CsGy1G013900 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G013900
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	senescence regulator (Protein of unknown function%2C DUF584)
Location	Chr1 : 9547556 .. 9548058 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACTGGTAAGAGTTACTTCTCTCGCTCTAAGTTCCGTTTTCTTTCCCCCGGTGACGGACCTGACCACCACCGTAACGACGCCGCTTTCGATTTCGATGAGTCCGACCTTTTCAACTCTCCCCACTCCGGAACCTCCCGGAGTTCCGTCGGCCGGCTTCCAAATCTCGAATCTCAAAGCGGATTTCCCCTGTCGACGTCGGAGACCGGAGCGTTACGACGGTTTCCGCCGCCTCTCTTCCGGTTAACATCCCTGATTGGTCGAAGATCCTTAGAAACGAGTATATCGACAACAGGAGAGATGACTTTGAGGATGAAGACGGCGACGACGAAGGCGATGAGGTCGAGGAAAAGCGATTTAGGGTTCCGCCACATGAATTTCTGGCGAAGACCAGGATTGCTTCGTTTTCGGTTCATGAAGGAATTGGAAGAACGTTGAAAGGGAGAGATCTGAGCAGAGTTCGAGATGCGATTTGGCAAAAAACTGGATTCGAAGATTGA

mRNA sequence

ATGGCAACTGGTAAGAGTTACTTCTCTCGCTCTAAGTTCCGTTTTCTTTCCCCCGGTGACGGACCTGACCACCACCGTAACGACGCCGCTTTCGATTTCGATGAGTCCGACCTTTTCAACTCTCCCCACTCCGGAACCTCCCGGAGTTCCGTCGGCCGGCTTCCAAATCTCGAATCTCAAAGCGGATTTCCCCTGTCGACGTCGGAGACCGGAGCGTTACGACGGAGAGATGACTTTGAGGATGAAGACGGCGACGACGAAGGCGATGAGGTCGAGGAAAAGCGATTTAGGGTTCCGCCACATGAATTTCTGGCGAAGACCAGGATTGCTTCGTTTTCGGTTCATGAAGGAATTGGAAGAACGTTGAAAGGGAGAGATCTGAGCAGAGTTCGAGATGCGATTTGGCAAAAAACTGGATTCGAAGATTGA

Coding sequence (CDS)

ATGGCAACTGGTAAGAGTTACTTCTCTCGCTCTAAGTTCCGTTTTCTTTCCCCCGGTGACGGACCTGACCACCACCGTAACGACGCCGCTTTCGATTTCGATGAGTCCGACCTTTTCAACTCTCCCCACTCCGGAACCTCCCGGAGTTCCGTCGGCCGGCTTCCAAATCTCGAATCTCAAAGCGGATTTCCCCTGTCGACGTCGGAGACCGGAGCGTTACGACGGAGAGATGACTTTGAGGATGAAGACGGCGACGACGAAGGCGATGAGGTCGAGGAAAAGCGATTTAGGGTTCCGCCACATGAATTTCTGGCGAAGACCAGGATTGCTTCGTTTTCGGTTCATGAAGGAATTGGAAGAACGTTGAAAGGGAGAGATCTGAGCAGAGTTCGAGATGCGATTTGGCAAAAAACTGGATTCGAAGATTGA

Protein sequence

MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSRSSVGRLPNLESQSGFPLSTSETGALRRRDDFEDEDGDDEGDEVEEKRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

Homology

[Close]

BLAST of CsGy1G013900 vs. NCBI nr
Match: XP_004139450.1 (PREDICTED: uncharacterized protein LOC101217269 [Cucumis sativus] >KGN64850.1 hypothetical protein Csa_1G132110 [Cucumis sativus])

HSP 1 Score: 200.7 bits (509), Expect = 3.4e-48
Identity = 112/167 (67.07%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSRS----------- 60
           MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTS             
Sbjct: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60

