CsaV3_1G014070 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G014070
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Senescence regulator
Location	chr1 : 9568526 .. 9569788 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACTGGTAAGAGTTACTTCTCTCGCTCTAAGTTCCGTTTTCTTTCCCCCGGTGACGGACCTGACCACCACCGTAACGACGCCGCTTTCGATTTCGATGAGTCCGACCTTTTCAACTCTCCCCACTCCGGAACCTCCCCGGAGTTCCGTCGGCCGGCTTCCAAATCTCGAATCTCAAAGCGGATTTCCCCTGTCGACGTCGGAGACCGGAGCGTTACGACGGTTTCCGCCGCCTCTCTTCCGGTTAACATCCCTGATTGGTCGAAGATCCTTAGAAACGAGTATATCGACAACAGGAGAGATGACTTTGAGGATGAAGACGGCGACGACGAAGGCGATGAGGTCGAGGAAAAGCGATTTAGGGTTCCGCCACATGAATTTCTGGCGAAGACCAGGATTGCTTCGTTTTCGGTTCATGAAGGAATTGGAAGAACGTTGAAAGGGAGAGATCTGAGCAGAGTTCGAGATGCGATTTGGCAAAAAACTGGATTCGAAGATTGATTGGATTGGATTGGATTGGGATTGAATTTGAACAAACACGAAGAACAATTAAACAAAAAAAAAAACTCTCGGAATATTCCAATAGAATATACCAATTCATTTCATGAGTAAGACTTTTCATCTCTCTTCCCCCAAAATTTTTGATCCTTCCCTCTTCCTCTCTTAATTTTTTCCGCCGTTTGGCCGCCCTATCTCGGCTGTGTTTCGATCGCTCCGATCATCGTTTTTTTTTTCACATCTGTAATTCGGAATATTTTGTATTTTGAATTTCACGAGAAGGATAGAAATATTTTATACTTTTTTTAATTAATCAATTCTTCAATATTGGTATTCTTTTTCTCTTATTCGTTCAAAATTATAATTTATTGGGCAATTTTGATCTGAAAAGATGCCCCTATTATTTTATTTTTATTTCTTAACAATTATAATAAATAACGTACACTTTTCTTAATTAAAGTATACTAAAATCATTTAATTAATCTCGCTTGTTTGTTTGGTTGATTTTGTTTAATTAAGAAGTCATCCGTTTAAATCTTCTACTTTGTATAATTAAATAATGTAACAATTATTTAATATTACTTCTTTATTTTGATGAGTTTATGAGTTGGGCTATAAAGTTATTATTACAATGTATTCTGTATTTAATAACTTTTTTGGTATAAAATTGTATCTAATGTTAAAATTAATTTACATTGCATTTAATTCAATGGTGTACAACTGTGATCTCATAATGTTTAGTTGTCATAGAGTGAAATCTAG

mRNA sequence

ATGGCAACTGGTAAGAGTTACTTCTCTCGCTCTAAGTTCCGTTTTCTTTCCCCCGGTGACGGACCTGACCACCACCGTAACGACGCCGCTTTCGATTTCGATGAGTCCGACCTTTTCAACTCTCCCCACTCCGGAACCTCCCCGGAGTTCCGTCGGCCGGCTTCCAAATCTCGAATCTCAAAGCGGATTTCCCCTGTCGACGTCGGAGACCGGAGCGTTACGACGGTTTCCGCCGCCTCTCTTCCGGTTAACATCCCTGATTGGTCGAAGATCCTTAGAAACGAGTATATCGACAACAGGAGAGATGACTTTGAGGATGAAGACGGCGACGACGAAGGCGATGAGGTCGAGGAAAAGCGATTTAGGGTTCCGCCACATGAATTTCTGGCGAAGACCAGGATTGCTTCGTTTTCGGTTCATGAAGGAATTGGAAGAACGTTGAAAGGGAGAGATCTGAGCAGAAGTGAAATCTAG

Coding sequence (CDS)

