CmaCh12G008150 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh12G008150
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Senescence regulator
Location	Cma_Chr12 : 5960697 .. 5961185 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACTGGTAAGAGCTACTCCTCCCGCTCCAAGTTCCGCTTTCTTCCCGCTAGCGAAGTACCCAACCACCGCCGCAGTACTGGCTGCGGCGATTTCGTCTTCGAAATCGACGAATCCGACCTCTTCAACTCCCCGCGCGGCGACGGAGTTTCCAAAACGCGAATCTCCAAGCGGATATCGGCGAAGGTAGTGGACGCTAGAGACGGAAGCGTAACGACAGCGGCGGCGTTGCCGGTTAACATCCCGGACTGGTCGAAGATCCTGAGAAACGAGTACATCGAGAATCGGAGAGATAGGTTCGAGGAAGAGGCGAACTGCGGCGATGAGTTGGAGAAGGATCGATTTAGGATTCCGCCGCACGAGTTTGTGGCGAGGACGAGGATGGCGTCGTTTTCCGTTGAGGAAGGAATTGGAAGAACGTTGAAAGGGAGAGATTTGAGTAGAGTTCGAGATGCGATTTGGCTAAAAACTGGATTCGAAGATTGA

mRNA sequence

ATGGCGACTGGTAAGAGCTACTCCTCCCGCTCCAAGTTCCGCTTTCTTCCCGCTAGCGAAGTACCCAACCACCGCCGCAGTACTGGCTGCGGCGATTTCGTCTTCGAAATCGACGAATCCGACCTCTTCAACTCCCCGCGCGGCGACGGAGTTTCCAAAACGCGAATCTCCAAGCGGATATCGGCGAAGGTAGTGGACGCTAGAGACGGAAGCGTAACGACAGCGGCGGCGTTGCCGGTTAACATCCCGGACTGGTCGAAGATCCTGAGAAACGAGTACATCGAGAATCGGAGAGATAGGTTCGAGGAAGAGGCGAACTGCGGCGATGAGTTGGAGAAGGATCGATTTAGGATTCCGCCGCACGAGTTTGTGGCGAGGACGAGGATGGCGTCGTTTTCCGTTGAGGAAGGAATTGGAAGAACGTTGAAAGGGAGAGATTTGAGTAGAGTTCGAGATGCGATTTGGCTAAAAACTGGATTCGAAGATTGA

Coding sequence (CDS)

ATGGCGACTGGTAAGAGCTACTCCTCCCGCTCCAAGTTCCGCTTTCTTCCCGCTAGCGAAGTACCCAACCACCGCCGCAGTACTGGCTGCGGCGATTTCGTCTTCGAAATCGACGAATCCGACCTCTTCAACTCCCCGCGCGGCGACGGAGTTTCCAAAACGCGAATCTCCAAGCGGATATCGGCGAAGGTAGTGGACGCTAGAGACGGAAGCGTAACGACAGCGGCGGCGTTGCCGGTTAACATCCCGGACTGGTCGAAGATCCTGAGAAACGAGTACATCGAGAATCGGAGAGATAGGTTCGAGGAAGAGGCGAACTGCGGCGATGAGTTGGAGAAGGATCGATTTAGGATTCCGCCGCACGAGTTTGTGGCGAGGACGAGGATGGCGTCGTTTTCCGTTGAGGAAGGAATTGGAAGAACGTTGAAAGGGAGAGATTTGAGTAGAGTTCGAGATGCGATTTGGCTAAAAACTGGATTCGAAGATTGA

Protein sequence

MATGKSYSSRSKFRFLPASEVPNHRRSTGCGDFVFEIDESDLFNSPRGDGVSKTRISKRISAKVVDARDGSVTTAAALPVNIPDWSKILRNEYIENRRDRFEEEANCGDELEKDRFRIPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED

Homology

[Close]

BLAST of CmaCh12G008150 vs. TrEMBL
Match: A0A0A0LSF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132110 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.7e-51
Identity = 117/173 (67.63%), Postives = 131/173 (75.72%), Query Frame = 1


