Bhi02G001226 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi02G001226
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	succinate dehydrogenase subunit 6, mitochondrial
Location	chr2 : 38397493 .. 38401288 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACGAAACAACCTTCACTTTCCTCACAGACGCATAACAAAACCAGCTTTGAAGAAGAACAGCCTTCAGGATTCTGATTTCAATCGGATTTAGCTTCTAAAATCTCAGAGAGCAATTATGGAAGATTCATCCTCTCAATCCTTCTTCAGGAAGCATTGGGAAGGCTACAAGGAATTTTGGTCCGAGAGGTTCTCCATCATCGACAACTATTCTCCCTACATCCAGCGCCAAACCCGTCTTCCTCCCTGGTCTTCCTCCGATGTCGAGGAATTCATTGCTTCCGACCCCGTTCATGGCCCTGCTGTAATTCATCCTTCACGTCCTTTCTTCTTTTACTTCTTTCACTGCCTGCTTTTCAGTTCTTTTCTGTCACTCTGTGTCTGCATATAATCTCGTTTGATTTCTTGATCGATGCTTGATGGGGTTCGTGGATTTTGCTGTTTCTTGAACCCCACATTTAAATTAGCCTTTGGGGGCGAACTTTCCAATTTGAGATTTATCCTTAGATTGGTATATCTGTAATTATATGTGTTCATTTACATTTTTGTCTGGAGATTGGGTAATAGAGTTGTTTTTCCTTTCAGTTTAGGATAATCTGAAATTTCCTTGCCCGATGATTGTTGATGAACAATGGCTTAAATTATAATATTGTATGCCTTATCTCCTTTCCCTCCCCTTGTCCTGCAGTATTGCTTAAAATGCTTGAAGGAAATTATGAGTCGGGCCTTATACTTTTCAAGTCTTTTGGTGTGGTGAAAAGTATGATTCTTAGTAAGGAACTGGACCAAATGTTTCCTTTTTAGTACGAGTTTTATGGTTTGTTGCTGCCTATTTTAGAAGTACTGAAAACTTTTTTTCAGAGAAGAAATGATTTCATTGATAAATGAAATAAAGTAGTAAAAGTTCCAAACACCTTATTGGTGTGTTACAAAAAAGAAGTCCAATTGGAAATGAAAAAAGATAAGCTATAAAGTGCAAAAGGGTGTTTATTTTTACATCAAAAGAAAGCAGTAGAAAGAACCCTATCTTTAAAGGGCTCAAAAGAAGAGGATGCATCCCTGGAAATGCAGCCATTTCGTTCTCCCCGAAGATGCCAGAAGAACATTCTAAGAGCCAACCAAAGAGTCTTCCTCAAACCACAAAATGGATGTCCCACCAAAACAAAAGCAAGGAGGTCATAGATTGAAGTAGGAAACGGCACAGACCAACCAAAAGTTTCCAAAAGAGTGAACTGAAACTGAGATGCAAAAGGTCGATGCATAAAAAGATGACTAAGAGATTGAGCATTTGAATGGCACATAACCCACCAAGAAGGAGACAAATGCATATAAGGAGTTCTCTGTTTATTTTAGAAGTACTTAATTGTGGTCTTTTGAATTTGTTTCTATCATAACAAGTGAAATTATATTTTCCTTTTGAATTGGAATGTTATATTACCATTCTTCCAATCCATTAATGCCTTTTATTTTAATTCTCCTTTTCTCAGTTAGTGTTACTCCGCTGTTTGCACTCATAATATATTGCAAACCTCGTCCAGAGTTTGGAATCAATTGCCTTTTAATGAAGTACCTATAAACTCTATTGGTAAATGGTAGTTATCATTCTGATTGATAGAACTTTGTAGTGTAGCACACCTATATGCCTGTGATTTCCCTGTGAAGACTTCTCTGCTTTTTTATTCTCTCTCTGGTTCTATTATATCCTGGTTTTCGTAGTCCGCAGTTGATTATCCCTCTTTTCACTGTCGTCTAGCCTTCTGTTATAGAACAATTTCCATTTTATTTTCAGTTATTATCAAGACCATTCTACTGCATGTAATGCTAAATAGTTAGATTATGGATTCATTATATGATCTCCCTTGCCTTCTTAAGTTCAACTACTTGGCCTGGGTGCATGCTCCATTCTTTTTCTGTAATGAGGTGATTGATAAATGGGTATGGGTTATTAGATTTGGTGGGTATTTATTACCCATGTTTGTTAAGCCCATAAAGAAAACCTATGGGTTATTAAAACCCTCTTTTTTATCCACTCAACACTCCCCTTTTTTATCCCCTCAAAACTAACCCTAAAAATCAATATATTTTCAATTCAAATCAACTCAACTCTGCACAACAAACACAGACAATAATTACCAACTCAACTCAACTTTGCAAACAAACACAAACAATTTAACTCCCCAGATAATTTAACTCTCCAGATAATAATTACCAACTCAACTCAACTCTCTACTTTTATCACATACCAAACACACCCTAAGTGTATTCCAACACATTCTTCCAGATGAAATTTCAATAATTACTTGAGCAGCATATCATCTTAAACACAGGCAGGTTAAGCATGATTGTTATTTTGTTTCACATTTTTCCAACATAGCGGGAAGTCAAAGGCAGATACCTCGACTTTCTGTTATTAAGAGTTCTTGTACATGCTTTTAGATTCCTCGTTCATTAGTTTCTTATTATTTCTTTTTCAGTTGAAGACTGCTCGAGAAGCTGTAAATTTTGGTCTTACAGGAAGTGTTGTTGGAGCTGTATCAACTGCAGGTGTTGCATGGAAATACTCAAGAAGTTTACATGGTATTCAACTGCCTTGTCTTTCCACTTAACTGCTTCATATCAGTAAATGAATACCAGTAGCGTTCAAACTATTCTTTTACTTTATTCCTGACATTTTAGCAGCTGATTCTTTTAGAATTTTAAGTATAACATGGTTCAACAATTGTGCTGCATTTTTATTTTTCATTGGCTAGAACCTTAGTTGGTACTATACTAACAACTCGAATAGGCCATGACTCACTAGTTTGGTTGACATGAGTGCATACTAGCTTAAGGCAACTATTCAACAATTTCATTTAACCAAGTTCAATGTTAGTCAGATTAGTCAACATTTTTATGTTCTGATGCAACAAGATGTTATTTGTAGCAAATAATTTATTTAATAGGGTGATAGTTTGGTTAGTCTCAAGTTGAAACATGTAATGTCCTGTGGTAGAATACTGAGATTCTCAAGGCACGAATTCTTGAATTTCAATCCTAAAAGAGTTGAGGAGCTGGCTTTATTGGTCAAGACCTTGCGAATCTTTTTCTATGCTTAAATCTGCGTCCAAGCAAACCAAAAGACACAATAAGCTAAGCGTAAACTTAACTAGCTTGTAGAAATGTTGACCATGAGCATGTGTTATGTTCTATGTAAAATGCTTGTAAAATATGGGTGTGCTTACCCTGTAGCTGTGTTTTGACAGGTGCTGGGCTGTCGTTCCTGGCAGGAGCTGCATTCGGTTGGACCTTCGGCCATGAGATTGCAAATCATTGGTATCAACTCTATAGGTTGGACACCATGGGTGCACAAGTTAAGTTTATGGAGTGGTGGAGAAACAAGAGTGAGGGAGGTTTTTAAAACTCTGATTTTGCAGTCGAAGCAGCAGCACACACTGCAGCTGCCATCTGAAATAAAAATGTAAGTGCAACTTTGTTGAAATACAATGGTTGATTGGTTTGTTTTGTGGTGAACTCTTCCGACCTCCCAAGTTTAGGAATGGACTATATACTTTTTTATCTTCTGGAAATGACATTCATTTGCAGTCATCTTTACCAAATACCTCCTATCCTGGGTGTGTGTTAGGGTCTAAAGCATGTCCAAAATGGTAACACTCGTCTTCTTGAAAGAATATTTGCCAAATTATATATATATATGTAAATAACCCTGAACTAGGCTCTTGTAAAAAGGGTCCTATTCTTTTAAATTTTGCTATATTACTCTTGACCTTTTAAAATTGTTTCAAAACTATTCTTGGGTAG