Query: 61  ------SVG-RLPNLESQSGFPLSTSETGAL-------RRRDDFEDEDGDDEGDEVEEKR 120
                  VG R     S +  P++  +   +        RRDDFED        EVEEKR
Sbjct: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDXXXXXXXXEVEEKR 120

Query: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 143
           FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 167

[Close]

BLAST of CsGy1G013900 vs. NCBI nr
Match: XP_008462513.1 (PREDICTED: uncharacterized protein LOC103500846 [Cucumis melo])

HSP 1 Score: 185.3 bits (469), Expect = 1.5e-43
Identity = 106/167 (63.47%), Postives = 112/167 (67.07%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSRS----------- 60
           MATGKSYFSRSKFRFL  GDGPDH R+DAAFDFDESDLFNSPHSGTS             
Sbjct: 1   MATGKSYFSRSKFRFLPAGDGPDHCRSDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60

Query: 61  ------SVG-RLPNLESQSGFPLSTSETGAL-------RRRDDFEDEDGDDEGDEVEEKR 120
                  VG R     S +  P++  +   +        RRDDFED          EEKR
Sbjct: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFEDXXXXXXXXXFEEKR 120

Query: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 143
           FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 167

[Close]

BLAST of CsGy1G013900 vs. NCBI nr
Match: XP_022970343.1 (uncharacterized protein LOC111469336 [Cucurbita maxima])

HSP 1 Score: 152.5 bits (384), Expect = 1.1e-33
Identity = 91/173 (52.60%), Postives = 105/173 (60.69%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTS---RSSVG----- 60
           MATG +YFSRSKFRFL   DGPDH R D+ F+ DESDLFNSP S  S   R SV      
Sbjct: 1   MATGNTYFSRSKFRFLPTADGPDHRRTDSVFELDESDLFNSPRSSASPEFRRSVSKSRIS 60

Query: 61  ----------RLPNLESQSGFPLSTSETGALRRRDDFED-EDGDDE------------GD 120
                     R     + +  P++  +   + R +  E+  DG               G 
Sbjct: 61  KRISAVDDEDRSVKTVTAASLPVNIPDWSKILRNEYIENRRDGFXXXXXXXXXXXXVGGC 120

Query: 121 EVEEKRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 143
           + E+ RFRVPPHEFLAKTRIASFSVHEG+GRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 DFEDGRFRVPPHEFLAKTRIASFSVHEGVGRTLKGRDLSRVRDAIWQKTGFED 173

[Close]

BLAST of CsGy1G013900 vs. NCBI nr
Match: XP_023519114.1 (uncharacterized protein LOC111782574 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 151.4 bits (381), Expect = 2.4e-33
Identity = 90/173 (52.02%), Postives = 104/173 (60.12%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTS---RSSVG----- 60
           MATG +YFSRSKFRFL   DGPDH R D+ F+ DESDLFNSP S  S   R SV      
Sbjct: 1   MATGNTYFSRSKFRFLPTADGPDHRRTDSVFELDESDLFNSPRSSASPEFRRSVSKSRIS 60

Query: 61  ----------RLPNLESQSGFPLSTSETGALRRRDDFED-EDG------------DDEGD 120
                     R     + +  P++  +   + R +  E+  DG                 
Sbjct: 61  KRISAVDDEDRSVKTVTAASLPVNIPDWSKILRNEYIENRRDGFXXXXXXXXXXXXXXXX 120

Query: 121 EVEEKRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 143
           + E+ RFRVPPHEFLAKTRIASFSVHEG+GRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 DFEDGRFRVPPHEFLAKTRIASFSVHEGVGRTLKGRDLSRVRDAIWQKTGFED 173

[Close]

BLAST of CsGy1G013900 vs. NCBI nr
Match: XP_022964829.1 (uncharacterized protein LOC111464817 [Cucurbita moschata])

