLL 150
           Y ++I+   + + ++ +   F ++   G  P    +N L++    + +  +         
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156

Query: 151 DCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVS 210
             +   D+++F  LI G C+A + E +F    E+ E+  +P+ + Y  LI   C  G++ 
Sbjct: 157 S-KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 216

Query: 211 RSTHLLREMKLHGIQPDTFSFNALIQSYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHD 270
           ++  L  EM                          KLG+  +  TY  LI    K G   
Sbjct: 217 KAKDLFFEM-------------------------GKLGLVANERTYTVLINGLFKNGVKK 275

Query: 271 EAREMFLSMKVNGCTPDSYT--CIL 294
           +  EM+  M+ +G  P+ YT  C++
Sbjct: 277 QGFEMYEKMQEDGVFPNLYTYNCVM 275

HSP 5 Score: 50.8 bits (120), Expect = 3.5e-05
Identity = 52/236 (22.03%), Postives = 89/236 (37.71%), Query Frame = 1


Query: 114 LHYKGISPNVVT----YNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLC 173
           LHY   S    T    Y  +I+ Y ++ ++  +      ++D  F P    FN L+  + 
Sbjct: 81  LHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVV 140

Query: 174 QAHKHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTF 233
            +      +  F E     V  D  ++ ILI+  C  G++ +S  LL E+          
Sbjct: 141 GSSSFNQWWSFFNENKS-KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELT--------- 200

Query: 234 SFNALIQSYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSY 293
                           + G  P+   Y  LI   CK G  ++A+++F  M   G   +  
Sbjct: 201 ----------------EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANER 260

Query: 294 T-CILVNDTLISAVVLEFLLQWEKQKVP------YNGTTVLHELAVSGSCEDAVLV 339
           T  +L+N    + V  +    +EK +        Y    V+++L   G  +DA  V
Sbjct: 261 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQV 290

[Close]

BLAST of ClCG05G006410 vs. Swiss-Prot
Match: PP120_ARATH (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 7.8e-37
Identity = 102/349 (29.23%), Postives = 164/349 (46.99%), Query Frame = 1


Query: 4   EAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRY---LINRGVKPGFSTYLTLI 63
           E    L K+ K+G +P+   +++ +  + ++ +L    R    LI +G KP   TY  LI
Sbjct: 234 ECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLI 293

Query: 64  EALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGIS 123
             L K  K +    Y+ +++N+GL    Y+YN +I   CKG ++  A  I  D  + G  
Sbjct: 294 YGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFV 353

Query: 124 PNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGC 183
           P+  TY +LI G C  G   +A  L    L    KP++  +N+LI GL       +A   
Sbjct: 354 PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQL 413

Query: 184 FTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSY-- 243
             EM E  + P+  T+NIL+   C +G VS +  L++ M   G  PD F+FN LI  Y  
Sbjct: 414 ANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473

Query: 244 -FRMTGFRKL-------GIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYT 303
             +M    ++       G+ PD YTY +L+   CK  + ++  E + +M   GC P+ +T
Sbjct: 474 QLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFT 533

Query: 304 CILVNDTLISAVVLEFLLQW--EKQKVPYNGTTVLHELAVSGSCEDAVL 338
             ++ ++L     L+  L    E +    N   V     + G C++  L
Sbjct: 534 FNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL 582

HSP 2 Score: 127.5 bits (319), Expect = 3.0e-28
Identity = 81/307 (26.38%), Postives = 144/307 (46.91%), Query Frame = 1


Query: 15  KGYVPDSSIFSVTLACVLKK---LDLKETCRYLINRGVKPGFSTYLTLIEALYKTGKMEI 74
           KG  P+  +++  +  +  +   L+  +    +  +G+ P   T+  L+  L K G +  
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444

Query: 75  GNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGISPNVVTYNTLIS 134
            +  +  +I+ G    ++++N++I        M+ A EI   +   G+ P+V TYN+L++
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN 504

Query: 135 GYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFTEMVEWDVTP 194
           G C+    E   E  + +++    P++FTFN L++ LC+  K ++A G   EM    V P
Sbjct: 505 GLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564

Query: 195 DAITYNILIRSFCVIGDVSRSTHLLREM-KLHGIQPDTFSFNALIQSY---FRMTGFRKL 254
           DA+T+  LI  FC  GD+  +  L R+M + + +   T ++N +I ++     +T   KL
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKL 624

Query: 255 -------GIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYT------CILV 302
                   + PD YTY  ++   CK G  +   +  L M  NG  P   T      C+ V
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCV 684

HSP 3 Score: 115.9 bits (289), Expect = 9.0e-25
Identity = 72/257 (28.02%), Postives = 123/257 (47.86%), Query Frame = 1


Query: 44  LINRGVKPGFSTYLTLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKL 103
           ++  GV    ST+  L+  L K G ++   + +D++I  G++ ++++YN+ I  LC+   
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266

Query: 104 MDRASEIFRDLHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNS 163
           +D A  +   L  +G  P+V+TYN LI G C+N   ++A+  L  +++   +PD +T+N+
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326

Query: 164 LIDGLCQAHKHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHG 223
           LI G C+    + A     + V     PD  TY  LI   C  G+ +R+  L  E    G
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG 386

Query: 224 IQPDTFSFNALIQSYFRM----------TGFRKLGIQPDNYTYAALIKSPCKLGRHDEAR 283
           I+P+   +N LI+                   + G+ P+  T+  L+   CK+G   +A 
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446

Query: 284 EMFLSMKVNGCTPDSYT 291
            +   M   G  PD +T
Sbjct: 447 GLVKVMISKGYFPDIFT 463

HSP 4 Score: 107.1 bits (266), Expect = 4.2e-22
Identity = 60/224 (26.79%), Postives = 109/224 (48.66%), Query Frame = 1


Query: 15  KGYVPDSSIFSVTLACVLKKLDLKETCRYLIN---RGVKPGFSTYLTLIEALYKTGKMEI 74
           +G  PD   F++ +    K        R L N   +G +     Y T++   Y+      
Sbjct: 140 RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAE 199

Query: 75  GNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGISPNVVTYNTLIS 134
           G +   +++  G+   + ++N ++  LCK   +    ++   +  +G+ PN+ TYN  I 
Sbjct: 200 GYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQ 259

Query: 135 GYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFTEMVEWDVTP 194
           G C+ G ++ A  ++  L++   KPD+ T+N+LI GLC+  K ++A     +MV   + P
Sbjct: 260 GLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEP 319

Query: 195 DAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALI 236
           D+ TYN LI  +C  G V  +  ++ +   +G  PD F++ +LI
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363

[Close]

BLAST of ClCG05G006410 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 4.3e-35
Identity = 92/301 (30.56%), Postives = 147/301 (48.84%), Query Frame = 1


Query: 9   LSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYLIN---RGVKPGFSTYLTLIEALYK 68
           L  +  KG  P+   ++V +  + ++  +KE    L     RG      TY TLI+   K
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322

Query: 69  TGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGISPNVVT 128
            G           ++  GL  SV +Y  +I  +CK   M+RA E    +  +G+ PN  T
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382

Query: 129 YNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFTEMV 188
           Y TL+ G+ + G M +A  +L  + D  F P + T+N+LI+G C   K EDA     +M 
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442

Query: 189 EWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSYFRMTGFR 248
           E  ++PD ++Y+ ++  FC   DV  +  + REM   GI+PDT ++++LIQ +      +
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502

Query: 249 ----------KLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYT-CILV 296
                     ++G+ PD +TY ALI + C  G  ++A ++   M   G  PD  T  +L+
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562

HSP 2 Score: 131.0 bits (328), Expect = 2.7e-29
Identity = 86/324 (26.54%), Postives = 153/324 (47.22%), Query Frame = 1


Query: 5   AVMFLSKIGKKGYVPDSSIFSVTLA--CVLKKLDLK-ETCRYLINRGVKPGFSTYLTLIE 64
           A+    K+  KG +P+   ++  +   C L+K+D   +  R +  +G++P   +Y  +I 
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283

Query: 65  ALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGISP 124
            L + G+M+  +  +  +   G      +YN +I   CK     +A  +  ++   G++P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343

Query: 125 NVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCF 184
           +V+TY +LI   C+ GNM +A E L+ +      P+  T+ +L+DG  Q     +A+   
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403

Query: 185 TEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSYFRM 244
            EM +   +P  +TYN LI   CV G +  +  +L +MK  G+ PD  S++ ++  + R 
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463

Query: 245 TGFRKL----------GIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYTC 304
               +           GI+PD  TY++LI+  C+  R  EA +++  M   G  PD +T 
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523

Query: 305 ILVNDTLISAVVLEFLLQWEKQKV 316
             + +       LE  LQ   + V
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMV 547

HSP 3 Score: 119.8 bits (299), Expect = 6.2e-26
Identity = 91/361 (25.21%), Postives = 159/361 (44.04%), Query Frame = 1


Query: 16  GYVPDSSIFSVTL-ACVLKKLDL---KETCRYLINRGVKPGFSTYLTLIEALYKTGKMEI 75
           G++P    ++  L A +  K ++   +   + ++   V P   TY  LI      G +++
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223

Query: 76  GNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGISPNVVTYNTLIS 135
                D++   G + +V +YN +ID  CK + +D   ++ R +  KG+ PN+++YN +I+
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283

Query: 136 GYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFTEMVEWDVTP 195
           G CR G M++   +L  +    +  D  T+N+LI G C+      A     EM+   +TP
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343

Query: 196 DAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSYFRMTGFRKLGIQP 255
             ITY  LI S C  G+++R+   L +M++                          G+ P
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVR-------------------------GLCP 403

Query: 256 DNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYTC-ILVNDTLISAVVLEFLLQW 315
           +  TY  L+    + G  +EA  +   M  NG +P   T   L+N   ++  + + +   
Sbjct: 404 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 463

Query: 316 EKQKVP-YNGTTVLHELAVSGSC-----EDAVLVNR--VEAGNNQGNETL--MIDGGCDN 362
           E  K    +   V +   +SG C     ++A+ V R  VE G      T   +I G C+ 
Sbjct: 464 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 499

HSP 4 Score: 116.7 bits (291), Expect = 5.3e-25
Identity = 81/288 (28.12%), Postives = 130/288 (45.14%), Query Frame = 1


Query: 3   SEAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYLI---NRGVKPGFSTYLTL 62
           + A+ FL ++  +G  P+   ++  +    +K  + E  R L    + G  P   TY  L
Sbjct: 362 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421

Query: 63  IEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGI 122
           I     TGKME     ++ +   GL   V SY+ V+   C+   +D A  + R++  KGI
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481

Query: 123 SPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFG 182
            P+ +TY++LI G+C     ++A +L E +L     PD FT+ +LI+  C     E A  
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541

Query: 183 CFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSYF 242
              EMVE  V PD +TY++LI           +  LL ++      P   +++ LI++  
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601

Query: 243 RMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPD 288
            +          +  +  +LIK  C  G   EA ++F SM      PD
Sbjct: 602 NI----------EFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639

HSP 5 Score: 103.2 bits (256), Expect = 6.0e-21
Identity = 67/222 (30.18%), Postives = 103/222 (46.40%), Query Frame = 1


Query: 89  YSYNMVIDCLCKG----KLMDRASEIFRDLHYKGISPNVVTYNTLISGYCRNG-NMEKAQ 148
           YS + V D + K      L+D+A  I       G  P V++YN ++    R+  N+  A+
Sbjct: 131 YSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAE 190

Query: 149 ELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFTEMVEWDVTPDAITYNILIRSF 208
            + + +L+ +  P++FT+N LI G C A   + A   F +M      P+ +TYN LI  +
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250

Query: 209 CVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSY----------FRMTGFRKLGIQPDN 268
           C +  +     LLR M L G++P+  S+N +I             F +T   + G   D 
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310

Query: 269 YTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPD--SYTCIL 294
            TY  LIK  CK G   +A  M   M  +G TP   +YT ++
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLI 352

HSP 6 Score: 81.6 bits (200), Expect = 1.9e-14
Identity = 63/240 (26.25%), Postives = 106/240 (44.17%), Query Frame = 1


Query: 4   EAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETC---RYLINRGVKPGFSTYLTLI 63
           EA+    ++ +KG  PD+  +S  +    ++   KE C     ++  G+ P   TY  LI
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527

Query: 64  EALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGIS 123
            A    G +E   Q  + ++  G++  V +Y+++I+ L K      A  +   L Y+   
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587

Query: 124 PNVVTYN---------------TLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLI 183
           P+ VTY+               +LI G+C  G M +A ++ E +L    KPD   +N +I
Sbjct: 588 PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647

Query: 184 DGLCQAHKHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDV----SRSTHLLREMKL 222
            G C+A     A+  + EMV+       +T   L+++    G V    S   H+LR  +L
Sbjct: 648 HGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCEL 707

[Close]

BLAST of ClCG05G006410 vs. Swiss-Prot
Match: PP445_ARATH (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.8e-34
Identity = 83/257 (32.30%), Postives = 133/257 (51.75%), Query Frame = 1


Query: 44  LINRGVKPGFSTYLTLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKL 103
           ++ R V P   TY +LI+   ++G  +   + +  + + GL+   ++Y  +ID LCK K 
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512