mRNA sequence

CACGAAACAACCTTCACTTTCCTCACAGACGCATAACAAAACCAGCTTTGAAGAAGAACAGCCTTCAGGATTCTGATTTCAATCGGATTTAGCTTCTAAAATCTCAGAGAGCAATTATGGAAGATTCATCCTCTCAATCCTTCTTCAGGAAGCATTGGGAAGGCTACAAGGAATTTTGGTCCGAGAGGTTCTCCATCATCGACAACTATTCTCCCTACATCCAGCGCCAAACCCGTCTTCCTCCCTGGTCTTCCTCCGATGTCGAGGAATTCATTGCTTCCGACCCCGTTCATGGCCCTGCTTTGAAGACTGCTCGAGAAGCTGTAAATTTTGGTCTTACAGGAAGTGTTGTTGGAGCTGTATCAACTGCAGGTGTTGCATGGAAATACTCAAGAAGTTTACATGGTGCTGGGCTGTCGTTCCTGGCAGGAGCTGCATTCGGTTGGACCTTCGGCCATGAGATTGCAAATCATTGGTATCAACTCTATAGGTTGGACACCATGGGTGCACAAGTTAAGTTTATGGAGTGGTGGAGAAACAAGAGTGAGGGAGGTTTTTAAAACTCTGATTTTGCAGTCGAAGCAGCAGCACACACTGCAGCTGCCATCTGAAATAAAAATGTAAGTGCAACTTTGTTGAAATACAATGGTTGATTGGTTTGTTTTGTGGTGAACTCTTCCGACCTCCCAAGTTTAGGAATGGACTATATACTTTTTTATCTTCTGGAAATGACATTCATTTGCAGTCATCTTTACCAAATACCTCCTATCCTGGGTGTGTGTTAGGGTCTAAAGCATGTCCAAAATGGTAACACTCGTCTTCTTGAAAGAATATTTGCCAAATTATATATATATATGTAAATAACCCTGAACTAGGCTCTTGTAAAAAGGGTCCTATTCTTTTAAATTTTGCTATATTACTCTTGACCTTTTAAAATTGTTTCAAAACTATTCTTGGGTAG

Coding sequence (CDS)

ATGGAAGATTCATCCTCTCAATCCTTCTTCAGGAAGCATTGGGAAGGCTACAAGGAATTTTGGTCCGAGAGGTTCTCCATCATCGACAACTATTCTCCCTACATCCAGCGCCAAACCCGTCTTCCTCCCTGGTCTTCCTCCGATGTCGAGGAATTCATTGCTTCCGACCCCGTTCATGGCCCTGCTTTGAAGACTGCTCGAGAAGCTGTAAATTTTGGTCTTACAGGAAGTGTTGTTGGAGCTGTATCAACTGCAGGTGTTGCATGGAAATACTCAAGAAGTTTACATGGTGCTGGGCTGTCGTTCCTGGCAGGAGCTGCATTCGGTTGGACCTTCGGCCATGAGATTGCAAATCATTGGTATCAACTCTATAGGTTGGACACCATGGGTGCACAAGTTAAGTTTATGGAGTGGTGGAGAAACAAGAGTGAGGGAGGTTTTTAA

Protein sequence

MEDSSSQSFFRKHWEGYKEFWSERFSIIDNYSPYIQRQTRLPPWSSSDVEEFIASDPVHGPALKTAREAVNFGLTGSVVGAVSTAGVAWKYSRSLHGAGLSFLAGAAFGWTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGGF

Homology

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BLAST of Bhi02G001226 vs. Swiss-Prot
Match: sp|Q941A6|SDH6_ARATH (Succinate dehydrogenase subunit 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH6 PE=1 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 4.2e-53
Identity = 96/139 (69.06%), Postives = 110/139 (79.14%), Query Frame = 0


