ClCG01G013780 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G013780
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOK16
Location	CG_Chr01 : 27556436 .. 27556945 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACTGGTAAGAGTTACTTCTCTCGCTCCAAGTTCCGCTTTCTTCCCGCCGGCGATGGACCCGACCACCGCCGTGGCGACGCCGTCTTCGATTTTGACGAGTCCGACCTCTTCAACCCCCCGCACTCCGGAACCTCCCCGGAGTTCCGTCGTTCGGCCACCAAAAAGCGAATCTCAAAGCGGATTTCGCCTGTCGACGCCGGAGACCGGAGCGTAACGACGGTGTCTGCAGCGTCTCTGCCGGTCAACATCCCTGACTGGTCGAAGATCCTGAGAAACGAGTATATCGAGAATCGGAGAGACGACTTCGACGACGACGAGGATGAAGACGACGGCGGCGGCCATGACTTCGAGGAAGGACGATTTAGGGTTCCGCCGCATGAATTTCTGGCGAAGACAAGAATCGCTTCGTTTTCGGTTCACGAAGGAATCGGAAGAACGTTGAAAGGGAGAGATCTGAGCAGAGTTCGAGATGCGATTTGGCAAAAAACTGGATTTGAAGATTGA

mRNA sequence

ATGGCGACTGGTAAGAGTTACTTCTCTCGCTCCAAGTTCCGCTTTCTTCCCGCCGGCGATGGACCCGACCACCGCCGTGGCGACGCCGTCTTCGATTTTGACGAGTCCGACCTCTTCAACCCCCCGCACTCCGGAACCTCCCCGGAGTTCCGTCGTTCGGCCACCAAAAAGCGAATCTCAAAGCGGATTTCGCCTGTCGACGCCGGAGACCGGAGCGTAACGACGGTGTCTGCAGCGTCTCTGCCGGTCAACATCCCTGACTGGTCGAAGATCCTGAGAAACGAGTATATCGAGAATCGGAGAGACGACTTCGACGACGACGAGGATGAAGACGACGGCGGCGGCCATGACTTCGAGGAAGGACGATTTAGGGTTCCGCCGCATGAATTTCTGGCGAAGACAAGAATCGCTTCGTTTTCGGTTCACGAAGGAATCGGAAGAACGTTGAAAGGGAGAGATCTGAGCAGAGTTCGAGATGCGATTTGGCAAAAAACTGGATTTGAAGATTGA

Coding sequence (CDS)

ATGGCGACTGGTAAGAGTTACTTCTCTCGCTCCAAGTTCCGCTTTCTTCCCGCCGGCGATGGACCCGACCACCGCCGTGGCGACGCCGTCTTCGATTTTGACGAGTCCGACCTCTTCAACCCCCCGCACTCCGGAACCTCCCCGGAGTTCCGTCGTTCGGCCACCAAAAAGCGAATCTCAAAGCGGATTTCGCCTGTCGACGCCGGAGACCGGAGCGTAACGACGGTGTCTGCAGCGTCTCTGCCGGTCAACATCCCTGACTGGTCGAAGATCCTGAGAAACGAGTATATCGAGAATCGGAGAGACGACTTCGACGACGACGAGGATGAAGACGACGGCGGCGGCCATGACTTCGAGGAAGGACGATTTAGGGTTCCGCCGCATGAATTTCTGGCGAAGACAAGAATCGCTTCGTTTTCGGTTCACGAAGGAATCGGAAGAACGTTGAAAGGGAGAGATCTGAGCAGAGTTCGAGATGCGATTTGGCAAAAAACTGGATTTGAAGATTGA

Protein sequence

MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRISKRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDDGGGHDFEEGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

Homology

[Close]

BLAST of ClCG01G013780 vs. TrEMBL
Match: A0A0A0LSF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132110 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 3.9e-78
Identity = 146/169 (86.39%), Postives = 154/169 (91.12%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MATGKSYFSRSKFRFL  GDGPDH R DA FDFDESDLFN PHSGTSPEFRR A+K RIS
Sbjct: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60

Query: 61  KRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDDGGGHDFEE 120
           KRISPVD GDRSVTTVSAASLPVNIPDWSKILRNEYI+NRRDDF+D++ +D+  G + EE
Sbjct: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDDE--GDEVEE 120

Query: 121 GRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
            RFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 KRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 167