Query: 1   MATGKSYSSRSKFRFLPASEVPNHRRSTGCGDFVFEIDESDLFNSPRGDG-------VSK 60
           MATGKSY SRSKFRFL   + P+H R+    D  F+ DESDLFNSP            SK
Sbjct: 1   MATGKSYFSRSKFRFLSPGDGPDHHRN----DAAFDFDESDLFNSPHSGTSPEFRRPASK 60

Query: 61  TRISKRISAKVVDARDGSVTT--AAALPVNIPDWSKILRNEYIENRRDRFEEEANC--GD 120
           +RISKRIS   VD  D SVTT  AA+LPVNIPDWSKILRNEYI+NRRD FE+E     GD
Sbjct: 61  SRISKRISP--VDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDDEGD 120

Query: 121 ELEKDRFRIPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED 163
           E+E+ RFR+PPHEF+A+TR+ASFSV EGIGRTLKGRDLSRVRDAIW KTGFED
Sbjct: 121 EVEEKRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 167

[Close]

BLAST of CmaCh12G008150 vs. TrEMBL
Match: W9REP9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007649 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.9e-34
Identity = 94/182 (51.65%), Postives = 119/182 (65.38%), Query Frame = 1


Query: 1   MATGKSYSSRSKFRFLPASEVPNHRRSTGCG--DFVFEIDESDLFNSPRGDG------VS 60
           MAT KSY +R  +RFLP     +H   T        FE+DESD++NS R +       +S
Sbjct: 1   MATSKSYFARPNYRFLPGDRDYHHHHHTAVAADSAAFELDESDIYNSARSNSPEFRKPIS 60

Query: 61  KTR-ISKRISAKVVD---ARDGSVTTAAALPVNIPDWSKILRNEYIENRR----DRFEEE 120
            +R ISK+ S+K      A D +  TAA+LPVNIPDWSKILR+EY +NR     D  +++
Sbjct: 61  SSRLISKKASSKRSSGDPAVDLTGATAASLPVNIPDWSKILRDEYRDNRTRDSIDDDDDD 120

Query: 121 ANCGDELEKDRFRIPPHEFVAR----TRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGF 163
            N G + ++   R+PPHEF+AR    TR+ASFSV EGIGRTLKGRDLSRVR+AIW KTGF
Sbjct: 121 FNGGGDCDEG-VRVPPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 180

[Close]

BLAST of CmaCh12G008150 vs. TrEMBL
Match: A0A0A0KBD5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G141350 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 5.7e-34
Identity = 93/170 (54.71%), Postives = 116/170 (68.24%), Query Frame = 1


Query: 1   MATGKS-YSSRSKFRFLPASEVPNHRRSTGCGDFVFEIDESDLFNSPRGDGVSKTRISKR 60
           MATGKS Y  RS +RFLP  ++  H   T   DF FE++ESD++NS      S TRI+K+
Sbjct: 1   MATGKSCYGRRSSYRFLPG-DISGHHSFTS--DFSFELNESDIYNSG-STARSPTRIAKK 60

Query: 61  -ISAK--VVDARDGSVTTAAALPVNIPDWSKILRNEYIENRRDRFEEEANCGDELEKDRF 120
            +S+K  V     G    A++LPVNIPDWSKIL+ EY E R   + ++    DE E++  
Sbjct: 61  KVSSKRSVEVGGGGGGGGASSLPVNIPDWSKILKEEYREKRSLEYADDME-EDEEEEEEM 120

Query: 121 RIPPHEFVAR----TRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED 163
           R+PPHEF+AR    TR+ASFSV EGIGRTLKGRDLSRVR+AIW KTGFED
Sbjct: 121 RVPPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 165

[Close]

BLAST of CmaCh12G008150 vs. TrEMBL
Match: A0A124SHF2_CYNCS (Senescence regulator OS=Cynara cardunculus var. scolymus GN=Ccrd_012270 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 7.4e-34
Identity = 92/172 (53.49%), Postives = 112/172 (65.12%), Query Frame = 1


Query: 1   MATGKSYSSRSKFRFLPASEVPNHRRSTGCGDFVFEIDESDLFNSPRGDGVSKT----RI 60
           MA  +SY +R  + FL        R  +   D +FE+DESD++N      + KT    RI
Sbjct: 1   MAASESYFARPNYGFLSGE-----RNGSVGSDSMFELDESDVWNVSVSPELRKTVPSSRI 60

