CsGy1G030430 (gene) Cucumber (Gy14) v2

NameCsGy1G030430
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionsuccinate dehydrogenase subunit 6, mitochondrial
LocationChr1 : 28702013 .. 28711050 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGAAATGTAGGCTTTTCTATTGGGCTTTGGCTTGGCCCAAGGTGGAGAGAGGTCCAATAACCTTCACTTTCCTCACAAACACAAAACAAAACCAGCTTTGAAGAGCTAGAAGAGAGAACAGCTTTGAGGATTCTGATTTCAATCGGATTTAGCTTCTAAAATCTCAATCTTAATCTGTTTTTTGAGGGAGCAATCATGGAAGATTCGTCCTCTCAATCCTTCTTCAGGAAGCACTGGGAAGGCTACAAGGAGTTTTGGTCCGACAGATTCTCCATTCTCGACAACTATAGCCCCTACGTTCAGCGCCAGACCCCTCTTCCTTCATGGTCTTCCTCCGATGTCGAGGAATTTATTGCTTCTGATCCCGTTCATGGCCCCGTTGTAATTCATCCTTCACTTCTTTTCCTCTTTTGCTTCTTTTACTTCTTCTATTGCCTGCTTCTGAGTTGATGTCACTCGGTGTTTCATATCATCTCGGTTGTTTTTTTTTTATCCATTCTTAGATTCGTATATCTGAAATTAAATGTGTTCAATAATAGTGGGGTTTATTTTTCCTTTGAGCTTGGGATGATCTGAAATTTCCTTGCCCAGTGAGTGTTGATACCCGATGGCCTGAGTTATAATATAGCATAACTCTTAGTAGGGAACTGGACCAAATATTTCCTTTTTGAATAATTTTTATGGTTTGTTGCTGTCAATTTTGGAAGTACATTTAAAAAAAAAAAAAGAAAAATTGGATAGAAGGAACGATTTCATTGATAAATGAAATAAAGGAATAAAAACTCGTTATTGGTGAGTTACAAGAAAGAAGATCAATTGGAGATGAAAAAAGATGAGCTATGAAGTGCAAAATAGTGCTGATTTTTACACCAAAAGAAAGCAGTAGAAAGAACCCTATCCATAAAGCGCTCAAAAGAAGAGGATACACCATTCCGTTCTCCTCATAGATGCCAGAAGAACATACGGATAAGAGGCAACCAAAGAGTCTTCCTCAAACAACAAAATGGGTTCCCGCCAAACAAAAGCAAGGTGATCATAATTCACAGACCAACCAAAAGCTTCCAAAAGTATGTACCAAAAACGAGATGCAAAAGGATAATGCATAAAAAGATGACTAAGAGATTTAGCATTTGAATTGCACATAACACACCAAGATGCTGTCAAACGCATGATAAGGGGATCTGCTTTCATTTTAGAAGTACCTAACAGTAGTCTTTTGAAACCATTTCTATCATAACAAGTGAAATAATGTTTTCCTTTCGATTTTTTTTTTATATTTGTGAGTGTCCGGGCCAGCTTACGTGCACCTTAACTAATTTCATGGATCAACCCACCTGACTCTACAACATTTGGGTGTAAGAGAAACTCATAGAAAATTAATTCTTAGGTAAGTGGCTACCATAAATTGAACCCATGACCACTTTATTAGTTTTTTTTACCATTGGCCAATCCATCATGGTTTATTTTTCTTTTGAATTGGAATGTTATATTACATTCTTACAATAAAATTAATGCATTTTATTTTAACTCTTCGTTTTCTACTTAGTGTTACTTTGCTGTTTGCACTCATAATATATTGCAATTGTCTATCCTCAGAGTTTGTTATCAGTGTGTTTAATAAAGTACCTAAGAACCATATTGGTAAATGGTATTGGTTGTTATCATGCTGATTGATAGAACCTTGTAGTGCAGCGCTAGCTTATATTTGCCTGTGATTTTCCTGCCAAGACAAGGCTTTTTGATTCTCTCTCTGGTCCTATTATGTCCTGGTTTTTGTTGCTTGTGGCTGATAAACTGATTTTTTCTCTTTTCACTGTCTTCTAACCTTCAGCTATAAAAACAATTTCCAGTTTATTTTCAGTTATGATCTAGAGTCTAGATTATTATTATACTGCCTGTAATGCTAAATAGTTAGATCATGGATTCATTATATGATCTCGTGCCTTCTTAAGTTCAACTACTTGGCCGGGGTGTTTGCTCTATTCTTTTTCTGTTTAGTGTATTCCTAAACATTCTTCAGGATGAAATTTCGAAACTACTTAAGCCGCATATCACATTAAAAACAGTCGGGTTAAGCATGGTTCTCGTTATGTTTCACATTTTTAAAACATAGCGGGAAGGCAAAGGCAGATTCCTTAACTTTCTGTTACTAAGAGTTCATGTATATGCTTCTAGATTCCTCATTCATTGGCTGCTTATTATTCCTTTTTCAGTTGAAAACTGCCAGAGAGGCTGTAAACTTTGGTCTCACAGGAAGTGTTATTGGAGCTGTCTCGACTGCAGGTGTTGCATGGAAATACTCAAGAAGTTTACATGGTATTCAACTCACTTGTCTTTCCATTTAACTGCCTGCTTCATATCAGTAAAGGAATACCAGTAGAATTCAAAATATTCATTTACTTTACTACTGCTGACATTAGCAATTGTTTATTATTTTTTAATTTTAAGTATAACATGGTTCAACGAAATCTGCAGTCACATCTCTTCAAGTTACATTCCTTTTCTTGTTTCCATCTTTATGCAAGTTAAAATGACTTTTTCAACCAATGCAGCACATTGTTATTTTCTTTGGCTAAAAGTAAAACCTTTGGTGGTACTATACTATACTTACCACTCAAATAGGTTATGAGTTTGGTTGACATGAACATATACAGTATACTTGCTTAAAGCAATTTGCGATTTATTTAATAGGGGGATATATTGATTAGTCCCAAGTTAGGAAAGTGTAATGTCATGTTGTAGAATACTGAGATCCTTAAGGCTCCAATTCTTGTTTAGGAGCTGGCTTTGTTTGTCAAGATCTTAAGAATCTTTTTTGTTTAAATCTGCTGCGTCCAAGCAAACGAACTATCTTGGTGAAATGTTTACTATGAGCATTGTGTTCTACATCATACCAAAGCCACAAGTTTCATCATACCAAAACCAGAAGATTCAGCAGTGAAGAGTTAGCGCAACATAGCATTCATACAGTAGAAGAAGACACAAGACAGTGATTTATTGGGGGAAGCGTATAAGTCAATCCTCCTTCAGCACGAGCAACTTCCACCCTCCCAAATCCCTTCTAAGTTCAGCTCTCTTGTCGATACGTGTGGTCTACAACTGCAGGTAATCTCCTTCCCTTGACCATGAAGATTCTATCCTGGAATACAATGATAAAATAAGGCAACAGCGCTGAAGCATTTCTTACAATCTATTTATTCGTACATAGTTCTAATCCAAGAATCGAAGAAGTCGGACATTGATCACCAATTCATCAAATAAATTTGGAGTTCAAATGGAATCGGCTGGACATTTGTAGAGGATTTTGGAAGATCGGGTGGCATGCTTACAACATGGGACAAAAGCATGGTTGCTCAATTGAATTCCTCAAGGCGGGTATTCTTTTTCAGTAAAATTCAAGATTCAATGCAACAATGTCTGTTGGGTGACCAATATATGGAGCAACTCTAATTACAGAGAAAGGAAATTCCTCTGGCCGGAACTGATTTCTCTATCACATTACTGTTTGGAACCATGGTGCTTAGGAGAAGACTTCAATATAACCAGATGAGCCCATGAAAGATCCCCATTGGGTAGGACAACAAAGGGAATGAAAAAGTTCAACAATTTCATCAAGGAAGCTGCCTTATAGGGCATACCCTTATCAAATGGACTGTTTACTTGGTCTAGAAAAGGAATTTCAAATTCACATTCTCTAATTCTTTGTTTCCTTGTTACCAAGAACTGGGACGACTTACTTCCAATTCCACTGTCAATCGAATAGCAAGAATTTTTTCAGATTGTTTTCCACTGCTAATGGAAACATGTTCGATAAGCTGGGCCTTAGTCCTTTCCGTTTCTGTAACAGCTGGTTGTTTCCAGATTGCATAAGAGAAATTTGTAAAACGCTAGAAGAAGAACAATCAAATGGTTGGGCAGGATTTGTCTTAAATCTCAAACTTCGGAAAGTAAGGAGAAAGTATGGTCCACTGACTATGTAAAAGAAAGACAAGGGAAAGAGAATGATCTTATTCCAGAGTTGAGATTCTTTGATGCAAAGGCTGGATAGAGTAAAAGCATGGTCCACTGACTATGTAAAAGAAAGACAAGGGAAGAGAATGATCTTATTCCAGAGTTGAGATTCTTTGATGCAAAGGCTGAATAGAGTAGACTGTCTTTGACAGAGTATATTCATCTTGCAGTCAAAGGAGCTTTAATAACATTGCATTCCTTGGAAGAAAGAAATTTGATTCAGAAAGACAAATTGAATTGGTTGAGGTTGGGCAATGAGAATCATCCTTCTTCCATCGTTTCCCTGCAGCAAAAAAAAGGCGAAATCGTTTTCCTGAAATATTCTCTTCAGAAGAAGAACCAATAACCTCATTCAGAGCCGTTGAAGGTGAAATTCTGCATTATTTTGAACCCCTCTACAAAAAAGCTCACAGGCCCTAGAATCTTCCGCTCCAATCTATTTTGGAAACAGGTTGGTGCATCTCAAAATTCCTTCCTGATAACATCATTCAATGGGGAAGAAATCCTATAAGCCATAAAAGCTCTTGGGAAAAATAAGGCACCAGGTTCCGACAGTTTCACAGTGGAACTCTTCCTAGAATATTAGAATTTTTTCAAAGAGGTCTTCCAAAAATGTTCAACGAATTTGTGAAAATGGAAAACTATCTGTCTTGTTCCAAAAAAAGGAAGAATCCCTCAAAGATTTTCAGCCCATTAGTCTGACCACTTCTTCCTATAAAATCATTACCAAAGTCTTGGCAGAAAGAGTGAAGAAAGTCATGCCCTCAATAATAGCAAATATTCAAAGTGCTTTCTATAAGAGACAGCCAAATTTTGGATCCAATCCTTATAGCAAACGAGGTAGTGAAGGACTACCGAGCAAGGAAGAAAAAAGGTTGGATTCTCAAAATTGACCTCGAAAAGGCATTTGACTGAGTAAACTGTAGTTTTCTAGACAACACCCTCAAGCATATGGGTTTTCATCCAAAATGGATTGAATGGACAAATGTATGTATCCGACACCCAAAATTCTTGATCTTTATTAATGGTCGACCGCAAGGCTTCATCCAAGCATCAAAAGGTATACCCCAAGGAGATACACTATCCCCCTTCTTATTTCTTCTAATCAGTGAGGTTCTCAGCCTATTAATCTCACAGGCACATCAGAGTGGTTTATTCGAAGGGTTTACGGTTGGGACAGACAAAATCCACCTCTCCATCTGATAAGCGCATAAAATGTGCTTATTTTTACTTCTTATTTAGGGTTGATTTTATTGGATTTAATTTGTTTGATAGTGTTTCTTAGCAAATTATGGCTAATTTATCATTTTGGATAAAAATACACGAAAACGGGCAAACCCAAGTTAATTGGAACAAAAATGAAGGAAATATGTGAAATTAAGAAAATTTCTCTAGAAGAAGGGCTGTGTTGCAATGCTACCTATAGAGTTGCAATGACGCCCACAAGGAGATGATGCGTCGAGTGGTCCCATGCGTCTGATGAGTAGGCGTCAAAAGTAGACAGCGTTGCAACGTTGTGCACTTAGTGCACTCAGCAAACAATTAGTGCGGTTGTGAAGATGCTCTACAACGTCACACTGCACCTATAGCGTTGCAAGGCTCTCCCTGTCCAACATGTATAAATAGGGCTTCAATTTGTCATTTTAAGCTTCCCATTTGATTCCAAAACATTCCAATCACGGGAATTTCTCCTCCTCCATACTTTCTTTCTTTTGTGCTACTTAGAATAGTGTTTCGTAGCAAATTATGGCTAATATTATTAGTCTTCTTTATTCAACTCAATTGAAACAAACCTAACCTCATTTTCCATTGCCTTAGATAAAATTAATTCGATTCTTGAATAGCTAAGTTAAAACCTAATTTTGATCCTTGAGGACGATACTCGTCCTTCTAAGCGGTTTTATTGCAACTTGACCATGTCCAATTGCTTGACCCCACATCACCATCCTCCAATTTGCCGATGACACACTTCTGTTTAGTCAATACAACGAGACATCTTTGAACAATCTTATTGATACAGTTGGTTTCTTTTAATGGTGTTCCGGTCAGAAAGTAAATTGGGAAAAATCAGCTCTATACGGAGTCAACATTGGCGCTTCCACTATCCAATCAACAGCTGTTCGAATGGGTTGTACAACTGGTTCCATTCCATTCACTTGCTTGGACTACCTCTAGGAGGTTATCCTAAAAAGCTATCCTTCTGGCAGCCTGTCATCGATAAAATTCATCTGAAACTCGATTGTTGGAATAAGTATAATCTATCTAGAGGTGGCTGCCTAACACTTTGCAATGCAGTTTTTGCTAACCTTTCAACCTATTATTTATCTTTCTTACAAATGATGAGGTCAGCAATCACAGAATTGGAAAAAATAATGTCCATTTTTTTCTGGGAAGGACAAAAAGGCAGCAAGCTAAACCACCTTGTGAAATGGAGCACCGCATCAAAAGCTTTATCTGATGGGGGTCTTGGCTTGGGAAATCTGAAAAACAGGAACTTAGCCTTGCCGTTCAAATGGAATTGGCGTTTTTTAAGGAACCAGAGGCATTTTACTGCAAGATCGTCAAAAGTATACATGGCAGTGGCACTGATGAATTTGAATGGCATTCCTTTGGGAAGTTTGGGCTTAGTTTATGCTGCCCATGGATTAGTATCTAAAAAATATGGTCAAAATTTAATCATTTTGCAACCTTTAAATTGGGTGATGGAAGAAGAATTGCATTCTGGGAAGCTCCTTGGTGCTCGGAACAGTCAATAAAACAGGTTTTTCCTAATCTGTACCGTATTGCAACCAACAAAGAAGGCAATGAATGATCTCATTGGGACCCTGCAACTCCATCCTGGAATCCTTCTTTTCGATGTGCTCTAAAAATGAAGAAATTGCAGATTTTCAAGCACTTCTATCTAGCATCCATGGTAAAACTCTATCCCATGCAGCAGATTCTAGACTTTGGTTATTGGATTCCTCAGGTAAGTTCACCGTTAAATCCCTTTCCCAGTTTCTAACTGCCTTGCATTCTCTTGAAAAGAACATCTATCAAGCAACATGGAAATCAAAAAGTCCCAAAAGAGTGAACGTTCGAATTTGGGTAATGCTTTTTGGATCACTTAATTGCTCGGTCACTCTTCAATCAAAACTCCAAGGCCCTGCAATTTCCCCCTCCATTTGTCCACTTTGTAAAGCTTCTGGAGAGGATCTATAACATCTTTTCTTCGAATGCTCATTCTCTGGTAAGTGTTGGTGGAAACTATTTTCCCTTTTTAACTTGCAATGGGTCTTTGGACAATCCTTCAAAGACAATGTGCTTCAAGTTCTCAGCAGTCCACATTTACCTCCAAAAGCACAAACGCTATGGTTTAATGCAGTTAAAGCCTTTCCTCCAAAAGCACAAATGCTATGGTATAATGTGAATGCGGTTAAAGCCTTTCTCTTAGCACTCTGGTTCATACGAAATCATGGAGTTTTTCATGACAAATTCTATGACTGGTCAGATCGTTTTGCCTCAGCTCGCCTTCTTGCTTCGTCTTGGTGCTCTGTATCTAAATTGTTTGGTGATTACTCAATTCAAGACATATGCCTCAATTGGACTGTGTTCATAACCTCTATCTAATTTCCCTAGGTTCTAGTAATTTATGTTTCGATATTATGTGAGTAGGCCTCTTTTTGGTATTCACGAGGTGTATTGTACTTTTTCCTTTGAATCCCATTGTATCTGTCATCTGAATTCATGCCTCAGATTTCATCAATACAATCTGTTTCCTTTTCAAAAAACAAAAAAAGAAGGAAGGAAAAAGAGCATTGTGTTCTATGTATAAAGATGCATAAAATGCTAGTTAACGATTGGTGTGCTTACTCCGTAGTTGTGTTTTGACAGGCGCTGGGCTGTCGTTCCTTGCGGGGGGTGTATTCGGTTGGACTTTTGGCCAAGAGATCGCAAATCATTGGTATCAACTCTACAGGGTGGATACCATGGCTGCACAAGTTAAGTTTATGGAGTGGTGGAGAAACAAGAGTGAGGGAAGTTCTTAAAACTCTGATTTGCGTTGAAGCAGCAGAGCGGCAAACACTGCAGCTGCCATCTAAAATAAAAATGTAAGTGCCACCTGTTGAAATACAATGGTTGATTGGTTTGTTTTGTGATGAACTCTTCTTCCAACCTTTCAAGTTTAGAAAAGTACTCTCCTTTTTTATCTTCTGGAAATGACTCATTCATTTGCAAGCTTGTTAGAGAATGTACCCATCTTTACCAAATAAACTCAATCTTGGAGGTTAGTTAGGGTCTAAAGCATGTCCAAAATGGATACACTTGAAAGAATATTGGCTAAACTATAAAATAGGTAACCTTGAACTGTGCTTTGGTTTTAAAAAAAAACTGCAAAGTTGCAATAATATGCTTTGGGTTTTTAAAAATGTTTTAAAACTATCCTTAAGAGTAGAAGTTTGATTGAAAGAAACTGAAATTTGGAATGGTGTGGCAGTGATCTAGGATGAAAGTTGAGACTGATGCACTATTTCAGATCATTTTGTCACAGTATCATGTTTCAATTTTTGCTAAATAATATTCCAATGGATGTCCATCCCAAGGTAGGATAAGTTTTGAAATGTTTATGTAAAGACAAATGTATTGTTGTAATTTTGAAAGAAATGACAGTTTGGAGATGTTTTTATAATTTATCAAATTCCACTCTCATTCCACATGTTTTTTTCTCTTTTGAAAGTATTGTTGTTTTGCATATCCTTACTTTCAAAATGCCAAGCATGAAAATAACCCTATTAAATCTTTCCATTTAGAAAGAAAATGTAAGAATGGTCAAAGAAAGGAGGATTGAAGGTTCCACCATATATCAAACCCCCTACCTCCAAATTTGTTCCTTGCTTTCTTAAATGCGATTTTAATAGGATTTTCTTTCTTTCTTTTTTCATATTTGGATGCATCCTCAGAATGTGTGATGTTTTGATTTAATTTTAAATTGAAAAACTCTTAAGGAAATTGATAAAAATAACAAATTTGTTATTATTAGTTAATG