Query: 6   SQSFFRKHWEGYKEFWSERFSIIDNYSPYIQRQTRLPPWSSSDVEEFIASDPVHGPALKT 65
           S+SF  K+W G K+FWS+R S  +NY+ + +R   LP WSSSDVEEFIASDPVHGP LKT
Sbjct: 4   SESFVGKNWNGLKDFWSDRLSFFENYTRFTKRDAPLPSWSSSDVEEFIASDPVHGPTLKT 63

Query: 66  AREAVNFGLTGSVVGAVSTAGVAWKYSRSLHGAGLSFLAGAAFGWTFGHEIANHWYQLYR 125
           AREAV FG+TG+ +GAVSTA  AWKYSRS HGA LSFL G  FGWTFG E+ANH  QLY+
Sbjct: 64  AREAVTFGVTGAALGAVSTAAFAWKYSRSPHGAALSFLGGGVFGWTFGQEVANHTLQLYK 123

Query: 126 LDTMGAQVKFMEWWRNKSE 145
           LDTM AQVKFMEWW  KS+
Sbjct: 124 LDTMAAQVKFMEWWERKSQ 142

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BLAST of Bhi02G001226 vs. Swiss-Prot
Match: sp|Q6ZCC4|SDH6_ORYSJ (Succinate dehydrogenase subunit 6, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH6 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-29
Identity = 61/134 (45.52%), Postives = 83/134 (61.94%), Query Frame = 0


Query: 12  KHWEGYKEFWSERFSIIDNYSPYIQRQTRLPPWSSSDVEEFIASDPVHGPALKTAREAVN 71
           +H EG K  W++ FS +D +     R   LP W+ +DV+EFIASDPV+GP LK  RE+  
Sbjct: 5   EHVEGIKAHWAKNFSFLDYFKKVYGRDKPLPKWTDADVDEFIASDPVYGPQLKAMRESRK 64

Query: 72  FGLTGSVVGAVSTAGVAWKYSRSLHGAGLSFLAGAAFGWTFGHEIANHWYQLYRLDTMGA 131
           F L G++VG     G+A KYS++ HG  L+   GA  G   G E+A HWYQLY+ D  GA
Sbjct: 65  FALGGALVGGAHLGGIALKYSKAPHGVVLATGFGAICGAVVGSEVAEHWYQLYKTDKQGA 124

Query: 132 QVKFMEWWRNKSEG 146
            ++F+ WW +K  G
Sbjct: 125 NLRFIYWWEDKVAG 138

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BLAST of Bhi02G001226 vs. TAIR10
Match: AT1G08480.1 (unknown protein)

HSP 1 Score: 208.8 bits (530), Expect = 2.3e-54
Identity = 96/139 (69.06%), Postives = 110/139 (79.14%), Query Frame = 0


Query: 6   SQSFFRKHWEGYKEFWSERFSIIDNYSPYIQRQTRLPPWSSSDVEEFIASDPVHGPALKT 65
           S+SF  K+W G K+FWS+R S  +NY+ + +R   LP WSSSDVEEFIASDPVHGP LKT
Sbjct: 4   SESFVGKNWNGLKDFWSDRLSFFENYTRFTKRDAPLPSWSSSDVEEFIASDPVHGPTLKT 63

Query: 66  AREAVNFGLTGSVVGAVSTAGVAWKYSRSLHGAGLSFLAGAAFGWTFGHEIANHWYQLYR 125
           AREAV FG+TG+ +GAVSTA  AWKYSRS HGA LSFL G  FGWTFG E+ANH  QLY+
Sbjct: 64  AREAVTFGVTGAALGAVSTAAFAWKYSRSPHGAALSFLGGGVFGWTFGQEVANHTLQLYK 123

Query: 126 LDTMGAQVKFMEWWRNKSE 145
           LDTM AQVKFMEWW  KS+
Sbjct: 124 LDTMAAQVKFMEWWERKSQ 142

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BLAST of Bhi02G001226 vs. TrEMBL
Match: tr|A0A1S3BP04|A0A1S3BP04_CUCME (succinate dehydrogenase subunit 6, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103491959 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 3.2e-74
Identity = 134/145 (92.41%), Postives = 138/145 (95.17%), Query Frame = 0


Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSIIDNYSPYIQRQTRLPPWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSI+DNYSPY+QR T LP WSSSDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60

