CsGy1G009880 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G009880
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptioncentromere protein S isoform X1
LocationChr1 : 6148783 .. 6150784 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACTGGAATGGAAGAAGACGACTCCGCTTCCGAACTCTTGAGGGACAGGTTCCGGCTCTCCTCTATTTCTATCGCTGAAGCTGAAGGTTAACGTCATCTCCACTCCCGATTACTGAATGCTAATTCCATCTTTTCTTACTTTTTGTTTCTCTTACTCTTCTGTCCAACTGTTTGGTTTGTTTTGCAGCGAATAAAAGCGGCATGGAAATTTCTGAACCTGTGATGACTTGTGTTGCTGATTTAGCATTCAAATATACAAGTTTGTTTACCTCGCTTTTCTGCCTGTTTTGAGTCTGGAGTGTTATTTTTAGTGATTTATACTTCCATTCTTCATTATGTTCATAATCTAATTGCTTATTATTTTAATTTTACTTCTCTTCTACCTGTGCTTCCATCAATTTTAGGTAGCTTATTTGTGATTTCAACTATATATTTCTTTACTCTTTGCCGTGCATTCGGTTTTGTTAGGACGCCTCTCTGTGCTTTGTTGTTAAGTTGTGTGACCTAGTTGGAAGGAGACTGCATTACTTTGGTCAAGTTTAAGAGAGTAAAAATTAACTTTGAGAGAAGTTTCCAGATGAACTAATGATGGAGAGAGACTATTGTGATAACTTATGGAGTGACTCTGTACGATACTTTTGGATTCTAATCAGACATTCTTATAGTTCATATGAATGTTTCTTCTTACCTTCAGACTTACACCTTAAATTGATCATGTTAGGTGTAAAGCCTTAACTCTCGTTGTGTTCTTGTGGGAACATATGCCTTAGGGTAGAACGGTGCAAGACCCCTAAGAGCCAAAAATGGCGCTAATCTTTAAACTTAGATTTTGTGCTTTTGCCTCAAGCAAGACGTGTGGTTACTACTTTGCGGCTAAAAACTGTGTTATCTATAGCATTTTTTACTATAAATTTTGAAAATATATTCACATGCTATGAAAACTATTGTTATTATTCAATCAATTTCAGCAAAAAATAACTTTGAGGGACGGAGGGGTCTATTTGGAATGACTTGCTGACTGTTTTAAATACTTTTTTGCCCTTATAAACACTTCAAAAGTTAATCCAAACGCCCCCTAAATTTAAGATTTATCAAATGTACGAACTGAAAGTGTGGGAACCATATTTGTTTTCTTATCTTATTATTTTAATTTATATACAATATATTAGCTTCAAGTCTGTTTTCTGGCTTCTCTATTTTCCTGTTTGCATAATCCTTTTGTACTTCGAGTTCTATTTAATAAAGAAGCTTCTTTTTTTAAAAAAGTCGGTTTTCTGTTACCAATGAATATTCTATTCTTTCATTGTCTAAAAGAAGTAAATGTTACTTATATCATATGGATGAAATTAGTATATACCTTCATCAAATGCATGAATGATTTGGTAGATTTACAAAGGTTCAATTAGACCTTAAGTTCATATCTTGGTGTAGGGTCATGCTTATGTTTGGAATCACAGGGCTAACTTATTAAATGGCAATGGTACAATTCATGCGAGGAAAACGAAATTTTGTCACTCTCTTGCAGTAGTTCTAGTTCCGTCTAAGCCAGCAAGGAAAGGAGATAATTCTATCATATTTGTGCTTGATTTGTTTTTATGATTAATGTTGCAATGAGATAACGGATTGATAAATTGTGTAGCAGAACAGTTGGCGAAGGACCTTGAGTTATTTGCTCAGCATGCTGGTCGGAAGTCGGTAAATACAGAAGATGTAATACTAACAGGTTAGCATGTCCAATTCCCAAGTTGCTGTTTGTTCTATTAGTCTAGTTATATTTAGTCCATATGCAACAGACTTGAAGTAGTGCTTAATTGCCTAAACCTCTCCGCTTTTGCTTCATTTTGGTCTCAGCCCATAGAAACGAGCATTTAGCTGCCATATTAACATCCATCTGCAATGATCTAAAGACAAAAGAGCCACAGAGTGAAAGAAAGCGTAAAAAGGCACCAAAAAAGGATGATAGAGATAGAGGTGCCGTGCATATTGCTGACGCCTAA