Query: 104 MDRASEIFRDLHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNS 163
           ++ A ++F  L  KG++PNVV Y  LI GYC+ G +++A  +LE +L     P+  TFN+
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572

Query: 164 LIDGLCQAHKHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHG 223
           LI GLC   K ++A     +MV+  + P   T  ILI      GD   +    ++M   G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632

Query: 224 IQPDTFSFNALIQSYFR----------MTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAR 283
            +PD  ++   IQ+Y R          M   R+ G+ PD +TY++LIK    LG+ + A 
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692

Query: 284 EMFLSMKVNGCTPDSYT 291
           ++   M+  GC P  +T
Sbjct: 693 DVLKRMRDTGCEPSQHT 709

HSP 2 Score: 132.1 bits (331), Expect = 1.2e-29
Identity = 85/295 (28.81%), Postives = 135/295 (45.76%), Query Frame = 1


Query: 48  GVKPGFSTYLTLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRA 107
           G+KP   TY  LI++L    K E   + + +++  GL+ +V +YN +I+  CK  +++ A
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412

Query: 108 SEIFRDLHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDG 167
            ++   +  + +SPN  TYN LI GYC++ N+ KA  +L  +L+ +  PD+ T+NSLIDG
Sbjct: 413 VDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDG 472

Query: 168 LCQAHKHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPD 227
            C++   + A+   + M +  + PD  TY  +I S C    V  +  L   ++  G+ P+
Sbjct: 473 QCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPN 532

Query: 228 TFSFNALIQSYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPD 287
              + ALI  Y                         CK G+ DEA  M   M    C P+
Sbjct: 533 VVMYTALIDGY-------------------------CKAGKVDEAHLMLEKMLSKNCLPN 592

Query: 288 SYTC-ILVNDTLISAVVLEFLLQWEK------QKVPYNGTTVLHELAVSGSCEDA 336
           S T   L++       + E  L  EK      Q      T ++H L   G  + A
Sbjct: 593 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621

HSP 3 Score: 130.6 bits (327), Expect = 3.5e-29
Identity = 86/301 (28.57%), Postives = 143/301 (47.51%), Query Frame = 1


Query: 3   SEAVMFLSKIGKKGYVPDSSIFSV---TLACVLKKLDLKETCRYLINRGVKPGFSTYLTL 62
           SEA+  + ++ + G  P+   ++V   +L    K    +E    ++ +G+ P   TY  L
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL 399

Query: 63  IEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGI 122
           I    K G +E     ++ + +  L  +  +YN +I   CK  +  +A  +   +  + +
Sbjct: 400 INGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKV 459

Query: 123 SPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFG 182
            P+VVTYN+LI G CR+GN + A  LL ++ D    PD +T+ S+ID LC++ + E+A  
Sbjct: 460 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 519

Query: 183 CFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALI---- 242
            F  + +  V P+ + Y  LI  +C  G V  +  +L +M      P++ +FNALI    
Sbjct: 520 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 579

Query: 243 ------QSYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSY 291
                 ++        K+G+QP   T   LI    K G  D A   F  M  +G  PD++
Sbjct: 580 ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAH 639

HSP 4 Score: 129.0 bits (323), Expect = 1.0e-28
Identity = 85/297 (28.62%), Postives = 144/297 (48.48%), Query Frame = 1


Query: 51  PGFSTYLTLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEI 110
           P   TY  LI++L  + +       +  +   G+  ++++Y ++ID LC     ++A E+
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380

Query: 111 FRDLHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQ 170
              +  KG+ PNV+TYN LI+GYC+ G +E A +++E++   +  P+  T+N LI G C+
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440

Query: 171 AHKHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFS 230
           ++ H+ A G   +M+E  V PD +TYN LI   C  G+   +  LL  M           
Sbjct: 441 SNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM----------- 500

Query: 231 FNALIQSYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYT 290
                            G+ PD +TY ++I S CK  R +EA ++F S++  G  P+   
Sbjct: 501 --------------NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM 560

Query: 291 CILVNDTLISA-------VVLEFLLQWEKQKVPYNGT--TVLHELAVSGSCEDAVLV 339
              + D    A       ++LE +L   K  +P + T   ++H L   G  ++A L+
Sbjct: 561 YTALIDGYCKAGKVDEAHLMLEKML--SKNCLPNSLTFNALIHGLCADGKLKEATLL 589

HSP 5 Score: 109.4 bits (272), Expect = 8.4e-23
Identity = 83/336 (24.70%), Postives = 143/336 (42.56%), Query Frame = 1


Query: 4   EAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYLIN---RGVKPGFSTYLTLI 63
           EA  ++SKI + G  PD   ++  +    ++ DL    +       +G +     Y  LI
Sbjct: 236 EANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLI 295

Query: 64  EALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGIS 123
             L    +++       ++ +D    +V +Y ++I  LC  +    A  + +++   GI 
Sbjct: 296 HGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK 355

Query: 124 PNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGC 183
           PN+ TY  LI   C     EKA+ELL  +L+    P++ T+N+LI+G C+    EDA   
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415

Query: 184 FTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSYFR 243
              M    ++P+  TYN LI+ +C   +V ++  +L +M    + PD  ++N+LI     
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLID---- 475

Query: 244 MTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYTCILVNDTLIS 303
                                  C+ G  D A  +   M   G  PD +T   + D+L  
Sbjct: 476 ---------------------GQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 535

Query: 304 AVVLE---FLLQWEKQKVPYNGTTVLHELAVSGSCE 334
           +  +E    L    +QK   N   V++   + G C+
Sbjct: 536 SKRVEEACDLFDSLEQK-GVNPNVVMYTALIDGYCK 544

HSP 6 Score: 105.1 bits (261), Expect = 1.6e-21
Identity = 75/290 (25.86%), Postives = 133/290 (45.86%), Query Frame = 1


Query: 4   EAVMFLSKIGKKGYVPDSSIFSVTL--ACVLKKLDLKETCRYLIN-RGVKPGFSTYLTLI 63
           +A+  L+K+ ++  +PD   ++  +   C     D       L+N RG+ P   TY ++I
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504

Query: 64  EALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGIS 123
           ++L K+ ++E      D +   G+  +V  Y  +ID  CK   +D A  +   +  K   
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564

Query: 124 PNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGC 183
           PN +T+N LI G C +G +++A  L E ++    +P + T   LI  L +    + A+  
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624

Query: 184 FTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSYFR 243
           F +M+     PDA TY   I+++C  G +  +  ++ +M+ +G+ PD F           
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLF----------- 684

Query: 244 MTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYT 291
                         TY++LIK    LG+ + A ++   M+  GC P  +T
Sbjct: 685 --------------TYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHT 709

HSP 7 Score: 95.9 bits (237), Expect = 9.6e-19
Identity = 65/237 (27.43%), Postives = 114/237 (48.10%), Query Frame = 1


Query: 56  YLTLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLH 115
           Y TL+ +L + G ++   Q    ++ D +  ++Y+YN +++  CK   ++ A++    + 
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 116 YKGISPNVVTYNTLISGYCRNGNMEKAQELL-EM-LLDCRFKPDIFTFNSLIDGLCQAHK 175
             G+ P+  TY +LI GYC+  +++ A ++  EM L  CR     +T   LI GLC A +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYT--HLIHGLCVARR 305

Query: 176 HEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNA 235
            ++A   F +M + +  P   TY +LI+S C     S + +L++EM+             
Sbjct: 306 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME------------- 365

Query: 236 LIQSYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYT 291
                       + GI+P+ +TY  LI S C   + ++ARE+   M   G  P+  T
Sbjct: 366 ------------ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395

HSP 8 Score: 93.6 bits (231), Expect = 4.8e-18
Identity = 86/353 (24.36%), Postives = 143/353 (40.51%), Query Frame = 1


Query: 4   EAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETC---RYLINRGVKPGFSTYLTLI 63
           EA + L K+  K  +P+S  F+  +  +     LKE       ++  G++P  ST   LI
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609

Query: 64  EALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCK-GKLMDRASEIFRDLHYKGI 123
             L K G  +       ++++ G     ++Y   I   C+ G+L+D A ++   +   G+
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD-AEDMMAKMRENGV 669

Query: 124 SPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAH------- 183
           SP++ TY++LI GY   G    A ++L+ + D   +P   TF SLI  L +         
Sbjct: 670 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGS 729

Query: 184 -----------KHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKL 243
                      + +       +MVE  VTP+A +Y  LI   C +G++  +  +   M+ 
Sbjct: 730 EPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ- 789

Query: 244 HGIQPDTFSFNALIQSYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKV 303
                                  R  GI P    + AL+   CKL +H+EA ++   M  
Sbjct: 790 -----------------------RNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMIC 849

Query: 304 NGCTPDSYTCILVNDTLISAVVLEFLLQWEKQKVPYNGTTVLHELAVSGSCED 335
            G  P   +C          ++     + EK++    GT+V   L   G  ED
Sbjct: 850 VGHLPQLESC--------KVLICGLYKKGEKER----GTSVFQNLLQCGYYED 865

HSP 9 Score: 52.8 bits (125), Expect = 9.3e-06
Identity = 28/105 (26.67%), Postives = 53/105 (50.48%), Query Frame = 1


Query: 134 CRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFTEMVEWDVTPDA 193
           CR  N ++  EL       ++K  I  +N+L++ L +    ++    + EM+E  V P+ 
Sbjct: 166 CRKMNKDERFEL-------KYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNI 225

Query: 194 ITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSY 239
            TYN ++  +C +G+V  +   + ++   G+ PD F++ +LI  Y
Sbjct: 226 YTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGY 263

HSP 10 Score: 51.6 bits (122), Expect = 2.1e-05
Identity = 64/298 (21.48%), Postives = 116/298 (38.93%), Query Frame = 1


Query: 4   EAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKET------CRYLINRGVKPGFSTYL 63
           +A   ++K+ + G  PD   +S   + +    DL +T       + + + G +P   T+L
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYS---SLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFL 714

Query: 64  TLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYK 123
           +LI+ L +   M+ G Q        G    + + + +++        D   E+   +   
Sbjct: 715 SLIKHLLE---MKYGKQ-------KGSEPELCAMSNMME-------FDTVVELLEKMVEH 774

Query: 124 GISPNVVTYNTLISGYCRNGNMEKAQELLE-MLLDCRFKPDIFTFNSLIDGLCQAHKHED 183
            ++PN  +Y  LI G C  GN+  A+++ + M  +    P    FN+L+   C+  KH +
Sbjct: 775 SVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNE 834

Query: 184 AFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQ 243
           A     +M+     P   +  +LI      G+  R T + + +   G   D  ++  +I 
Sbjct: 835 AAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIID 894

Query: 244 SYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYTCILV 295
                 G  K G+    Y                   E+F  M+ NGC   S T  L+
Sbjct: 895 ------GVGKQGLVEAFY-------------------ELFNVMEKNGCKFSSQTYSLL 907

[Close]

BLAST of ClCG05G006410 vs. TrEMBL
Match: A0A0A0L5W1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G165700 PE=4 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 4.6e-137
Identity = 245/311 (78.78%), Postives = 267/311 (85.85%), Query Frame = 1


Query: 1   MASEAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYLIN---RGVKPGFSTYL 60
           MASEAVMFL K GK+GYVP SS F++TLACVLKKLDLK TC    N    GVKPGFSTYL
Sbjct: 384 MASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYL 443

Query: 61  TLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYK 120
           TLIEALYK GKMEIGN+Y+DR+INDGLIS++YSYNMVIDCLCKGK MDRASE+FRDLH +
Sbjct: 444 TLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNR 503

Query: 121 GISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDA 180
           GISPN+VTYNTLI G+CRNGNM+KAQELLEMLL+ RF+PDIFTFNSLIDGLCQAHKHE+A
Sbjct: 504 GISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENA 563

Query: 181 FGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQS 240
           FGCFTEMVEWDV P+ ITYNILI SFC IGDVSRSTHLLR+MKLHGIQPDTFSFNALIQ 
Sbjct: 564 FGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQG 623

Query: 241 YFRMTGFRK----------LGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPD 299
           Y     F+K          LGIQPDNYTY ALIKS CK GRHD+ARE+FLSMK NGCTPD
Sbjct: 624 YTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPD 683

[Close]

BLAST of ClCG05G006410 vs. TrEMBL
Match: A0A0A0L5W1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G165700 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.9e-05
Identity = 56/253 (22.13%), Postives = 104/253 (41.11%), Query Frame = 1


Query: 109 EIFRDLHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGL 168
           E+F  +   G++P    YN ++    ++ +++ A    + +      PD FT+N LI G+
Sbjct: 215 EVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGV 274

Query: 169 CQAHKHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDT 228
           C+    ++A     +M      P+  TY ILI  F        +  +L+ MK   + P+ 
Sbjct: 275 CRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNE 334

Query: 229 FSFNALIQSYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMK--VNGCTP 288
            +  +L+   FR        I PD   +  L++              F+  K  +     
Sbjct: 335 ATMRSLVHGVFRC-------IAPDK-AFELLLE--------------FVERKQGITQLVC 394

Query: 289 DSYTCILVNDTLISAVVLEFLLQWEKQKVPYNGT------TVLHELAVSGSCEDAVLVNR 348
           D+    L N+++ S  V+  +   ++  VP + T       VL +L +  +C   V  N 
Sbjct: 395 DNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDLKVTC--TVFDNC 443

