CsGy3G014800 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G014800
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr3 : 10881851 .. 10885824 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCTCACAGAGATCTATCTCGTAATGATCTCCCTAAAATTGGATTGGAAGGCTTTGCCCTTATAGAAGAAATCTACTGCAAACGACTACCAAAGAGGAGACCAAGGCAAGTTGCTCTAGCTCCACCACAATCAATCATAGCAATTCATCCTCCACAAAGGATGGCCGAGTCATCACCGCCTATTCGTTGTAATCAATTGGCTAAAACTCACGAAGGTGAAAGCAAGTCATAGAGGAATCTATTAAACCATGAAAATTTAGAGTCATATGGTAACTCTTTATTTAATCAAAAGTGTGTGTATATATATATATATTTATATATTTTCATTTGGCATGATCTGGTTTCTACGTTTGTGTGGAAGCAAGCTTGTAAAGAGTCTAGTAAAACTTATAATGGCTCTGCTTGTAATAAATAAAGTTTATTATCAACTAAGAAGCTTACTTTGCTATCCTCTATTTGCAACTTTTCATCGTATGTTTCTCTTCTTGACTCACCTTTAACTTCTTGTTGATCAAGCAGTTGGGTTGACAGTTTTCTTTTAAGCATTTCATTACACATATATATGGTTATTAATTTTGCTACAAAACATTTGATTCATATGGAGAATTCTTATTTATTATATTGGTTATAGAAATTTCTACATTCTTTTGTTTCTTCCTATTATATCGGTCCCATCCGATAATGGTGTAGCATGTAGAGATATTAACACTCAGTACCCCTTGACATCCTAAACTCACAATTCAAAGTATATAATGGTATTCAAGGGAGCTTTCACTCTAGAATTTCATATTTAAAAAAAAAAAAAATTCATCACCAATTTATCCTTCCATTGTTAATATATTAGTAGGATTTTCTTATTACTTAGTAGAAGTTCTATGATCATTACGGATTAAAATAAAGCAACGCGAAAGGAAAAAAAAATTATTTACATACATATATAGTTATTTTTAACGGTGGATCCAAATCTATTTCGCTTAACGGGTTTTTGGTTCTTGATCATTTCTATATTTATTGTACTAAAAAATAATTTTAAAATGAATCGTTATATTATTAAAATTTTATAGTTTGGAGTAGAATCTAATCGATGTAAAACGAATGACTAGTTAACTTAAAAAAAAATAAAAATATATATTATAATATCAACTTTATTTAAAATTCTTTTAAAAAGAAATTCTCCCACAAATATTTTCACTCAATTCTTTTATTAATATTAAAAAAAAGACTTACTAAAAATATACCATAATTATTCCAAAACTTATTATTTATTATAATTGGACCATATCTCTTCAAAAAAAAAAGACGATAATGATTAAATTTATTATGGCAAAAAAATGGACTTCTAACCAAAATAATTGAGAATGTGAAAGTATACAGTTGTTCGTAATAAAATTTATTTGTTTTGTAACGTAATTTAAAATTTATGTTTAAATTAAACGTTTTGAGTTTAATCTTTAATATAAAAATTCATTTTATATTATAATAGTTTTCAATTTAACTTTCTCTTTCTTATTGTTTTCACGATCTCATATTTTAATTGAAAAAAATAGCTAAAAAAATATGTATTTGATTTAACTTTGAAAGAATTTAATTTTAAAAAAATATTTTTATTAAAATTTGAATTATTTGATAATAGTTAAAAAATATTAACTTTAAAATTTTATTTTAAACAATTGTTTAAGCTTAAATAAAAAGGATGTGCTTAACTTATAATTAAATTCGGGTGTATATTTATTGTATTTAATTTGTAAGAAGGATAAAGAAAAAAGAGAGAAAATAAAGTTTAGTACGACTTTGAAAGGCTTAATTCTGGACCTTACACTCCCAATACATCTTAAGATTTGTCTTTTTGATGATTAAAAAAAACTAATTTTGATGTAGGGAAGAAATAGAACGAATTTAATTAAATGATGTTGTGTCTTGTTATTGGATTAAGAAGTAAGGGGACTGAGTGAGACTTTATAACAAATATGGTAATAACATGGATGGAAATGCATATGCTCTAACTGATGTGGTACATTAATATTACACTTCTACTATAACTCAAGATCAGTTTTCTCATATTTATAAATGTCTCTACATTGTTGTGCTAAAGTGTTGTAATTAAGTTTGATTACCATATATATAATTGTTCCTAAAATTTATTTTAAGCAATACTTAAATACATTCATACATATACCAATCTTTATGTGCTTGCTTTCATTACAACATACCAAAAAAAATTATAATATTCTAAACAAGAAGTAAAATGAACATAGATACGCGAAATATAGAAGATTAATTTTTAGTCTATAAGTTTTGAATTTAATTTTGATGTGCTTTATAAAACTAGATTCATATTAACATTTATTACTTTGGTGATAGGCATAATGATAAGTACCTATTTGAATTTATGATAATCTATCGATAATAGAAAGTAAATAATTTGTAAATGTATTCAAATGTTTTCAAATGAATCACATAAATTAGTATTCATTCTAACTAAAACAATTGATTGATAAGCAAACTCTATAAAATGAAACACATATTAATTAAAAAGTAAAAATATGAAAATAAGAATTGAAGCTAAAAATGTAAAAAAAAAAAACCCTACCAACTTTGTTCTTTGTTCTTTGTCTTTGAAAAGACGAGTCAATGCAAAGATAACGTTGTTAGATTAAACAGAATATATCCCTTTCTACGGTTTCTCAATTTTGGGTATGCTCAACTTGTTGGCAAACTAATTAATTACCAAGTGTTTGCTTTGTTTTCGTTTTTTTTTTCAATTTACTTCTTTTTTCTTTAAATACTTCCATTTTAATTTTTGCTTGGTTTGATAAATGTCTAGGAAGTGTTTAACAACTGACAGGTAATTGAGTTGTATGGGTAAAAAAATTCACCCACCATTTGAGTGTATCTATAATTCAAGAGATTTAATTAACTAATTATATTTTTCATCTATTTATTCATGTCAACTCTCCTAATTACTCTCACTTATAATAATTATCGACACAACTCAACAATTAAAAAACAACCCTAATCAAATATCATATCGATAAATTATATGAAATTTAAAGGAACAATATTAATCACAATCATAGACATAGTAAATAGGTCAATAAAATTCCTCCACTATCCCTATATAGAAGAACATCTCCAACTACTTTATTCTCAATCCAAAAGGACTACTTATCTAAACTAAGTAACATAGGCAGATATTTTTTAATTATTGATAACACGAATCATATTATAAATAAAGTAACTCAATCAAAGGATACGTTTTTTTTACTTTGAACGTCTATATAATAATTACAATTTTTTTAATGTATATAGATCTAGATGAACCCAACAAATATACTCCCACTTACAAAATCTAATAAAAAAAATTATTTTCTACTAGTTTAACCTTTTATTTAATGAAAATAAAAAGCTCTTCAAGTAAACATTCCAATATGAGAGTCAAGTATACATTCTAATGGAAGCACCGAAAGTCTAAAGATTCCACAAATAATTTGAAAGAATAATAATCTTTCAAAACCATTATTCTTAGTAGAACAAATTCCAATTTTCTTAGCTTATTGAGAGATAAAAGTAATTTCCAACAAATTGGTAAGCCCAACCATTTCCAAAGTTTTTCTTTTTATATATATAAATAGTGGTTCATCTTCTTCATTTTCTATCCCCAAACCAAGAAAACCTAACCTTGAGAACACACAAAGTGCCATGGCAGCTCGTAATAACGATCTCGCTAGAATTGGATTGGAAGGCTTTATCTTTATAGAAGAACTCTACGACCGACCAAGGAGGAAGCCGAGGCATGTTGCTCCAGCTCCCCCGCAACCAGTCGTAGCAATTCATCCTCCACAAAGGAAGGTCGAGTCATCACCATCTATTCGTTGTGATCAATTGGCTAAAGCTCATGGAGGAATTATCATTAAAGAATGGGGTGGAAAGCGAGTCAACAAAGTTGTCCAAAAAACAGAGAGACCATAA

