CSPI01G13890 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAAGAGAGAGAGAGAAAGGAAAAAAGAAAAACAGGGAGTTTTTGGTAATTTTGGAGGAAAATCTTATCCGCTTCTTTATTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAACCCCCCAAAAACTTTTTAAAAGCCCTCAAAATCTCCATTTCTCTTTAACCATCTCAACTCCCAAAAAAAAAAAAATTCAAAATCTCTCCATTCCAATTCAACAAAATCCAAACACAATTCAGTGAGACGGACTTTTATTTTCTTTTTCTTTTTGTTTTTCTCTTTACCCTTTTGATGGCAACTGGTAAGAGTTACTTCTCTCGCTCTAAGTTCCGTTTTCTTTCCCCCGGCGACGGACCTGACCACCACCGTAACGACGCCGCTTTCGATTTCGACGAGTCCGACCTTTTCAACTCTCCCCACTCCGGAACCTCCCCGGAGTTCCGTCGGCCGGCTTCCAAATCTCGAATCTCAAAGCGGATTTCCCCTGTCGACGTCGGAGACCGGAGCGTTACGACGGTTTCCGCCGCCTCTCTTCCGGTTAACATCCCTGATTGGTCGAAGATCCTTAGAAACGAGTATATCGACAACAGGAGAGATGACTTTGAGGATGAAGACGGCGACGACGAAGGCGATGAGGTCGAGGAAAAGCGATTTAGGGTTCCGCCACATGAATTTCTGGCGAAGACCAGGATTGCTTCGTTTTCGGTTCATGAAGGAATTGGAAGAACGTTGAAAGGGAGAGATCTGAGCAGAGTTCGAGATGCGATTTGGCAAAAAACTGGATTCGAAGATTGATTGGATTGGATTGGATTGGGATTGAATTTGAACAAACACGAAGAACAATTAAACAAAAAAAAAAAACTCTCGGAATATTCCAATAGAATATACCAATTCCTTTCATGAGTAAGACTTTTCATCTCTCTTCCCCCAAAATTTTTGATCCTTCCCTCTTCCTCTCTTAATTTTTTCCCGTTTGGCCGCCCTATCTCGGCTGTGTTTCGATCGCTCCGATCATCGTTTTTTTTTTCACATCTGTAATTCGGAATATTTTGTATTTTGAATTTCACGAGAAGGATAGAAATATTTTATACTTTTTTTAATTAATCAATTCTTCAATATTGGTATTCTTTTTCTCTTATTCGTTCAAAATTATAATTTATTGGGCAATTTTGATCTGAAAAGATGCCCCTATTATTTTATTTTTATTTCTTAACAATTATAATAAATAACGTACACTTTTTTTAATTAAAGTATACTAAAATCATTTAATTAATCTCGCTTGTTTGTTTGGTTGATTTTGTTTAATTAAGAAGTCATCCGTTTAAATCTTCTACTTTGTATAATTAAATAATATAACAATAGTAATAATGAACAATTATTTAATATTACTTCTTTATTTTGA ATGGCAACTGGTAAGAGTTACTTCTCTCGCTCTAAGTTCCGTTTTCTTTCCCCCGGCGACGGACCTGACCACCACCGTAACGACGCCGCTTTCGATTTCGACGAGTCCGACCTTTTCAACTCTCCCCACTCCGGAACCTCCCCGGAGTTCCGTCGGCCGGCTTCCAAATCTCGAATCTCAAAGCGGATTTCCCCTGTCGACGTCGGAGACCGGAGCGTTACGACGGTTTCCGCCGCCTCTCTTCCGGTTAACATCCCTGATTGGTCGAAGATCCTTAGAAACGAGTATATCGACAACAGGAGAGATGACTTTGAGGATGAAGACGGCGACGACGAAGGCGATGAGGTCGAGGAAAAGCGATTTAGGGTTCCGCCACATGAATTTCTGGCGAAGACCAGGATTGCTTCGTTTTCGGTTCATGAAGGAATTGGAAGAACGTTGAAAGGGAGAGATCTGAGCAGAGTTCGAGATGCGATTTGGCAAAAAACTGGATTCGAAGATTGA ATGGCAACTGGTAAGAGTTACTTCTCTCGCTCTAAGTTCCGTTTTCTTTCCCCCGGCGACGGACCTGACCACCACCGTAACGACGCCGCTTTCGATTTCGACGAGTCCGACCTTTTCAACTCTCCCCACTCCGGAACCTCCCCGGAGTTCCGTCGGCCGGCTTCCAAATCTCGAATCTCAAAGCGGATTTCCCCTGTCGACGTCGGAGACCGGAGCGTTACGACGGTTTCCGCCGCCTCTCTTCCGGTTAACATCCCTGATTGGTCGAAGATCCTTAGAAACGAGTATATCGACAACAGGAGAGATGACTTTGAGGATGAAGACGGCGACGACGAAGGCGATGAGGTCGAGGAAAAGCGATTTAGGGTTCCGCCACATGAATTTCTGGCGAAGACCAGGATTGCTTCGTTTTCGGTTCATGAAGGAATTGGAAGAACGTTGAAAGGGAGAGATCTGAGCAGAGTTCGAGATGCGATTTGGCAAAAAACTGGATTCGAAGATTGA
BLAST of CSPI01G13890 vs. TrEMBL
Match: A0A0A0LSF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132110 PE=4 SV=1) HSP 1 Score: 337.4 bits (864), Expect = 9.8e-90 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1
BLAST of CSPI01G13890 vs. TrEMBL
Match: W9REP9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007649 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 1.8e-43 Identity = 111/183 (60.66%), Postives = 129/183 (70.49%), Query Frame = 1
BLAST of CSPI01G13890 vs. TrEMBL