mRNA sequence

ATGGAAACTGGAATGGAAGAAGACGACTCCGCTTCCGAACTCTTGAGGGACAGGTTCCGGCTCTCCTCTATTTCTATCGCTGAAGCTGAAGCGAATAAAAGCGGCATGGAAATTTCTGAACCTGTGATGACTTGTGTTGCTGATTTAGCATTCAAATATACAACAGAACAGTTGGCGAAGGACCTTGAGTTATTTGCTCAGCATGCTGGTCGGAAGTCGGTAAATACAGAAGATGTAATACTAACAGCCCATAGAAACGAGCATTTAGCTGCCATATTAACATCCATCTGCAATGATCTAAAGACAAAAGAGCCACAGAGTGAAAGAAAGCGTAAAAAGGCACCAAAAAAGGATGATAGAGATAGAGGTGCCGTGCATATTGCTGACGCCTAA

Coding sequence (CDS)

ATGGAAACTGGAATGGAAGAAGACGACTCCGCTTCCGAACTCTTGAGGGACAGGTTCCGGCTCTCCTCTATTTCTATCGCTGAAGCTGAAGCGAATAAAAGCGGCATGGAAATTTCTGAACCTGTGATGACTTGTGTTGCTGATTTAGCATTCAAATATACAACAGAACAGTTGGCGAAGGACCTTGAGTTATTTGCTCAGCATGCTGGTCGGAAGTCGGTAAATACAGAAGATGTAATACTAACAGCCCATAGAAACGAGCATTTAGCTGCCATATTAACATCCATCTGCAATGATCTAAAGACAAAAGAGCCACAGAGTGAAAGAAAGCGTAAAAAGGCACCAAAAAAGGATGATAGAGATAGAGGTGCCGTGCATATTGCTGACGCCTAA

Protein sequence

METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYTTEQLAKDLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDRDRGAVHIADA
Homology
[Close]
BLAST of CsGy1G009880 vs. NCBI nr
Match: XP_011652290.1 (PREDICTED: centromere protein S isoform X1 [Cucumis sativus] >XP_011652296.1 PREDICTED: centromere protein S isoform X1 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 1.3e-62
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYTTEQLAK 60
           METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYTTEQLAK
Sbjct: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYTTEQLAK 60

Query: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDR 120
           DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDR
Sbjct: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDR 120

Query: 121 DRGAVHIADA 131
           DRGAVHIADA
Sbjct: 121 DRGAVHIADA 130

[Close]
BLAST of CsGy1G009880 vs. NCBI nr
Match: XP_004154006.1 (PREDICTED: centromere protein S isoform X2 [Cucumis sativus] >XP_004154007.1 PREDICTED: centromere protein S isoform X2 [Cucumis sativus] >KGN64440.1 hypothetical protein Csa_1G051770 [Cucumis sativus])

HSP 1 Score: 240.4 bits (612), Expect = 3.5e-60
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 0 

Query: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYTTEQLAK 60
           METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKY T+QLAK
Sbjct: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKY-TKQLAK 60

Query: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDR 120
           DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDR
Sbjct: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDR 120

Query: 121 DRGAVHIADA 131
           DRGAVHIADA
Sbjct: 121 DRGAVHIADA 129

[Close]
BLAST of CsGy1G009880 vs. NCBI nr
Match: XP_008440142.1 (PREDICTED: centromere protein S isoform X1 [Cucumis melo])

HSP 1 Score: 239.2 bits (609), Expect = 7.9e-60
Identity = 125/130 (96.15%), Postives = 128/130 (98.46%), Query Frame = 0 

Query: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYTTEQLAK 60
           MET MEEDDSASELLRDRFRLS+ISIAEAEANKSGMEISEPVMTCVADLAFK+TTEQLAK
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAK 60

Query: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDR 120
           DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLK KEPQSERKRKKAPKKDDR
Sbjct: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR 120

Query: 121 DRGAVHIADA 131
           DRGAVHIA+A
Sbjct: 121 DRGAVHIAEA 130

[Close]
BLAST of CsGy1G009880 vs. NCBI nr
Match: XP_008440159.1 (PREDICTED: centromere protein S isoform X2 [Cucumis melo])

HSP 1 Score: 231.1 bits (588), Expect = 2.1e-57
Identity = 123/130 (94.62%), Postives = 127/130 (97.69%), Query Frame = 0 