ATGGCAACTGGTAAGAGTTACTTCTCTCGCTCTAAGTTCCGTTTTCTTTCCCCCGGTGACGGACCTGACCACCACCGTAACGACGCCGCTTTCGATTTCGATGAGTCCGACCTTTTCAACTCTCCCCACTCCGGAACCTCCCCGGAGTTCCGTCGGCCGGCTTCCAAATCTCGAATCTCAAAGCGGATTTCCCCTGTCGACGTCGGAGACCGGAGCGTTACGACGGTTTCCGCCGCCTCTCTTCCGGTTAACATCCCTGATTGGTCGAAGATCCTTAGAAACGAGTATATCGACAACAGGAGAGATGACTTTGAGGATGAAGACGGCGACGACGAAGGCGATGAGGTCGAGGAAAAGCGATTTAGGGTTCCGCCACATGAATTTCTGGCGAAGACCAGGATTGCTTCGTTTTCGGTTCATGAAGGAATTGGAAGAACGTTGAAAGGGAGAGATCTGAGCAGAAGTGAAATCTAG

Protein sequence

MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRISKRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDEDGDDEGDEVEEKRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRSEI

Homology

[Close]

BLAST of CsaV3_1G014070 vs. NCBI nr
Match: XP_004139450.1 (PREDICTED: uncharacterized protein LOC101217269 [Cucumis sativus] >KGN64850.1 hypothetical protein Csa_1G132110 [Cucumis sativus])

HSP 1 Score: 291.6 bits (745), Expect = 1.6e-75
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60
           MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS
Sbjct: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60

Query: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDXXXXXXXXEVEEKR 120
           KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDXXXXXXXXEVEEKR
Sbjct: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDXXXXXXXXEVEEKR 120

Query: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSR 155
           FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSR
Sbjct: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSR 154

[Close]

BLAST of CsaV3_1G014070 vs. NCBI nr
Match: XP_008462513.1 (PREDICTED: uncharacterized protein LOC103500846 [Cucumis melo])

HSP 1 Score: 274.6 bits (701), Expect = 2.1e-70
Identity = 147/154 (95.45%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60
           MATGKSYFSRSKFRFL  GDGPDH R+DAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS
Sbjct: 1   MATGKSYFSRSKFRFLPAGDGPDHCRSDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60

Query: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDXXXXXXXXEVEEKR 120
           KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYI+NRRDDFEDXXXXXXXX  EEKR
Sbjct: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFEDXXXXXXXXXFEEKR 120

Query: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSR 155
           FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSR
Sbjct: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSR 154

[Close]

BLAST of CsaV3_1G014070 vs. NCBI nr
Match: XP_022970343.1 (uncharacterized protein LOC111469336 [Cucurbita maxima])

HSP 1 Score: 221.9 bits (564), Expect = 1.6e-54
Identity = 120/160 (75.00%), Postives = 128/160 (80.00%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60
           MATG +YFSRSKFRFL   DGPDH R D+ F+ DESDLFNSP S  SPEFRR  SKSRIS
Sbjct: 1   MATGNTYFSRSKFRFLPTADGPDHRRTDSVFELDESDLFNSPRSSASPEFRRSVSKSRIS 60

Query: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDF------EDXXXXXXXX 120
           KRIS VD  DRSV TV+AASLPVNIPDWSKILRNEYI+NRRD F        XXXX    
Sbjct: 61  KRISAVDDEDRSVKTVTAASLPVNIPDWSKILRNEYIENRRDGFXXXXXXXXXXXXVGGC 120

Query: 121 EVEEKRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSR 155
           + E+ RFRVPPHEFLAKTRIASFSVHEG+GRTLKGRDLSR
Sbjct: 121 DFEDGRFRVPPHEFLAKTRIASFSVHEGVGRTLKGRDLSR 160

[Close]

BLAST of CsaV3_1G014070 vs. NCBI nr
Match: XP_023519114.1 (uncharacterized protein LOC111782574 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.9 bits (564), Expect = 1.6e-54
Identity = 124/160 (77.50%), Postives = 132/160 (82.50%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60
           MATG +YFSRSKFRFL   DGPDH R D+ F+ DESDLFNSP S  SPEFRR  SKSRIS
Sbjct: 1   MATGNTYFSRSKFRFLPTADGPDHRRTDSVFELDESDLFNSPRSSASPEFRRSVSKSRIS 60

Query: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDF------EDXXXXXXXX 120
           KRIS VD  DRSV TV+AASLPVNIPDWSKILRNEYI+NRRD F        XXXXXXXX
Sbjct: 61  KRISAVDDEDRSVKTVTAASLPVNIPDWSKILRNEYIENRRDGFXXXXXXXXXXXXXXXX 120