Query: 61  SKRISAKVVDARDGSVT-TAAALPVNIPDWSKILRNEYIENRR-----DRFEEEANCGDE 120
           SKR S+  V  + G V   A++LPVN+PDWSKIL+  Y ENRR     D F+++ NCG  
Sbjct: 61  SKRSSSVAV--KRGEVRGMASSLPVNVPDWSKILKENYTENRRRDSEDDDFDDDYNCGGF 120

Query: 121 LEKDRFRIPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED 163
              DR  IPPHEF+ARTRMASFSV EGIGRTLKGRDLSRVR+AIW KTGFED
Sbjct: 121 GSGDR--IPPHEFLARTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 163

[Close]

BLAST of CmaCh12G008150 vs. TrEMBL
Match: A0A022PSS7_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015289mg PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 9.6e-34
Identity = 86/171 (50.29%), Postives = 109/171 (63.74%), Query Frame = 1


Query: 1   MATGKSYSSRSKFRFLPASEVPNHRRSTGCGDFVFEIDESDLFNS-PRGDGV----SKTR 60
           MA  KSY +RS +RFLP        R+      +FE+DESD++NS PR        +  R
Sbjct: 1   MAASKSYFARSNYRFLPTD------RAVAADSVIFELDESDIWNSVPRSQSPDFRKASAR 60

Query: 61  ISKRISAKVVDARDGSVTTAAALPVNIPDWSKILRNEYIENRRDRFEEEANCGDELEKDR 120
           I+++ S+    A  G V  A +LPVN+PDWSKIL+ EY ENRR   +++    +E +   
Sbjct: 61  IARKPSSAAAAAASGRVDGAGSLPVNVPDWSKILKEEYRENRRTEIDDDY---EEEDGGG 120

Query: 121 FRIPPHEFVAR----TRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED 163
            RIPPHEF+AR    TR+ASFSV EG GRTLKGRDLSRVR +IW KTGFED
Sbjct: 121 IRIPPHEFLARQMARTRIASFSVHEGRGRTLKGRDLSRVRGSIWQKTGFED 162

[Close]

BLAST of CmaCh12G008150 vs. TAIR10
Match: AT5G60680.1 (AT5G60680.1 Protein of unknown function, DUF584)

HSP 1 Score: 144.1 bits (362), Expect = 7.8e-35
Identity = 84/169 (49.70%), Postives = 108/169 (63.91%), Query Frame = 1


Query: 1   MATGKSYSSRSKFRFLPASEVPNHRRSTGCGDFVFEIDESDLFNSPRGDGV-------SK 60
           MATGKSY +R  +RFL  ++ P++  ++  G    E DESDLFN    D         S 
Sbjct: 1   MATGKSYYARPSYRFL-GTDQPSYFTASDSG---LEFDESDLFNPIHSDSPDFCRKISSS 60

Query: 61  TRISKRISAKVVDARDGSVTTAAALPVNIPDWSKILRNEYIENRRDRFEEEANCGDELEK 120
            R  K+ S +   A   S   A++LPVN+PDWSKILR EY +NRR   E+  +  D+ E 
Sbjct: 61  VRSGKKSSNRPSAA--SSAAAASSLPVNVPDWSKILRGEYRDNRRRSIEDNDDDDDDNED 120

Query: 121 DRFRIPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED 163
               +PPHEF+A+TRMASFSV EG+GRTLKGRDLSRVR+AI+ K GF+D
Sbjct: 121 GGDWLPPHEFLAKTRMASFSVHEGVGRTLKGRDLSRVRNAIFEKFGFQD 163

[Close]

BLAST of CmaCh12G008150 vs. TAIR10
Match: AT3G45210.1 (AT3G45210.1 Protein of unknown function, DUF584)

HSP 1 Score: 116.7 bits (291), Expect = 1.3e-26
Identity = 74/161 (45.96%), Postives = 94/161 (58.39%), Query Frame = 1