[Close]

BLAST of ClCG01G013780 vs. TrEMBL
Match: W9REP9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007649 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.2e-44
Identity = 107/183 (58.47%), Postives = 126/183 (68.85%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAV------FDFDESDLFNPPHSGTSPEFRRSA 60
           MAT KSYF+R  +RFLP      H    AV      F+ DESD++N   S  SPEFR+  
Sbjct: 1   MATSKSYFARPNYRFLPGDRDYHHHHHTAVAADSAAFELDESDIYNSARSN-SPEFRKPI 60

Query: 61  TKKRI--SKRISPVDAGDRSV--TTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDE 120
           +  R+   K  S   +GD +V  T  +AASLPVNIPDWSKILR+EY +NR  D  DD+D+
Sbjct: 61  SSSRLISKKASSKRSSGDPAVDLTGATAASLPVNIPDWSKILRDEYRDNRTRDSIDDDDD 120

Query: 121 DDGGGHDFEEGRFRVPPHEFLA----KTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTG 170
           D  GG D +EG  RVPPHEFLA    +TRIASFSVHEGIGRTLKGRDLSRVR+AIW+KTG
Sbjct: 121 DFNGGGDCDEG-VRVPPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTG 180

[Close]

BLAST of ClCG01G013780 vs. TrEMBL
Match: A0A067LII0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05516 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 5.9e-42
Identity = 100/180 (55.56%), Postives = 124/180 (68.89%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHR---RGDAVFDFDESDLFNPPHS--GTSPEFRRSAT 60
           MAT KSYF+R  +RFL + D   H       + F+ DESD++N   +    SPEFR++  
Sbjct: 1   MATSKSYFARQNYRFL-SSDQSLHAPLTHDSSAFELDESDVYNNSVTTRSNSPEFRKAMA 60

Query: 61  KKRISKRISPVDAGDRSVTTVSA--ASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDDG 120
             R+ K+ + V A  R      A  +SLPVNIPDWSKIL++EY ENRR D DDD+D+ DG
Sbjct: 61  SSRLGKKSTAVAATTRRSDQAGATPSSLPVNIPDWSKILKDEYRENRRRDVDDDDDDVDG 120

Query: 121 GGHDFEEGRFRVPPHEFLAK----TRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
              D+ +G  RVPPHEFLAK    TRIASFSVHEG+GRTLKGRDLSRVR+AIW+KTGF+D
Sbjct: 121 --EDYFDGGSRVPPHEFLAKQMARTRIASFSVHEGVGRTLKGRDLSRVRNAIWEKTGFQD 177

[Close]

BLAST of ClCG01G013780 vs. TrEMBL
Match: F6GU08_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g02830 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 5.9e-42
Identity = 97/174 (55.75%), Postives = 123/174 (70.69%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MA+GKSY++R  +RFL           +AV + DESD+++  HS  SPEFR      R++
Sbjct: 1   MASGKSYYARPNYRFLSGDRDAPAITSEAVIELDESDIWSSSHSA-SPEFRNPVPSSRLA 60

Query: 61  KRISPV-DAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDDGGGHDFE 120
           K+ S   ++GDRS  TV   SLPVNIPDWSKILR +Y +NRR + DDD+D++D  G    
Sbjct: 61  KKPSKRGESGDRSTATVG--SLPVNIPDWSKILREDYRDNRRREADDDDDDEDDDG---- 120

Query: 121 EGRFRVPPHEFLAK----TRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           +   RVPPHEFLA+    TRIASFSV+EGIGRTLKGRDLSRVR+AIW+KTGF+D
Sbjct: 121 DSSSRVPPHEFLARQFARTRIASFSVYEGIGRTLKGRDLSRVRNAIWEKTGFQD 167

[Close]

BLAST of ClCG01G013780 vs. TrEMBL
Match: A5BAT1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001394 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.3e-41
Identity = 96/174 (55.17%), Postives = 123/174 (70.69%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MA+GKSY++R  +RFL           +AV + DE+D+++  HS  SPEFR      R++
Sbjct: 1   MASGKSYYARPNYRFLSGDRDAPAITSEAVIELDETDIWSSSHSA-SPEFRNPVPSSRLA 60

