Csa1G132110 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G132110
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOK16; contains IPR007608 (Senescence regulator)
Location	Chr1 : 9406775 .. 9407895 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGTTTTTCTCTTTACCCTTTTGATGGCAACTGGTAAGAGTTACTTCTCTCGCTCTAAGTTCCGTTTTCTTTCCCCCGGTGACGGACCTGACCACCACCGTAACGACGCCGCTTTCGATTTCGATGAGTCCGACCTTTTCAACTCTCCCCACTCCGGAACCTCCCCGGAGTTCCGTCGGCCGGCTTCCAAATCTCGAATCTCAAAGCGGATTTCCCCTGTCGACGTCGGAGACCGGAGCGTTACGACGGTTTCCGCCGCCTCTCTTCCGGTTAACATCCCTGATTGGTCGAAGATCCTTAGAAACGAGTATATCGACAACAGGAGAGATGACTTTGAGGATGAAGACGGCGACGACGAAGGCGATGAGGTCGAGGAAAAGCGATTTAGGGTTCCGCCACATGAATTTCTGGCGAAGACCAGGATTGCTTCGTTTTCGGTTCATGAAGGAATTGGAAGAACGTTGAAAGGGAGAGATCTGAGCAGAGTTCGAGATGCGATTTGGCAAAAAACTGGATTCGAAGATTGATTGGATTGGATTGGATTGGGATTGAATTTGAACAAACACGAAGAACAATTAAACAAAAAAAAAAACTCTCGGAATATTCCAATAGAATATACCAATTCATTTCATGAGTAAGACTTTTCATCTCTCTTCCCCCAAAATTTTTGATCCTTCCCTCTTCCTCTCTTAATTTTTTCCGCCGTTTGGCCGCCCTATCTCGGCTGTGTTTCGATCGCTCCGATCATCGTTTTTTTTTTCACATCTGTAATTCGGAATATTTTGTATTTTGAATTTCACGAGAAGGATAGAAATATTTTATACTTTTTTTAATTAATCAATTCTTCAATATTGGTATTCTTTTTCTCTTATTCGTTCAAAATTATAATTTATTGGGCAATTTTGATCTGAAAAGATGCCCCTATTATTTTATTTTTATTTCTTAACAATTATAATAAATAACGTACACTTTTCTTAATTAAAGTATACTAAAATCATTTAATTAATCTCGCTTGTTTGTTTGGTTGATTTTGTTTAATTAAGAAGTCATCCGTTTAAATCTTCTACTTTGTATAATTAAATAATGTAACAATTATTTAATATTACTTCTTTATTTTGA

mRNA sequence

ATGGCAACTGGTAAGAGTTACTTCTCTCGCTCTAAGTTCCGTTTTCTTTCCCCCGGTGACGGACCTGACCACCACCGTAACGACGCCGCTTTCGATTTCGATGAGTCCGACCTTTTCAACTCTCCCCACTCCGGAACCTCCCCGGAGTTCCGTCGGCCGGCTTCCAAATCTCGAATCTCAAAGCGGATTTCCCCTGTCGACGTCGGAGACCGGAGCGTTACGACGGTTTCCGCCGCCTCTCTTCCGGTTAACATCCCTGATTGGTCGAAGATCCTTAGAAACGAGTATATCGACAACAGGAGAGATGACTTTGAGGATGAAGACGGCGACGACGAAGGCGATGAGGTCGAGGAAAAGCGATTTAGGGTTCCGCCACATGAATTTCTGGCGAAGACCAGGATTGCTTCGTTTTCGGTTCATGAAGGAATTGGAAGAACGTTGAAAGGGAGAGATCTGAGCAGAGTTCGAGATGCGATTTGGCAAAAAACTGGATTCGAAGATTGA

Coding sequence (CDS)

ATGGCAACTGGTAAGAGTTACTTCTCTCGCTCTAAGTTCCGTTTTCTTTCCCCCGGTGACGGACCTGACCACCACCGTAACGACGCCGCTTTCGATTTCGATGAGTCCGACCTTTTCAACTCTCCCCACTCCGGAACCTCCCCGGAGTTCCGTCGGCCGGCTTCCAAATCTCGAATCTCAAAGCGGATTTCCCCTGTCGACGTCGGAGACCGGAGCGTTACGACGGTTTCCGCCGCCTCTCTTCCGGTTAACATCCCTGATTGGTCGAAGATCCTTAGAAACGAGTATATCGACAACAGGAGAGATGACTTTGAGGATGAAGACGGCGACGACGAAGGCGATGAGGTCGAGGAAAAGCGATTTAGGGTTCCGCCACATGAATTTCTGGCGAAGACCAGGATTGCTTCGTTTTCGGTTCATGAAGGAATTGGAAGAACGTTGAAAGGGAGAGATCTGAGCAGAGTTCGAGATGCGATTTGGCAAAAAACTGGATTCGAAGATTGA