Query: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYTTEQLAK 60
           MET MEEDDSASELLRDRFRLS+ISIAEAEANKSGMEISEPVMTCVADLAFK+ T+QLAK
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKF-TKQLAK 60

Query: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDR 120
           DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLK KEPQSERKRKKAPKKDDR
Sbjct: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR 120

Query: 121 DRGAVHIADA 131
           DRGAVHIA+A
Sbjct: 121 DRGAVHIAEA 129

[Close]
BLAST of CsGy1G009880 vs. NCBI nr
Match: XP_022137214.1 (protein MHF1 homolog [Momordica charantia] >XP_022137215.1 protein MHF1 homolog [Momordica charantia])

HSP 1 Score: 219.2 bits (557), Expect = 8.4e-54
Identity = 113/130 (86.92%), Postives = 122/130 (93.85%), Query Frame = 0 

Query: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYTTEQLAK 60
           METG EEDD+A+ELL DRFRLS+ISIAEAEA ++GMEISEPVMTCVA+LAFKYTTEQLAK
Sbjct: 1   METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYTTEQLAK 60

Query: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDR 120
           DLELFAQHAGRKSVNTEDVIL+AHRNEHLAA LTS CNDLKTKEPQ+ERKRKKA KK+DR
Sbjct: 61  DLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLKTKEPQTERKRKKASKKEDR 120

Query: 121 DRGAVHIADA 131
           DRG VHI DA
Sbjct: 121 DRGVVHINDA 130

[Close]
BLAST of CsGy1G009880 vs. TAIR10
Match: AT5G50930.1 (Histone superfamily protein)

HSP 1 Score: 148.7 bits (374), Expect = 2.5e-36
Identity = 80/115 (69.57%), Postives = 97/115 (84.35%), Query Frame = 0 

Query: 7   EDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYTTEQLAKDLELFA 66
           E+ S  +L+RDRFRLS+ISIAEAEA K+GMEI  PV+ CVADLAFKY  E +AKDLELFA
Sbjct: 116 EEYSMDDLIRDRFRLSAISIAEAEAKKNGMEIGGPVVACVADLAFKY-AENVAKDLELFA 175

Query: 67  QHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKK-APKKDDR 121
            HAGRK VN +DV+L+AHRN++LAA L S+CN+LK KEPQSERKRKK + KK+D+
Sbjct: 176 HHAGRKVVNMDDVVLSAHRNDNLAASLRSLCNELKAKEPQSERKRKKGSAKKEDK 229

[Close]
BLAST of CsGy1G009880 vs. Swiss-Prot
Match: sp|Q9FI55|CENPS_ARATH (Protein MHF1 homolog OS=Arabidopsis thaliana OX=3702 GN=MHF1 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 4.6e-35
Identity = 80/115 (69.57%), Postives = 97/115 (84.35%), Query Frame = 0 

Query: 7   EDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYTTEQLAKDLELFA 66
           E+ S  +L+RDRFRLS+ISIAEAEA K+GMEI  PV+ CVADLAFKY  E +AKDLELFA
Sbjct: 116 EEYSMDDLIRDRFRLSAISIAEAEAKKNGMEIGGPVVACVADLAFKY-AENVAKDLELFA 175

Query: 67  QHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKK-APKKDDR 121
            HAGRK VN +DV+L+AHRN++LAA L S+CN+LK KEPQSERKRKK + KK+D+
Sbjct: 176 HHAGRKVVNMDDVVLSAHRNDNLAASLRSLCNELKAKEPQSERKRKKGSAKKEDK 229

[Close]
BLAST of CsGy1G009880 vs. Swiss-Prot
Match: sp|Q2TBR7|CENPS_BOVIN (Centromere protein S OS=Bos taurus OX=9913 GN=CENPS PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-07
Identity = 36/105 (34.29%), Postives = 58/105 (55.24%), Query Frame = 0 

Query: 26  IAEAEANKSGMEISEPVMTCVADLAFKYTTEQLAKDLELFAQHAGRKSVNTEDVILTAHR 85
           + E  A+   M+ S+  +  ++++ F    E  AKDLE+FA+HA R ++NTEDV L A R
Sbjct: 30  LCEEVASDKDMQFSKQTIAAISEVTFG-QCENFAKDLEMFARHAKRSTINTEDVKLLARR 89