Query: 61  KRISPV-DAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDDGGGHDFE 120
           K+ S   ++GDRS  TV   SLPVNIPDWSKILR +Y +NRR + DDD+D++D  G    
Sbjct: 61  KKPSKRGESGDRSTATVG--SLPVNIPDWSKILREDYRDNRRREADDDDDDEDDDG---- 120

Query: 121 EGRFRVPPHEFLAK----TRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           +   RVPPHEFLA+    TRIASFSV+EGIGRTLKGRDLSRVR+AIW+KTGF+D
Sbjct: 121 DSSSRVPPHEFLARQFARTRIASFSVYEGIGRTLKGRDLSRVRNAIWEKTGFQD 167

[Close]

BLAST of ClCG01G013780 vs. TAIR10
Match: AT5G60680.1 (AT5G60680.1 Protein of unknown function, DUF584)

HSP 1 Score: 174.1 bits (440), Expect = 7.3e-44
Identity = 93/170 (54.71%), Postives = 120/170 (70.59%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEF-RRSATKKRI 60
           MATGKSY++R  +RFL           D+  +FDESDLFNP HS  SP+F R+ ++  R 
Sbjct: 1   MATGKSYYARPSYRFLGTDQPSYFTASDSGLEFDESDLFNPIHSD-SPDFCRKISSSVRS 60

Query: 61  SKRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDDGGGHDFE 120
            K+ S  +    + +  +A+SLPVN+PDWSKILR EY +NRR   +D++D+DD    D E
Sbjct: 61  GKKSS--NRPSAASSAAAASSLPVNVPDWSKILRGEYRDNRRRSIEDNDDDDD----DNE 120

Query: 121 EGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           +G   +PPHEFLAKTR+ASFSVHEG+GRTLKGRDLSRVR+AI++K GF+D
Sbjct: 121 DGGDWLPPHEFLAKTRMASFSVHEGVGRTLKGRDLSRVRNAIFEKFGFQD 163

[Close]

BLAST of ClCG01G013780 vs. TAIR10
Match: AT3G45210.1 (AT3G45210.1 Protein of unknown function, DUF584)

HSP 1 Score: 140.2 bits (352), Expect = 1.2e-33
Identity = 87/168 (51.79%), Postives = 109/168 (64.88%), Query Frame = 1


Query: 2   ATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRISK 61
           AT KSY+ R   RFLP  D   +  GD+ F+FDESDL++  +   SPEFRR       ++
Sbjct: 4   ATRKSYYQRPSHRFLPT-DRTYNVTGDSEFEFDESDLYS--NRSDSPEFRRKLITS--NR 63

Query: 62  RISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDDGGGHDFEEG 121
           + SP        TT  A+SLP+N+ +WSKIL  E   NR+      E++DDGG     EG
Sbjct: 64  KSSPATV----TTTTVASSLPMNVQNWSKILGKE---NRKSI----ENDDDGG-----EG 123

Query: 122 RFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           +  +PPHE+LAKTR+ASFSVHEGIGRTLKGRD+SRVR+AI +KTGF D
Sbjct: 124 K--LPPHEYLAKTRMASFSVHEGIGRTLKGRDMSRVRNAILEKTGFLD 148

[Close]

BLAST of ClCG01G013780 vs. TAIR10
Match: AT5G03230.1 (AT5G03230.1 Protein of unknown function, DUF584)

HSP 1 Score: 131.7 bits (330), Expect = 4.2e-31
Identity = 77/173 (44.51%), Postives = 107/173 (61.85%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEF--RRSATKKR 60
           MA+ K +F + K+ +    +       + VF+FDESD+ N         F  +RS +  R
Sbjct: 1   MASRKLFFVKPKYIY---PEPKPEMSDENVFEFDESDIHNLGDHQLPNSFDAKRSISISR 60

Query: 61  ISKRISPV-DAGDRSVTTVSAASLPVNIPDWSKILRNEYIENR-RDDFDDDEDEDDGGGH 120
           + ++ +   D+G+R +T     SLPVNIPDWSKIL++EY  +   DD  DD+DEDD   +
Sbjct: 61  LRRKPTKTGDSGNREIT--KTGSLPVNIPDWSKILKSEYRGHAIPDDDSDDDDEDDDDSN 120

Query: 121 DFEEGRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           D   GR  +PPHE+LA+ R +SF+VHEGIG T KGRDL R+R+AIW+K GF+D
Sbjct: 121 D--GGRRMIPPHEYLARRRGSSFTVHEGIGGTAKGRDLRRLRNAIWEKIGFQD 166