mRNA sequence

ATGGCAGCTCACAGAGATCTATCTCGTAATGATCTCCCTAAAATTGGATTGGAAGGCTTTGCCCTTATAGAAGAAATCTACTGCAAACGACTACCAAAGAGGAGACCAAGGCAAGTTGCTCTAGCTCCACCACAATCAATCATAGCAATTCATCCTCCACAAAGGATGGCCGAGTCATCACCGCCTATTCGTTGTAATCAATTGGCTAAAACTCACGAAGCTCGTAATAACGATCTCGCTAGAATTGGATTGGAAGGCTTTATCTTTATAGAAGAACTCTACGACCGACCAAGGAGGAAGCCGAGGCATGTTGCTCCAGCTCCCCCGCAACCAGTCGTAGCAATTCATCCTCCACAAAGGAAGGTCGAGTCATCACCATCTATTCGTTGTGATCAATTGGCTAAAGCTCATGGAGGAATTATCATTAAAGAATGGGGTGGAAAGCGAGTCAACAAAGTTGTCCAAAAAACAGAGAGACCATAA

Coding sequence (CDS)

ATGGCAGCTCACAGAGATCTATCTCGTAATGATCTCCCTAAAATTGGATTGGAAGGCTTTGCCCTTATAGAAGAAATCTACTGCAAACGACTACCAAAGAGGAGACCAAGGCAAGTTGCTCTAGCTCCACCACAATCAATCATAGCAATTCATCCTCCACAAAGGATGGCCGAGTCATCACCGCCTATTCGTTGTAATCAATTGGCTAAAACTCACGAAGCTCGTAATAACGATCTCGCTAGAATTGGATTGGAAGGCTTTATCTTTATAGAAGAACTCTACGACCGACCAAGGAGGAAGCCGAGGCATGTTGCTCCAGCTCCCCCGCAACCAGTCGTAGCAATTCATCCTCCACAAAGGAAGGTCGAGTCATCACCATCTATTCGTTGTGATCAATTGGCTAAAGCTCATGGAGGAATTATCATTAAAGAATGGGGTGGAAAGCGAGTCAACAAAGTTGTCCAAAAAACAGAGAGACCATAA

Protein sequence

MAAHRDLSRNDLPKIGLEGFALIEEIYCKRLPKRRPRQVALAPPQSIIAIHPPQRMAESSPPIRCNQLAKTHEARNNDLARIGLEGFIFIEELYDRPRRKPRHVAPAPPQPVVAIHPPQRKVESSPSIRCDQLAKAHGGIIIKEWGGKRVNKVVQKTERP
Homology
[Close]
BLAST of CsGy3G014800 vs. NCBI nr
Match: KGN57135.1 (hypothetical protein Csa_3G164540 [Cucumis sativus])

HSP 1 Score: 182.2 bits (461), Expect = 1.4e-42
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 74  ARNNDLARIGLEGFIFIEELYDRPRRKPRHVAPAPPQPVVAIHPPQRKVESSPSIRCDQL 133
           ARNNDLARIGLEGFIFIEELYDRPRRKPRHVAPAPPQPVVAIHPPQRKVESSPSIRCDQL
Sbjct: 3   ARNNDLARIGLEGFIFIEELYDRPRRKPRHVAPAPPQPVVAIHPPQRKVESSPSIRCDQL 62

Query: 134 AKAHGGIIIKEWGGKRVNKVVQKTERP 161
           AKAHGGIIIKEWGGKRVNKVVQKTERP
Sbjct: 63  AKAHGGIIIKEWGGKRVNKVVQKTERP 89

[Close]
BLAST of CsGy3G014800 vs. NCBI nr
Match: KGN57134.1 (hypothetical protein Csa_3G164530 [Cucumis sativus])

HSP 1 Score: 115.9 bits (289), Expect = 1.2e-22
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 0 

Query: 1  MAAHRDLSRNDLPKIGLEGFALIEEIYCKRLPKRRPRQVALAPPQSIIXXXXXXXXXXXX 60
          MAAHRDLSRNDLPKIGLEGFALIEEIYCKRLPKRRPRQVALAPPQSIIXXXXXXXXXXXX
Sbjct: 1  MAAHRDLSRNDLPKIGLEGFALIEEIYCKRLPKRRPRQVALAPPQSIIXXXXXXXXXXXX 60

Query: 61 XXXXCNQLAKTHEARN 77
          XXXXCNQLAKTHE  +
Sbjct: 61 XXXXCNQLAKTHEGES 76

[Close]
BLAST of CsGy3G014800 vs. TrEMBL
Match: tr|A0A0A0L5A8|A0A0A0L5A8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G164540 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 9.3e-43
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 74  ARNNDLARIGLEGFIFIEELYDRPRRKPRHVAPAPPQPVVAIHPPQRKVESSPSIRCDQL 133
           ARNNDLARIGLEGFIFIEELYDRPRRKPRHVAPAPPQPVVAIHPPQRKVESSPSIRCDQL
Sbjct: 3   ARNNDLARIGLEGFIFIEELYDRPRRKPRHVAPAPPQPVVAIHPPQRKVESSPSIRCDQL 62

Query: 134 AKAHGGIIIKEWGGKRVNKVVQKTERP 161
           AKAHGGIIIKEWGGKRVNKVVQKTERP
Sbjct: 63  AKAHGGIIIKEWGGKRVNKVVQKTERP 89

[Close]
BLAST of CsGy3G014800 vs. TrEMBL
Match: tr|A0A0A0L7Z0|A0A0A0L7Z0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G164530 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 8.2e-23
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 0 