Protein sequence

MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRISKRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDDEGDEVEEKRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED*

Homology

[Close]

BLAST of Csa1G132110 vs. TrEMBL
Match: A0A0A0LSF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132110 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 8.0e-92
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60
           MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS
Sbjct: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60

Query: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDDEGDEVEEKR 120
           KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDDEGDEVEEKR
Sbjct: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDDEGDEVEEKR 120

Query: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 168
           FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 167

[Close]

BLAST of Csa1G132110 vs. TrEMBL
Match: W9REP9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007649 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.5e-45
Identity = 111/183 (60.66%), Postives = 129/183 (70.49%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRN-------DAAFDFDESDLFNSPHSGTSPEFRRP 60
           MAT KSYF+R  +RFL PGD   HH +        AAF+ DESD++NS  S  SPEFR+P
Sbjct: 1   MATSKSYFARPNYRFL-PGDRDYHHHHHTAVAADSAAFELDESDIYNSARSN-SPEFRKP 60

Query: 61  ASKSRI--SKRISPVDVGDRSV--TTVSAASLPVNIPDWSKILRNEYIDNR-RDDFEDED 120
            S SR+   K  S    GD +V  T  +AASLPVNIPDWSKILR+EY DNR RD  +D+D
Sbjct: 61  ISSSRLISKKASSKRSSGDPAVDLTGATAASLPVNIPDWSKILRDEYRDNRTRDSIDDDD 120

Query: 121 GDDEGDEVEEKRFRVPPHEFLA----KTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTG 168
            D  G    ++  RVPPHEFLA    +TRIASFSVHEGIGRTLKGRDLSRVR+AIW+KTG
Sbjct: 121 DDFNGGGDCDEGVRVPPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTG 180

[Close]

BLAST of Csa1G132110 vs. TrEMBL
Match: F6GU08_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g02830 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 6.9e-43
Identity = 99/172 (57.56%), Postives = 125/172 (72.67%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60
           MA+GKSY++R  +RFLS         ++A  + DESD+++S HS  SPEFR P   SR++
Sbjct: 1   MASGKSYYARPNYRFLSGDRDAPAITSEAVIELDESDIWSSSHSA-SPEFRNPVPSSRLA 60

Query: 61  KRISPV-DVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDDEGDEVEEK 120
           K+ S   + GDRS  TV   SLPVNIPDWSKILR +Y DNRR + +D+D D++ D   + 
Sbjct: 61  KKPSKRGESGDRSTATVG--SLPVNIPDWSKILREDYRDNRRREADDDDDDEDDDG--DS 120

Query: 121 RFRVPPHEFLAK----TRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 168
             RVPPHEFLA+    TRIASFSV+EGIGRTLKGRDLSRVR+AIW+KTGF+D
Sbjct: 121 SSRVPPHEFLARQFARTRIASFSVYEGIGRTLKGRDLSRVRNAIWEKTGFQD 167

[Close]

BLAST of Csa1G132110 vs. TrEMBL
Match: A5BAT1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001394 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.5e-42
Identity = 98/172 (56.98%), Postives = 125/172 (72.67%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60
           MA+GKSY++R  +RFLS         ++A  + DE+D+++S HS  SPEFR P   SR++
Sbjct: 1   MASGKSYYARPNYRFLSGDRDAPAITSEAVIELDETDIWSSSHSA-SPEFRNPVPSSRLA 60

Query: 61  KRISPV-DVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDDEGDEVEEK 120
           K+ S   + GDRS  TV   SLPVNIPDWSKILR +Y DNRR + +D+D D++ D   + 
Sbjct: 61  KKPSKRGESGDRSTATVG--SLPVNIPDWSKILREDYRDNRRREADDDDDDEDDDG--DS 120