Query: 61  PALKTAREAVNFGLTGSVVGAVSTAGVAWKYSRSLHGAGLSFLAGAAFGWTFGHEIANHW 120
           P LKTAREAVNFGLTGSV+GAVSTAGVAWKYS+SLHGAGLSFLAG AFGWTFG EIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120

Query: 121 YQLYRLDTMGAQVKFMEWWRNKSEG 146
           YQLYRLDTM AQVKFMEWWRNKSEG
Sbjct: 121 YQLYRLDTMAAQVKFMEWWRNKSEG 145

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BLAST of Bhi02G001226 vs. TrEMBL
Match: tr|A0A2N9FBI6|A0A2N9FBI6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16138 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 5.1e-64
Identity = 115/140 (82.14%), Postives = 124/140 (88.57%), Query Frame = 0


Query: 6   SQSFFRKHWEGYKEFWSERFSIIDNYSPYIQRQTRLPPWSSSDVEEFIASDPVHGPALKT 65
           S+SFFRKHWEGYKEFW+ERFS ++NYS ++ R   LP WS SDV+ FIASDPVHGP LKT
Sbjct: 14  SESFFRKHWEGYKEFWTERFSFLENYSRFVNRDKPLPSWSDSDVDHFIASDPVHGPTLKT 73

Query: 66  AREAVNFGLTGSVVGAVSTAGVAWKYSRSLHGAGLSFLAGAAFGWTFGHEIANHWYQLYR 125
           AREAVNFGLTG+V+GAVSTAGVAWKYSRSLHGAGLSFLAG  FGWTFGHEIANHW QLYR
Sbjct: 74  AREAVNFGLTGTVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGHEIANHWLQLYR 133

Query: 126 LDTMGAQVKFMEWWRNKSEG 146
           LDTM AQVKFMEWW  KSEG
Sbjct: 134 LDTMAAQVKFMEWWEKKSEG 153

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BLAST of Bhi02G001226 vs. TrEMBL
Match: tr|A0A2C9V092|A0A2C9V092_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G103800 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 6.7e-64
Identity = 116/140 (82.86%), Postives = 123/140 (87.86%), Query Frame = 0


Query: 6   SQSFFRKHWEGYKEFWSERFSIIDNYSPYIQRQTRLPPWSSSDVEEFIASDPVHGPALKT 65
           SQSFFRKHWEGYKEFW ERFS +DNYS +I+R   LP WS+SDVEEFIASDPVHGP LKT
Sbjct: 5   SQSFFRKHWEGYKEFWGERFSFLDNYSRFIKRDKPLPSWSASDVEEFIASDPVHGPTLKT 64

Query: 66  AREAVNFGLTGSVVGAVSTAGVAWKYSRSLHGAGLSFLAGAAFGWTFGHEIANHWYQLYR 125
           AREA  FGLTGS++GAVSTAGVAWKYSRSLHGAGLSFLAG  FGWTFG EIANHW QLYR
Sbjct: 65  AREAAQFGLTGSIIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWMQLYR 124

Query: 126 LDTMGAQVKFMEWWRNKSEG 146
           LDTM AQVKFMEWW NK +G
Sbjct: 125 LDTMAAQVKFMEWWENKCDG 144

[Close]

BLAST of Bhi02G001226 vs. TrEMBL
Match: tr|A0A2I4H6S2|A0A2I4H6S2_9ROSI (succinate dehydrogenase subunit 6, mitochondrial OS=Juglans regia OX=51240 GN=LOC109013999 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.0e-63
Identity = 114/139 (82.01%), Postives = 123/139 (88.49%), Query Frame = 0


Query: 7   QSFFRKHWEGYKEFWSERFSIIDNYSPYIQRQTRLPPWSSSDVEEFIASDPVHGPALKTA 66
           QSFFR+HWEGYKEFW+ERFS +DNYS +I+R   LP WSS DV+EFIASDPVHGP L+TA
Sbjct: 10  QSFFRRHWEGYKEFWAERFSFLDNYSRFIKRDKPLPSWSSFDVQEFIASDPVHGPTLQTA 69