[Close]

BLAST of ClCG01G013780 vs. TAIR10
Match: AT2G28400.1 (AT2G28400.1 Protein of unknown function, DUF584)

HSP 1 Score: 117.5 bits (293), Expect = 8.1e-27
Identity = 77/169 (45.56%), Postives = 93/169 (55.03%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MAT K Y+ R   RF        H    + F+ DE DLFN   S +S  F  S       
Sbjct: 1   MATSKCYYPRPSHRFFTTDQ---HVTATSDFELDEWDLFNTG-SDSSSSFSFSDLTITSG 60

Query: 61  KRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDDGGGHDFEE 120
           +  +       S +  +A+SLPVN+PDWSKIL +E   +RR     +E+E DG      E
Sbjct: 61  RTGTNRQIHGGSDSGKAASSLPVNVPDWSKILGDE---SRRQRKISNEEEVDGDEILCGE 120

Query: 121 GRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
           G  RVPPHE LA  R+ASFSVHEG GRTLKGRDLSRVR+ I++  G ED
Sbjct: 121 GTRRVPPHELLANRRMASFSVHEGAGRTLKGRDLSRVRNTIFKIRGIED 162

[Close]

BLAST of ClCG01G013780 vs. TAIR10
Match: AT4G04630.1 (AT4G04630.1 Protein of unknown function, DUF584)

HSP 1 Score: 92.8 bits (229), Expect = 2.1e-19
Identity = 60/149 (40.27%), Postives = 83/149 (55.70%), Query Frame = 1


Query: 32  DFDESDLFNPPHSG--TSPEFR--RSATKKRISKRISPVDAG-DRSVTTVSAASLPVNIP 91
           +F E D+++    G  +SPE +  +S      S   SP +    + V+ V  +S P+N+P
Sbjct: 26  EFQEEDVWSVLREGETSSPEMKIPKSHFSSSSSSSSSPWNIRRSKEVSGVKQSSAPMNVP 85

Query: 92  DWSKILRNEYIENRRDDFD----DDEDEDDGGGHDFEEGRFRVPPHEF----LAKTRIAS 151
           DWSK+  +     R         DD+DEDD G          VPPHE+    LA+T+I+S
Sbjct: 86  DWSKVYGDSKSNRRSSHLHSHAADDDDEDDDG--------CMVPPHEWVARKLARTQISS 145

Query: 152 FSVHEGIGRTLKGRDLSRVRDAIWQKTGF 168
           FS+ EG+GRTLKGRDLS+VR+A+  KTGF
Sbjct: 146 FSMCEGVGRTLKGRDLSKVRNAVLSKTGF 166

[Close]

BLAST of ClCG01G013780 vs. NCBI nr
Match: gi|659071905|ref|XP_008462513.1| (PREDICTED: uncharacterized protein LOC103500846 [Cucumis melo])

HSP 1 Score: 308.1 bits (788), Expect = 9.2e-81
Identity = 151/169 (89.35%), Postives = 157/169 (92.90%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MATGKSYFSRSKFRFLPAGDGPDH R DA FDFDESDLFN PHSGTSPEFRR A+K RIS
Sbjct: 1   MATGKSYFSRSKFRFLPAGDGPDHCRSDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60

Query: 61  KRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDDGGGHDFEE 120
           KRISPVD GDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDF+D++ +DD  G +FEE
Sbjct: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFEDEDGDDD--GDEFEE 120

Query: 121 GRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
            RFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 KRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 167

[Close]

BLAST of ClCG01G013780 vs. NCBI nr
Match: gi|449443369|ref|XP_004139450.1| (PREDICTED: uncharacterized protein LOC101217269 [Cucumis sativus])

HSP 1 Score: 298.9 bits (764), Expect = 5.6e-78
Identity = 146/169 (86.39%), Postives = 154/169 (91.12%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFRRSATKKRIS 60
           MATGKSYFSRSKFRFL  GDGPDH R DA FDFDESDLFN PHSGTSPEFRR A+K RIS
Sbjct: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60

Query: 61  KRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDDGGGHDFEE 120
           KRISPVD GDRSVTTVSAASLPVNIPDWSKILRNEYI+NRRDDF+D++ +D+  G + EE
Sbjct: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDDE--GDEVEE 120