Query: 2   ATGKSYSSRSKFRFLPASEVPNHRRSTGCGDFVFEIDESDLFNSPRGDGVSKTRISKRIS 61
           AT KSY  R   RFLP     N       GD  FE DESDL+++ R D     R     +
Sbjct: 4   ATRKSYYQRPSHRFLPTDRTYNVT-----GDSEFEFDESDLYSN-RSDSPEFRRKLITSN 63

Query: 62  AKVVDARDGSVTTAAALPVNIPDWSKILRNEYIENRRDRFEEEANCGDELEKDRFRIPPH 121
            K   A   + T A++LP+N+ +WSKIL  E     R   E + + G+       ++PPH
Sbjct: 64  RKSSPATVTTTTVASSLPMNVQNWSKILGKE----NRKSIENDDDGGEG------KLPPH 123

Query: 122 EFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED 163
           E++A+TRMASFSV EGIGRTLKGRD+SRVR+AI  KTGF D
Sbjct: 124 EYLAKTRMASFSVHEGIGRTLKGRDMSRVRNAILEKTGFLD 148

[Close]

BLAST of CmaCh12G008150 vs. TAIR10
Match: AT2G28400.1 (AT2G28400.1 Protein of unknown function, DUF584)

HSP 1 Score: 109.0 bits (271), Expect = 2.8e-24
Identity = 73/170 (42.94%), Postives = 93/170 (54.71%), Query Frame = 1


Query: 1   MATGKSYSSRSKFRFLPASEVPNHRRSTGCGDFVFEIDESDLFNSPRGDGVSKTRISKRI 60
           MAT K Y  R   RF    +       T   DF  E+DE DLFN+      S +     I
Sbjct: 1   MATSKCYYPRPSHRFFTTDQ-----HVTATSDF--ELDEWDLFNTGSDSSSSFSFSDLTI 60

Query: 61  SA------KVVDARDGSVTTAAALPVNIPDWSKILRNEYIENRRDRFEEEANCGDEL--E 120
           ++      + +     S   A++LPVN+PDWSKIL +E    R+   EEE + GDE+   
Sbjct: 61  TSGRTGTNRQIHGGSDSGKAASSLPVNVPDWSKILGDESRRQRKISNEEEVD-GDEILCG 120

Query: 121 KDRFRIPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED 163
           +   R+PPHE +A  RMASFSV EG GRTLKGRDLSRVR+ I+   G ED
Sbjct: 121 EGTRRVPPHELLANRRMASFSVHEGAGRTLKGRDLSRVRNTIFKIRGIED 162

[Close]

BLAST of CmaCh12G008150 vs. TAIR10
Match: AT5G03230.1 (AT5G03230.1 Protein of unknown function, DUF584)

HSP 1 Score: 108.2 bits (269), Expect = 4.7e-24
Identity = 62/143 (43.36%), Postives = 86/143 (60.14%), Query Frame = 1


Query: 34  VFEIDESDL-----------FNSPRGDGVSKTRISKRISAKVVDARDGSVTTAAALPVNI 93
           VFE DESD+           F++ R   +S+ R   R   K  D+ +  +T   +LPVNI
Sbjct: 27  VFEFDESDIHNLGDHQLPNSFDAKRSISISRLR---RKPTKTGDSGNREITKTGSLPVNI 86

Query: 94  PDWSKILRNEYIENR---RDRFEEEANCGDELEKDRFRIPPHEFVARTRMASFSVEEGIG 153
           PDWSKIL++EY  +     D  +++ +  D  +  R  IPPHE++AR R +SF+V EGIG
Sbjct: 87  PDWSKILKSEYRGHAIPDDDSDDDDEDDDDSNDGGRRMIPPHEYLARRRGSSFTVHEGIG 146

Query: 154 RTLKGRDLSRVRDAIWLKTGFED 163
            T KGRDL R+R+AIW K GF+D
Sbjct: 147 GTAKGRDLRRLRNAIWEKIGFQD 166

[Close]

BLAST of CmaCh12G008150 vs. TAIR10
Match: AT4G04630.1 (AT4G04630.1 Protein of unknown function, DUF584)

HSP 1 Score: 84.7 bits (208), Expect = 5.6e-17
Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = 1