Query: 121 RFRVPPHEFLAK----TRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 168
             RVPPHEFLA+    TRIASFSV+EGIGRTLKGRDLSRVR+AIW+KTGF+D
Sbjct: 121 SSRVPPHEFLARQFARTRIASFSVYEGIGRTLKGRDLSRVRNAIWEKTGFQD 167

[Close]

BLAST of Csa1G132110 vs. TrEMBL
Match: M5WK89_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012473mg PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.5e-42
Identity = 103/180 (57.22%), Postives = 126/180 (70.00%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRN----DAAFDFDESDLFNSPHSGTSPEFRRPASK 60
           MAT KSY++R  +R+LS     DHH      D+AF+ DESD++N   S  SPEFR+P   
Sbjct: 1   MATSKSYYARPNYRYLSS----DHHHPTLAPDSAFELDESDIYNFARSN-SPEFRKPVPS 60

Query: 61  SRI-----SKRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDD 120
           SR+     ++R    D  DR+  T  AASLPV IPDWSKILR+EY +NR+ D +D+DGDD
Sbjct: 61  SRVVSASKNRRSEAADRSDRTGGT--AASLPVGIPDWSKILRDEYRENRKSD-DDDDGDD 120

Query: 121 EGDEVEEKRFRVPPHEFLA----KTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 168
           +     E   RVPPHEFLA    +TRIASFSVHEG+GRTLKGRDLSRVR+AIW+KTGFED
Sbjct: 121 D----VEGGVRVPPHEFLARQMARTRIASFSVHEGVGRTLKGRDLSRVRNAIWEKTGFED 168

[Close]

BLAST of Csa1G132110 vs. TAIR10
Match: AT5G60680.1 (AT5G60680.1 Protein of unknown function, DUF584)

HSP 1 Score: 171.8 bits (434), Expect = 3.6e-43
Identity = 95/168 (56.55%), Postives = 116/168 (69.05%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKS-RI 60
           MATGKSY++R  +RFL          +D+  +FDESDLFN  HS  SP+F R  S S R 
Sbjct: 1   MATGKSYYARPSYRFLGTDQPSYFTASDSGLEFDESDLFNPIHSD-SPDFCRKISSSVRS 60

Query: 61  SKRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDDEGDEVEEK 120
            K+ S  +    + +  +A+SLPVN+PDWSKILR EY DNRR   ED D DD  D+ E+ 
Sbjct: 61  GKKSS--NRPSAASSAAAASSLPVNVPDWSKILRGEYRDNRRRSIEDNDDDD--DDNEDG 120

Query: 121 RFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 168
              +PPHEFLAKTR+ASFSVHEG+GRTLKGRDLSRVR+AI++K GF+D
Sbjct: 121 GDWLPPHEFLAKTRMASFSVHEGVGRTLKGRDLSRVRNAIFEKFGFQD 163

[Close]

BLAST of Csa1G132110 vs. TAIR10
Match: AT3G45210.1 (AT3G45210.1 Protein of unknown function, DUF584)

HSP 1 Score: 138.7 bits (348), Expect = 3.4e-33
Identity = 84/166 (50.60%), Postives = 106/166 (63.86%), Query Frame = 1


Query: 2   ATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRISK 61
           AT KSY+ R   RFL P D   +   D+ F+FDESDL+++     SPEFRR    S  ++
Sbjct: 4   ATRKSYYQRPSHRFL-PTDRTYNVTGDSEFEFDESDLYSN--RSDSPEFRRKLITS--NR 63

Query: 62  RISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDDEGDEVEEKRF 121
           + SP  V     TT  A+SLP+N+ +WSKIL  E   NR+    D+DG +          
Sbjct: 64  KSSPATV----TTTTVASSLPMNVQNWSKILGKE---NRKSIENDDDGGEG--------- 123

Query: 122 RVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 168
           ++PPHE+LAKTR+ASFSVHEGIGRTLKGRD+SRVR+AI +KTGF D
Sbjct: 124 KLPPHEYLAKTRMASFSVHEGIGRTLKGRDMSRVRNAILEKTGFLD 148

[Close]

BLAST of Csa1G132110 vs. TAIR10
Match: AT5G03230.1 (AT5G03230.1 Protein of unknown function, DUF584)

HSP 1 Score: 129.4 bits (324), Expect = 2.1e-30
Identity = 74/171 (43.27%), Postives = 104/171 (60.82%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEF--RRPASKSR 60
           MA+ K +F + K+ +  P        ++  F+FDESD+ N         F  +R  S SR
Sbjct: 1   MASRKLFFVKPKYIYPEP---KPEMSDENVFEFDESDIHNLGDHQLPNSFDAKRSISISR 60