mRNA sequence

TGGAAATGTAGGCTTTTCTATTGGGCTTTGGCTTGGCCCAAGGTGGAGAGAGGTCCAATAACCTTCACTTTCCTCACAAACACAAAACAAAACCAGCTTTGAAGAGCTAGAAGAGAGAACAGCTTTGAGGATTCTGATTTCAATCGGATTTAGCTTCTAAAATCTCAATCTTAATCTGTTTTTTGAGGGAGCAATCATGGAAGATTCGTCCTCTCAATCCTTCTTCAGGAAGCACTGGGAAGGCTACAAGGAGTTTTGGTCCGACAGATTCTCCATTCTCGACAACTATAGCCCCTACGTTCAGCGCCAGACCCCTCTTCCTTCATGGTCTTCCTCCGATGTCGAGGAATTTATTGCTTCTGATCCCGTTCATGGCCCCGTTTTGAAAACTGCCAGAGAGGCTGTAAACTTTGGTCTCACAGGAAGTGTTATTGGAGCTGTCTCGACTGCAGGTGTTGCATGGAAATACTCAAGAAGTTTACATGGCGCTGGGCTGTCGTTCCTTGCGGGGGGTGTATTCGGTTGGACTTTTGGCCAAGAGATCGCAAATCATTGGTATCAACTCTACAGGGTGGATACCATGGCTGCACAAGTTAAGTTTATGGAGTGGTGGAGAAACAAGAGTGAGGGAAGTTCTTAAAACTCTGATTTGCGTTGAAGCAGCAGAGCGGCAAACACTGCAGCTGCCATCTAAAATAAAAATGTAAGTGCCACCTGTTGAAATACAATGGTTGATTGGTTTGTTTTGTGATGAACTCTTCTTCCAACCTTTCAAGTTTAGAAAAGTACTCTCCTTTTTTATCTTCTGGAAATGACTCATTCATTTGCAAGCTTGTTAGAGAATGTACCCATCTTTACCAAATAAACTCAATCTTGGAGGTTAGTTAGGGTCTAAAGCATGTCCAAAATGGATACACTTGAAAGAATATTGGCTAAACTATAAAATAGGTAACCTTGAACTGTGCTTTGGTTTTAAAAAAAAACTGCAAAGTTGCAATAATATGCTTTGGGTTTTTAAAAATGTTTTAAAACTATCCTTAAGAGTAGAAGTTTGATTGAAAGAAACTGAAATTTGGAATGGTGTGGCAGTGATCTAGGATGAAAGTTGAGACTGATGCACTATTTCAGATCATTTTGTCACAGTATCATGTTTCAATTTTTGCTAAATAATATTCCAATGGATGTCCATCCCAAGGTAGGATAAGTTTTGAAATGTTTATGTAAAGACAAATGTATTGTTGTAATTTTGAAAGAAATGACAGTTTGGAGATGTTTTTATAATTTATCAAATTCCACTCTCATTCCACATGTTTTTTTCTCTTTTGAAAGTATTGTTGTTTTGCATATCCTTACTTTCAAAATGCCAAGCATGAAAATAACCCTATTAAATCTTTCCATTTAGAAAGAAAATGTAAGAATGGTCAAAGAAAGGAGGATTGAAGGTTCCACCATATATCAAACCCCCTACCTCCAAATTTGTTCCTTGCTTTCTTAAATGCGATTTTAATAGGATTTTCTTTCTTTCTTTTTTCATATTTGGATGCATCCTCAGAATGTGTGATGTTTTGATTTAATTTTAAATTGAAAAACTCTTAAGGAAATTGATAAAAATAACAAATTTGTTATTATTAGTTAATG

Coding sequence (CDS)

ATGGAAGATTCGTCCTCTCAATCCTTCTTCAGGAAGCACTGGGAAGGCTACAAGGAGTTTTGGTCCGACAGATTCTCCATTCTCGACAACTATAGCCCCTACGTTCAGCGCCAGACCCCTCTTCCTTCATGGTCTTCCTCCGATGTCGAGGAATTTATTGCTTCTGATCCCGTTCATGGCCCCGTTTTGAAAACTGCCAGAGAGGCTGTAAACTTTGGTCTCACAGGAAGTGTTATTGGAGCTGTCTCGACTGCAGGTGTTGCATGGAAATACTCAAGAAGTTTACATGGCGCTGGGCTGTCGTTCCTTGCGGGGGGTGTATTCGGTTGGACTTTTGGCCAAGAGATCGCAAATCATTGGTATCAACTCTACAGGGTGGATACCATGGCTGCACAAGTTAAGTTTATGGAGTGGTGGAGAAACAAGAGTGAGGGAAGTTCTTAA

Protein sequence

MEDSSSQSFFRKHWEGYKEFWSDRFSILDNYSPYVQRQTPLPSWSSSDVEEFIASDPVHGPVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWYQLYRVDTMAAQVKFMEWWRNKSEGSS
BLAST of CsGy1G030430 vs. NCBI nr
Match: XP_011660175.1 (PREDICTED: succinate dehydrogenase subunit 6, mitochondrial [Cucumis sativus])

HSP 1 Score: 307.8 bits (787), Expect = 2.0e-80
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0

Query: 1   MEDSSSQSFFRKHWEGYKEFWSDRFSILDNYSPYVQRQTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSDRFSILDNYSPYVQRQTPLPSWSSSDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSDRFSILDNYSPYVQRQTPLPSWSSSDVEEFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHW 120
           PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHW 120

Query: 121 YQLYRVDTMAAQVKFMEWWRNKSEGSS 148
           YQLYRVDTMAAQVKFMEWWRNKSEGSS
Sbjct: 121 YQLYRVDTMAAQVKFMEWWRNKSEGSS 147

BLAST of CsGy1G030430 vs. NCBI nr
Match: XP_008450314.1 (PREDICTED: succinate dehydrogenase subunit 6, mitochondrial [Cucumis melo])