Query: 67  ARDGSVTTAAALPVNIPDWSKILRNEYIENRRDRFEEEANCGDELEKDRFRIPPHEFVAR 126
           +++ S    ++ P+N+PDWSK+  +     R       A   D+ + D   +PPHE+VAR
Sbjct: 69  SKEVSGVKQSSAPMNVPDWSKVYGDSKSNRRSSHLHSHAADDDDEDDDGCMVPPHEWVAR 128

Query: 127 ----TRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGF 161
               T+++SFS+ EG+GRTLKGRDLS+VR+A+  KTGF
Sbjct: 129 KLARTQISSFSMCEGVGRTLKGRDLSKVRNAVLSKTGF 166

[Close]

BLAST of CmaCh12G008150 vs. NCBI nr
Match: gi|659071905|ref|XP_008462513.1| (PREDICTED: uncharacterized protein LOC103500846 [Cucumis melo])

HSP 1 Score: 216.5 bits (550), Expect = 3.5e-53
Identity = 121/173 (69.94%), Postives = 133/173 (76.88%), Query Frame = 1


Query: 1   MATGKSYSSRSKFRFLPASEVPNHRRSTGCGDFVFEIDESDLFNSPRGDG-------VSK 60
           MATGKSY SRSKFRFLPA + P+H RS    D  F+ DESDLFNSP            SK
Sbjct: 1   MATGKSYFSRSKFRFLPAGDGPDHCRS----DAAFDFDESDLFNSPHSGTSPEFRRPASK 60

Query: 61  TRISKRISAKVVDARDGSVTT--AAALPVNIPDWSKILRNEYIENRRDRFEEEA--NCGD 120
           +RISKRIS   VD  D SVTT  AA+LPVNIPDWSKILRNEYIENRRD FE+E   + GD
Sbjct: 61  SRISKRISP--VDVGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFEDEDGDDDGD 120

Query: 121 ELEKDRFRIPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED 163
           E E+ RFR+PPHEF+A+TR+ASFSV EGIGRTLKGRDLSRVRDAIW KTGFED
Sbjct: 121 EFEEKRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 167

[Close]

BLAST of CmaCh12G008150 vs. NCBI nr
Match: gi|449443369|ref|XP_004139450.1| (PREDICTED: uncharacterized protein LOC101217269 [Cucumis sativus])

HSP 1 Score: 210.3 bits (534), Expect = 2.5e-51
Identity = 117/173 (67.63%), Postives = 131/173 (75.72%), Query Frame = 1


Query: 1   MATGKSYSSRSKFRFLPASEVPNHRRSTGCGDFVFEIDESDLFNSPRGDG-------VSK 60
           MATGKSY SRSKFRFL   + P+H R+    D  F+ DESDLFNSP            SK
Sbjct: 1   MATGKSYFSRSKFRFLSPGDGPDHHRN----DAAFDFDESDLFNSPHSGTSPEFRRPASK 60

Query: 61  TRISKRISAKVVDARDGSVTT--AAALPVNIPDWSKILRNEYIENRRDRFEEEANC--GD 120
           +RISKRIS   VD  D SVTT  AA+LPVNIPDWSKILRNEYI+NRRD FE+E     GD
Sbjct: 61  SRISKRISP--VDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDDEGD 120

Query: 121 ELEKDRFRIPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED 163
           E+E+ RFR+PPHEF+A+TR+ASFSV EGIGRTLKGRDLSRVRDAIW KTGFED
Sbjct: 121 EVEEKRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 167

[Close]

BLAST of CmaCh12G008150 vs. NCBI nr
Match: gi|659127893|ref|XP_008463944.1| (PREDICTED: uncharacterized protein LOC103501949 [Cucumis melo])

HSP 1 Score: 162.2 bits (409), Expect = 7.8e-37
Identity = 92/167 (55.09%), Postives = 115/167 (68.86%), Query Frame = 1


Query: 1   MATGKSYSSRSKFRFLPASEVPNHRRSTGCGDFVFEIDESDLFNSPRGDGVSKTRI-SKR 60
           MATGKS   RS +RFL      +H   +   DF FE++ESD++NS  G   S TRI  K+
Sbjct: 1   MATGKSCYGRSNYRFLTGDISGHHHHHSFTSDFSFELNESDIYNS--GTARSPTRIPKKK 60

Query: 61  ISAKVVDARDGSVTTAAALPVNIPDWSKILRNEYIENRRDRFEEEANCGDELEKDRFRIP 120
           IS+K V+ + G    A++LPVNIPDWSKIL+ EY E R   + ++    DE E++  R+P
Sbjct: 61  ISSKRVEVQGGG--GASSLPVNIPDWSKILKEEYREKRSSEYADDME-DDEDEEEEMRVP 120

Query: 121 PHEFVAR----TRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED 163
           PHEF+AR    TR+ASFSV EGIGRTLKGRDLSRVR+AIW KTGFED
Sbjct: 121 PHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 162

[Close]

BLAST of CmaCh12G008150 vs. NCBI nr
Match: gi|470110621|ref|XP_004291575.1| (PREDICTED: uncharacterized protein LOC101299444 [Fragaria vesca subsp. vesca])

HSP 1 Score: 157.9 bits (398), Expect = 1.5e-35
Identity = 94/178 (52.81%), Postives = 113/178 (63.48%), Query Frame = 1


Query: 1   MATGKSYSSRSKFRFLPASEVPNHRRSTGCGDFVFEIDESDLFNSPRGD----------- 60
           MAT KSY +R  +R+LP     +H   T  GD  FE+DESD++N  R             
Sbjct: 1   MATSKSYYARPNYRYLPT----DHHHQTLGGDSAFELDESDIYNFARSSSPEYRKPAMSS 60

Query: 61  -GVSKTRISKRISAKVVDARDGSVTTAAALPVNIPDWSKILRNEYIENRRDRFEEEANCG 120
            G SK   S   S+K  DA D S  TAA+LPV IPDWSKILR+EY ENRR   +++ +  
Sbjct: 61  RGASKK--SSSASSKRSDAGDLSGGTAASLPVGIPDWSKILRDEYRENRRSDDDDDVD-E 120

Query: 121 DELEKDRFRIPPHEFVAR----TRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED 163
           DE      R+PPHEF+AR    TR+ASFSV EG+GRTLKGRDLSRVR+AIW KTGFED
Sbjct: 121 DEWSAGSVRVPPHEFLARQMARTRIASFSVHEGVGRTLKGRDLSRVRNAIWEKTGFED 171

[Close]

BLAST of CmaCh12G008150 vs. NCBI nr
Match: gi|703105189|ref|XP_010098187.1| (hypothetical protein L484_007649 [Morus notabilis])

HSP 1 Score: 153.7 bits (387), Expect = 2.8e-34
Identity = 94/182 (51.65%), Postives = 119/182 (65.38%), Query Frame = 1


Query: 1   MATGKSYSSRSKFRFLPASEVPNHRRSTGCG--DFVFEIDESDLFNSPRGDG------VS 60
           MAT KSY +R  +RFLP     +H   T        FE+DESD++NS R +       +S
Sbjct: 1   MATSKSYFARPNYRFLPGDRDYHHHHHTAVAADSAAFELDESDIYNSARSNSPEFRKPIS 60

Query: 61  KTR-ISKRISAKVVD---ARDGSVTTAAALPVNIPDWSKILRNEYIENRR----DRFEEE 120
            +R ISK+ S+K      A D +  TAA+LPVNIPDWSKILR+EY +NR     D  +++
Sbjct: 61  SSRLISKKASSKRSSGDPAVDLTGATAASLPVNIPDWSKILRDEYRDNRTRDSIDDDDDD 120

Query: 121 ANCGDELEKDRFRIPPHEFVAR----TRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGF 163
            N G + ++   R+PPHEF+AR    TR+ASFSV EGIGRTLKGRDLSRVR+AIW KTGF
Sbjct: 121 FNGGGDCDEG-VRVPPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 180

The following BLAST results are available for this feature:

BLAST of CmaCh12G008150 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh12G008150 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSF7_CUCSA	1.7e-51	67.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132110 PE=4 SV=1	[more]
W9REP9_9ROSA	1.9e-34	51.65	Uncharacterized protein OS=Morus notabilis GN=L484_007649 PE=4 SV=1	[more]
A0A0A0KBD5_CUCSA	5.7e-34	54.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G141350 PE=4 SV=1	[more]
A0A124SHF2_CYNCS	7.4e-34	53.49	Senescence regulator OS=Cynara cardunculus var. scolymus GN=Ccrd_012270 PE=4 SV=...	[more]
A0A022PSS7_ERYGU	9.6e-34	50.29	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015289mg PE=4 SV=1	[more]

BLAST of CmaCh12G008150 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60680.1	7.8e-35	49.70	Protein of unknown function, DUF584	[more]
AT3G45210.1	1.3e-26	45.96	Protein of unknown function, DUF584	[more]
AT2G28400.1	2.8e-24	42.94	Protein of unknown function, DUF584	[more]
AT5G03230.1	4.7e-24	43.36	Protein of unknown function, DUF584	[more]
AT4G04630.1	5.6e-17	42.86	Protein of unknown function, DUF584	[more]

BLAST of CmaCh12G008150 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659071905\|ref\|XP_008462513.1\|	3.5e-53	69.94	PREDICTED: uncharacterized protein LOC103500846 [Cucumis melo]	[more]
gi\|449443369\|ref\|XP_004139450.1\|	2.5e-51	67.63	PREDICTED: uncharacterized protein LOC101217269 [Cucumis sativus]	[more]
gi\|659127893\|ref\|XP_008463944.1\|	7.8e-37	55.09	PREDICTED: uncharacterized protein LOC103501949 [Cucumis melo]	[more]
gi\|470110621\|ref\|XP_004291575.1\|	1.5e-35	52.81	PREDICTED: uncharacterized protein LOC101299444 [Fragaria vesca subsp. vesca]	[more]
gi\|703105189\|ref\|XP_010098187.1\|	2.8e-34	51.65	hypothetical protein L484_007649 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007608	Senescence_reg_S40

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G008150.1	CmaCh12G008150.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 62..162 score: 6.9
None	No IPR available	PANTHER	PTHR33083	FAMILY NOT NAMED	coord: 31..162 score: 4.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh12G008150	Cucsa.200430	Cucumber (Gy14) v1	cgycmaB0593
CmaCh12G008150	Cla001867	Watermelon (97103) v1	cmawmB165
CmaCh12G008150	Csa1G132110	Cucumber (Chinese Long) v2	cmacuB163
CmaCh12G008150	MELO3C004871	Melon (DHL92) v3.5.1	cmameB148
CmaCh12G008150	ClCG01G013780	Watermelon (Charleston Gray)	cmawcgB154
CmaCh12G008150	CSPI01G13890	Wild cucumber (PI 183967)	cmacpiB163
CmaCh12G008150	CmoCh13G002630	Cucurbita moschata (Rifu)	cmacmoB179
CmaCh12G008150	Lsi03G000510	Bottle gourd (USVL1VR-Ls)	cmalsiB168
CmaCh12G008150	Cp4.1LG20g07370	Cucurbita pepo (Zucchini)	cmacpeB189
CmaCh12G008150	Cp4.1LG07g06740	Cucurbita pepo (Zucchini)	cmacpeB208
CmaCh12G008150	MELO3C004871.2	Melon (DHL92) v3.6.1	cmamedB161
CmaCh12G008150	CsaV3_1G014070	Cucumber (Chinese Long) v3	cmacucB0188
CmaCh12G008150	Cla97C01G012760	Watermelon (97103) v2	cmawmbB163
CmaCh12G008150	Bhi08G000141	Wax gourd	cmawgoB0220
CmaCh12G008150	CsGy1G013900	Cucumber (Gy14) v2	cgybcmaB058
CmaCh12G008150	Carg23706	Silver-seed gourd	carcmaB0222

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh12G008150	CmaCh13G002570	Cucurbita maxima (Rimu)	cmacmaB174

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh12G008150	Cucurbita moschata (Rifu)	cmacmoB177
CmaCh12G008150	Cucurbita pepo (Zucchini)	cmacpeB203