Query: 61  ISKRISPV-DVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNR-RDDFEDEDGDDEGDEV 120
           + ++ +   D G+R +T     SLPVNIPDWSKIL++EY  +   DD  D+D +D+ D  
Sbjct: 61  LRRKPTKTGDSGNREIT--KTGSLPVNIPDWSKILKSEYRGHAIPDDDSDDDDEDDDDSN 120

Query: 121 EEKRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 168
           +  R  +PPHE+LA+ R +SF+VHEGIG T KGRDL R+R+AIW+K GF+D
Sbjct: 121 DGGRRMIPPHEYLARRRGSSFTVHEGIGGTAKGRDLRRLRNAIWEKIGFQD 166

[Close]

BLAST of Csa1G132110 vs. TAIR10
Match: AT2G28400.1 (AT2G28400.1 Protein of unknown function, DUF584)

HSP 1 Score: 114.4 bits (285), Expect = 6.9e-26
Identity = 75/169 (44.38%), Postives = 95/169 (56.21%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60
           MAT K Y+ R   RF +      H    + F+ DE DLFN+  S +S  F          
Sbjct: 1   MATSKCYYPRPSHRFFTTDQ---HVTATSDFELDEWDLFNTG-SDSSSSFSFSDLTITSG 60

Query: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDDEGDEV--EE 120
           +  +   +   S +  +A+SLPVN+PDWSKIL +E    R+   E+E    +GDE+   E
Sbjct: 61  RTGTNRQIHGGSDSGKAASSLPVNVPDWSKILGDESRRQRKISNEEEV---DGDEILCGE 120

Query: 121 KRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 168
              RVPPHE LA  R+ASFSVHEG GRTLKGRDLSRVR+ I++  G ED
Sbjct: 121 GTRRVPPHELLANRRMASFSVHEGAGRTLKGRDLSRVRNTIFKIRGIED 162

[Close]

BLAST of Csa1G132110 vs. TAIR10
Match: AT4G04630.1 (AT4G04630.1 Protein of unknown function, DUF584)

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-20
Identity = 58/143 (40.56%), Postives = 84/143 (58.74%), Query Frame = 1


Query: 32  DFDESDLFNSPHSG--TSPEFRRPAS--KSRISKRISPVDVG-DRSVTTVSAASLPVNIP 91
           +F E D+++    G  +SPE + P S   S  S   SP ++   + V+ V  +S P+N+P
Sbjct: 26  EFQEEDVWSVLREGETSSPEMKIPKSHFSSSSSSSSSPWNIRRSKEVSGVKQSSAPMNVP 85

Query: 92  DWSKILRNEYIDNRRDDFEDEDGDDEGDEVEEKRFRVPPHEF----LAKTRIASFSVHEG 151
           DWSK+  +   + R         DD  D+ ++    VPPHE+    LA+T+I+SFS+ EG
Sbjct: 86  DWSKVYGDSKSNRRSSHLHSHAADD--DDEDDDGCMVPPHEWVARKLARTQISSFSMCEG 145

Query: 152 IGRTLKGRDLSRVRDAIWQKTGF 166
           +GRTLKGRDLS+VR+A+  KTGF
Sbjct: 146 VGRTLKGRDLSKVRNAVLSKTGF 166

[Close]

BLAST of Csa1G132110 vs. NCBI nr
Match: gi|449443369|ref|XP_004139450.1| (PREDICTED: uncharacterized protein LOC101217269 [Cucumis sativus])

HSP 1 Score: 344.4 bits (882), Expect = 1.2e-91
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60
           MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS
Sbjct: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60

Query: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDDEGDEVEEKR 120
           KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDDEGDEVEEKR
Sbjct: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDDEGDEVEEKR 120

Query: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 168
           FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 167

[Close]

BLAST of Csa1G132110 vs. NCBI nr
Match: gi|659071905|ref|XP_008462513.1| (PREDICTED: uncharacterized protein LOC103500846 [Cucumis melo])

HSP 1 Score: 328.6 bits (841), Expect = 6.6e-87
Identity = 160/167 (95.81%), Postives = 163/167 (97.60%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60
           MATGKSYFSRSKFRFL  GDGPDH R+DAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS
Sbjct: 1   MATGKSYFSRSKFRFLPAGDGPDHCRSDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60