Query: 67  REAVNFGLTGSVVGAVSTAGVAWKYSRSLHGAGLSFLAGAAFGWTFGHEIANHWYQLYRL 126
           REAVNFGLTGSV+GAVSTAGV WKYSRSLHGAGLSFLAG  FGWTFGHE+ANHW QLYRL
Sbjct: 70  REAVNFGLTGSVIGAVSTAGVTWKYSRSLHGAGLSFLAGGVFGWTFGHEVANHWLQLYRL 129

Query: 127 DTMGAQVKFMEWWRNKSEG 146
           DTM AQVKFMEWW  K EG
Sbjct: 130 DTMAAQVKFMEWWERKCEG 148

[Close]

BLAST of Bhi02G001226 vs. TrEMBL
Match: tr|A0A2P4IYT2|A0A2P4IYT2_QUESU (Succinate dehydrogenase subunit 6, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_63325 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 9.7e-63
Identity = 115/145 (79.31%), Postives = 129/145 (88.97%), Query Frame = 0


Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSIIDNYSPYIQRQTRLPPWSSSDVEEFIASDPVHG 60
           M +SSSQSFF+KH+EGYKEFW+ERFS ++NY+ ++QR+  LP WS SDVEEFIASDPV+G
Sbjct: 1   MGESSSQSFFKKHYEGYKEFWTERFSFLENYARFVQREKPLPSWSDSDVEEFIASDPVNG 60

Query: 61  PALKTAREAVNFGLTGSVVGAVSTAGVAWKYSRSLHGAGLSFLAGAAFGWTFGHEIANHW 120
             LKTAREAVNFGLTGSV+GAVSTAGVAWKYSRS+HGAGLSFLAG  FGWTFG E+ANHW
Sbjct: 61  FTLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSVHGAGLSFLAGGVFGWTFGQEVANHW 120

Query: 121 YQLYRLDTMGAQVKFMEWWRNKSEG 146
            QLYRLDTM AQVKFMEWW  KSEG
Sbjct: 121 LQLYRLDTMAAQVKFMEWWEKKSEG 145

[Close]

BLAST of Bhi02G001226 vs. NCBI nr
Match: XP_022927277.1 (succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita moschata] >XP_023531100.1 succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288.1 bits (736), Expect = 1.7e-74
Identity = 133/147 (90.48%), Postives = 140/147 (95.24%), Query Frame = 0


Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSIIDNYSPYIQRQTRLPPWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSI+DNYSP++QR+  LP WS SDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVQREKPLPSWSDSDVEEFIASDPVHG 60

Query: 61  PALKTAREAVNFGLTGSVVGAVSTAGVAWKYSRSLHGAGLSFLAGAAFGWTFGHEIANHW 120
           P LKTAREAVNFGLTGS++GAVSTAGVAWKYSRSLHGAGLSFLAG AFGWTFGHEIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSLIGAVSTAGVAWKYSRSLHGAGLSFLAGGAFGWTFGHEIANHW 120

Query: 121 YQLYRLDTMGAQVKFMEWWRNKSEGGF 148
           YQLYR+DTMGAQVKFMEWWRNKSEG F
Sbjct: 121 YQLYRVDTMGAQVKFMEWWRNKSEGRF 147

[Close]

BLAST of Bhi02G001226 vs. NCBI nr
Match: XP_008450314.1 (PREDICTED: succinate dehydrogenase subunit 6, mitochondrial [Cucumis melo])

HSP 1 Score: 286.6 bits (732), Expect = 4.9e-74
Identity = 134/145 (92.41%), Postives = 138/145 (95.17%), Query Frame = 0


Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSIIDNYSPYIQRQTRLPPWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSI+DNYSPY+QR T LP WSSSDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPYVQRPTPLPSWSSSDVEEFIASDPVHG 60

Query: 61  PALKTAREAVNFGLTGSVVGAVSTAGVAWKYSRSLHGAGLSFLAGAAFGWTFGHEIANHW 120
           P LKTAREAVNFGLTGSV+GAVSTAGVAWKYS+SLHGAGLSFLAG AFGWTFG EIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHW 120