Query: 349 VEAGNNQGNETLM 354
           V++G   G  T +
Sbjct: 455 VQSGVKPGFSTYL 443

HSP 2 Score: 53.1 bits (126), Expect = 8.0e-04
Identity = 57/308 (18.51%), Postives = 122/308 (39.61%), Query Frame = 1


Query: 1   MASEAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYLIN---RGVKPGFSTYL 60
           +  EA+  + ++   GY P+   +++ +          ET + L     R V P  +T  
Sbjct: 279 VVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMR 338

Query: 61  TLIEALYKT----GKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRD 120
           +L+  +++        E+  ++++R    G+   V   + ++ CL    +   A      
Sbjct: 339 SLVHGVFRCIAPDKAFELLLEFVER--KQGITQLVC--DNILYCLSNNSMASEAVMFLIK 398

Query: 121 LHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHK 180
              +G  P+  T+N  ++   +  +++    + +  +    KP   T+ +LI+ L +A K
Sbjct: 399 TGKEGYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGK 458

Query: 181 HEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNA 240
            E        ++   +  +  +YN++I   C    + R++ + R++              
Sbjct: 459 MEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDL-------------- 518

Query: 241 LIQSYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYTCIL 300
                         GI P+  TY  LI   C+ G  D+A+E+   +  +   PD +T   
Sbjct: 519 -----------HNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNS 557

Query: 301 VNDTLISA 302
           + D L  A
Sbjct: 579 LIDGLCQA 557

HSP 3 Score: 365.9 bits (938), Expect = 5.5e-98
Identity = 174/318 (54.72%), Postives = 232/318 (72.96%), Query Frame = 1


Query: 1   MASEAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYL---INRGVKPGFSTYL 60
           M  EA +FL K  +K Y PDSS F++ + C++++LD+ ETC  L   + +G+KP F+TY+
Sbjct: 374 MPKEAALFLRKAQEKSYFPDSSTFNIIITCLIRELDVNETCEILDSFVEQGLKPCFNTYI 433

Query: 61  TLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYK 120
           +LIEAL+K G+   GN+Y++ ++  GL+S+ +SYNMVIDC CK  +MDRASE FR++   
Sbjct: 434 SLIEALFKAGRDGEGNRYLNEMVQVGLVSNAFSYNMVIDCFCKAGMMDRASETFREMKES 493

Query: 121 GISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDA 180
           GI PN+VT+NTLI+GY +NG + KA+ LLEMLL+  FKP+IFTF+S+IDGLC+AH+  DA
Sbjct: 494 GIDPNIVTFNTLINGYSKNGEIGKARALLEMLLEYGFKPNIFTFSSMIDGLCRAHQISDA 553

Query: 181 FGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQS 240
           F CF EMVEW V P+ +TYNILIRS CV+GDV++S  LLR M+ +GI PD FSFNALIQS
Sbjct: 554 FNCFNEMVEWGVAPNVVTYNILIRSLCVVGDVAKSMKLLRRMQANGISPDVFSFNALIQS 613

Query: 241 YFRMTGFRK----------LGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPD 300
           + RM    K          LG+ PDN+TY A IK+ C+ GR DEA+E+FLS++ NGC PD
Sbjct: 614 FCRMNKVEKAQNLFVSMLALGLSPDNFTYCAFIKALCESGRFDEAKELFLSVEANGCIPD 673

Query: 301 SYTCILVNDTLISAVVLE 306
           SYTC L+ D LI     E
Sbjct: 674 SYTCNLIIDALIQQARFE 691

[Close]

BLAST of ClCG05G006410 vs. TrEMBL
Match: F6H743_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01320 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.8e-17
Identity = 62/254 (24.41%), Postives = 119/254 (46.85%), Query Frame = 1


Query: 47  RGVKPGFSTYLTLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDR 106
           R V P  +T+ +L+  L+++       + + R +    +      + ++ CL   K+   
Sbjct: 318 RNVSPSDATFRSLVHGLFRSIDPSKAFELLSRFLEKEAVLPKVVCDTILCCLSNSKMPKE 377

Query: 107 ASEIFRDLHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLID 166
           A+   R    K   P+  T+N +I+   R  ++ +  E+L+  ++   KP   T+ SLI+
Sbjct: 378 AALFLRKAQEKSYFPDSSTFNIIITCLIRELDVNETCEILDSFVEQGLKPCFNTYISLIE 437

Query: 167 GLCQAHKHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQP 226
            L +A +  +      EMV+  +  +A +YN++I  FC  G + R++   REMK  GI P
Sbjct: 438 ALFKAGRDGEGNRYLNEMVQVGLVSNAFSYNMVIDCFCKAGMMDRASETFREMKESGIDP 497

Query: 227 DTFSFNALIQSYFR----------MTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMF 286
           +  +FN LI  Y +          +    + G +P+ +T++++I   C+  +  +A   F
Sbjct: 498 NIVTFNTLINGYSKNGEIGKARALLEMLLEYGFKPNIFTFSSMIDGLCRAHQISDAFNCF 557

Query: 287 LSMKVNGCTPDSYT 291
             M   G  P+  T
Sbjct: 558 NEMVEWGVAPNVVT 571

HSP 2 Score: 87.8 bits (216), Expect = 2.9e-14
Identity = 66/272 (24.26%), Postives = 121/272 (44.49%), Query Frame = 1


Query: 48  GVKPGFSTYLTLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRA 107
           G+ P    Y  +I+AL K+  +++      ++  D      ++YN++I  +C+  ++D A
Sbjct: 214 GLSPSTRLYNAVIDALVKSNSLDLAYLKFQQMSLDNCNPDRFTYNILIHGVCRIGVVDEA 273

Query: 108 SEIFRDLHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDG 167
             + + +     SPNV TY  LI G+C     ++A  +LE +      P   TF SL+ G
Sbjct: 274 LRLVKQMESLDCSPNVFTYTILIDGFCNARRFDEAFRVLETMKGRNVSPSDATFRSLVHG 333

Query: 168 LCQAHKHEDAFGCFTEMVEWD-VTPDAITYNILIRSFCVIGD---VSRSTHLLREMKLHG 227
           L ++     AF   +  +E + V P  +   IL    C + +      +   LR+ +   
Sbjct: 334 LFRSIDPSKAFELLSRFLEKEAVLPKVVCDTIL----CCLSNSKMPKEAALFLRKAQEKS 393

Query: 228 IQPDTFSFNALIQSYFR----------MTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAR 287
             PD+ +FN +I    R          +  F + G++P   TY +LI++  K GR  E  
Sbjct: 394 YFPDSSTFNIIITCLIRELDVNETCEILDSFVEQGLKPCFNTYISLIEALFKAGRDGEGN 453

Query: 288 EMFLSMKVNGCTPDSYTCILVNDTLISAVVLE 306
                M   G   ++++  +V D    A +++
Sbjct: 454 RYLNEMVQVGLVSNAFSYNMVIDCFCKAGMMD 481

HSP 3 Score: 75.5 bits (184), Expect = 1.5e-10
Identity = 74/297 (24.92%), Postives = 123/297 (41.41%), Query Frame = 1


Query: 54  STYLTLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRD 113
           S  + L   L + G + +  + +  I N G   +     ++I    +  L    +E+F  
Sbjct: 150 SVRVALANVLNRKGPVILSVELLQDIRNSGCAITEDLLCILIGSWGRFGLAKYCAEVFGQ 209

Query: 114 LHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHK 173
           + + G+SP+   YN +I    ++ +++ A    + +      PD FT+N LI G+C+   
Sbjct: 210 VSFLGLSPSTRLYNAVIDALVKSNSLDLAYLKFQQMSLDNCNPDRFTYNILIHGVCRIGV 269

Query: 174 HEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNA 233
            ++A     +M   D +P+  TY ILI  FC       +  +L  MK   + P   +F +
Sbjct: 270 VDEALRLVKQMESLDCSPNVFTYTILIDGFCNARRFDEAFRVLETMKGRNVSPSDATFRS 329

Query: 234 LIQSYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYTCIL 293
           L+   FR        I P         K+   L R  E +E  L   V  C  D+  C L
Sbjct: 330 LVHGLFR-------SIDPS--------KAFELLSRFLE-KEAVLPKVV--C--DTILCCL 389

Query: 294 VNDTLISAVVLEFLLQWEKQKVPYNG------TTVLHELAVSGSCEDAVLVNRVEAG 345
            N  +     L      EK   P +       T ++ EL V+ +CE  +L + VE G
Sbjct: 390 SNSKMPKEAALFLRKAQEKSYFPDSSTFNIIITCLIRELDVNETCE--ILDSFVEQG 424

HSP 4 Score: 364.8 bits (935), Expect = 1.2e-97
Identity = 178/316 (56.33%), Postives = 236/316 (74.68%), Query Frame = 1


Query: 1   MASEAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYL---INRGVKPGFSTYL 60
           ++ EA MFL K   +GY PDSS FS  + C++K LDLKETC  L   +NR +K GF+ YL
Sbjct: 368 LSVEAAMFLKKSESRGYCPDSSTFSTVVTCLIKGLDLKETCDILDRFVNRNIKLGFNAYL 427

Query: 61  TLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYK 120
            L+EALYK GK+E+GN+Y+++++  G +++VYSYNM+IDC CK  +MD+ S  FRD+  K
Sbjct: 428 ALLEALYKGGKVELGNRYLNQMLEYGFVANVYSYNMLIDCFCKTNMMDKGSRYFRDMSEK 487

Query: 121 GISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDA 180
           G++PN+VT+NTLISG+C+ G++ KA+ELL+MLL    KPD FTFNS+IDGLCQ ++ EDA
Sbjct: 488 GVAPNLVTFNTLISGHCKAGDVSKARELLKMLLQQGLKPDAFTFNSVIDGLCQTYQTEDA 547

Query: 181 FGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQS 240
           F CF+EMVEW VTP++ITYNILIRSFCV GDVS+S  LLR+M+  GI+PD FSFNALIQS
Sbjct: 548 FDCFSEMVEWGVTPNSITYNILIRSFCVKGDVSKSMTLLRKMQADGIKPDIFSFNALIQS 607

Query: 241 YFRMTGFRK----------LGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPD 300
           + RM   +K          L + PDN+TY A IK+ C+  R DEA+ +FLSM+ N C+PD
Sbjct: 608 FCRMNKLQKAQKLLISMLTLDLCPDNFTYCAFIKALCRSNRFDEAKALFLSMEENKCSPD 667

Query: 301 SYTCILVNDTLISAVV 304
           S+TC    DT ISA++
Sbjct: 668 SFTC----DTYISALI 679

[Close]

BLAST of ClCG05G006410 vs. TrEMBL
Match: A0A161ZJR7_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_023334 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 4.2e-13
Identity = 47/142 (33.10%), Postives = 75/142 (52.82%), Query Frame = 1


Query: 59  LIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKG 118
           LI +  + G  +   Q  +++   G+  S   YN VID L K   +D A   F+ +    
Sbjct: 184 LIGSWGRLGLAKYCGQVFEQVSYLGICLSTRLYNAVIDALVKSNSLDLAYLKFQQMQVDN 243

Query: 119 ISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAF 178
             P+  TYN LI G C+ G +++A  L++ +    + P++FT+  LIDG C A K ++AF
Sbjct: 244 CRPDRFTYNILIHGVCKAGVVDEAIRLVKQMEGSGYSPNVFTYTILIDGYCNAKKIDEAF 303

Query: 179 GCFTEMVEWDVTPDAITYNILI 201
           G   +M + +V P+  TY  LI
Sbjct: 304 GILDKMKKRNVKPNDATYRSLI 325

HSP 2 Score: 351.7 bits (901), Expect = 1.1e-93
Identity = 172/318 (54.09%), Postives = 228/318 (71.70%), Query Frame = 1


Query: 1   MASEAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYL---INRGVKPGFSTYL 60
           MA EA +F+ K+  +GY+PD+S F++T+AC++K LDL ETC  L   +  GVK GF+TYL
Sbjct: 340 MAREAALFMKKLAGRGYLPDNSTFNLTMACLIKGLDLDETCLILDSFVELGVKLGFNTYL 399

Query: 61  TLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYK 120
            LI+ALY  GK   G+QY+D++  DGL+++V+SYNMVID  CK  +MDRA + FR+++ +
Sbjct: 400 ALIQALYNIGKFVEGDQYLDQMAKDGLLANVFSYNMVIDSFCKASMMDRARKTFREMYLR 459

Query: 121 GISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDA 180
           GI+P +VT+NT+ISG+C+ G + KA+E L MLL+  F PDIFTF+SLIDGLC+AH  +DA
Sbjct: 460 GIAPTLVTFNTIISGHCKIGEVHKAKEFLVMLLESGFDPDIFTFSSLIDGLCRAHMIDDA 519

Query: 181 FGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQS 240
           F CF+EM +WDVTP+ +TYNILIRS C IGDV+R+  LLR+M+  GI  D FSFNALIQS
Sbjct: 520 FDCFSEMFQWDVTPNDVTYNILIRSLCAIGDVARAMKLLRKMQATGINADIFSFNALIQS 579