Query: 121 EVEEKRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSR 155
           + E+ RFRVPPHEFLAKTRIASFSVHEG+GRTLKGRDLSR
Sbjct: 121 DFEDGRFRVPPHEFLAKTRIASFSVHEGVGRTLKGRDLSR 160

[Close]

BLAST of CsaV3_1G014070 vs. NCBI nr
Match: XP_022964829.1 (uncharacterized protein LOC111464817 [Cucurbita moschata])

HSP 1 Score: 220.7 bits (561), Expect = 3.5e-54
Identity = 125/160 (78.12%), Postives = 133/160 (83.12%), Query Frame = 0


Query: 1   MAT-GKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRI 60
           MAT G +YFSRSKFRFL   DGPDH R D+ F+ DESDLFNSPHS  SPEFRR  SKSRI
Sbjct: 1   MATGGNTYFSRSKFRFLPTADGPDHRRTDSVFELDESDLFNSPHSSASPEFRRSVSKSRI 60

Query: 61  SKRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDF-----EDXXXXXXXX 120
           SKRIS VD  DRSV TV+AASLPVNIPDWSKILRNEYI+NRRD F       XXXXXXXX
Sbjct: 61  SKRISAVDDEDRSVKTVTAASLPVNIPDWSKILRNEYIENRRDGFXXXXXXXXXXXXXXX 120

Query: 121 EVEEKRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSR 155
           + E+ RFRVPPHEFLAKTRIASFSVHEG+GRTLKGRDLSR
Sbjct: 121 DFEDGRFRVPPHEFLAKTRIASFSVHEGVGRTLKGRDLSR 160

[Close]

BLAST of CsaV3_1G014070 vs. TAIR10
Match: AT5G60680.1 (Protein of unknown function, DUF584)

HSP 1 Score: 118.2 bits (295), Expect = 4.5e-27
Identity = 82/154 (53.25%), Postives = 94/154 (61.04%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60
           MATGKSY++R  +RFL          +D+  +FDESDLFN  HS  SP+F R  S S  S
Sbjct: 1   MATGKSYYARPSYRFLGTDQPSYFTASDSGLEFDESDLFNPIHS-DSPDFCRKISSSVRS 60

Query: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDXXXXXXXXEVEEKR 120
            +                  LPVN+PDWSKILR EY DN       XXXXXXXX      
Sbjct: 61  GK-XXXXXXXXXXXXXXXXXLPVNVPDWSKILRGEYRDN--XXXXXXXXXXXXXXXXXXX 120

Query: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSR 155
             +PPHEFLAKTR+ASFSVHEG+GRTLKGRDLSR
Sbjct: 121 XWLPPHEFLAKTRMASFSVHEGVGRTLKGRDLSR 150

[Close]

BLAST of CsaV3_1G014070 vs. TAIR10
Match: AT3G45210.1 (Protein of unknown function, DUF584)

HSP 1 Score: 110.9 bits (276), Expect = 7.1e-25
Identity = 73/153 (47.71%), Postives = 94/153 (61.44%), Query Frame = 0


Query: 2   ATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRISK 61
           AT KSY+ R   RFL P D   +   D+ F+FDESDL++  +   SPEFRR    S  ++
Sbjct: 4   ATRKSYYQRPSHRFL-PTDRTYNVTGDSEFEFDESDLYS--NRSDSPEFRRKLITS--NR 63

Query: 62  RISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDXXXXXXXXEVEEKRF 121
           + SP  V     TT  A+SLP+N+ +WSKIL  E   NR+    D          +    
Sbjct: 64  KSSPATV----TTTTVASSLPMNVQNWSKILGKE---NRKSIENDD---------DGGEG 123

Query: 122 RVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSR 155
           ++PPHE+LAKTR+ASFSVHEGIGRTLKGRD+SR
Sbjct: 124 KLPPHEYLAKTRMASFSVHEGIGRTLKGRDMSR 135

[Close]

BLAST of CsaV3_1G014070 vs. TAIR10
Match: AT2G28400.1 (Protein of unknown function, DUF584)

HSP 1 Score: 94.4 bits (233), Expect = 6.9e-20
Identity = 66/154 (42.86%), Postives = 83/154 (53.90%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60
           MAT K Y+ R   RF +      H    + F+ DE DLFN+  S +S  F          
Sbjct: 1   MATSKCYYPRPSHRFFTT---DQHVTATSDFELDEWDLFNT-GSDSSSSFSFSDLTITSG 60