Query: 121 YQLYRLDTMGAQVKFMEWWRNKSEG 146
           YQLYRLDTM AQVKFMEWWRNKSEG
Sbjct: 121 YQLYRLDTMAAQVKFMEWWRNKSEG 145

[Close]

BLAST of Bhi02G001226 vs. NCBI nr
Match: XP_011660175.1 (PREDICTED: succinate dehydrogenase subunit 6, mitochondrial [Cucumis sativus])

HSP 1 Score: 286.2 bits (731), Expect = 6.3e-74
Identity = 133/145 (91.72%), Postives = 138/145 (95.17%), Query Frame = 0


Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSIIDNYSPYIQRQTRLPPWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWS+RFSI+DNYSPY+QRQT LP WSSSDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSDRFSILDNYSPYVQRQTPLPSWSSSDVEEFIASDPVHG 60

Query: 61  PALKTAREAVNFGLTGSVVGAVSTAGVAWKYSRSLHGAGLSFLAGAAFGWTFGHEIANHW 120
           P LKTAREAVNFGLTGSV+GAVSTAGVAWKYSRSLHGAGLSFLAG  FGWTFG EIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHW 120

Query: 121 YQLYRLDTMGAQVKFMEWWRNKSEG 146
           YQLYR+DTM AQVKFMEWWRNKSEG
Sbjct: 121 YQLYRVDTMAAQVKFMEWWRNKSEG 145

[Close]

BLAST of Bhi02G001226 vs. NCBI nr
Match: XP_022153276.1 (succinate dehydrogenase subunit 6, mitochondrial [Momordica charantia])

HSP 1 Score: 284.6 bits (727), Expect = 1.8e-73
Identity = 131/147 (89.12%), Postives = 138/147 (93.88%), Query Frame = 0


Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSIIDNYSPYIQRQTRLPPWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSI+DNY+PY+QR+  LP WSSSDVE FIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYAPYVQREKPLPSWSSSDVEAFIASDPVHG 60

Query: 61  PALKTAREAVNFGLTGSVVGAVSTAGVAWKYSRSLHGAGLSFLAGAAFGWTFGHEIANHW 120
           P LKTAREAVNFGLTGSV+GAVSTAGVAWKYSRSLHGAGLSFLAG  FGWTFGHE+ANHW
Sbjct: 61  PTLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGHEVANHW 120

Query: 121 YQLYRLDTMGAQVKFMEWWRNKSEGGF 148
           YQLYRLDTM AQVKFMEWWRNK+EG F
Sbjct: 121 YQLYRLDTMAAQVKFMEWWRNKNEGRF 147

[Close]

BLAST of Bhi02G001226 vs. NCBI nr
Match: XP_022965868.1 (succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 284.3 bits (726), Expect = 2.4e-73
Identity = 131/144 (90.97%), Postives = 138/144 (95.83%), Query Frame = 0


Query: 1   MEDSSSQSFFRKHWEGYKEFWSERFSIIDNYSPYIQRQTRLPPWSSSDVEEFIASDPVHG 60
           MEDSSSQSFFRKHWEGYKEFWSERFSI+DNYSP++QR+  LP WS SDVEEFIASDPVHG
Sbjct: 1   MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVQREKPLPSWSDSDVEEFIASDPVHG 60

Query: 61  PALKTAREAVNFGLTGSVVGAVSTAGVAWKYSRSLHGAGLSFLAGAAFGWTFGHEIANHW 120
           P LKTAREAVNFGLTGS++GAVSTAGVAWKYSRSLHGAGLSFLAG AFGWTFGHEIANHW
Sbjct: 61  PVLKTAREAVNFGLTGSLIGAVSTAGVAWKYSRSLHGAGLSFLAGGAFGWTFGHEIANHW 120

Query: 121 YQLYRLDTMGAQVKFMEWWRNKSE 145
           YQLYR+DTMGAQVKFMEWWRNKSE
Sbjct: 121 YQLYRVDTMGAQVKFMEWWRNKSE 144

The following BLAST results are available for this feature:

BLAST of Bhi02G001226 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q941A6\|SDH6_ARATH	4.2e-53	69.06	Succinate dehydrogenase subunit 6, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
sp\|Q6ZCC4\|SDH6_ORYSJ	1.1e-29	45.52	Succinate dehydrogenase subunit 6, mitochondrial OS=Oryza sativa subsp. japonica...	[more]