Query: 86  NEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDRDRGAVHIADA 131
           +  L   +T    D+   +   E+K KK    +D +R +V  A+A
Sbjct: 90  SHSLLKYITEKNEDI--AQLNLEKKAKKXXXLEDENRNSVESAEA 131

[Close]
BLAST of CsGy1G009880 vs. Swiss-Prot
Match: sp|Q8N2Z9|CENPS_HUMAN (Centromere protein S OS=Homo sapiens OX=9606 GN=CENPS PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.5e-06
Identity = 39/129 (30.23%), Postives = 66/129 (51.16%), Query Frame = 0 

Query: 2   ETGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYTTEQLAKD 61
           ET  ++  S  + L+     +   + E  A    M+ S+  +  +++L F+   E  AKD
Sbjct: 6   ETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFR-QCENFAKD 65

Query: 62  LELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDRD 121
           LE+FA+HA R ++NTEDV L A R+  L   +T    ++   +   ERK +K  K +D  
Sbjct: 66  LEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEI--AQINLERKAQKKKKSEDGS 125

Query: 122 RGAVHIADA 131
           + +   A+A
Sbjct: 126 KNSRQPAEA 131

[Close]
BLAST of CsGy1G009880 vs. Swiss-Prot
Match: sp|Q9D084|CENPS_MOUSE (Centromere protein S OS=Mus musculus OX=10090 GN=Cenps PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.2e-05
Identity = 31/93 (33.33%), Postives = 51/93 (54.84%), Query Frame = 0 

Query: 28  EAEANKSGMEISEPVMTCVADLAFKYTTEQLAKDLELFAQHAGRKSVNTEDVILTAHRNE 87
           E   NK  +  S+  +  ++++ F+   E  AKDLE+FA+HA R +V TEDV L A RN 
Sbjct: 32  EVTLNKQ-VNFSKQTIAAISEVTFR-QCENFAKDLEMFARHAKRSTVTTEDVKLLARRNN 91

Query: 88  HLAAILTSICNDLKTKEPQSERKRKKAPKKDDR 121
            L   +T    ++     + + K+K+ P+ + R
Sbjct: 92  SLLKYITEKNEEIAQLNLKGKAKKKRKPEDESR 122

[Close]
BLAST of CsGy1G009880 vs. Swiss-Prot
Match: sp|Q6NRI8|CENPS_XENLA (Centromere protein S OS=Xenopus laevis OX=8355 GN=cenps PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.2e-05
Identity = 32/99 (32.32%), Postives = 55/99 (55.56%), Query Frame = 0 

Query: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYTTEQLAK 60
           M  G EE  S ++ L+        S+ +  A+   ++ S+  +  ++++ F+   E  AK
Sbjct: 1   MAEGQEEHFSRTQRLKAAVHYVVGSLCQEVADDKEIDFSKQAIAAISEITFR-QCESFAK 60

Query: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICND 100
           DLE+FA+HA R ++N +DV L A R+  L A + S C+D
Sbjct: 61  DLEIFARHAKRTTINMDDVKLLARRSRSLYAHI-SKCSD 97

[Close]
BLAST of CsGy1G009880 vs. TrEMBL
Match: tr|A0A0A0LR97|A0A0A0LR97_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051770 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.3e-60
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 0 

Query: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYTTEQLAK 60
           METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKY T+QLAK
Sbjct: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKY-TKQLAK 60

Query: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDR 120
           DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDR
Sbjct: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDR 120

Query: 121 DRGAVHIADA 131
           DRGAVHIADA
Sbjct: 121 DRGAVHIADA 129

[Close]
BLAST of CsGy1G009880 vs. TrEMBL
Match: tr|A0A1S3B159|A0A1S3B159_CUCME (centromere protein S isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484694 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 5.2e-60
Identity = 125/130 (96.15%), Postives = 128/130 (98.46%), Query Frame = 0 

Query: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYTTEQLAK 60
           MET MEEDDSASELLRDRFRLS+ISIAEAEANKSGMEISEPVMTCVADLAFK+TTEQLAK
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAK 60

Query: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDR 120
           DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLK KEPQSERKRKKAPKKDDR
Sbjct: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR 120

Query: 121 DRGAVHIADA 131
           DRGAVHIA+A
Sbjct: 121 DRGAVHIAEA 130

[Close]
BLAST of CsGy1G009880 vs. TrEMBL
Match: tr|A0A1S3B173|A0A1S3B173_CUCME (centromere protein S isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484694 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.4e-57
Identity = 123/130 (94.62%), Postives = 127/130 (97.69%), Query Frame = 0 