Query: 241 YFRMTGFRK----------LGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPD 300
           + RM    K          LG+ PDNYTY A IK+ C+  R DE   M  SM+  GC PD
Sbjct: 580 FCRMKKIEKAEKLFNSMLRLGLDPDNYTYGAFIKALCESERFDEVIRMLKSMEAKGCIPD 639

Query: 301 SYTCILVNDTLISAVVLE 306
           SYTC LV ++L+    LE
Sbjct: 640 SYTCNLVLESLVQKGCLE 657

[Close]

BLAST of ClCG05G006410 vs. TrEMBL
Match: A0A061EQQ8_THECC (Pentatricopeptide (PPR) domain protein 40, putative OS=Theobroma cacao GN=TCM_021322 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 2.4e-77
Identity = 162/366 (44.26%), Postives = 227/366 (62.02%), Query Frame = 1


Query: 1   MASEAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYL---INRGVKPGFSTYL 60
           MA EA +F+ K+  +GY+PD+S F++T+AC++K LDL ETC  L   +  GVK GF+TYL
Sbjct: 340 MAREAALFMKKLAGRGYLPDNSTFNLTMACLIKGLDLDETCLILDSFVELGVKLGFNTYL 399

Query: 61  TLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYK 120
            LI+ALY  GK   G+QY+D++  DGL+++V+SYNMVID  CK  +MDRA + FR+++ +
Sbjct: 400 ALIQALYNIGKFVEGDQYLDQMAKDGLLANVFSYNMVIDSFCKASMMDRARKTFREMYLR 459

Query: 121 GISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDA 180
           GI+P +VT+NT+ISG+C+ G + KA+E L MLL+  F PDIFTF+SLIDGLC+AH  +DA
Sbjct: 460 GIAPTLVTFNTIISGHCKIGEVHKAKEFLVMLLESGFDPDIFTFSSLIDGLCRAHMIDDA 519

Query: 181 FGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQS 240
           F CF+EM +WDVTP+ +TYNILIRS C IGDV+R+  LLR+M+  GI  D FSFNAL   
Sbjct: 520 FDCFSEMFQWDVTPNDVTYNILIRSLCAIGDVARAMKLLRKMQATGINADIFSFNAL--- 579

Query: 241 YFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYTC-----I 300
                                 I+S C++ + ++A ++F SM   G  PD+YT       
Sbjct: 580 ----------------------IQSFCRMKKIEKAEKLFNSMLRLGLDPDNYTYGAFIKA 639

Query: 301 LVNDTLISAVVLEFLLQWEKQKVP--YNGTTVLHELAVSGSCEDAVLVNRVEAGNNQGNE 357
           L        V+        K  +P  Y    VL  L   G  E+A  +   +  N +G +
Sbjct: 640 LCESERFDEVIRMLKSMEAKGCIPDSYTCNLVLESLVQKGCLEEARDI--AKRCNRRGTK 678

HSP 2 Score: 88.6 bits (218), Expect = 1.7e-14
Identity = 82/363 (22.59%), Postives = 156/363 (42.98%), Query Frame = 1


Query: 28  LACVL----KKLDLKETCRYLINR----GVKPGFSTYLTLIEALYKTGKMEIGNQYIDRI 87
           L C+L     +L L + C  +  +    G+ P    Y  +I+AL K+  +++      ++
Sbjct: 152 LLCILIGSWGRLGLAKYCAEIFGQISFLGISPSTRLYNAVIDALIKSNSLDLAYLKFQQM 211

Query: 88  INDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGISPNVVTYNTLISGYCRNGNM 147
             D      ++YN++I  +C+  ++D A  + + +   G SPNV TY  LI G+C    +
Sbjct: 212 SADNCKPDRFTYNILIHGVCRTGVVDEALRLVKQMEGLGYSPNVYTYTILIDGFCNARRV 271

Query: 148 EKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFTEMVEWDVTPDAITYNIL 207
           ++A  L+EM+      P+  T  SLI G+ +     +AF      +E +     +  + L
Sbjct: 272 DEAFRLVEMMKKRNVIPNEATVRSLIHGVFRCVAPHEAFELLIMFLEKEPMMQKLACDTL 331

Query: 208 IRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNA----------LIQSYFRMTGFRKLGI 267
           +           +   ++++   G  PD  +FN           L ++   +  F +LG+
Sbjct: 332 LYCLSNNSMAREAALFMKKLAGRGYLPDNSTFNLTMACLIKGLDLDETCLILDSFVELGV 391

Query: 268 QPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYTCILVNDTLISAVVLE---- 327
           +    TY ALI++   +G+  E  +    M  +G   + ++  +V D+   A +++    
Sbjct: 392 KLGFNTYLALIQALYNIGKFVEGDQYLDQMAKDGLLANVFSYNMVIDSFCKASMMDRARK 451

Query: 328 -FLLQWEKQKVPYNGTTVLHELAVSGSCE-------DAVLVNRVEAGNNQGNETL--MID 359
            F   + +   P   T V     +SG C+          LV  +E+G +    T   +ID
Sbjct: 452 TFREMYLRGIAP---TLVTFNTIISGHCKIGEVHKAKEFLVMLLESGFDPDIFTFSSLID 511

HSP 3 Score: 82.4 bits (202), Expect = 1.2e-12
Identity = 70/258 (27.13%), Postives = 112/258 (43.41%), Query Frame = 1


Query: 59  LIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKG 118
           L  ALY+ G + +  + +  I N GL+ +     ++I    +  L    +EIF  + + G
Sbjct: 121 LATALYRKGPVLLSVELVKDIRNSGLVVTEDLLCILIGSWGRLGLAKYCAEIFGQISFLG 180

Query: 119 ISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAF 178
           ISP+   YN +I    ++ +++ A    + +     KPD FT+N LI G+C+    ++A 
Sbjct: 181 ISPSTRLYNAVIDALIKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRTGVVDEAL 240

Query: 179 GCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSY 238
               +M     +P+  TY ILI  FC    V  +  L+  MK   + P+  +  +LI   
Sbjct: 241 RLVKQMEGLGYSPNVYTYTILIDGFCNARRVDEAFRLVEMMKKRNVIPNEATVRSLIHGV 300

Query: 239 FRMTGFRK--------LGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKV---NGCTPD 298
           FR     +        L  +P     A      C L  +  ARE  L MK     G  PD
Sbjct: 301 FRCVAPHEAFELLIMFLEKEPMMQKLACDTLLYC-LSNNSMAREAALFMKKLAGRGYLPD 360

Query: 299 SYTCILVNDTLISAVVLE 306
           + T  L    LI  + L+
Sbjct: 361 NSTFNLTMACLIKGLDLD 377

HSP 4 Score: 349.0 bits (894), Expect = 7.0e-93
Identity = 173/312 (55.45%), Postives = 226/312 (72.44%), Query Frame = 1


Query: 1   MASEAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYL---INRGVKPGFSTYL 60
           MASEA   L K+G +GY+P+SS F  T+ C++  LDL ETC  L   I RGVKP FSTYL
Sbjct: 213 MASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYL 272

Query: 61  TLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYK 120
            L+EALYK G    G++Y++ +  DGL+S+V SYNMVIDC CK  +MDRA+EI R++  +
Sbjct: 273 LLMEALYKAGGDVEGDRYLNHVFKDGLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDR 332

Query: 121 GISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDA 180
            I+PN+VT+NTLISG+C++  + K +ELL MLL+C FKPD FTFNS+ID LC+AH+ EDA
Sbjct: 333 DIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDA 392

Query: 181 FGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQS 240
             C +EMVEW V P+ ITYNILIRS C IGDV+RS  L ++M+   I PD ++FNALIQS
Sbjct: 393 LDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQS 452

Query: 241 YFRMTGFRK----------LGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPD 300
           + RM    K          LG++PDN++Y+ALIK+  K GR DEA++ FLSM+ NGC PD
Sbjct: 453 FCRMNKIEKAEKAFFSMLSLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPD 512

[Close]

BLAST of ClCG05G006410 vs. TAIR10
Match: AT3G16890.1 (AT3G16890.1 pentatricopeptide (PPR) domain protein 40)

HSP 1 Score: 299.7 bits (766), Expect = 2.5e-81
Identity = 148/309 (47.90%), Postives = 209/309 (67.64%), Query Frame = 1


Query: 1   MASEAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYL---INRGVKPGFSTYL 60
           MA E   FL KIG++GY+PDSS F+  ++C+LK  DL ETCR     ++RGVKPGF+ YL
Sbjct: 335 MAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYL 394

Query: 61  TLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYK 120
            L++AL    +   G++Y+ ++  DGL+SSVYSYN VIDCLCK + ++ A+    ++  +
Sbjct: 395 VLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDR 454

Query: 121 GISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDA 180
           GISPN+VT+NT +SGY   G+++K   +LE LL   FKPD+ TF+ +I+ LC+A + +DA
Sbjct: 455 GISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDA 514

Query: 181 FGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQS 240
           F CF EM+EW + P+ ITYNILIRS C  GD  RS  L  +MK +G+ PD +++NA IQS
Sbjct: 515 FDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQS 574

Query: 241 YFRMTGFRK----------LGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPD 297
           + +M   +K          +G++PDN+TY+ LIK+  + GR  EAREMF S++ +GC PD
Sbjct: 575 FCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPD 634

HSP 2 Score: 94.4 bits (233), Expect = 1.6e-19
Identity = 76/316 (24.05%), Postives = 137/316 (43.35%), Query Frame = 1


Query: 28  LACVL----KKLDLKETCRYLINR----GVKPGFSTYLTLIEALYKTGKMEIGNQYIDRI 87
           L CVL     +L L + C  +  +    G+KP    Y  +I+AL K+  +++      ++
Sbjct: 147 LMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQM 206

Query: 88  INDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGISPNVVTYNTLISGYCRNGNM 147
            +DG     ++YN++I  +CK  ++D A  + + +  +G  PNV TY  LI G+   G +
Sbjct: 207 RSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRV 266

Query: 148 EKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFTEMVEWDVTPDAITYNIL 207
           ++A + LEM+   +  P+  T  + + G+ +      AF      +E D     + Y+ +
Sbjct: 267 DEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAV 326

Query: 208 IRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNA----------LIQSYFRMTGFRKLGI 267
           +           +   LR++   G  PD+ +FNA          L+++     GF   G+
Sbjct: 327 LYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGV 386

Query: 268 QPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYTCILVNDTLISAVVLE---- 322
           +P    Y  L+++     R  E       M V+G     Y+   V D L  A  +E    
Sbjct: 387 KPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAM 446

HSP 3 Score: 71.2 bits (173), Expect = 1.4e-12
Identity = 54/254 (21.26%), Postives = 101/254 (39.76%), Query Frame = 1


Query: 62  ALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGISP 121
           AL++ G + +  + +  I + G   S     ++I    +  L    +++F  + + G+ P
Sbjct: 119 ALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKP 178

Query: 122 NVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCF 181
           +   YN +I    ++ +++ A    + +     KPD FT+N LI G+C+    ++A    
Sbjct: 179 STRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLV 238

Query: 182 TEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSYFR- 241
            +M +    P+  TY ILI  F + G V  +   L  M++  + P+  +    +   FR 
Sbjct: 239 KQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRC 298

Query: 242 ---------MTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYT- 300
                    + GF +         Y A++          E  +    +   G  PDS T 
Sbjct: 299 LPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTF 358

HSP 4 Score: 65.5 bits (158), Expect = 7.8e-11
Identity = 53/190 (27.89%), Postives = 84/190 (44.21%), Query Frame = 1


Query: 17  YVPDSSIFSVTLACVLKKLDL---KETCRYLINRGVKPGFSTYLTLIEALYKTGKMEIGN 76
           Y  D S+ SV    + +K  L    E  + + + G +        LI +  + G  +  N
Sbjct: 106 YAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCN 165

Query: 77  QYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGISPNVVTYNTLISGY 136
               +I   G+  S   YN VID L K   +D A   F+ +   G  P+  TYN LI G 
Sbjct: 166 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV 225

Query: 137 CRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFTEMVEWDVTPDA 196
           C+ G +++A  L++ +     +P++FT+  LIDG   A + ++A      M    + P+ 
Sbjct: 226 CKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNE 285

Query: 197 ITYNILIRSF 204
            T    IR+F
Sbjct: 286 AT----IRTF 291

[Close]

BLAST of ClCG05G006410 vs. TAIR10
Match: AT4G11690.1 (AT4G11690.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 159.5 bits (402), Expect = 4.0e-39
Identity = 93/331 (28.10%), Postives = 165/331 (49.85%), Query Frame = 1


Query: 9   LSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYLINRG---VKPGFSTYLTLIEALYK 68
           L ++ + G+ P+  I++  +    KK ++++        G   +     TY  LI  L+K
Sbjct: 186 LIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245

Query: 69  TGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGISPNVVT 128
            G  + G +  +++  DG+  ++Y+YN V++ LCK      A ++F ++  +G+S N+VT
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVT 305

Query: 129 YNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFTEMV 188
           YNTLI G CR   + +A ++++ +      P++ T+N+LIDG C   K   A     ++ 
Sbjct: 306 YNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLK 365

Query: 189 EWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSYFRMTGFR 248
              ++P  +TYNIL+  FC  GD S +  +++EM+  GI+P   ++  LI ++ R     
Sbjct: 366 SRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNME 425