BLAST of Bhi02G001226 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08480.1	2.3e-54	69.06	unknown protein	[more]

BLAST of Bhi02G001226 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BP04\|A0A1S3BP04_CUCME	3.2e-74	92.41	succinate dehydrogenase subunit 6, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A2N9FBI6\|A0A2N9FBI6_FAGSY	5.1e-64	82.14	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16138 PE=4 SV=1	[more]
tr\|A0A2C9V092\|A0A2C9V092_MANES	6.7e-64	82.86	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G103800 PE=4 SV=...	[more]
tr\|A0A2I4H6S2\|A0A2I4H6S2_9ROSI	2.0e-63	82.01	succinate dehydrogenase subunit 6, mitochondrial OS=Juglans regia OX=51240 GN=LO...	[more]
tr\|A0A2P4IYT2\|A0A2P4IYT2_QUESU	9.7e-63	79.31	Succinate dehydrogenase subunit 6, mitochondrial OS=Quercus suber OX=58331 GN=CF...	[more]

BLAST of Bhi02G001226 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927277.1	1.7e-74	90.48	succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita moschata] >XP_0...	[more]
XP_008450314.1	4.9e-74	92.41	PREDICTED: succinate dehydrogenase subunit 6, mitochondrial [Cucumis melo]	[more]
XP_011660175.1	6.3e-74	91.72	PREDICTED: succinate dehydrogenase subunit 6, mitochondrial [Cucumis sativus]	[more]
XP_022153276.1	1.8e-73	89.12	succinate dehydrogenase subunit 6, mitochondrial [Momordica charantia]	[more]
XP_022965868.1	2.4e-73	90.97	succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita maxima]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005749	mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)

Vocabulary: **INTERPRO**
Term	Definition
IPR034574	SDH6

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005749	mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
cellular_component	GO:0009536	plastid
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0043495	protein anchor
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi02M001226	Bhi02M001226	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR034574	Succinate dehydrogenase subunit 6, mitochondrial	PANTHER	PTHR36708	FAMILY NOT NAMED	coord: 7..144

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi02G001226	Csa1G629750	Cucumber (Chinese Long) v2	cuwgoB096
Bhi02G001226	MELO3C015091	Melon (DHL92) v3.5.1	mewgoB305
Bhi02G001226	ClCG03G012390	Watermelon (Charleston Gray)	wcgwgoB362
Bhi02G001226	CSPI01G31260	Wild cucumber (PI 183967)	cpiwgoB100
Bhi02G001226	gCucsa.355740.2	Cucumber (Gy14) v1	cgywgoB710
Bhi02G001226	CmoCh10G009170	Cucurbita moschata (Rifu)	cmowgoB0072
Bhi02G001226	Lsi06G006030	Bottle gourd (USVL1VR-Ls)	lsiwgoB520
Bhi02G001226	Cp4.1LG04g12560	Cucurbita pepo (Zucchini)	cpewgoB0882
Bhi02G001226	Cp4.1LG18g02000	Cucurbita pepo (Zucchini)	cpewgoB0468
Bhi02G001226	CsGy1G030430	Cucumber (Gy14) v2	cgybwgoB094
Bhi02G001226	MELO3C015091.2	Melon (DHL92) v3.6.1	medwgoB305
Bhi02G001226	Carg17847	Silver-seed gourd	carwgoB1135
Bhi02G001226	Carg25975	Silver-seed gourd	carwgoB1035
Bhi02G001226	CsaV3_1G043620	Cucumber (Chinese Long) v3	cucwgoB105
Bhi02G001226	Cla007336	Watermelon (97103) v1	wgowmB655
Bhi02G001226	Cla97C03G062720	Watermelon (97103) v2	wgowmbB630

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi02G001226	Cucurbita maxima (Rimu)	cmawgoB0078
Bhi02G001226	Cucurbita maxima (Rimu)	cmawgoB0166
Bhi02G001226	Cucurbita moschata (Rifu)	cmowgoB0159