Query: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDDEGDEVEEKR 120
           KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYI+NRRDDFEDEDGDD+GDE EEKR
Sbjct: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFEDEDGDDDGDEFEEKR 120

Query: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 168
           FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Sbjct: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 167

[Close]

BLAST of Csa1G132110 vs. NCBI nr
Match: gi|703105189|ref|XP_010098187.1| (hypothetical protein L484_007649 [Morus notabilis])

HSP 1 Score: 190.7 bits (483), Expect = 2.1e-45
Identity = 111/183 (60.66%), Postives = 129/183 (70.49%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRN-------DAAFDFDESDLFNSPHSGTSPEFRRP 60
           MAT KSYF+R  +RFL PGD   HH +        AAF+ DESD++NS  S  SPEFR+P
Sbjct: 1   MATSKSYFARPNYRFL-PGDRDYHHHHHTAVAADSAAFELDESDIYNSARSN-SPEFRKP 60

Query: 61  ASKSRI--SKRISPVDVGDRSV--TTVSAASLPVNIPDWSKILRNEYIDNR-RDDFEDED 120
            S SR+   K  S    GD +V  T  +AASLPVNIPDWSKILR+EY DNR RD  +D+D
Sbjct: 61  ISSSRLISKKASSKRSSGDPAVDLTGATAASLPVNIPDWSKILRDEYRDNRTRDSIDDDD 120

Query: 121 GDDEGDEVEEKRFRVPPHEFLA----KTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTG 168
            D  G    ++  RVPPHEFLA    +TRIASFSVHEGIGRTLKGRDLSRVR+AIW+KTG
Sbjct: 121 DDFNGGGDCDEGVRVPPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTG 180

[Close]

BLAST of Csa1G132110 vs. NCBI nr
Match: gi|1009115801|ref|XP_015874426.1| (PREDICTED: uncharacterized protein LOC107411364 [Ziziphus jujuba])

HSP 1 Score: 183.7 bits (465), Expect = 2.6e-43
Identity = 105/177 (59.32%), Postives = 125/177 (70.62%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHR----NDAAFDFDESDLFNSPHSGTSPEFRRPASK 60
           MAT KSYF+R  +RFL PGD  +HH      D+AF+ DESD++NS  S  SPE RRP   
Sbjct: 1   MATSKSYFARQNYRFL-PGDRDNHHHPSVITDSAFELDESDIYNSARSN-SPECRRPVPS 60

Query: 61  SRI-SKRISPVDVGDRSVTT-VSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDDEGD 120
           SR+ SK+ S     D S  T  + +SLPVNIPDWSKILR+EY DNRR D  D + D + D
Sbjct: 61  SRVVSKKSSSKRAPDSSDRTGATPSSLPVNIPDWSKILRDEYRDNRRRDSIDVNDDIDDD 120

Query: 121 EVEEKRFRVPPHEFLA----KTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 168
           +  E   RVPPHE LA    +TRIASFSVHEGIGRTLKGRDL+RVR+AIW+KTGF+D
Sbjct: 121 DDCEGGVRVPPHELLARQMARTRIASFSVHEGIGRTLKGRDLNRVRNAIWEKTGFQD 175

[Close]

BLAST of Csa1G132110 vs. NCBI nr
Match: gi|225435321|ref|XP_002285165.1| (PREDICTED: uncharacterized protein LOC100253658 [Vitis vinifera])

HSP 1 Score: 181.8 bits (460), Expect = 9.9e-43
Identity = 99/172 (57.56%), Postives = 125/172 (72.67%), Query Frame = 1


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60
           MA+GKSY++R  +RFLS         ++A  + DESD+++S HS  SPEFR P   SR++
Sbjct: 1   MASGKSYYARPNYRFLSGDRDAPAITSEAVIELDESDIWSSSHSA-SPEFRNPVPSSRLA 60

Query: 61  KRISPV-DVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDDEGDEVEEK 120
           K+ S   + GDRS  TV   SLPVNIPDWSKILR +Y DNRR + +D+D D++ D   + 
Sbjct: 61  KKPSKRGESGDRSTATVG--SLPVNIPDWSKILREDYRDNRRREADDDDDDEDDDG--DS 120