HSP 1 Score: 300.1 bits (767), Expect = 4.2e-78
Identity = 142/147 (96.60%), Postives = 145/147 (98.64%), Query Frame = 0

Query: 1   MEDSSSQSFFRKHWEGYKEFWSDRFSILDNYSPYVQRQTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWS+RFSILDNYSPYVQR TPLPSWSSSDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHW 120
           PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYS+SLHGAGLSFLAGG FGWTFGQEIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120

Query: 121 YQLYRVDTMAAQVKFMEWWRNKSEGSS 148
           YQLYR+DTMAAQVKFMEWWRNKSEGSS
Sbjct: 121 YQLYRLDTMAAQVKFMEWWRNKSEGSS 147

BLAST of CsGy1G030430 vs. NCBI nr
Match: XP_022927277.1 (succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita moschata] >XP_023531100.1 succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290.4 bits (742), Expect = 3.4e-75
Identity = 136/145 (93.79%), Postives = 140/145 (96.55%), Query Frame = 0

Query: 1   MEDSSSQSFFRKHWEGYKEFWSDRFSILDNYSPYVQRQTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWS+RFSILDNYSP+VQR+ PLPSWS SDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVQREKPLPSWSDSDVEEFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHW 120
           PVLKTAREAVNFGLTGS+IGAVSTAGVAWKYSRSLHGAGLSFLAGG FGWTFG EIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSLIGAVSTAGVAWKYSRSLHGAGLSFLAGGAFGWTFGHEIANHW 120

Query: 121 YQLYRVDTMAAQVKFMEWWRNKSEG 146
           YQLYRVDTM AQVKFMEWWRNKSEG
Sbjct: 121 YQLYRVDTMGAQVKFMEWWRNKSEG 145

BLAST of CsGy1G030430 vs. NCBI nr
Match: XP_022153276.1 (succinate dehydrogenase subunit 6, mitochondrial [Momordica charantia])

HSP 1 Score: 290.0 bits (741), Expect = 4.4e-75
Identity = 135/145 (93.10%), Postives = 141/145 (97.24%), Query Frame = 0

Query: 1   MEDSSSQSFFRKHWEGYKEFWSDRFSILDNYSPYVQRQTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWS+RFSILDNY+PYVQR+ PLPSWSSSDVE FIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYAPYVQREKPLPSWSSSDVEAFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHW 120
           P LKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFG E+ANHW
Sbjct: 61  PTLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGHEVANHW 120

Query: 121 YQLYRVDTMAAQVKFMEWWRNKSEG 146
           YQLYR+DTMAAQVKFMEWWRNK+EG
Sbjct: 121 YQLYRLDTMAAQVKFMEWWRNKNEG 145

BLAST of CsGy1G030430 vs. NCBI nr
Match: XP_022965868.1 (succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 288.1 bits (736), Expect = 1.7e-74
Identity = 135/144 (93.75%), Postives = 139/144 (96.53%), Query Frame = 0

Query: 1   MEDSSSQSFFRKHWEGYKEFWSDRFSILDNYSPYVQRQTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWS+RFSILDNYSP+VQR+ PLPSWS SDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVQREKPLPSWSDSDVEEFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHW 120
           PVLKTAREAVNFGLTGS+IGAVSTAGVAWKYSRSLHGAGLSFLAGG FGWTFG EIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSLIGAVSTAGVAWKYSRSLHGAGLSFLAGGAFGWTFGHEIANHW 120

Query: 121 YQLYRVDTMAAQVKFMEWWRNKSE 145
           YQLYRVDTM AQVKFMEWWRNKSE
Sbjct: 121 YQLYRVDTMGAQVKFMEWWRNKSE 144

BLAST of CsGy1G030430 vs. TAIR10
Match: AT1G08480.1 (unknown protein)

HSP 1 Score: 222.6 bits (566), Expect = 1.6e-58
Identity = 102/139 (73.38%), Postives = 116/139 (83.45%), Query Frame = 0

Query: 6   SQSFFRKHWEGYKEFWSDRFSILDNYSPYVQRQTPLPSWSSSDVEEFIASDPVHGPVLKT 65
           S+SF  K+W G K+FWSDR S  +NY+ + +R  PLPSWSSSDVEEFIASDPVHGP LKT
Sbjct: 4   SESFVGKNWNGLKDFWSDRLSFFENYTRFTKRDAPLPSWSSSDVEEFIASDPVHGPTLKT 63

Query: 66  AREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWYQLYR 125
           AREAV FG+TG+ +GAVSTA  AWKYSRS HGA LSFL GGVFGWTFGQE+ANH  QLY+
Sbjct: 64  AREAVTFGVTGAALGAVSTAAFAWKYSRSPHGAALSFLGGGVFGWTFGQEVANHTLQLYK 123

Query: 126 VDTMAAQVKFMEWWRNKSE 145
           +DTMAAQVKFMEWW  KS+
Sbjct: 124 LDTMAAQVKFMEWWERKSQ 142

BLAST of CsGy1G030430 vs. Swiss-Prot
Match: sp|Q941A6|SDH6_ARATH (Succinate dehydrogenase subunit 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH6 PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.8e-57
Identity = 102/139 (73.38%), Postives = 116/139 (83.45%), Query Frame = 0