Query: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDXXXXXXXXEVEEKR 120
           +  +   +   S +  +A+SLPVN+PDWSKIL +E    R+   E+          E  R
Sbjct: 61  RTGTNRQIHGGSDSGKAASSLPVNVPDWSKILGDESRRQRKISNEEEVDGDEILCGEGTR 120

Query: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSR 155
            RVPPHE LA  R+ASFSVHEG GRTLKGRDLSR
Sbjct: 121 -RVPPHELLANRRMASFSVHEGAGRTLKGRDLSR 149

[Close]

BLAST of CsaV3_1G014070 vs. TAIR10
Match: AT4G04630.1 (Protein of unknown function, DUF584)

HSP 1 Score: 64.7 bits (156), Expect = 5.9e-11
Identity = 53/132 (40.15%), Postives = 76/132 (57.58%), Query Frame = 0


Query: 32  DFDESDLFNSPHSG--TSPEFRRPAS--KSRISKRISPVDV-GDRSVTTVSAASLPVNIP 91
           +F E D+++    G  +SPE + P S   S       P ++   + V+ V  +S P+N+P
Sbjct: 26  EFQEEDVWSVLREGETSSPEMKIPKSHFSSXXXXXXXPWNIRRSKEVSGVKQSSAPMNVP 85

Query: 92  DWSKILRNEYIDNRRDDFEDXXXXXXXXEVEEKRFRVPPHEF----LAKTRIASFSVHEG 151
           DWSK+  +   + R       XXXXXXX        VPPHE+    LA+T+I+SFS+ EG
Sbjct: 86  DWSKVYGDSKSNRRSSHLH--XXXXXXXXXXXXXCMVPPHEWVARKLARTQISSFSMCEG 145

Query: 152 IGRTLKGRDLSR 155
           +GRTLKGRDLS+
Sbjct: 146 VGRTLKGRDLSK 155

[Close]

BLAST of CsaV3_1G014070 vs. TAIR10
Match: AT5G03230.1 (Protein of unknown function, DUF584)

HSP 1 Score: 63.5 bits (153), Expect = 1.3e-10
Identity = 60/158 (37.97%), Postives = 82/158 (51.90%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFN--SPHSGTSPEFRRPASKSR 60
           MA+ K +F + K+ +  P        ++  F+FDESD+ N        S + +R  S SR
Sbjct: 1   MASRKLFFVKPKYIYPEP---KPEMSDENVFEFDESDIHNLGDHQLPNSFDAKRSISISR 60

Query: 61  ISKRISPV-DVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNR-RDDFEDXXXXXXXXEV 120
           + ++ +   D G+R +T     SLPVNIPDWSKIL++EY  +        XXXXXXXX  
Sbjct: 61  LRRKPTKTGDSGNREIT--KTGSLPVNIPDWSKILKSEYRGHAIPXXXXXXXXXXXXXXX 120

Query: 121 EEKRFRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSR 155
                             +SF+VHEGIG T KGRDL R
Sbjct: 121 XXXXXXXXXXXXXXXXXXSSFTVHEGIGGTAKGRDLRR 153

[Close]

BLAST of CsaV3_1G014070 vs. TrEMBL
Match: tr|A0A0A0LSF7|A0A0A0LSF7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132110 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.1e-75
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60
           MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS
Sbjct: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60

Query: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDXXXXXXXXEVEEKR 120
           KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDXXXXXXXXEVEEKR
Sbjct: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDXXXXXXXXEVEEKR 120

Query: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSR 155
           FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSR
Sbjct: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSR 154

[Close]

BLAST of CsaV3_1G014070 vs. TrEMBL
Match: tr|A0A1S3CH53|A0A1S3CH53_CUCME (uncharacterized protein LOC103500846 OS=Cucumis melo OX=3656 GN=LOC103500846 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.4e-70
Identity = 147/154 (95.45%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60
           MATGKSYFSRSKFRFL  GDGPDH R+DAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS
Sbjct: 1   MATGKSYFSRSKFRFLPAGDGPDHCRSDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60

Query: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDXXXXXXXXEVEEKR 120
           KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYI+NRRDDFEDXXXXXXXX  EEKR
Sbjct: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIENRRDDFEDXXXXXXXXXFEEKR 120