HSP 1 Score: 150.2 bits (378), Expect = 5.3e-33
Identity = 91/173 (52.60%), Postives = 105/173 (60.69%), Query Frame = 0


Query: 1   MAT-GKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTS---RSSVG---- 60
           MAT G +YFSRSKFRFL   DGPDH R D+ F+ DESDLFNSPHS  S   R SV     
Sbjct: 1   MATGGNTYFSRSKFRFLPTADGPDHRRTDSVFELDESDLFNSPHSSASPEFRRSVSKSRI 60

Query: 61  -----------RLPNLESQSGFPLSTSETGALRRRDDFED-EDG-----------DDEGD 120
                      R     + +  P++  +   + R +  E+  DG                
Sbjct: 61  SKRISAVDDEDRSVKTVTAASLPVNIPDWSKILRNEYIENRRDGFXXXXXXXXXXXXXXX 120

Query: 121 EVEEKRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 143
           + E+ RFRVPPHEFLAKTRIASFSVHEG+GRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 DFEDGRFRVPPHEFLAKTRIASFSVHEGVGRTLKGRDLSRVRDAIWQKTGFED 173

[Close]

BLAST of CsGy1G013900 vs. TAIR10
Match: AT3G45210.1 (Protein of unknown function, DUF584)

HSP 1 Score: 106.3 bits (264), Expect = 1.6e-23
Identity = 66/151 (43.71%), Postives = 91/151 (60.26%), Query Frame = 0


Query: 2   ATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLF----NSPH------SGTSRSSV 61
           AT KSY+ R   RFL P D   +   D+ F+FDESDL+    +SP       +   +SS 
Sbjct: 4   ATRKSYYQRPSHRFL-PTDRTYNVTGDSEFEFDESDLYSNRSDSPEFRRKLITSNRKSSP 63

Query: 62  GRLPNLESQSGFPLSTSETGALRRRDDFEDEDGDDEGDEVEEKRFRVPPHEFLAKTRIAS 121
             +      S  P++      +  +++ +  + DD+G E      ++PPHE+LAKTR+AS
Sbjct: 64  ATVTTTTVASSLPMNVQNWSKILGKENRKSIENDDDGGE-----GKLPPHEYLAKTRMAS 123

Query: 122 FSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 143
           FSVHEGIGRTLKGRD+SRVR+AI +KTGF D
Sbjct: 124 FSVHEGIGRTLKGRDMSRVRNAILEKTGFLD 148

[Close]

BLAST of CsGy1G013900 vs. TAIR10
Match: AT5G60680.1 (Protein of unknown function, DUF584)

HSP 1 Score: 95.5 bits (236), Expect = 2.8e-20
Identity = 66/163 (40.49%), Postives = 85/163 (52.15%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTS------RSSV--- 60
           MATGKSY++R  +RFL          +D+  +FDESDLFN  HS +        SSV   
Sbjct: 1   MATGKSYYARPSYRFLGTDQPSYFTASDSGLEFDESDLFNPIHSDSPDFCRKISSSVRSG 60

Query: 61  -------GRLPNLESQSGFPLSTSETGALRR---RDDFEDEDGDDEGDEVEEKRFR--VP 120
                              P++  +   + R   RD+                     +P
Sbjct: 61  KXXXXXXXXXXXXXXXXXLPVNVPDWSKILRGEYRDNXXXXXXXXXXXXXXXXXXXXWLP 120

Query: 121 PHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 143
           PHEFLAKTR+ASFSVHEG+GRTLKGRDLSRVR+AI++K GF+D
Sbjct: 121 PHEFLAKTRMASFSVHEGVGRTLKGRDLSRVRNAIFEKFGFQD 163

[Close]

BLAST of CsGy1G013900 vs. TAIR10
Match: AT2G28400.1 (Protein of unknown function, DUF584)