Query: 249 K----------LGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYTCILVN 308
           K          LG+ PD +TY+ LI   C  G+ +EA  +F SM    C P        N
Sbjct: 426 KAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEP--------N 485

Query: 309 DTLISAVVLEFLLQWEKQKVPYNGTTVLHEL 327
           + + + ++L +     K+   Y    +L E+
Sbjct: 486 EVIYNTMILGYC----KEGSSYRALKLLKEM 504

HSP 2 Score: 129.4 bits (324), Expect = 4.4e-30
Identity = 87/323 (26.93%), Postives = 157/323 (48.61%), Query Frame = 1


Query: 7   MFLSKIGKKGY-----VPDSSIFS--VTLACVLKKL-------DLKETCRYLINRGVKPG 66
           +F + + K+G+     + +  +F    T  CV+ +L       D  +    +  RGV   
Sbjct: 243 LFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCN 302

Query: 67  FSTYLTLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFR 126
             TY TLI  L +  K+   N+ +D++ +DG+  ++ +YN +ID  C    + +A  + R
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362

Query: 127 DLHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAH 186
           DL  +G+SP++VTYN L+SG+CR G+   A ++++ + +   KP   T+  LID   ++ 
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422

Query: 187 KHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFN 246
             E A      M E  + PD  TY++LI  FC+ G ++ ++ L + M     +P+   +N
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482

Query: 247 ALIQSYFRM-TGFRKL---------GIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVN 302
            +I  Y +  + +R L          + P+  +Y  +I+  CK  +  EA  +   M  +
Sbjct: 483 TMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS 542

HSP 3 Score: 102.4 bits (254), Expect = 5.8e-22
Identity = 64/246 (26.02%), Postives = 120/246 (48.78%), Query Frame = 1


Query: 5   AVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYLINRGVKPGFSTYL--TLIEA 64
           ++ + +++   G+VP S+ F+  L  V+      +   +      K     Y    LI+ 
Sbjct: 113 SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKG 172

Query: 65  LYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGISPN 124
             + G++E     +  +   G   +V  Y  +ID  CK   +++A ++F ++   G+  N
Sbjct: 173 CCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVAN 232

Query: 125 VVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFT 184
             TY  LI+G  +NG  ++  E+ E + +    P+++T+N +++ LC+  + +DAF  F 
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292

Query: 185 EMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSYFRMT 244
           EM E  V+ + +TYN LI   C    ++ +  ++ +MK  GI P+  ++N LI  +    
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF---C 352

Query: 245 GFRKLG 249
           G  KLG
Sbjct: 353 GVGKLG 355

HSP 4 Score: 58.2 bits (139), Expect = 1.3e-08
Identity = 44/205 (21.46%), Postives = 84/205 (40.98%), Query Frame = 1


Query: 91  YNMVIDCLCKGKLMDRASEIFRDLHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLL 150
           Y ++I+   + + ++ +   F ++   G  P    +N L++    + +  +         
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156

Query: 151 DCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVS 210
             +   D+++F  LI G C+A + E +F    E+ E+  +P+ + Y  LI   C  G++ 
Sbjct: 157 S-KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 216

Query: 211 RSTHLLREMKLHGIQPDTFSFNALIQSYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHD 270
           ++  L  EM                          KLG+  +  TY  LI    K G   
Sbjct: 217 KAKDLFFEM-------------------------GKLGLVANERTYTVLINGLFKNGVKK 275

Query: 271 EAREMFLSMKVNGCTPDSYT--CIL 294
           +  EM+  M+ +G  P+ YT  C++
Sbjct: 277 QGFEMYEKMQEDGVFPNLYTYNCVM 275

HSP 5 Score: 50.8 bits (120), Expect = 2.0e-06
Identity = 52/236 (22.03%), Postives = 89/236 (37.71%), Query Frame = 1


Query: 114 LHYKGISPNVVT----YNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLC 173
           LHY   S    T    Y  +I+ Y ++ ++  +      ++D  F P    FN L+  + 
Sbjct: 81  LHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVV 140

Query: 174 QAHKHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTF 233
            +      +  F E     V  D  ++ ILI+  C  G++ +S  LL E+          
Sbjct: 141 GSSSFNQWWSFFNENKS-KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELT--------- 200

Query: 234 SFNALIQSYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSY 293
                           + G  P+   Y  LI   CK G  ++A+++F  M   G   +  
Sbjct: 201 ----------------EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANER 260

Query: 294 T-CILVNDTLISAVVLEFLLQWEKQKVP------YNGTTVLHELAVSGSCEDAVLV 339
           T  +L+N    + V  +    +EK +        Y    V+++L   G  +DA  V
Sbjct: 261 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQV 290

[Close]

BLAST of ClCG05G006410 vs. TAIR10
Match: AT1G74580.1 (AT1G74580.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 156.0 bits (393), Expect = 4.4e-38
Identity = 102/349 (29.23%), Postives = 164/349 (46.99%), Query Frame = 1


Query: 4   EAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRY---LINRGVKPGFSTYLTLI 63
           E    L K+ K+G +P+   +++ +  + ++ +L    R    LI +G KP   TY  LI
Sbjct: 234 ECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLI 293

Query: 64  EALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGIS 123
             L K  K +    Y+ +++N+GL    Y+YN +I   CKG ++  A  I  D  + G  
Sbjct: 294 YGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFV 353

Query: 124 PNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGC 183
           P+  TY +LI G C  G   +A  L    L    KP++  +N+LI GL       +A   
Sbjct: 354 PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQL 413

Query: 184 FTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSY-- 243
             EM E  + P+  T+NIL+   C +G VS +  L++ M   G  PD F+FN LI  Y  
Sbjct: 414 ANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473

Query: 244 -FRMTGFRKL-------GIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYT 303
             +M    ++       G+ PD YTY +L+   CK  + ++  E + +M   GC P+ +T
Sbjct: 474 QLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFT 533

Query: 304 CILVNDTLISAVVLEFLLQW--EKQKVPYNGTTVLHELAVSGSCEDAVL 338
             ++ ++L     L+  L    E +    N   V     + G C++  L
Sbjct: 534 FNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL 582

HSP 2 Score: 127.5 bits (319), Expect = 1.7e-29
Identity = 81/307 (26.38%), Postives = 144/307 (46.91%), Query Frame = 1


Query: 15  KGYVPDSSIFSVTLACVLKK---LDLKETCRYLINRGVKPGFSTYLTLIEALYKTGKMEI 74
           KG  P+  +++  +  +  +   L+  +    +  +G+ P   T+  L+  L K G +  
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444

Query: 75  GNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGISPNVVTYNTLIS 134
            +  +  +I+ G    ++++N++I        M+ A EI   +   G+ P+V TYN+L++
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN 504

Query: 135 GYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFTEMVEWDVTP 194
           G C+    E   E  + +++    P++FTFN L++ LC+  K ++A G   EM    V P
Sbjct: 505 GLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564

Query: 195 DAITYNILIRSFCVIGDVSRSTHLLREM-KLHGIQPDTFSFNALIQSY---FRMTGFRKL 254
           DA+T+  LI  FC  GD+  +  L R+M + + +   T ++N +I ++     +T   KL
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKL 624

Query: 255 -------GIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYT------CILV 302
                   + PD YTY  ++   CK G  +   +  L M  NG  P   T      C+ V
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCV 684

HSP 3 Score: 115.9 bits (289), Expect = 5.1e-26
Identity = 72/257 (28.02%), Postives = 123/257 (47.86%), Query Frame = 1


Query: 44  LINRGVKPGFSTYLTLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKL 103
           ++  GV    ST+  L+  L K G ++   + +D++I  G++ ++++YN+ I  LC+   
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266

Query: 104 MDRASEIFRDLHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNS 163
           +D A  +   L  +G  P+V+TYN LI G C+N   ++A+  L  +++   +PD +T+N+
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326

Query: 164 LIDGLCQAHKHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHG 223
           LI G C+    + A     + V     PD  TY  LI   C  G+ +R+  L  E    G
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG 386

Query: 224 IQPDTFSFNALIQSYFRM----------TGFRKLGIQPDNYTYAALIKSPCKLGRHDEAR 283
           I+P+   +N LI+                   + G+ P+  T+  L+   CK+G   +A 
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446

Query: 284 EMFLSMKVNGCTPDSYT 291
            +   M   G  PD +T
Sbjct: 447 GLVKVMISKGYFPDIFT 463

HSP 4 Score: 107.1 bits (266), Expect = 2.4e-23
Identity = 60/224 (26.79%), Postives = 109/224 (48.66%), Query Frame = 1


Query: 15  KGYVPDSSIFSVTLACVLKKLDLKETCRYLIN---RGVKPGFSTYLTLIEALYKTGKMEI 74
           +G  PD   F++ +    K        R L N   +G +     Y T++   Y+      
Sbjct: 140 RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAE 199

Query: 75  GNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGISPNVVTYNTLIS 134
           G +   +++  G+   + ++N ++  LCK   +    ++   +  +G+ PN+ TYN  I 
Sbjct: 200 GYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQ 259

Query: 135 GYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFTEMVEWDVTP 194
           G C+ G ++ A  ++  L++   KPD+ T+N+LI GLC+  K ++A     +MV   + P
Sbjct: 260 GLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEP 319

Query: 195 DAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALI 236
           D+ TYN LI  +C  G V  +  ++ +   +G  PD F++ +LI
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363

[Close]

BLAST of ClCG05G006410 vs. TAIR10
Match: AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 150.2 bits (378), Expect = 2.4e-36
Identity = 92/301 (30.56%), Postives = 147/301 (48.84%), Query Frame = 1


Query: 9   LSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYLIN---RGVKPGFSTYLTLIEALYK 68
           L  +  KG  P+   ++V +  + ++  +KE    L     RG      TY TLI+   K
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322

Query: 69  TGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGISPNVVT 128
            G           ++  GL  SV +Y  +I  +CK   M+RA E    +  +G+ PN  T
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382

Query: 129 YNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFTEMV 188
           Y TL+ G+ + G M +A  +L  + D  F P + T+N+LI+G C   K EDA     +M 
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442

Query: 189 EWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSYFRMTGFR 248
           E  ++PD ++Y+ ++  FC   DV  +  + REM   GI+PDT ++++LIQ +      +
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502

Query: 249 ----------KLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYT-CILV 296
                     ++G+ PD +TY ALI + C  G  ++A ++   M   G  PD  T  +L+
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562

HSP 2 Score: 131.0 bits (328), Expect = 1.5e-30
Identity = 86/324 (26.54%), Postives = 153/324 (47.22%), Query Frame = 1


Query: 5   AVMFLSKIGKKGYVPDSSIFSVTLA--CVLKKLDLK-ETCRYLINRGVKPGFSTYLTLIE 64
           A+    K+  KG +P+   ++  +   C L+K+D   +  R +  +G++P   +Y  +I 
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283

Query: 65  ALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGISP 124
            L + G+M+  +  +  +   G      +YN +I   CK     +A  +  ++   G++P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343

Query: 125 NVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCF 184
           +V+TY +LI   C+ GNM +A E L+ +      P+  T+ +L+DG  Q     +A+   
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403

Query: 185 TEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSYFRM 244
            EM +   +P  +TYN LI   CV G +  +  +L +MK  G+ PD  S++ ++  + R 
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463

Query: 245 TGFRKL----------GIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYTC 304
               +           GI+PD  TY++LI+  C+  R  EA +++  M   G  PD +T 
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523

Query: 305 ILVNDTLISAVVLEFLLQWEKQKV 316
             + +       LE  LQ   + V
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMV 547

HSP 3 Score: 119.8 bits (299), Expect = 3.5e-27
Identity = 91/361 (25.21%), Postives = 159/361 (44.04%), Query Frame = 1


Query: 16  GYVPDSSIFSVTL-ACVLKKLDL---KETCRYLINRGVKPGFSTYLTLIEALYKTGKMEI 75
           G++P    ++  L A +  K ++   +   + ++   V P   TY  LI      G +++
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223

Query: 76  GNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGISPNVVTYNTLIS 135
                D++   G + +V +YN +ID  CK + +D   ++ R +  KG+ PN+++YN +I+
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283

Query: 136 GYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFTEMVEWDVTP 195
           G CR G M++   +L  +    +  D  T+N+LI G C+      A     EM+   +TP
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343

Query: 196 DAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSYFRMTGFRKLGIQP 255
             ITY  LI S C  G+++R+   L +M++                          G+ P
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVR-------------------------GLCP 403

Query: 256 DNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYTC-ILVNDTLISAVVLEFLLQW 315
           +  TY  L+    + G  +EA  +   M  NG +P   T   L+N   ++  + + +   
Sbjct: 404 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 463

Query: 316 EKQKVP-YNGTTVLHELAVSGSC-----EDAVLVNR--VEAGNNQGNETL--MIDGGCDN 362
           E  K    +   V +   +SG C     ++A+ V R  VE G      T   +I G C+ 
Sbjct: 464 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 499

HSP 4 Score: 116.7 bits (291), Expect = 3.0e-26
Identity = 81/288 (28.12%), Postives = 130/288 (45.14%), Query Frame = 1