Query: 121 RFRVPPHEFLAK----TRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED 168
             RVPPHEFLA+    TRIASFSV+EGIGRTLKGRDLSRVR+AIW+KTGF+D
Sbjct: 121 SSRVPPHEFLARQFARTRIASFSVYEGIGRTLKGRDLSRVRNAIWEKTGFQD 167

The following BLAST results are available for this feature:

BLAST of Csa1G132110 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSF7_CUCSA	8.0e-92	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132110 PE=4 SV=1	[more]
W9REP9_9ROSA	1.5e-45	60.66	Uncharacterized protein OS=Morus notabilis GN=L484_007649 PE=4 SV=1	[more]
F6GU08_VITVI	6.9e-43	57.56	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g02830 PE=4 SV=...	[more]
A5BAT1_VITVI	1.5e-42	56.98	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001394 PE=4 SV=1	[more]
M5WK89_PRUPE	4.5e-42	57.22	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012473mg PE=4 SV=1	[more]

BLAST of Csa1G132110 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60680.1	3.6e-43	56.55	Protein of unknown function, DUF584	[more]
AT3G45210.1	3.4e-33	50.60	Protein of unknown function, DUF584	[more]
AT5G03230.1	2.1e-30	43.27	Protein of unknown function, DUF584	[more]
AT2G28400.1	6.9e-26	44.38	Protein of unknown function, DUF584	[more]
AT4G04630.1	1.1e-20	40.56	Protein of unknown function, DUF584	[more]

BLAST of Csa1G132110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443369\|ref\|XP_004139450.1\|	1.2e-91	100.00	PREDICTED: uncharacterized protein LOC101217269 [Cucumis sativus]	[more]
gi\|659071905\|ref\|XP_008462513.1\|	6.6e-87	95.81	PREDICTED: uncharacterized protein LOC103500846 [Cucumis melo]	[more]
gi\|703105189\|ref\|XP_010098187.1\|	2.1e-45	60.66	hypothetical protein L484_007649 [Morus notabilis]	[more]
gi\|1009115801\|ref\|XP_015874426.1\|	2.6e-43	59.32	PREDICTED: uncharacterized protein LOC107411364 [Ziziphus jujuba]	[more]
gi\|225435321\|ref\|XP_002285165.1\|	9.9e-43	57.56	PREDICTED: uncharacterized protein LOC100253658 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007608	Senescence_reg_S40

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU107344	cucumber EST collection version 3.0	transcribed_cluster
CU166766	cucumber EST collection version 3.0	transcribed_cluster
CU171524	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G132110.1	Csa1G132110.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU107344	CU107344	transcribed_cluster
CU171524	CU171524	transcribed_cluster
CU166766	CU166766	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 39..167 score: 6.2
None	No IPR available	PANTHER	PTHR33083	FAMILY NOT NAMED	coord: 7..167 score: 4.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G132110	Cla001867	Watermelon (97103) v1	cuwmB054
Csa1G132110	MELO3C004871	Melon (DHL92) v3.5.1	cumeB015
Csa1G132110	ClCG01G013780	Watermelon (Charleston Gray)	cuwcgB014
Csa1G132110	Lsi03G000510	Bottle gourd (USVL1VR-Ls)	culsiB044
Csa1G132110	MELO3C004871.2	Melon (DHL92) v3.6.1	cumedB010
Csa1G132110	Cla97C01G012760	Watermelon (97103) v2	cuwmbB002
Csa1G132110	Bhi08G000141	Wax gourd	cuwgoB049
Csa1G132110	CSPI01G13890	Wild cucumber (PI 183967)	cpicuB000
Csa1G132110	Cucsa.200430	Cucumber (Gy14) v1	cgycuB305
Csa1G132110	CmaCh13G002570	Cucurbita maxima (Rimu)	cmacuB203
Csa1G132110	CmaCh12G008150	Cucurbita maxima (Rimu)	cmacuB163
Csa1G132110	CmoCh13G002630	Cucurbita moschata (Rifu)	cmocuB188
Csa1G132110	Cp4.1LG20g07370	Cucurbita pepo (Zucchini)	cpecuB516
Csa1G132110	Cp4.1LG07g06740	Cucurbita pepo (Zucchini)	cpecuB805
Csa1G132110	CsGy1G013900	Cucumber (Gy14) v2	cgybcuB001
Csa1G132110	Carg03240	Silver-seed gourd	carcuB0360
Csa1G132110	Carg23706	Silver-seed gourd	carcuB0185

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G132110	Cucurbita moschata (Rifu)	cmocuB148