Query: 121 GRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
            RFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 KRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 167

[Close]

BLAST of ClCG01G013780 vs. NCBI nr
Match: gi|703105189|ref|XP_010098187.1| (hypothetical protein L484_007649 [Morus notabilis])

HSP 1 Score: 186.8 bits (473), Expect = 3.1e-44
Identity = 107/183 (58.47%), Postives = 126/183 (68.85%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAV------FDFDESDLFNPPHSGTSPEFRRSA 60
           MAT KSYF+R  +RFLP      H    AV      F+ DESD++N   S  SPEFR+  
Sbjct: 1   MATSKSYFARPNYRFLPGDRDYHHHHHTAVAADSAAFELDESDIYNSARSN-SPEFRKPI 60

Query: 61  TKKRI--SKRISPVDAGDRSV--TTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDE 120
           +  R+   K  S   +GD +V  T  +AASLPVNIPDWSKILR+EY +NR  D  DD+D+
Sbjct: 61  SSSRLISKKASSKRSSGDPAVDLTGATAASLPVNIPDWSKILRDEYRDNRTRDSIDDDDD 120

Query: 121 DDGGGHDFEEGRFRVPPHEFLA----KTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTG 170
           D  GG D +EG  RVPPHEFLA    +TRIASFSVHEGIGRTLKGRDLSRVR+AIW+KTG
Sbjct: 121 DFNGGGDCDEG-VRVPPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTG 180

[Close]

BLAST of ClCG01G013780 vs. NCBI nr
Match: gi|470110621|ref|XP_004291575.1| (PREDICTED: uncharacterized protein LOC101299444 [Fragaria vesca subsp. vesca])

HSP 1 Score: 184.9 bits (468), Expect = 1.2e-43
Identity = 105/179 (58.66%), Postives = 123/179 (68.72%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHRRGDAVFDFDESDLFNPPHSGTSPEFR------RSA 60
           MAT KSY++R  +R+LP         GD+ F+ DESD++N   S +SPE+R      R A
Sbjct: 1   MATSKSYYARPNYRYLPTDHHHQTLGGDSAFELDESDIYNFARS-SSPEYRKPAMSSRGA 60

Query: 61  TKKRISKRISPVDAGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDDGG 120
           +KK  S      DAGD S  T  AASLPV IPDWSKILR+EY ENRR D DDD DED+  
Sbjct: 61  SKKSSSASSKRSDAGDLSGGT--AASLPVGIPDWSKILRDEYRENRRSDDDDDVDEDE-- 120

Query: 121 GHDFEEGRFRVPPHEFLA----KTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
              +  G  RVPPHEFLA    +TRIASFSVHEG+GRTLKGRDLSRVR+AIW+KTGFED
Sbjct: 121 ---WSAGSVRVPPHEFLARQMARTRIASFSVHEGVGRTLKGRDLSRVRNAIWEKTGFED 171

[Close]

BLAST of ClCG01G013780 vs. NCBI nr
Match: gi|802551475|ref|XP_012064819.1| (PREDICTED: uncharacterized protein LOC105628090 [Jatropha curcas])

HSP 1 Score: 178.7 bits (452), Expect = 8.4e-42
Identity = 100/180 (55.56%), Postives = 124/180 (68.89%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLPAGDGPDHR---RGDAVFDFDESDLFNPPHS--GTSPEFRRSAT 60
           MAT KSYF+R  +RFL + D   H       + F+ DESD++N   +    SPEFR++  
Sbjct: 1   MATSKSYFARQNYRFL-SSDQSLHAPLTHDSSAFELDESDVYNNSVTTRSNSPEFRKAMA 60

Query: 61  KKRISKRISPVDAGDRSVTTVSA--ASLPVNIPDWSKILRNEYIENRRDDFDDDEDEDDG 120
             R+ K+ + V A  R      A  +SLPVNIPDWSKIL++EY ENRR D DDD+D+ DG
Sbjct: 61  SSRLGKKSTAVAATTRRSDQAGATPSSLPVNIPDWSKILKDEYRENRRRDVDDDDDDVDG 120

Query: 121 GGHDFEEGRFRVPPHEFLAK----TRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 170
              D+ +G  RVPPHEFLAK    TRIASFSVHEG+GRTLKGRDLSRVR+AIW+KTGF+D
Sbjct: 121 --EDYFDGGSRVPPHEFLAKQMARTRIASFSVHEGVGRTLKGRDLSRVRNAIWEKTGFQD 177