Query: 6   SQSFFRKHWEGYKEFWSDRFSILDNYSPYVQRQTPLPSWSSSDVEEFIASDPVHGPVLKT 65
           S+SF  K+W G K+FWSDR S  +NY+ + +R  PLPSWSSSDVEEFIASDPVHGP LKT
Sbjct: 4   SESFVGKNWNGLKDFWSDRLSFFENYTRFTKRDAPLPSWSSSDVEEFIASDPVHGPTLKT 63

Query: 66  AREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWYQLYR 125
           AREAV FG+TG+ +GAVSTA  AWKYSRS HGA LSFL GGVFGWTFGQE+ANH  QLY+
Sbjct: 64  AREAVTFGVTGAALGAVSTAAFAWKYSRSPHGAALSFLGGGVFGWTFGQEVANHTLQLYK 123

Query: 126 VDTMAAQVKFMEWWRNKSE 145
           +DTMAAQVKFMEWW  KS+
Sbjct: 124 LDTMAAQVKFMEWWERKSQ 142

BLAST of CsGy1G030430 vs. Swiss-Prot
Match: sp|Q6ZCC4|SDH6_ORYSJ (Succinate dehydrogenase subunit 6, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH6 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.3e-30
Identity = 60/135 (44.44%), Postives = 83/135 (61.48%), Query Frame = 0

Query: 12  KHWEGYKEFWSDRFSILDNYSPYVQRQTPLPSWSSSDVEEFIASDPVHGPVLKTAREAVN 71
           +H EG K  W+  FS LD +     R  PLP W+ +DV+EFIASDPV+GP LK  RE+  
Sbjct: 5   EHVEGIKAHWAKNFSFLDYFKKVYGRDKPLPKWTDADVDEFIASDPVYGPQLKAMRESRK 64

Query: 72  FGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWYQLYRVDTMAA 131
           F L G+++G     G+A KYS++ HG  L+   G + G   G E+A HWYQLY+ D   A
Sbjct: 65  FALGGALVGGAHLGGIALKYSKAPHGVVLATGFGAICGAVVGSEVAEHWYQLYKTDKQGA 124

Query: 132 QVKFMEWWRNKSEGS 147
            ++F+ WW +K  G+
Sbjct: 125 NLRFIYWWEDKVAGN 139

BLAST of CsGy1G030430 vs. TrEMBL
Match: tr|A0A1S3BP04|A0A1S3BP04_CUCME (succinate dehydrogenase subunit 6, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103491959 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 2.8e-78
Identity = 142/147 (96.60%), Postives = 145/147 (98.64%), Query Frame = 0

Query: 1   MEDSSSQSFFRKHWEGYKEFWSDRFSILDNYSPYVQRQTPLPSWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWS+RFSILDNYSPYVQR TPLPSWSSSDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHW 120
           PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYS+SLHGAGLSFLAGG FGWTFGQEIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120

Query: 121 YQLYRVDTMAAQVKFMEWWRNKSEGSS 148
           YQLYR+DTMAAQVKFMEWWRNKSEGSS
Sbjct: 121 YQLYRLDTMAAQVKFMEWWRNKSEGSS 147

BLAST of CsGy1G030430 vs. TrEMBL
Match: tr|A0A2C9V092|A0A2C9V092_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G103800 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.0e-67
Identity = 122/142 (85.92%), Postives = 130/142 (91.55%), Query Frame = 0

Query: 6   SQSFFRKHWEGYKEFWSDRFSILDNYSPYVQRQTPLPSWSSSDVEEFIASDPVHGPVLKT 65
           SQSFFRKHWEGYKEFW +RFS LDNYS +++R  PLPSWS+SDVEEFIASDPVHGP LKT
Sbjct: 5   SQSFFRKHWEGYKEFWGERFSFLDNYSRFIKRDKPLPSWSASDVEEFIASDPVHGPTLKT 64

Query: 66  AREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWYQLYR 125
           AREA  FGLTGS+IGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHW QLYR
Sbjct: 65  AREAAQFGLTGSIIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWMQLYR 124

Query: 126 VDTMAAQVKFMEWWRNKSEGSS 148
           +DTMAAQVKFMEWW NK +G S
Sbjct: 125 LDTMAAQVKFMEWWENKCDGRS 146

BLAST of CsGy1G030430 vs. TrEMBL
Match: tr|A0A2P4IYT2|A0A2P4IYT2_QUESU (Succinate dehydrogenase subunit 6, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_63325 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 8.5e-67
Identity = 123/147 (83.67%), Postives = 136/147 (92.52%), Query Frame = 0

Query: 1   MEDSSSQSFFRKHWEGYKEFWSDRFSILDNYSPYVQRQTPLPSWSSSDVEEFIASDPVHG 60
           M +SSSQSFF+KH+EGYKEFW++RFS L+NY+ +VQR+ PLPSWS SDVEEFIASDPV+G
Sbjct: 1   MGESSSQSFFKKHYEGYKEFWTERFSFLENYARFVQREKPLPSWSDSDVEEFIASDPVNG 60