Query: 3   SEAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYLI---NRGVKPGFSTYLTL 62
           + A+ FL ++  +G  P+   ++  +    +K  + E  R L    + G  P   TY  L
Sbjct: 362 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421

Query: 63  IEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGI 122
           I     TGKME     ++ +   GL   V SY+ V+   C+   +D A  + R++  KGI
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481

Query: 123 SPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFG 182
            P+ +TY++LI G+C     ++A +L E +L     PD FT+ +LI+  C     E A  
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541

Query: 183 CFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSYF 242
              EMVE  V PD +TY++LI           +  LL ++      P   +++ LI++  
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601

Query: 243 RMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPD 288
            +          +  +  +LIK  C  G   EA ++F SM      PD
Sbjct: 602 NI----------EFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639

HSP 5 Score: 103.2 bits (256), Expect = 3.4e-22
Identity = 67/222 (30.18%), Postives = 103/222 (46.40%), Query Frame = 1


Query: 89  YSYNMVIDCLCKG----KLMDRASEIFRDLHYKGISPNVVTYNTLISGYCRNG-NMEKAQ 148
           YS + V D + K      L+D+A  I       G  P V++YN ++    R+  N+  A+
Sbjct: 131 YSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAE 190

Query: 149 ELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFTEMVEWDVTPDAITYNILIRSF 208
            + + +L+ +  P++FT+N LI G C A   + A   F +M      P+ +TYN LI  +
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250

Query: 209 CVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSY----------FRMTGFRKLGIQPDN 268
           C +  +     LLR M L G++P+  S+N +I             F +T   + G   D 
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310

Query: 269 YTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPD--SYTCIL 294
            TY  LIK  CK G   +A  M   M  +G TP   +YT ++
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLI 352

HSP 6 Score: 81.6 bits (200), Expect = 1.1e-15
Identity = 63/240 (26.25%), Postives = 106/240 (44.17%), Query Frame = 1


Query: 4   EAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETC---RYLINRGVKPGFSTYLTLI 63
           EA+    ++ +KG  PD+  +S  +    ++   KE C     ++  G+ P   TY  LI
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527

Query: 64  EALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGIS 123
            A    G +E   Q  + ++  G++  V +Y+++I+ L K      A  +   L Y+   
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587

Query: 124 PNVVTYN---------------TLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLI 183
           P+ VTY+               +LI G+C  G M +A ++ E +L    KPD   +N +I
Sbjct: 588 PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647

Query: 184 DGLCQAHKHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDV----SRSTHLLREMKL 222
            G C+A     A+  + EMV+       +T   L+++    G V    S   H+LR  +L
Sbjct: 648 HGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCEL 707

[Close]

BLAST of ClCG05G006410 vs. TAIR10
Match: AT5G65560.1 (AT5G65560.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 147.5 bits (371), Expect = 1.6e-35
Identity = 83/257 (32.30%), Postives = 133/257 (51.75%), Query Frame = 1


Query: 44  LINRGVKPGFSTYLTLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKL 103
           ++ R V P   TY +LI+   ++G  +   + +  + + GL+   ++Y  +ID LCK K 
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512

Query: 104 MDRASEIFRDLHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNS 163
           ++ A ++F  L  KG++PNVV Y  LI GYC+ G +++A  +LE +L     P+  TFN+
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572

Query: 164 LIDGLCQAHKHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHG 223
           LI GLC   K ++A     +MV+  + P   T  ILI      GD   +    ++M   G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632

Query: 224 IQPDTFSFNALIQSYFR----------MTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAR 283
            +PD  ++   IQ+Y R          M   R+ G+ PD +TY++LIK    LG+ + A 
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692

Query: 284 EMFLSMKVNGCTPDSYT 291
           ++   M+  GC P  +T
Sbjct: 693 DVLKRMRDTGCEPSQHT 709

HSP 2 Score: 132.1 bits (331), Expect = 6.8e-31
Identity = 85/295 (28.81%), Postives = 135/295 (45.76%), Query Frame = 1


Query: 48  GVKPGFSTYLTLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRA 107
           G+KP   TY  LI++L    K E   + + +++  GL+ +V +YN +I+  CK  +++ A
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412

Query: 108 SEIFRDLHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDG 167
            ++   +  + +SPN  TYN LI GYC++ N+ KA  +L  +L+ +  PD+ T+NSLIDG
Sbjct: 413 VDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDG 472

Query: 168 LCQAHKHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPD 227
            C++   + A+   + M +  + PD  TY  +I S C    V  +  L   ++  G+ P+
Sbjct: 473 QCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPN 532

Query: 228 TFSFNALIQSYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPD 287
              + ALI  Y                         CK G+ DEA  M   M    C P+
Sbjct: 533 VVMYTALIDGY-------------------------CKAGKVDEAHLMLEKMLSKNCLPN 592

Query: 288 SYTC-ILVNDTLISAVVLEFLLQWEK------QKVPYNGTTVLHELAVSGSCEDA 336
           S T   L++       + E  L  EK      Q      T ++H L   G  + A
Sbjct: 593 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621

HSP 3 Score: 130.6 bits (327), Expect = 2.0e-30
Identity = 86/301 (28.57%), Postives = 143/301 (47.51%), Query Frame = 1


Query: 3   SEAVMFLSKIGKKGYVPDSSIFSV---TLACVLKKLDLKETCRYLINRGVKPGFSTYLTL 62
           SEA+  + ++ + G  P+   ++V   +L    K    +E    ++ +G+ P   TY  L
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL 399

Query: 63  IEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGI 122
           I    K G +E     ++ + +  L  +  +YN +I   CK  +  +A  +   +  + +
Sbjct: 400 INGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKV 459

Query: 123 SPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFG 182
            P+VVTYN+LI G CR+GN + A  LL ++ D    PD +T+ S+ID LC++ + E+A  
Sbjct: 460 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 519

Query: 183 CFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALI---- 242
            F  + +  V P+ + Y  LI  +C  G V  +  +L +M      P++ +FNALI    
Sbjct: 520 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 579

Query: 243 ------QSYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSY 291
                 ++        K+G+QP   T   LI    K G  D A   F  M  +G  PD++
Sbjct: 580 ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAH 639

HSP 4 Score: 129.0 bits (323), Expect = 5.8e-30
Identity = 85/297 (28.62%), Postives = 144/297 (48.48%), Query Frame = 1


Query: 51  PGFSTYLTLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEI 110
           P   TY  LI++L  + +       +  +   G+  ++++Y ++ID LC     ++A E+
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380

Query: 111 FRDLHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQ 170
              +  KG+ PNV+TYN LI+GYC+ G +E A +++E++   +  P+  T+N LI G C+
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440

Query: 171 AHKHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFS 230
           ++ H+ A G   +M+E  V PD +TYN LI   C  G+   +  LL  M           
Sbjct: 441 SNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM----------- 500

Query: 231 FNALIQSYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYT 290
                            G+ PD +TY ++I S CK  R +EA ++F S++  G  P+   
Sbjct: 501 --------------NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM 560

Query: 291 CILVNDTLISA-------VVLEFLLQWEKQKVPYNGT--TVLHELAVSGSCEDAVLV 339
              + D    A       ++LE +L   K  +P + T   ++H L   G  ++A L+
Sbjct: 561 YTALIDGYCKAGKVDEAHLMLEKML--SKNCLPNSLTFNALIHGLCADGKLKEATLL 589

HSP 5 Score: 109.4 bits (272), Expect = 4.7e-24
Identity = 83/336 (24.70%), Postives = 143/336 (42.56%), Query Frame = 1


Query: 4   EAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYLIN---RGVKPGFSTYLTLI 63
           EA  ++SKI + G  PD   ++  +    ++ DL    +       +G +     Y  LI
Sbjct: 236 EANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLI 295

Query: 64  EALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGIS 123
             L    +++       ++ +D    +V +Y ++I  LC  +    A  + +++   GI 
Sbjct: 296 HGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK 355

Query: 124 PNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGC 183
           PN+ TY  LI   C     EKA+ELL  +L+    P++ T+N+LI+G C+    EDA   
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415

Query: 184 FTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSYFR 243
              M    ++P+  TYN LI+ +C   +V ++  +L +M    + PD  ++N+LI     
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLID---- 475

Query: 244 MTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYTCILVNDTLIS 303
                                  C+ G  D A  +   M   G  PD +T   + D+L  
Sbjct: 476 ---------------------GQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 535

Query: 304 AVVLE---FLLQWEKQKVPYNGTTVLHELAVSGSCE 334
           +  +E    L    +QK   N   V++   + G C+
Sbjct: 536 SKRVEEACDLFDSLEQK-GVNPNVVMYTALIDGYCK 544

HSP 6 Score: 105.1 bits (261), Expect = 8.9e-23
Identity = 75/290 (25.86%), Postives = 133/290 (45.86%), Query Frame = 1


Query: 4   EAVMFLSKIGKKGYVPDSSIFSVTL--ACVLKKLDLKETCRYLIN-RGVKPGFSTYLTLI 63
           +A+  L+K+ ++  +PD   ++  +   C     D       L+N RG+ P   TY ++I
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504

Query: 64  EALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKGIS 123
           ++L K+ ++E      D +   G+  +V  Y  +ID  CK   +D A  +   +  K   
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564

Query: 124 PNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGC 183
           PN +T+N LI G C +G +++A  L E ++    +P + T   LI  L +    + A+  
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624

Query: 184 FTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSYFR 243
           F +M+     PDA TY   I+++C  G +  +  ++ +M+ +G+ PD F           
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLF----------- 684

Query: 244 MTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYT 291
                         TY++LIK    LG+ + A ++   M+  GC P  +T
Sbjct: 685 --------------TYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHT 709

HSP 7 Score: 95.9 bits (237), Expect = 5.4e-20
Identity = 65/237 (27.43%), Postives = 114/237 (48.10%), Query Frame = 1


Query: 56  YLTLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLH 115
           Y TL+ +L + G ++   Q    ++ D +  ++Y+YN +++  CK   ++ A++    + 
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 116 YKGISPNVVTYNTLISGYCRNGNMEKAQELL-EM-LLDCRFKPDIFTFNSLIDGLCQAHK 175
             G+ P+  TY +LI GYC+  +++ A ++  EM L  CR     +T   LI GLC A +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYT--HLIHGLCVARR 305

Query: 176 HEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNA 235
            ++A   F +M + +  P   TY +LI+S C     S + +L++EM+             
Sbjct: 306 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME------------- 365

Query: 236 LIQSYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYT 291
                       + GI+P+ +TY  LI S C   + ++ARE+   M   G  P+  T
Sbjct: 366 ------------ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395

HSP 8 Score: 93.6 bits (231), Expect = 2.7e-19
Identity = 86/353 (24.36%), Postives = 143/353 (40.51%), Query Frame = 1


Query: 4   EAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETC---RYLINRGVKPGFSTYLTLI 63
           EA + L K+  K  +P+S  F+  +  +     LKE       ++  G++P  ST   LI
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609

Query: 64  EALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCK-GKLMDRASEIFRDLHYKGI 123
             L K G  +       ++++ G     ++Y   I   C+ G+L+D A ++   +   G+
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD-AEDMMAKMRENGV 669

Query: 124 SPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAH------- 183
           SP++ TY++LI GY   G    A ++L+ + D   +P   TF SLI  L +         
Sbjct: 670 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGS 729

Query: 184 -----------KHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKL 243
                      + +       +MVE  VTP+A +Y  LI   C +G++  +  +   M+ 
Sbjct: 730 EPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ- 789

Query: 244 HGIQPDTFSFNALIQSYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKV 303
                                  R  GI P    + AL+   CKL +H+EA ++   M  
Sbjct: 790 -----------------------RNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMIC 849

Query: 304 NGCTPDSYTCILVNDTLISAVVLEFLLQWEKQKVPYNGTTVLHELAVSGSCED 335
            G  P   +C          ++     + EK++    GT+V   L   G  ED
Sbjct: 850 VGHLPQLESC--------KVLICGLYKKGEKER----GTSVFQNLLQCGYYED 865

HSP 9 Score: 52.8 bits (125), Expect = 5.3e-07
Identity = 28/105 (26.67%), Postives = 53/105 (50.48%), Query Frame = 1


Query: 134 CRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAFGCFTEMVEWDVTPDA 193
           CR  N ++  EL       ++K  I  +N+L++ L +    ++    + EM+E  V P+ 
Sbjct: 166 CRKMNKDERFEL-------KYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNI 225

Query: 194 ITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQSY 239
            TYN ++  +C +G+V  +   + ++   G+ PD F++ +LI  Y
Sbjct: 226 YTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGY 263

HSP 10 Score: 51.6 bits (122), Expect = 1.2e-06
Identity = 64/298 (21.48%), Postives = 116/298 (38.93%), Query Frame = 1


Query: 4   EAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKET------CRYLINRGVKPGFSTYL 63
           +A   ++K+ + G  PD   +S   + +    DL +T       + + + G +P   T+L
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYS---SLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFL 714

Query: 64  TLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYK 123
           +LI+ L +   M+ G Q        G    + + + +++        D   E+   +   
Sbjct: 715 SLIKHLLE---MKYGKQ-------KGSEPELCAMSNMME-------FDTVVELLEKMVEH 774