HSP 1 Score: 87.4 bits (215), Expect = 7.6e-18
Identity = 64/166 (38.55%), Postives = 87/166 (52.41%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFN-----------------SPH 60
           MAT K Y+ R   RF +      H    + F+ DE DLFN                 S  
Sbjct: 1   MATSKCYYPRPSHRFFTT---DQHVTATSDFELDEWDLFNTGSDSSSSFSFSDLTITSGR 60

Query: 61  SGTSRSSVGRLPNLESQSGFPLSTSETGAL-----RRRDDFEDEDGDDEGDEV--EEKRF 120
           +GT+R   G   + ++ S  P++  +   +     RR+    +E+ + +GDE+   E   
Sbjct: 61  TGTNRQIHGGSDSGKAASSLPVNVPDWSKILGDESRRQRKISNEE-EVDGDEILCGEGTR 120

Query: 121 RVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 143
           RVPPHE LA  R+ASFSVHEG GRTLKGRDLSRVR+ I++  G ED
Sbjct: 121 RVPPHELLANRRMASFSVHEGAGRTLKGRDLSRVRNTIFKIRGIED 162

[Close]

BLAST of CsGy1G013900 vs. TAIR10
Match: AT4G04630.1 (Protein of unknown function, DUF584)

HSP 1 Score: 65.9 bits (159), Expect = 2.4e-11
Identity = 31/47 (65.96%), Postives = 40/47 (85.11%), Query Frame = 0


Query: 98  VPPHEF----LAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGF 141
           VPPHE+    LA+T+I+SFS+ EG+GRTLKGRDLS+VR+A+  KTGF
Sbjct: 120 VPPHEWVARKLARTQISSFSMCEGVGRTLKGRDLSKVRNAVLSKTGF 166

[Close]

BLAST of CsGy1G013900 vs. TAIR10
Match: AT4G21970.1 (Protein of unknown function, DUF584)

HSP 1 Score: 63.9 bits (154), Expect = 9.0e-11
Identity = 35/62 (56.45%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 83  DGDDEGDEVEEKRFRVPPHEF----LAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKT 141
           D DDEG         VPPHE     LA+T+I+SFS+ EGIGRTLKGRDLS+ R+A+  +T
Sbjct: 89  DDDDEGS-------MVPPHELVAKRLARTQISSFSMCEGIGRTLKGRDLSKTRNAVLTRT 143

[Close]

BLAST of CsGy1G013900 vs. TrEMBL
Match: tr|A0A0A0LSF7|A0A0A0LSF7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132110 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.2e-48
Identity = 112/167 (67.07%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSRS----------- 60
           MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTS             
Sbjct: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60

Query: 61  ------SVG-RLPNLESQSGFPLSTSETGAL-------RRRDDFEDEDGDDEGDEVEEKR 120
                  VG R     S +  P++  +   +        RRDDFED        EVEEKR
Sbjct: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDXXXXXXXXEVEEKR 120

Query: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 143
           FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 167

[Close]

BLAST of CsGy1G013900 vs. TrEMBL
Match: tr|A0A1S3CH53|A0A1S3CH53_CUCME (uncharacterized protein LOC103500846 OS=Cucumis melo OX=3656 GN=LOC103500846 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 9.7e-44
Identity = 106/167 (63.47%), Postives = 112/167 (67.07%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSRS----------- 60
           MATGKSYFSRSKFRFL  GDGPDH R+DAAFDFDESDLFNSPHSGTS             
Sbjct: 1   MATGKSYFSRSKFRFLPAGDGPDHCRSDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60

Query: 61  ------SVG-RLPNLESQSGFPLSTSETGAL-------RRRDDFEDEDGDDEGDEVEEKR 120
                  VG R     S +  P++  +   +        RRDDFED          EEKR
Sbjct: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFEDXXXXXXXXXFEEKR 120

Query: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 143
           FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 167

[Close]