Query: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSR 155
           FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSR
Sbjct: 121 FRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSR 154

[Close]

BLAST of CsaV3_1G014070 vs. TrEMBL
Match: tr|A0A2R6PF02|A0A2R6PF02_ACTCH (Classical arabinogalactan protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc30164 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 8.6e-33
Identity = 88/158 (55.70%), Postives = 110/158 (69.62%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60
           MA  KSYF+R+ +RFLS GD P    +D+ F+ DESD++NS  S  SPEF +PA+ SR+S
Sbjct: 1   MAASKSYFARANYRFLS-GDAP--VTSDSMFELDESDVWNSARS-ASPEFLKPAANSRVS 60

Query: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDXXXXXXXXEVEEKR 120
           K+ +    G  + T  +AASLPVNIPDWSKI + EY D+RR D  D        + +++ 
Sbjct: 61  KKQAASKRGGAAETGATAASLPVNIPDWSKIRKEEYKDSRRCDVGD-----SDGDCDDEG 120

Query: 121 FRVPPHEFLAK----TRIASFSVHEGIGRTLKGRDLSR 155
            R+PPHEFLAK    TRIASFSVHEGIGRTLKGRDLSR
Sbjct: 121 DRIPPHEFLAKQLARTRIASFSVHEGIGRTLKGRDLSR 149

[Close]

BLAST of CsaV3_1G014070 vs. TrEMBL
Match: tr|A0A2N9HPP0|A0A2N9HPP0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43999 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.3e-32
Identity = 90/164 (54.88%), Postives = 106/164 (64.63%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHH--RNDAAFDFDESDLFNSPHSGTSPEFRRPASKSR 60
           MA  KSY++R  +RFL P +   H    +D  F+ DES+++NS  S  SPEFR+P   SR
Sbjct: 1   MAASKSYYARPSYRFL-PNERDQHTPIAHDTGFEIDESEIYNSVRS-DSPEFRKPFPSSR 60

Query: 61  ISKRI----SPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDXXXXXXXX 120
           +SK+     S  D  DR V   + +SLPVNIPDWSKILR+EY DNRR D  D        
Sbjct: 61  LSKKSTSKPSRADAADRVVAGGTPSSLPVNIPDWSKILRDEYKDNRRRDSVDDDEWDCDD 120

Query: 121 EVEEKRFRVPPHEFLAK----TRIASFSVHEGIGRTLKGRDLSR 155
           E  E   RVPPHEFLAK    TRIASFSVHEG+GRTLKGRDLSR
Sbjct: 121 E-SENGVRVPPHEFLAKQMARTRIASFSVHEGVGRTLKGRDLSR 161

[Close]

BLAST of CsaV3_1G014070 vs. TrEMBL
Match: tr|A0A1S3ZLV3|A0A1S3ZLV3_TOBAC (uncharacterized protein LOC107788351 OS=Nicotiana tabacum OX=4097 GN=LOC107788351 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.2e-31
Identity = 84/158 (53.16%), Postives = 107/158 (67.72%), Query Frame = 0


Query: 1   MATGKSYFSRSKFRFLSPGDGPDHHRNDAAFDFDESDLFNSPHSGTSPEFRRPASKSRIS 60
           MA  KSYF+R+ +RFLS  D      +D  F+ DESD++NS    +SPEFR+P+S+    
Sbjct: 1   MAASKSYFARANYRFLS-NDRDISVTSDTMFELDESDVWNSSGRSSSPEFRKPSSRISRK 60

Query: 61  KRISPVDVGDRSVTTVSAASLPVNIPDWSKILRNEYIDNRRDDFEDXXXXXXXXEVEEKR 120
           + +S  D     VTT  AASLPVN+PDWSKIL++EY +NRR D +D        + E+  
Sbjct: 61  QSVSKSDRTCAGVTT--AASLPVNVPDWSKILKDEYRENRRSDSDD------DFDGEDGE 120

Query: 121 FRVPPHEF----LAKTRIASFSVHEGIGRTLKGRDLSR 155
            R+PPHEF    LA+TRIASFSVHEG+GRTLKGRDLSR
Sbjct: 121 NRIPPHEFLARQLARTRIASFSVHEGVGRTLKGRDLSR 149

The following BLAST results are available for this feature:

BLAST of CsaV3_1G014070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139450.1	1.6e-75	100.00	PREDICTED: uncharacterized protein LOC101217269 [Cucumis sativus] >KGN64850.1 hy...	[more]
XP_008462513.1	2.1e-70	95.45	PREDICTED: uncharacterized protein LOC103500846 [Cucumis melo]	[more]
XP_022970343.1	1.6e-54	75.00	uncharacterized protein LOC111469336 [Cucurbita maxima]	[more]
XP_023519114.1	1.6e-54	77.50	uncharacterized protein LOC111782574 [Cucurbita pepo subsp. pepo]	[more]
XP_022964829.1	3.5e-54	78.13	uncharacterized protein LOC111464817 [Cucurbita moschata]	[more]

BLAST of CsaV3_1G014070 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60680.1	4.5e-27	53.25	Protein of unknown function, DUF584	[more]
AT3G45210.1	7.1e-25	47.71	Protein of unknown function, DUF584	[more]
AT2G28400.1	6.9e-20	42.86	Protein of unknown function, DUF584	[more]
AT4G04630.1	5.9e-11	40.15	Protein of unknown function, DUF584	[more]
AT5G03230.1	1.3e-10	37.97	Protein of unknown function, DUF584	[more]

BLAST of CsaV3_1G014070 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G014070 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LSF7\|A0A0A0LSF7_CUCSA	1.1e-75	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132110 PE=4 SV=1	[more]
tr\|A0A1S3CH53\|A0A1S3CH53_CUCME	1.4e-70	95.45	uncharacterized protein LOC103500846 OS=Cucumis melo OX=3656 GN=LOC103500846 PE=...	[more]
tr\|A0A2R6PF02\|A0A2R6PF02_ACTCH	8.6e-33	55.70	Classical arabinogalactan protein OS=Actinidia chinensis var. chinensis OX=15908...	[more]
tr\|A0A2N9HPP0\|A0A2N9HPP0_FAGSY	3.3e-32	54.88	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43999 PE=4 SV=1	[more]
tr\|A0A1S3ZLV3\|A0A1S3ZLV3_TOBAC	1.2e-31	53.16	uncharacterized protein LOC107788351 OS=Nicotiana tabacum OX=4097 GN=LOC10778835...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007608	Senescence_reg_S40

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G014070.1	CsaV3_1G014070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 36..154 e-value: 1.6E-26 score: 94.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..122
None	No IPR available	PANTHER	PTHR33083:SF9	ARABIDOPSIS THALIANA GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MOK16-RELATED	coord: 2..154
None	No IPR available	PANTHER	PTHR33083	FAMILY NOT NAMED	coord: 2..154

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G014070	CSPI01G13890	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G014070	Cucsa.200430	Cucumber (Gy14) v1	cgycucB322
CsaV3_1G014070	CmaCh13G002570	Cucurbita maxima (Rimu)	cmacucB0234
CsaV3_1G014070	CmaCh12G008150	Cucurbita maxima (Rimu)	cmacucB0188
CsaV3_1G014070	CmoCh13G002630	Cucurbita moschata (Rifu)	cmocucB0221
CsaV3_1G014070	Cp4.1LG20g07370	Cucurbita pepo (Zucchini)	cpecucB0635
CsaV3_1G014070	Cp4.1LG07g06740	Cucurbita pepo (Zucchini)	cpecucB0996
CsaV3_1G014070	CsGy1G013900	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G014070	Carg23706	Silver-seed gourd	carcucB0192
CsaV3_1G014070	Carg03240	Silver-seed gourd	carcucB0363
CsaV3_1G014070	Cla001867	Watermelon (97103) v1	cucwmB060
CsaV3_1G014070	MELO3C004871	Melon (DHL92) v3.5.1	cucmeB010
CsaV3_1G014070	ClCG01G013780	Watermelon (Charleston Gray)	cucwcgB016
CsaV3_1G014070	Lsi03G000510	Bottle gourd (USVL1VR-Ls)	cuclsiB048
CsaV3_1G014070	MELO3C004871.2	Melon (DHL92) v3.6.1	cucmedB009
CsaV3_1G014070	Cla97C01G012760	Watermelon (97103) v2	cucwmbB002
CsaV3_1G014070	Bhi08G000141	Wax gourd	cucwgoB051

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G014070	Cucurbita moschata (Rifu)	cmocucB0172