Query: 124 GISPNVVTYNTLISGYCRNGNMEKAQELLE-MLLDCRFKPDIFTFNSLIDGLCQAHKHED 183
            ++PN  +Y  LI G C  GN+  A+++ + M  +    P    FN+L+   C+  KH +
Sbjct: 775 SVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNE 834

Query: 184 AFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQ 243
           A     +M+     P   +  +LI      G+  R T + + +   G   D  ++  +I 
Sbjct: 835 AAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIID 894

Query: 244 SYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYTCILV 295
                 G  K G+    Y                   E+F  M+ NGC   S T  L+
Sbjct: 895 ------GVGKQGLVEAFY-------------------ELFNVMEKNGCKFSSQTYSLL 907

[Close]

BLAST of ClCG05G006410 vs. NCBI nr
Match: gi|659076906|ref|XP_008438926.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis melo])

HSP 1 Score: 498.4 bits (1282), Expect = 1.0e-137
Identity = 245/311 (78.78%), Postives = 267/311 (85.85%), Query Frame = 1


Query: 1   MASEAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYLIN---RGVKPGFSTYL 60
           MAS+AVMFLSK GK+GYVP SS F+VTLAC+LKKLDLKETC    N    GVKPGFSTYL
Sbjct: 381 MASKAVMFLSKTGKEGYVPSSSTFNVTLACLLKKLDLKETCTIFDNCVQSGVKPGFSTYL 440

Query: 61  TLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYK 120
           TLIEALYK GKMEIGN+Y+DR+INDGLIS++YSYNMVIDCLCKGK MDRA EIFRDLH +
Sbjct: 441 TLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRAYEIFRDLHNR 500

Query: 121 GISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDA 180
           GISPN+VTYNTLI G+CRNGNM KAQELLE+LL+CRF+PDIFTFNSLIDGLCQAHKHEDA
Sbjct: 501 GISPNIVTYNTLIGGFCRNGNMNKAQELLEILLECRFRPDIFTFNSLIDGLCQAHKHEDA 560

Query: 181 FGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQS 240
           FGCFTEMVEWDV P+ ITYNILIRSFC IGDVSRSTHLLR+M+LHG+QPDTFSFNALIQ 
Sbjct: 561 FGCFTEMVEWDVPPNVITYNILIRSFCAIGDVSRSTHLLRQMQLHGLQPDTFSFNALIQG 620

Query: 241 YFRMTGFRK----------LGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPD 299
           Y      +K          LGIQPDNYTY ALIKS CK GRHDEARE+FLSMK NGCTPD
Sbjct: 621 YIGTNRVQKAEKLFCSMLRLGIQPDNYTYGALIKSLCKSGRHDEAREIFLSMKENGCTPD 680

[Close]

BLAST of ClCG05G006410 vs. NCBI nr
Match: gi|659076906|ref|XP_008438926.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis melo])

HSP 1 Score: 59.7 bits (143), Expect = 1.2e-05
Identity = 33/132 (25.00%), Postives = 60/132 (45.45%), Query Frame = 1


Query: 109 EIFRDLHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGL 168
           E+F  +   G++P    YN +I    ++ +++ A    + +      PD FT+N LI G+
Sbjct: 212 EVFGQIGLLGLNPTTRLYNAVIDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGV 271

Query: 169 CQAHKHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDT 228
           C+    ++A     +M      P+  TY ILI  F        +  +L+ MK   + P+ 
Sbjct: 272 CRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRADEAFKVLQTMKERNVVPNA 331

Query: 229 FSFNALIQSYFR 241
            +  +L+   FR
Sbjct: 332 ATMRSLVHGVFR 343

HSP 2 Score: 495.7 bits (1275), Expect = 6.7e-137
Identity = 245/311 (78.78%), Postives = 267/311 (85.85%), Query Frame = 1


Query: 1   MASEAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYLIN---RGVKPGFSTYL 60
           MASEAVMFL K GK+GYVP SS F++TLACVLKKLDLK TC    N    GVKPGFSTYL
Sbjct: 384 MASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYL 443

Query: 61  TLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYK 120
           TLIEALYK GKMEIGN+Y+DR+INDGLIS++YSYNMVIDCLCKGK MDRASE+FRDLH +
Sbjct: 444 TLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNR 503

Query: 121 GISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDA 180
           GISPN+VTYNTLI G+CRNGNM+KAQELLEMLL+ RF+PDIFTFNSLIDGLCQAHKHE+A
Sbjct: 504 GISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENA 563

Query: 181 FGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQS 240
           FGCFTEMVEWDV P+ ITYNILI SFC IGDVSRSTHLLR+MKLHGIQPDTFSFNALIQ 
Sbjct: 564 FGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQG 623

Query: 241 YFRMTGFRK----------LGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPD 299
           Y     F+K          LGIQPDNYTY ALIKS CK GRHD+ARE+FLSMK NGCTPD
Sbjct: 624 YTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPD 683

[Close]

BLAST of ClCG05G006410 vs. NCBI nr
Match: gi|778679015|ref|XP_011651072.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis sativus])

HSP 1 Score: 58.5 bits (140), Expect = 2.7e-05
Identity = 56/253 (22.13%), Postives = 104/253 (41.11%), Query Frame = 1


Query: 109 EIFRDLHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGL 168
           E+F  +   G++P    YN ++    ++ +++ A    + +      PD FT+N LI G+
Sbjct: 215 EVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGV 274

Query: 169 CQAHKHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDT 228
           C+    ++A     +M      P+  TY ILI  F        +  +L+ MK   + P+ 
Sbjct: 275 CRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNE 334

Query: 229 FSFNALIQSYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMK--VNGCTP 288
            +  +L+   FR        I PD   +  L++              F+  K  +     
Sbjct: 335 ATMRSLVHGVFRC-------IAPDK-AFELLLE--------------FVERKQGITQLVC 394

Query: 289 DSYTCILVNDTLISAVVLEFLLQWEKQKVPYNGT------TVLHELAVSGSCEDAVLVNR 348
           D+    L N+++ S  V+  +   ++  VP + T       VL +L +  +C   V  N 
Sbjct: 395 DNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDLKVTC--TVFDNC 443

Query: 349 VEAGNNQGNETLM 354
           V++G   G  T +
Sbjct: 455 VQSGVKPGFSTYL 443

HSP 2 Score: 53.1 bits (126), Expect = 1.1e-03
Identity = 57/308 (18.51%), Postives = 122/308 (39.61%), Query Frame = 1


Query: 1   MASEAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYLIN---RGVKPGFSTYL 60
           +  EA+  + ++   GY P+   +++ +          ET + L     R V P  +T  
Sbjct: 279 VVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMR 338

Query: 61  TLIEALYKT----GKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRD 120
           +L+  +++        E+  ++++R    G+   V   + ++ CL    +   A      
Sbjct: 339 SLVHGVFRCIAPDKAFELLLEFVER--KQGITQLVC--DNILYCLSNNSMASEAVMFLIK 398

Query: 121 LHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHK 180
              +G  P+  T+N  ++   +  +++    + +  +    KP   T+ +LI+ L +A K
Sbjct: 399 TGKEGYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGK 458

Query: 181 HEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNA 240
            E        ++   +  +  +YN++I   C    + R++ + R++              
Sbjct: 459 MEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDL-------------- 518

Query: 241 LIQSYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYTCIL 300
                         GI P+  TY  LI   C+ G  D+A+E+   +  +   PD +T   
Sbjct: 519 -----------HNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNS 557

Query: 301 VNDTLISA 302
           + D L  A
Sbjct: 579 LIDGLCQA 557

HSP 3 Score: 365.9 bits (938), Expect = 8.0e-98
Identity = 174/318 (54.72%), Postives = 232/318 (72.96%), Query Frame = 1


Query: 1   MASEAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYL---INRGVKPGFSTYL 60
           M  EA +FL K  +K Y PDSS F++ + C++++LD+ ETC  L   + +G+KP F+TY+
Sbjct: 374 MPKEAALFLRKAQEKSYFPDSSTFNIIITCLIRELDVNETCEILDSFVEQGLKPCFNTYI 433

Query: 61  TLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYK 120
           +LIEAL+K G+   GN+Y++ ++  GL+S+ +SYNMVIDC CK  +MDRASE FR++   
Sbjct: 434 SLIEALFKAGRDGEGNRYLNEMVQVGLVSNAFSYNMVIDCFCKAGMMDRASETFREMKES 493

Query: 121 GISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDA 180
           GI PN+VT+NTLI+GY +NG + KA+ LLEMLL+  FKP+IFTF+S+IDGLC+AH+  DA
Sbjct: 494 GIDPNIVTFNTLINGYSKNGEIGKARALLEMLLEYGFKPNIFTFSSMIDGLCRAHQISDA 553

Query: 181 FGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQS 240
           F CF EMVEW V P+ +TYNILIRS CV+GDV++S  LLR M+ +GI PD FSFNALIQS
Sbjct: 554 FNCFNEMVEWGVAPNVVTYNILIRSLCVVGDVAKSMKLLRRMQANGISPDVFSFNALIQS 613

Query: 241 YFRMTGFRK----------LGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPD 300
           + RM    K          LG+ PDN+TY A IK+ C+ GR DEA+E+FLS++ NGC PD
Sbjct: 614 FCRMNKVEKAQNLFVSMLALGLSPDNFTYCAFIKALCESGRFDEAKELFLSVEANGCIPD 673

Query: 301 SYTCILVNDTLISAVVLE 306
           SYTC L+ D LI     E
Sbjct: 674 SYTCNLIIDALIQQARFE 691

[Close]

BLAST of ClCG05G006410 vs. NCBI nr
Match: gi|731388251|ref|XP_010649533.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial isoform X1 [Vitis vinifera])

HSP 1 Score: 97.8 bits (242), Expect = 4.0e-17
Identity = 62/254 (24.41%), Postives = 119/254 (46.85%), Query Frame = 1


Query: 47  RGVKPGFSTYLTLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDR 106
           R V P  +T+ +L+  L+++       + + R +    +      + ++ CL   K+   
Sbjct: 318 RNVSPSDATFRSLVHGLFRSIDPSKAFELLSRFLEKEAVLPKVVCDTILCCLSNSKMPKE 377

Query: 107 ASEIFRDLHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLID 166
           A+   R    K   P+  T+N +I+   R  ++ +  E+L+  ++   KP   T+ SLI+
Sbjct: 378 AALFLRKAQEKSYFPDSSTFNIIITCLIRELDVNETCEILDSFVEQGLKPCFNTYISLIE 437

Query: 167 GLCQAHKHEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQP 226
            L +A +  +      EMV+  +  +A +YN++I  FC  G + R++   REMK  GI P
Sbjct: 438 ALFKAGRDGEGNRYLNEMVQVGLVSNAFSYNMVIDCFCKAGMMDRASETFREMKESGIDP 497

Query: 227 DTFSFNALIQSYFR----------MTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMF 286
           +  +FN LI  Y +          +    + G +P+ +T++++I   C+  +  +A   F
Sbjct: 498 NIVTFNTLINGYSKNGEIGKARALLEMLLEYGFKPNIFTFSSMIDGLCRAHQISDAFNCF 557

Query: 287 LSMKVNGCTPDSYT 291
             M   G  P+  T
Sbjct: 558 NEMVEWGVAPNVVT 571

HSP 2 Score: 87.8 bits (216), Expect = 4.2e-14
Identity = 66/272 (24.26%), Postives = 121/272 (44.49%), Query Frame = 1


Query: 48  GVKPGFSTYLTLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRA 107
           G+ P    Y  +I+AL K+  +++      ++  D      ++YN++I  +C+  ++D A
Sbjct: 214 GLSPSTRLYNAVIDALVKSNSLDLAYLKFQQMSLDNCNPDRFTYNILIHGVCRIGVVDEA 273

Query: 108 SEIFRDLHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDG 167
             + + +     SPNV TY  LI G+C     ++A  +LE +      P   TF SL+ G
Sbjct: 274 LRLVKQMESLDCSPNVFTYTILIDGFCNARRFDEAFRVLETMKGRNVSPSDATFRSLVHG 333

Query: 168 LCQAHKHEDAFGCFTEMVEWD-VTPDAITYNILIRSFCVIGD---VSRSTHLLREMKLHG 227
           L ++     AF   +  +E + V P  +   IL    C + +      +   LR+ +   
Sbjct: 334 LFRSIDPSKAFELLSRFLEKEAVLPKVVCDTIL----CCLSNSKMPKEAALFLRKAQEKS 393

Query: 228 IQPDTFSFNALIQSYFR----------MTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAR 287
             PD+ +FN +I    R          +  F + G++P   TY +LI++  K GR  E  
Sbjct: 394 YFPDSSTFNIIITCLIRELDVNETCEILDSFVEQGLKPCFNTYISLIEALFKAGRDGEGN 453

Query: 288 EMFLSMKVNGCTPDSYTCILVNDTLISAVVLE 306
                M   G   ++++  +V D    A +++
Sbjct: 454 RYLNEMVQVGLVSNAFSYNMVIDCFCKAGMMD 481

HSP 3 Score: 75.5 bits (184), Expect = 2.1e-10
Identity = 74/297 (24.92%), Postives = 123/297 (41.41%), Query Frame = 1