Query: 1  MAAHRDLSRNDLPKIGLEGFALIEEIYCKRLPKRRPRQVALAPPQSIIXXXXXXXXXXXX 60
          MAAHRDLSRNDLPKIGLEGFALIEEIYCKRLPKRRPRQVALAPPQSIIXXXXXXXXXXXX
Sbjct: 1  MAAHRDLSRNDLPKIGLEGFALIEEIYCKRLPKRRPRQVALAPPQSIIXXXXXXXXXXXX 60

Query: 61 XXXXCNQLAKTHEARN 77
          XXXXCNQLAKTHE  +
Sbjct: 61 XXXXCNQLAKTHEGES 76

The following BLAST results are available for this feature:
BLAST of CsGy3G014800 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57135.11.4e-42100.00hypothetical protein Csa_3G164540 [Cucumis sativus][more]
KGN57134.11.2e-2296.05hypothetical protein Csa_3G164530 [Cucumis sativus][more]
BLAST of CsGy3G014800 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy3G014800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy3G014800 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L5A8|A0A0A0L5A8_CUCSA9.3e-43100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G164540 PE=4 SV=1[more]
tr|A0A0A0L7Z0|A0A0A0L7Z0_CUCSA8.2e-2396.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G164530 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G014800.1CsGy3G014800.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33484FAMILY NOT NAMEDcoord: 9..73
coord: 74..148

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G014800Cla021761Watermelon (97103) v1cgybwmB217
CsGy3G014800Csa3G164530Cucumber (Chinese Long) v2cgybcuB109
CsGy3G014800MELO3C006685Melon (DHL92) v3.5.1cgybmeB200
CsGy3G014800CSPI03G14650Wild cucumber (PI 183967)cgybcpiB110
CsGy3G014800Lsi05G015600Bottle gourd (USVL1VR-Ls)cgyblsiB184
CsGy3G014800MELO3C006685.2Melon (DHL92) v3.6.1cgybmedB201
CsGy3G014800CsaV3_3G014890Cucumber (Chinese Long) v3cgybcucB117
CsGy3G014800Cla97C05G087830Watermelon (97103) v2cgybwmbB196
CsGy3G014800Bhi01G000745Wax gourdcgybwgoB257
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G014800Melon (DHL92) v3.5.1cgybmeB149
CsGy3G014800Melon (DHL92) v3.6.1cgybmedB148
CsGy3G014800Melon (DHL92) v3.6.1cgybmedB165
CsGy3G014800Watermelon (Charleston Gray)cgybwcgB203
CsGy3G014800Watermelon (Charleston Gray)cgybwcgB230
CsGy3G014800Watermelon (97103) v1cgybwmB262
CsGy3G014800Wild cucumber (PI 183967)cgybcpiB149
CsGy3G014800Silver-seed gourdcarcgybB0072
CsGy3G014800Silver-seed gourdcarcgybB0294
CsGy3G014800Silver-seed gourdcarcgybB0700
CsGy3G014800Cucumber (Chinese Long) v3cgybcucB107
CsGy3G014800Cucumber (Chinese Long) v3cgybcucB149
CsGy3G014800Watermelon (97103) v2cgybwmbB222
CsGy3G014800Wax gourdcgybwgoB248
CsGy3G014800Cucumber (Gy14) v2cgybcgybB021
CsGy3G014800Cucumber (Gy14) v2cgybcgybB109
CsGy3G014800Cucurbita maxima (Rimu)cgybcmaB274
CsGy3G014800Cucurbita maxima (Rimu)cgybcmaB318
CsGy3G014800Cucurbita maxima (Rimu)cgybcmaB345
CsGy3G014800Cucurbita maxima (Rimu)cgybcmaB427
CsGy3G014800Cucurbita maxima (Rimu)cgybcmaB454
CsGy3G014800Cucurbita moschata (Rifu)cgybcmoB323
CsGy3G014800Cucurbita moschata (Rifu)cgybcmoB290
CsGy3G014800Cucurbita moschata (Rifu)cgybcmoB317
CsGy3G014800Cucurbita moschata (Rifu)cgybcmoB401
CsGy3G014800Cucurbita moschata (Rifu)cgybcmoB421
CsGy3G014800Cucurbita pepo (Zucchini)cgybcpeB303
CsGy3G014800Cucurbita pepo (Zucchini)cgybcpeB348
CsGy3G014800Cucurbita pepo (Zucchini)cgybcpeB406
CsGy3G014800Cucurbita pepo (Zucchini)cgybcpeB454
CsGy3G014800Cucumber (Chinese Long) v2cgybcuB146
CsGy3G014800Bottle gourd (USVL1VR-Ls)cgyblsiB136