Query: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYTTEQLAK 60
           MET MEEDDSASELLRDRFRLS+ISIAEAEANKSGMEISEPVMTCVADLAFK+ T+QLAK
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKF-TKQLAK 60

Query: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDR 120
           DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLK KEPQSERKRKKAPKKDDR
Sbjct: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR 120

Query: 121 DRGAVHIADA 131
           DRGAVHIA+A
Sbjct: 121 DRGAVHIAEA 129

[Close]
BLAST of CsGy1G009880 vs. TrEMBL
Match: tr|A0A2P6P4K1|A0A2P6P4K1_ROSCH (Putative transcription factor Hap3/NF-YB family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0188741 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.2e-40
Identity = 95/125 (76.00%), Postives = 106/125 (84.80%), Query Frame = 0 

Query: 6   EEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYTTEQLAKDLELF 65
           EEDDS SE+LRDRFRLS+ISIAEAEA +SGMEISEPV+ C++DLAFK+ TEQLAKDLELF
Sbjct: 4   EEDDSVSEVLRDRFRLSTISIAEAEAKRSGMEISEPVVACISDLAFKF-TEQLAKDLELF 63

Query: 66  AQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDR-DRGA 125
            QHAGRKS N EDVIL AHRNEHLAA+L S  +DLK KEPQS+RKRKKA KKDDR     
Sbjct: 64  TQHAGRKSANMEDVILCAHRNEHLAALLRSYRDDLKAKEPQSDRKRKKASKKDDRAPEDI 123

Query: 126 VHIAD 130
           VH+ D
Sbjct: 124 VHVPD 127

[Close]
BLAST of CsGy1G009880 vs. TrEMBL
Match: tr|A0A2P2J6B7|A0A2P2J6B7_RHIMU (Centromere protein S-like OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 4.6e-40
Identity = 93/125 (74.40%), Postives = 104/125 (83.20%), Query Frame = 0 

Query: 6   EEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYTTEQLAKDLELF 65
           EEDD  SELLRDRFRLS+ISIAEAEA +  MEISEP+M C+AD+AFKY +EQLAKDLELF
Sbjct: 12  EEDDLVSELLRDRFRLSTISIAEAEAKRGDMEISEPIMVCIADMAFKY-SEQLAKDLELF 71

Query: 66  AQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKR-KKAPKKDDRDRGA 125
           A HAGRKSVN EDV+L+AHRNEHLAA+L S CNDLK KEPQ ERKR KK  K+D+    A
Sbjct: 72  AHHAGRKSVNMEDVVLSAHRNEHLAALLRSFCNDLKAKEPQPERKRQKKLKKEDNAATSA 131