Query: 54  STYLTLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRD 113
           S  + L   L + G + +  + +  I N G   +     ++I    +  L    +E+F  
Sbjct: 150 SVRVALANVLNRKGPVILSVELLQDIRNSGCAITEDLLCILIGSWGRFGLAKYCAEVFGQ 209

Query: 114 LHYKGISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHK 173
           + + G+SP+   YN +I    ++ +++ A    + +      PD FT+N LI G+C+   
Sbjct: 210 VSFLGLSPSTRLYNAVIDALVKSNSLDLAYLKFQQMSLDNCNPDRFTYNILIHGVCRIGV 269

Query: 174 HEDAFGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNA 233
            ++A     +M   D +P+  TY ILI  FC       +  +L  MK   + P   +F +
Sbjct: 270 VDEALRLVKQMESLDCSPNVFTYTILIDGFCNARRFDEAFRVLETMKGRNVSPSDATFRS 329

Query: 234 LIQSYFRMTGFRKLGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPDSYTCIL 293
           L+   FR        I P         K+   L R  E +E  L   V  C  D+  C L
Sbjct: 330 LVHGLFR-------SIDPS--------KAFELLSRFLE-KEAVLPKVV--C--DTILCCL 389

Query: 294 VNDTLISAVVLEFLLQWEKQKVPYNG------TTVLHELAVSGSCEDAVLVNRVEAG 345
            N  +     L      EK   P +       T ++ EL V+ +CE  +L + VE G
Sbjct: 390 SNSKMPKEAALFLRKAQEKSYFPDSSTFNIIITCLIRELDVNETCE--ILDSFVEQG 424

HSP 4 Score: 364.8 bits (935), Expect = 1.8e-97
Identity = 178/316 (56.33%), Postives = 236/316 (74.68%), Query Frame = 1


Query: 1   MASEAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYL---INRGVKPGFSTYL 60
           ++ EA MFL K   +GY PDSS FS  + C++K LDLKETC  L   +NR +K GF+ YL
Sbjct: 368 LSVEAAMFLKKSESRGYCPDSSTFSTVVTCLIKGLDLKETCDILDRFVNRNIKLGFNAYL 427

Query: 61  TLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYK 120
            L+EALYK GK+E+GN+Y+++++  G +++VYSYNM+IDC CK  +MD+ S  FRD+  K
Sbjct: 428 ALLEALYKGGKVELGNRYLNQMLEYGFVANVYSYNMLIDCFCKTNMMDKGSRYFRDMSEK 487

Query: 121 GISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDA 180
           G++PN+VT+NTLISG+C+ G++ KA+ELL+MLL    KPD FTFNS+IDGLCQ ++ EDA
Sbjct: 488 GVAPNLVTFNTLISGHCKAGDVSKARELLKMLLQQGLKPDAFTFNSVIDGLCQTYQTEDA 547

Query: 181 FGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQS 240
           F CF+EMVEW VTP++ITYNILIRSFCV GDVS+S  LLR+M+  GI+PD FSFNALIQS
Sbjct: 548 FDCFSEMVEWGVTPNSITYNILIRSFCVKGDVSKSMTLLRKMQADGIKPDIFSFNALIQS 607

Query: 241 YFRMTGFRK----------LGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPD 300
           + RM   +K          L + PDN+TY A IK+ C+  R DEA+ +FLSM+ N C+PD
Sbjct: 608 FCRMNKLQKAQKLLISMLTLDLCPDNFTYCAFIKALCRSNRFDEAKALFLSMEENKCSPD 667

Query: 301 SYTCILVNDTLISAVV 304
           S+TC    DT ISA++
Sbjct: 668 SFTC----DTYISALI 679

[Close]

BLAST of ClCG05G006410 vs. NCBI nr
Match: gi|1021028415|gb|KZM86200.1| (hypothetical protein DCAR_023334 [Daucus carota subsp. sativus])

HSP 1 Score: 84.0 bits (206), Expect = 6.0e-13
Identity = 47/142 (33.10%), Postives = 75/142 (52.82%), Query Frame = 1


Query: 59  LIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYKG 118
           LI +  + G  +   Q  +++   G+  S   YN VID L K   +D A   F+ +    
Sbjct: 184 LIGSWGRLGLAKYCGQVFEQVSYLGICLSTRLYNAVIDALVKSNSLDLAYLKFQQMQVDN 243

Query: 119 ISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDAF 178
             P+  TYN LI G C+ G +++A  L++ +    + P++FT+  LIDG C A K ++AF
Sbjct: 244 CRPDRFTYNILIHGVCKAGVVDEAIRLVKQMEGSGYSPNVFTYTILIDGYCNAKKIDEAF 303

Query: 179 GCFTEMVEWDVTPDAITYNILI 201
           G   +M + +V P+  TY  LI
Sbjct: 304 GILDKMKKRNVKPNDATYRSLI 325

HSP 2 Score: 351.7 bits (901), Expect = 1.6e-93
Identity = 172/318 (54.09%), Postives = 228/318 (71.70%), Query Frame = 1


Query: 1   MASEAVMFLSKIGKKGYVPDSSIFSVTLACVLKKLDLKETCRYL---INRGVKPGFSTYL 60
           MA EA +F+ K+  +GY+PD+S F++T+AC++K LDL ETC  L   +  GVK GF+TYL
Sbjct: 340 MAREAALFMKKLAGRGYLPDNSTFNLTMACLIKGLDLDETCLILDSFVELGVKLGFNTYL 399

Query: 61  TLIEALYKTGKMEIGNQYIDRIINDGLISSVYSYNMVIDCLCKGKLMDRASEIFRDLHYK 120
            LI+ALY  GK   G+QY+D++  DGL+++V+SYNMVID  CK  +MDRA + FR+++ +
Sbjct: 400 ALIQALYNIGKFVEGDQYLDQMAKDGLLANVFSYNMVIDSFCKASMMDRARKTFREMYLR 459

Query: 121 GISPNVVTYNTLISGYCRNGNMEKAQELLEMLLDCRFKPDIFTFNSLIDGLCQAHKHEDA 180
           GI+P +VT+NT+ISG+C+ G + KA+E L MLL+  F PDIFTF+SLIDGLC+AH  +DA
Sbjct: 460 GIAPTLVTFNTIISGHCKIGEVHKAKEFLVMLLESGFDPDIFTFSSLIDGLCRAHMIDDA 519

Query: 181 FGCFTEMVEWDVTPDAITYNILIRSFCVIGDVSRSTHLLREMKLHGIQPDTFSFNALIQS 240
           F CF+EM +WDVTP+ +TYNILIRS C IGDV+R+  LLR+M+  GI  D FSFNALIQS
Sbjct: 520 FDCFSEMFQWDVTPNDVTYNILIRSLCAIGDVARAMKLLRKMQATGINADIFSFNALIQS 579

Query: 241 YFRMTGFRK----------LGIQPDNYTYAALIKSPCKLGRHDEAREMFLSMKVNGCTPD 300
           + RM    K          LG+ PDNYTY A IK+ C+  R DE   M  SM+  GC PD
Sbjct: 580 FCRMKKIEKAEKLFNSMLRLGLDPDNYTYGAFIKALCESERFDEVIRMLKSMEAKGCIPD 639

Query: 301 SYTCILVNDTLISAVVLE 306
           SYTC LV ++L+    LE
Sbjct: 640 SYTCNLVLESLVQKGCLE 657

The following BLAST results are available for this feature:

BLAST of ClCG05G006410 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP239_ARATH	4.4e-80	47.90	Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS...	[more]
PP306_ARATH	7.1e-38	28.10	Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana GN...	[more]
PP120_ARATH	7.8e-37	29.23	Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th...	[more]
PP407_ARATH	4.3e-35	30.56	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN...	[more]
PP445_ARATH	2.8e-34	32.30	Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN...	[more]

BLAST of ClCG05G006410 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5W1_CUCSA	4.6e-137	78.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G165700 PE=4 SV=1	[more]
A0A0A0L5W1_CUCSA	1.9e-05	22.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G165700 PE=4 SV=1	[more]
F6H743_VITVI	2.8e-17	24.41	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01320 PE=4 SV=...	[more]
A0A161ZJR7_DAUCA	4.2e-13	33.10	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_023334 PE=4 SV=1	[more]
A0A061EQQ8_THECC	2.4e-77	44.26	Pentatricopeptide (PPR) domain protein 40, putative OS=Theobroma cacao GN=TCM_02...	[more]

BLAST of ClCG05G006410 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G16890.1	2.5e-81	47.90	pentatricopeptide (PPR) domain protein 40	[more]
AT4G11690.1	4.0e-39	28.10	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G74580.1	4.4e-38	29.23	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G39710.1	2.4e-36	30.56	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G65560.1	1.6e-35	32.30	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of ClCG05G006410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076906\|ref\|XP_008438926.1\|	1.0e-137	78.78	PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitoc...	[more]
gi\|659076906\|ref\|XP_008438926.1\|	1.2e-05	25.00	PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitoc...	[more]
gi\|778679015\|ref\|XP_011651072.1\|	2.7e-05	22.13	PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitoc...	[more]
gi\|731388251\|ref\|XP_010649533.1\|	4.0e-17	24.41	PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitoc...	[more]
gi\|1021028415\|gb\|KZM86200.1\|	6.0e-13	33.10	hypothetical protein DCAR_023334 [Daucus carota subsp. sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006950	response to stress
biological_process	GO:0050896	response to stimulus
biological_process	GO:0008150	biological_process
biological_process	GO:0042775	mitochondrial ATP synthesis coupled electron transport
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0009651	response to salt stress
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G006410.1	ClCG05G006410.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 54..83 score:
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 85..113 score: 1.
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 251..291 score: 3.4E-9coord: 121..170 score: 3.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 181..238 score: 2.
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 159..193 score: 9.6E-9coord: 89..123 score: 2.1E-7coord: 254..288 score: 3.9E-8coord: 124..158 score: 1.2E-9coord: 194..228 score: 4.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 122..156 score: 13.57coord: 252..286 score: 12.233coord: 192..226 score: 12.025coord: 87..121 score: 11.367coord: 157..191 score: 12.025coord: 52..86 score: 7
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 69..276 score: 8.
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 3..294 score: 3.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG05G006410	Csa3G165700	Cucumber (Chinese Long) v2	cuwcgB222
ClCG05G006410	MELO3C006701	Melon (DHL92) v3.5.1	mewcgB427
ClCG05G006410	CSPI03G14850	Wild cucumber (PI 183967)	cpiwcgB226
ClCG05G006410	Cucsa.252670	Cucumber (Gy14) v1	cgywcgB451
ClCG05G006410	CmaCh00G004290	Cucurbita maxima (Rimu)	cmawcgB001
ClCG05G006410	CmoCh06G015530	Cucurbita moschata (Rifu)	cmowcgB743
ClCG05G006410	Lsi05G015790	Bottle gourd (USVL1VR-Ls)	lsiwcgB333
ClCG05G006410	CsGy3G014960	Cucumber (Gy14) v2	cgybwcgB203
ClCG05G006410	MELO3C006701.2	Melon (DHL92) v3.6.1	medwcgB416
ClCG05G006410	CsaV3_3G015050	Cucumber (Chinese Long) v3	cucwcgB225

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G006410	Wax gourd	wcgwgoB426
ClCG05G006410	Watermelon (Charleston Gray)	wcgwcgB160
ClCG05G006410	Cucurbita maxima (Rimu)	cmawcgB233
ClCG05G006410	Cucurbita maxima (Rimu)	cmawcgB320
ClCG05G006410	Cucurbita maxima (Rimu)	cmawcgB737
ClCG05G006410	Cucurbita maxima (Rimu)	cmawcgB796
ClCG05G006410	Cucurbita moschata (Rifu)	cmowcgB219
ClCG05G006410	Cucurbita moschata (Rifu)	cmowcgB316
ClCG05G006410	Cucurbita moschata (Rifu)	cmowcgB792
ClCG05G006410	Wild cucumber (PI 183967)	cpiwcgB499
ClCG05G006410	Cucumber (Chinese Long) v2	cuwcgB474
ClCG05G006410	Melon (DHL92) v3.5.1	mewcgB121
ClCG05G006410	Watermelon (97103) v1	wcgwmB286
ClCG05G006410	Watermelon (97103) v1	wcgwmB311
ClCG05G006410	Cucurbita pepo (Zucchini)	cpewcgB139
ClCG05G006410	Cucurbita pepo (Zucchini)	cpewcgB291
ClCG05G006410	Cucurbita pepo (Zucchini)	cpewcgB559
ClCG05G006410	Cucurbita pepo (Zucchini)	cpewcgB787
ClCG05G006410	Bottle gourd (USVL1VR-Ls)	lsiwcgB017
ClCG05G006410	Cucumber (Gy14) v2	cgybwcgB436
ClCG05G006410	Melon (DHL92) v3.6.1	medwcgB115
ClCG05G006410	Silver-seed gourd	carwcgB0072
ClCG05G006410	Silver-seed gourd	carwcgB0271
ClCG05G006410	Silver-seed gourd	carwcgB0680
ClCG05G006410	Silver-seed gourd	carwcgB0929
ClCG05G006410	Cucumber (Chinese Long) v3	cucwcgB494
ClCG05G006410	Watermelon (97103) v2	wcgwmbB229
ClCG05G006410	Watermelon (97103) v2	wcgwmbB238