BLAST of CsGy1G013900 vs. TrEMBL
Match: tr|A0A2R6PF02|A0A2R6PF02_ACTCH (Classical arabinogalactan protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc30164 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.6e-24
Identity = 81/172 (47.09%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGT-------SRSSVGR 60
           MA  KSYF+R+ +RFLS GD P    +D+ F+ DESD++NS  S +       + S V +
Sbjct: 1   MAASKSYFARANYRFLS-GDAP--VTSDSMFELDESDVWNSARSASPEFLKPAANSRVSK 60

Query: 61  LPNLESQSG----------FPLSTSETGALR-------RRDDFEDEDG--DDEGDEVEEK 120
                 + G           P++  +   +R       RR D  D DG  DDEGD     
Sbjct: 61  KQAASKRGGAAETGATAASLPVNIPDWSKIRKEEYKDSRRCDVGDSDGDCDDEGD----- 120

Query: 121 RFRVPPHEFLAK----TRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 143
             R+PPHEFLAK    TRIASFSVHEGIGRTLKGRDLSRVR+AIW+KTGF+D
Sbjct: 121 --RIPPHEFLAKQLARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFQD 162

[Close]

BLAST of CsGy1G013900 vs. TrEMBL
Match: tr|A0A078JGY6|A0A078JGY6_BRANA (BnaCnng49210D protein OS=Brassica napus OX=3708 GN=BnaCnng49210D PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-23
Identity = 71/160 (44.38%), Postives = 98/160 (61.25%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSP---------------HSG 60
           MATGKSY++R  +RFL   D   +  ND+ F+FDESDL++S                   
Sbjct: 1   MATGKSYYARPSYRFLGT-DQSYYAANDSGFEFDESDLYSSDSPDFRRKISKPVRSVKKS 60

Query: 61  TSRSSVGRLPNLESQSGFPLSTSETGALRR---RDDFEDEDGDDEGDEVEEKRFRVPPHE 120
           ++R S     +  + S  P++  +   + R   RD+      DD+GD ++    R+PPHE
Sbjct: 61  SNRPSTCGASSAAAASSLPVNVPDWSKILREEHRDNRRRSIVDDDGDWLDASGGRLPPHE 120

Query: 121 FLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 143
           FLAKTR+ASFSVHEG+GRTLKGRDLSRVR+AI++K GF+D
Sbjct: 121 FLAKTRMASFSVHEGLGRTLKGRDLSRVRNAIFEKIGFQD 159

[Close]

BLAST of CsGy1G013900 vs. TrEMBL
Match: tr|M4CE28|M4CE28_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.5e-23
Identity = 71/161 (44.10%), Postives = 98/161 (60.87%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHS---------------- 60
           MATGKSY++R   RFL   D P +   D+ F+FDESDL+++  S                
Sbjct: 1   MATGKSYYARPSHRFLGT-DQPYYAATDSGFEFDESDLYSASDSPDFRRKISKPVRSVKK 60

Query: 61  GTSRSSVGRLPNLESQSGFPLSTSETGALRR---RDDFEDEDGDDEGDEVEEKRFRVPPH 120
            ++R S     +  + S  P++  +   + R   RD+      DD+GD ++    R+PPH
Sbjct: 61  SSNRPSTCGASSAAAASSLPVNVPDWSKILREEHRDNRRRSIVDDDGDWLDASGGRLPPH 120

Query: 121 EFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 143
           EFLAKTR+ASFSVHEG+GRTLKGRDLSRVR+AI++K GF+D
Sbjct: 121 EFLAKTRMASFSVHEGVGRTLKGRDLSRVRNAIFEKIGFQD 160

The following BLAST results are available for this feature:

BLAST of CsGy1G013900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139450.1	3.4e-48	67.07	PREDICTED: uncharacterized protein LOC101217269 [Cucumis sativus] >KGN64850.1 hy...	[more]
XP_008462513.1	1.5e-43	63.47	PREDICTED: uncharacterized protein LOC103500846 [Cucumis melo]	[more]
XP_022970343.1	1.1e-33	52.60	uncharacterized protein LOC111469336 [Cucurbita maxima]	[more]
XP_023519114.1	2.4e-33	52.02	uncharacterized protein LOC111782574 [Cucurbita pepo subsp. pepo]	[more]
XP_022964829.1	5.3e-33	52.60	uncharacterized protein LOC111464817 [Cucurbita moschata]	[more]

BLAST of CsGy1G013900 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G45210.1	1.6e-23	43.71	Protein of unknown function, DUF584	[more]
AT5G60680.1	2.8e-20	40.49	Protein of unknown function, DUF584	[more]
AT2G28400.1	7.6e-18	38.55	Protein of unknown function, DUF584	[more]
AT4G04630.1	2.4e-11	65.96	Protein of unknown function, DUF584	[more]
AT4G21970.1	9.0e-11	56.45	Protein of unknown function, DUF584	[more]

BLAST of CsGy1G013900 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy1G013900 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LSF7\|A0A0A0LSF7_CUCSA	2.2e-48	67.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132110 PE=4 SV=1	[more]
tr\|A0A1S3CH53\|A0A1S3CH53_CUCME	9.7e-44	63.47	uncharacterized protein LOC103500846 OS=Cucumis melo OX=3656 GN=LOC103500846 PE=...	[more]
tr\|A0A2R6PF02\|A0A2R6PF02_ACTCH	8.6e-24	47.09	Classical arabinogalactan protein OS=Actinidia chinensis var. chinensis OX=15908...	[more]
tr\|A0A078JGY6\|A0A078JGY6_BRANA	1.1e-23	44.38	BnaCnng49210D protein OS=Brassica napus OX=3708 GN=BnaCnng49210D PE=4 SV=1	[more]
tr\|M4CE28\|M4CE28_BRARP	1.5e-23	44.10	Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007608	Senescence_reg_S40

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G013900.1	CsGy1G013900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 79..142 e-value: 5.6E-26 score: 92.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..97
None	No IPR available	PANTHER	PTHR33083:SF9	ARABIDOPSIS THALIANA GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MOK16-RELATED	coord: 59..142
None	No IPR available	PANTHER	PTHR33083	FAMILY NOT NAMED	coord: 59..142

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G013900	Cla001867	Watermelon (97103) v1	cgybwmB054
CsGy1G013900	Csa1G132110	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G013900	MELO3C004871	Melon (DHL92) v3.5.1	cgybmeB010
CsGy1G013900	ClCG01G013780	Watermelon (Charleston Gray)	cgybwcgB014
CsGy1G013900	CSPI01G13890	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G013900	CmaCh13G002570	Cucurbita maxima (Rimu)	cgybcmaB061
CsGy1G013900	CmaCh12G008150	Cucurbita maxima (Rimu)	cgybcmaB058
CsGy1G013900	CmoCh13G002630	Cucurbita moschata (Rifu)	cgybcmoB057
CsGy1G013900	Lsi03G000510	Bottle gourd (USVL1VR-Ls)	cgyblsiB041
CsGy1G013900	Cp4.1LG07g06740	Cucurbita pepo (Zucchini)	cgybcpeB142
CsGy1G013900	Cp4.1LG20g07370	Cucurbita pepo (Zucchini)	cgybcpeB082
CsGy1G013900	MELO3C004871.2	Melon (DHL92) v3.6.1	cgybmedB009
CsGy1G013900	CsaV3_1G014070	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G013900	Cla97C01G012760	Watermelon (97103) v2	cgybwmbB003
CsGy1G013900	Bhi08G000141	Wax gourd	cgybwgoB046
CsGy1G013900	Carg23706	Silver-seed gourd	carcgybB0180
CsGy1G013900	Carg03240	Silver-seed gourd	carcgybB0342

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G013900	Cucurbita moschata (Rifu)	cgybcmoB054