Match: F6GU08_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g02830 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 8.4e-41 Identity = 99/172 (57.56%), Postives = 125/172 (72.67%), Query Frame = 1
BLAST of CSPI01G13890 vs. TrEMBL
Match: A5BAT1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001394 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 1.9e-40 Identity = 98/172 (56.98%), Postives = 125/172 (72.67%), Query Frame = 1
BLAST of CSPI01G13890 vs. TrEMBL
Match: M5WK89_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012473mg PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 3.2e-40 Identity = 103/180 (57.22%), Postives = 126/180 (70.00%), Query Frame = 1
BLAST of CSPI01G13890 vs. TAIR10
Match: AT5G60680.1 (AT5G60680.1 Protein of unknown function, DUF584) HSP 1 Score: 165.2 bits (417), Expect = 3.4e-41 Identity = 95/168 (56.55%), Postives = 118/168 (70.24%), Query Frame = 1
BLAST of CSPI01G13890 vs. TAIR10
Match: AT3G45210.1 (AT3G45210.1 Protein of unknown function, DUF584) HSP 1 Score: 133.7 bits (335), Expect = 1.1e-31 Identity = 84/166 (50.60%), Postives = 107/166 (64.46%), Query Frame = 1
BLAST of CSPI01G13890 vs. TAIR10
Match: AT5G03230.1 (AT5G03230.1 Protein of unknown function, DUF584) HSP 1 Score: 122.9 bits (307), Expect = 1.9e-28 Identity = 74/171 (43.27%), Postives = 106/171 (61.99%), Query Frame = 1
BLAST of CSPI01G13890 vs. TAIR10
Match: AT2G28400.1 (AT2G28400.1 Protein of unknown function, DUF584) HSP 1 Score: 109.0 bits (271), Expect = 2.9e-24 Identity = 75/169 (44.38%), Postives = 97/169 (57.40%), Query Frame = 1
BLAST of CSPI01G13890 vs. TAIR10
Match: AT4G04630.1 (AT4G04630.1 Protein of unknown function, DUF584) HSP 1 Score: 91.3 bits (225), Expect = 6.2e-19 Identity = 58/143 (40.56%), Postives = 86/143 (60.14%), Query Frame = 1
BLAST of CSPI01G13890 vs. NCBI nr
Match: gi|449443369|ref|XP_004139450.1| (PREDICTED: uncharacterized protein LOC101217269 [Cucumis sativus]) HSP 1 Score: 337.4 bits (864), Expect = 1.4e-89 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1
BLAST of CSPI01G13890 vs. NCBI nr
Match: gi|659071905|ref|XP_008462513.1| (PREDICTED: uncharacterized protein LOC103500846 [Cucumis melo]) HSP 1 Score: 321.6 bits (823), Expect = 8.0e-85 Identity = 160/167 (95.81%), Postives = 163/167 (97.60%), Query Frame = 1
BLAST of CSPI01G13890 vs. NCBI nr
Match: gi|703105189|ref|XP_010098187.1| (hypothetical protein L484_007649 [Morus notabilis]) HSP 1 Score: 183.7 bits (465), Expect = 2.6e-43 Identity = 111/183 (60.66%), Postives = 129/183 (70.49%), Query Frame = 1
BLAST of CSPI01G13890 vs. NCBI nr
Match: gi|1009115801|ref|XP_015874426.1| (PREDICTED: uncharacterized protein LOC107411364 [Ziziphus jujuba]) HSP 1 Score: 176.8 bits (447), Expect = 3.2e-41 Identity = 105/177 (59.32%), Postives = 125/177 (70.62%), Query Frame = 1
BLAST of CSPI01G13890 vs. NCBI nr
Match: gi|225435321|ref|XP_002285165.1| (PREDICTED: uncharacterized protein LOC100253658 [Vitis vinifera]) HSP 1 Score: 174.9 bits (442), Expect = 1.2e-40 Identity = 99/172 (57.56%), Postives = 125/172 (72.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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