The following BLAST results are available for this feature:

BLAST of ClCG01G013780 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSF7_CUCSA	3.9e-78	86.39	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132110 PE=4 SV=1	[more]
W9REP9_9ROSA	2.2e-44	58.47	Uncharacterized protein OS=Morus notabilis GN=L484_007649 PE=4 SV=1	[more]
A0A067LII0_JATCU	5.9e-42	55.56	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05516 PE=4 SV=1	[more]
F6GU08_VITVI	5.9e-42	55.75	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g02830 PE=4 SV=...	[more]
A5BAT1_VITVI	1.3e-41	55.17	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001394 PE=4 SV=1	[more]

BLAST of ClCG01G013780 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60680.1	7.3e-44	54.71	Protein of unknown function, DUF584	[more]
AT3G45210.1	1.2e-33	51.79	Protein of unknown function, DUF584	[more]
AT5G03230.1	4.2e-31	44.51	Protein of unknown function, DUF584	[more]
AT2G28400.1	8.1e-27	45.56	Protein of unknown function, DUF584	[more]
AT4G04630.1	2.1e-19	40.27	Protein of unknown function, DUF584	[more]

BLAST of ClCG01G013780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659071905\|ref\|XP_008462513.1\|	9.2e-81	89.35	PREDICTED: uncharacterized protein LOC103500846 [Cucumis melo]	[more]
gi\|449443369\|ref\|XP_004139450.1\|	5.6e-78	86.39	PREDICTED: uncharacterized protein LOC101217269 [Cucumis sativus]	[more]
gi\|703105189\|ref\|XP_010098187.1\|	3.1e-44	58.47	hypothetical protein L484_007649 [Morus notabilis]	[more]
gi\|470110621\|ref\|XP_004291575.1\|	1.2e-43	58.66	PREDICTED: uncharacterized protein LOC101299444 [Fragaria vesca subsp. vesca]	[more]
gi\|802551475\|ref\|XP_012064819.1\|	8.4e-42	55.56	PREDICTED: uncharacterized protein LOC105628090 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007608	Senescence_reg_S40

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006486	protein glycosylation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008378	galactosyltransferase activity
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G013780.1	ClCG01G013780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 48..169 score: 2.8
None	No IPR available	PANTHER	PTHR33083	FAMILY NOT NAMED	coord: 7..169 score: 5.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G013780	Csa1G132110	Cucumber (Chinese Long) v2	cuwcgB014
ClCG01G013780	MELO3C004871	Melon (DHL92) v3.5.1	mewcgB131
ClCG01G013780	Cla001867	Watermelon (97103) v1	wcgwmB156
ClCG01G013780	Cla97C01G012760	Watermelon (97103) v2	wcgwmbB089
ClCG01G013780	Bhi08G000141	Wax gourd	wcgwgoB243
ClCG01G013780	CSPI01G13890	Wild cucumber (PI 183967)	cpiwcgB017
ClCG01G013780	Cucsa.200430	Cucumber (Gy14) v1	cgywcgB371
ClCG01G013780	CmaCh13G002570	Cucurbita maxima (Rimu)	cmawcgB181
ClCG01G013780	CmaCh12G008150	Cucurbita maxima (Rimu)	cmawcgB154
ClCG01G013780	CmoCh13G002630	Cucurbita moschata (Rifu)	cmowcgB172
ClCG01G013780	Lsi03G000510	Bottle gourd (USVL1VR-Ls)	lsiwcgB230
ClCG01G013780	Cp4.1LG20g07370	Cucurbita pepo (Zucchini)	cpewcgB455
ClCG01G013780	Cp4.1LG07g06740	Cucurbita pepo (Zucchini)	cpewcgB727
ClCG01G013780	CsGy1G013900	Cucumber (Gy14) v2	cgybwcgB014
ClCG01G013780	MELO3C004871.2	Melon (DHL92) v3.6.1	medwcgB127
ClCG01G013780	Carg23706	Silver-seed gourd	carwcgB0160
ClCG01G013780	CsaV3_1G014070	Cucumber (Chinese Long) v3	cucwcgB016

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G013780	Cucurbita moschata (Rifu)	cmowcgB142