Query: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHW 120
             LKTAREAVNFGLTGSVIGAVSTAGVAWKYSRS+HGAGLSFLAGGVFGWTFGQE+ANHW
Sbjct: 61  FTLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSVHGAGLSFLAGGVFGWTFGQEVANHW 120

Query: 121 YQLYRVDTMAAQVKFMEWWRNKSEGSS 148
            QLYR+DTMAAQVKFMEWW  KSEG S
Sbjct: 121 LQLYRLDTMAAQVKFMEWWEKKSEGQS 147

BLAST of CsGy1G030430 vs. TrEMBL
Match: tr|A0A2N9FBI6|A0A2N9FBI6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16138 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.1e-66
Identity = 121/142 (85.21%), Postives = 129/142 (90.85%), Query Frame = 0

Query: 6   SQSFFRKHWEGYKEFWSDRFSILDNYSPYVQRQTPLPSWSSSDVEEFIASDPVHGPVLKT 65
           S+SFFRKHWEGYKEFW++RFS L+NYS +V R  PLPSWS SDV+ FIASDPVHGP LKT
Sbjct: 14  SESFFRKHWEGYKEFWTERFSFLENYSRFVNRDKPLPSWSDSDVDHFIASDPVHGPTLKT 73

Query: 66  AREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWYQLYR 125
           AREAVNFGLTG+VIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFG EIANHW QLYR
Sbjct: 74  AREAVNFGLTGTVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGHEIANHWLQLYR 133

Query: 126 VDTMAAQVKFMEWWRNKSEGSS 148
           +DTMAAQVKFMEWW  KSEG S
Sbjct: 134 LDTMAAQVKFMEWWEKKSEGQS 155

BLAST of CsGy1G030430 vs. TrEMBL
Match: tr|A0A2I4H6S2|A0A2I4H6S2_9ROSI (succinate dehydrogenase subunit 6, mitochondrial OS=Juglans regia OX=51240 GN=LOC109013999 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.2e-65
Identity = 118/141 (83.69%), Postives = 128/141 (90.78%), Query Frame = 0

Query: 7   QSFFRKHWEGYKEFWSDRFSILDNYSPYVQRQTPLPSWSSSDVEEFIASDPVHGPVLKTA 66
           QSFFR+HWEGYKEFW++RFS LDNYS +++R  PLPSWSS DV+EFIASDPVHGP L+TA
Sbjct: 10  QSFFRRHWEGYKEFWAERFSFLDNYSRFIKRDKPLPSWSSFDVQEFIASDPVHGPTLQTA 69

Query: 67  REAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWYQLYRV 126
           REAVNFGLTGSVIGAVSTAGV WKYSRSLHGAGLSFLAGGVFGWTFG E+ANHW QLYR+
Sbjct: 70  REAVNFGLTGSVIGAVSTAGVTWKYSRSLHGAGLSFLAGGVFGWTFGHEVANHWLQLYRL 129

Query: 127 DTMAAQVKFMEWWRNKSEGSS 148
           DTMAAQVKFMEWW  K EG S
Sbjct: 130 DTMAAQVKFMEWWERKCEGRS 150

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011660175.12.0e-80100.00PREDICTED: succinate dehydrogenase subunit 6, mitochondrial [Cucumis sativus][more]
XP_008450314.14.2e-7896.60PREDICTED: succinate dehydrogenase subunit 6, mitochondrial [Cucumis melo][more]
XP_022927277.13.4e-7593.79succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita moschata] >XP_0... [more]
XP_022153276.14.4e-7593.10succinate dehydrogenase subunit 6, mitochondrial [Momordica charantia][more]
XP_022965868.11.7e-7493.75succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT1G08480.11.6e-5873.38unknown protein[more]
Match NameE-valueIdentityDescription
sp|Q941A6|SDH6_ARATH2.8e-5773.38Succinate dehydrogenase subunit 6, mitochondrial OS=Arabidopsis thaliana OX=3702... [more]
sp|Q6ZCC4|SDH6_ORYSJ2.3e-3044.44Succinate dehydrogenase subunit 6, mitochondrial OS=Oryza sativa subsp. japonica... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3BP04|A0A1S3BP04_CUCME2.8e-7896.60succinate dehydrogenase subunit 6, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1... [more]
tr|A0A2C9V092|A0A2C9V092_MANES1.0e-6785.92Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G103800 PE=4 SV=... [more]
tr|A0A2P4IYT2|A0A2P4IYT2_QUESU8.5e-6783.67Succinate dehydrogenase subunit 6, mitochondrial OS=Quercus suber OX=58331 GN=CF... [more]
tr|A0A2N9FBI6|A0A2N9FBI6_FAGSY1.1e-6685.21Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16138 PE=4 SV=1[more]
tr|A0A2I4H6S2|A0A2I4H6S2_9ROSI1.2e-6583.69succinate dehydrogenase subunit 6, mitochondrial OS=Juglans regia OX=51240 GN=LO... [more]
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005749mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
Vocabulary: INTERPRO
TermDefinition
IPR034574SDH6
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G030430.1CsGy1G030430.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034574Succinate dehydrogenase subunit 6, mitochondrialPANTHERPTHR36708FAMILY NOT NAMEDcoord: 7..145