Query: 126 VHIAD 130
           VHI D
Sbjct: 132 VHILD 135

The following BLAST results are available for this feature:
BLAST of CsGy1G009880 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011652290.11.3e-62100.00PREDICTED: centromere protein S isoform X1 [Cucumis sativus] >XP_011652296.1 PRE... [more]
XP_004154006.13.5e-6098.46PREDICTED: centromere protein S isoform X2 [Cucumis sativus] >XP_004154007.1 PRE... [more]
XP_008440142.17.9e-6096.15PREDICTED: centromere protein S isoform X1 [Cucumis melo][more]
XP_008440159.12.1e-5794.62PREDICTED: centromere protein S isoform X2 [Cucumis melo][more]
XP_022137214.18.4e-5486.92protein MHF1 homolog [Momordica charantia] >XP_022137215.1 protein MHF1 homolog ... [more]
BLAST of CsGy1G009880 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G50930.12.5e-3669.57Histone superfamily protein[more]
BLAST of CsGy1G009880 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FI55|CENPS_ARATH4.6e-3569.57Protein MHF1 homolog OS=Arabidopsis thaliana OX=3702 GN=MHF1 PE=3 SV=1[more]
sp|Q2TBR7|CENPS_BOVIN2.4e-0734.29Centromere protein S OS=Bos taurus OX=9913 GN=CENPS PE=2 SV=1[more]
sp|Q8N2Z9|CENPS_HUMAN4.5e-0630.23Centromere protein S OS=Homo sapiens OX=9606 GN=CENPS PE=1 SV=1[more]
sp|Q9D084|CENPS_MOUSE2.2e-0533.33Centromere protein S OS=Mus musculus OX=10090 GN=Cenps PE=2 SV=1[more]
sp|Q6NRI8|CENPS_XENLA2.2e-0532.32Centromere protein S OS=Xenopus laevis OX=8355 GN=cenps PE=2 SV=1[more]
BLAST of CsGy1G009880 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LR97|A0A0A0LR97_CUCSA2.3e-6098.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051770 PE=4 SV=1[more]
tr|A0A1S3B159|A0A1S3B159_CUCME5.2e-6096.15centromere protein S isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484694 PE=4 SV=... [more]
tr|A0A1S3B173|A0A1S3B173_CUCME1.4e-5794.62centromere protein S isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484694 PE=4 SV=... [more]
tr|A0A2P6P4K1|A0A2P6P4K1_ROSCH1.2e-4076.00Putative transcription factor Hap3/NF-YB family OS=Rosa chinensis OX=74649 GN=Rc... [more]
tr|A0A2P2J6B7|A0A2P2J6B7_RHIMU4.6e-4074.40Centromere protein S-like OS=Rhizophora mucronata OX=61149 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0071821FANCM-MHF complex
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR029003CENP-S/Mhf1
IPR009072Histone-fold
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0071821 FANCM-MHF complex
molecular_function GO:0046982 protein heterodimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G009880.1CsGy1G009880.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 1..113
e-value: 4.8E-27
score: 96.4
IPR009072Histone-foldSUPERFAMILYSSF47113Histone-foldcoord: 35..89
IPR029003CENP-S/Mhf1PFAMPF15630CENP-Scoord: 22..89
e-value: 3.6E-17
score: 62.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..130
NoneNo IPR availablePANTHERPTHR22980:SF0CENTROMERE PROTEIN Scoord: 6..119
NoneNo IPR availablePANTHERPTHR22980CORTISTATINcoord: 6..119

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G009880Csa1G051770Cucumber (Chinese Long) v2cgybcuB001
CsGy1G009880ClCG03G004020Watermelon (Charleston Gray)cgybwcgB033
CsGy1G009880CSPI01G09860Wild cucumber (PI 183967)cgybcpiB001
CsGy1G009880CmaCh18G002910Cucurbita maxima (Rimu)cgybcmaB093
CsGy1G009880CmoCh18G002390Cucurbita moschata (Rifu)cgybcmoB082
CsGy1G009880Lsi02G005280Bottle gourd (USVL1VR-Ls)cgyblsiB018
CsGy1G009880Cp4.1LG09g09290Cucurbita pepo (Zucchini)cgybcpeB018
CsGy1G009880MELO3C035737.2Melon (DHL92) v3.6.1cgybmedB020
CsGy1G009880CsaV3_1G009910Cucumber (Chinese Long) v3cgybcucB002
CsGy1G009880Cla97C03G055200Watermelon (97103) v2cgybwmbB032
CsGy1G009880Bhi08G001261Wax gourdcgybwgoB029
CsGy1G009880Carg06818Silver-seed gourdcarcgybB0500
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G009880Cucumber (Gy14) v2cgybcgybB005
CsGy1G009880Cucurbita maxima (Rimu)cgybcmaB049
CsGy1G009880Cucurbita maxima (Rimu)cgybcmaB063
CsGy1G009880Cucurbita moschata (Rifu)cgybcmoB046
CsGy1G009880Cucurbita moschata (Rifu)cgybcmoB058
CsGy1G009880Cucurbita pepo (Zucchini)cgybcpeB080
CsGy1G009880Cucurbita pepo (Zucchini)cgybcpeB123
CsGy1G009880Cucumber (Chinese Long) v2cgybcuB014
CsGy1G009880Bottle gourd (USVL1VR-Ls)cgyblsiB064
CsGy1G009880Melon (DHL92) v3.5.1cgybmeB022
CsGy1G009880Melon (DHL92) v3.5.1cgybmeB046
CsGy1G009880Melon (DHL92) v3.6.1cgybmedB041
CsGy1G009880Watermelon (Charleston Gray)cgybwcgB069
CsGy1G009880Watermelon (97103) v1cgybwmB010
CsGy1G009880Watermelon (97103) v1cgybwmB087
CsGy1G009880Wild cucumber (PI 183967)cgybcpiB013
CsGy1G009880Silver-seed gourdcarcgybB0989
CsGy1G009880Cucumber (Chinese Long) v3cgybcucB010
CsGy1G009880Watermelon (97103) v2cgybwmbB070