Cp4.1LG09g09290 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g09290
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCentromere S
LocationCp4.1LG09 : 8429865 .. 8432228 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCATCCCCGTCGCGAGTGCCATTTCTGGAGGGAATAAAGGCGGGTGGGAACAGGTGCAGCGAAATGGAGTAAACTCTGTGTCCAGAAAGCTCTGCAATGGAGACTGGGATGGAAGAAGACGACTCCACGGCCGAACTCTTGAGGGACCGATTCCGACTGTCTGCCATTTCCATCGCTGAAGCTGAAGGTTAATTATCTTCATCTTACTCTCTTCATTTGCAAGCTTGTCTGGTTGTATGTGTAATACAATCAGAATCAACAGGAAAAATGAAGAAGTATTATCCTCTGATTACTGTATGCAAAGACGAAGTTTTCGTATTTCTGTTTCGCTTACTCTAATTGTGAACTGTTTGGTTTGTTTTGCAGCGAAGAGAAGCGGGATGGAAATCTCTGTACCGGTGATGACTTGTGTCGCTGAGTTAGCGTTCAAATATACAAGTTAGTTTACTGTTCTTTCCTTTCCTGTTTTGAGTCTGCAATGTTATTATGAGCATTTGGTTTCTACATGACTACAACCGATTTCAGGATAATGTATAGATCACTGAAATTGCTAATTCCACCTTTCGTTAGAATTACAGTCTGCATTATGTTGATGACCTAATTGCTAATTGTTTTAGTATCCATTCTCTTCTCGCTGTGTTTCTATCATTTTTAGGTAGTTTATATGCAGTTTCGGTTAGAAATTTCCTTTCTATTTAGCATGCATTTGGTTTGTTGGGATGCCTTTCTGTGCTATGTAGTTAAATCGTGTGATCTAGTTGGAAGGAAACTACACAAGTTGTGTCAAGTTTAAGACAGGAAAGTGTTGCAGGAAGTACAAATGATGGAGGGGCCATTGTGATAACTTAGTGAATGAGTTTGCACGATACCTTTGGATTCTAATCAGATGTTCTTATAGTTCATATCAATGCTTCTTTCAGTATGAGGGACAAAAAGAAGCCCCTCATTCTACCTTGAGATTTACACCTTACAGCGTTTGTGTTAGGTGTAAAGCCTTTAACCTTGTCATACTCTTGTGGGACCCTATGCCTCTGGAAGAAGAGGTGTAAGATTCTTATGAAGCAAAAATGTTGAGTTATACCATGGGAAGGAGAGTTCTCGTTATCTTATTATCTTTCTTTGTTTATATTTCAATCTCGTAAAGAAAACATAGTTATTATTTTAATTTATATTTATACATTAGCTTCAAGTCAGTTTTCTGTTACCGATGAATACTTCATTCATTGTGTTAAAGAAGAAAACATATACTTATATCATATCCATGATGTTAAGGTATTCTTCCATCATACACTTGAATGATTTGGTAGGTTTACTAGGTTTTGACCATAATTTGAGCTCATACCATGGTGTAGGGTCATGCTTATGTTTGTAGTTGCAAGGCTACCGTATGAACTACCAATTTGTATAATATATGCAAGGAAAACAAAGTTTCGTTTACTGTGCTACTATGGTTGTATCTCAGGCAGCAAGGAGATCATTCGGTCATAATTGTGTTTGATTTGTTTTTATGATTCTCAAAGTTTTGCAATGAGATAGATGACGGAATGGTAACTTGTGTAACAGAACAGTTGGCAAAGGACCTTGAGTTATTTGCTCATCATGGTGGTCGGAAATCTGTGAATACGGAAGACGTCATACTCTCAGGTTAGAGTGACCGATTCCCAAGTTTGCCTGTCCTGATATCTGTTAATCTCAGCTTGCACTCCAGTTCTTCATTTGTTTTGTTGTAGTACTGTCTAGTTATATTTAGTCAATATGCATCCGACTTTAATCGGAGTATTAATCGCTTGAACCTCTTTGTTTCTGCATCATTTTGGTCTCAGCCCATAGAAACGAGCATCTGGCTGCCTCATTATCGTCCTTCTGCCATGAACTAAAGACAAAAGAACCTCAAAGTGAGAGAAAGCGGAAAAAGGCACCAAAAAAGGAAGATAAAAGTGCAATACATATTACTGACGCATAATCACATCTCCCGGTGGGCAGATCTCTAGTTAGTAAGGGTACCAAGTAATGACAATTTTTCCTATTTCTAGGTTATACTAATTAGTAATGTCATTATGAAATACCATGGGCCTATGAGATATTACTCTGATTTAAAGGATAAGCTTCTGCATCATGTGTGTTCATTAAAGTGTTTCCAAACGCAGGAAACTTAGCTTTTGGTTTGTTTTAGGTATTTGATATTGTCGAAGCATGAGGTCAATGTTTAATGGTGGATTTCGTTGGGAACATGAAATGAGCTGAACAGTTAAAAAGCTTGAGAAATTGTTCTATGTAAATTTACAAAACATTTATAAGATTTGAACTTTTAGTTAACTGCACAACATTTTGATCATGTGAAGCATATTTGCATCTGCTCCGGTG

mRNA sequence

GCATCCCCGTCGCGAGTGCCATTTCTGGAGGGAATAAAGGCGGGTGGGAACAGGTGCAGCGAAATGGAGTAAACTCTGTGTCCAGAAAGCTCTGCAATGGAGACTGGGATGGAAGAAGACGACTCCACGGCCGAACTCTTGAGGGACCGATTCCGACTGTCTGCCATTTCCATCGCTGAAGCTGAAGCGAAGAGAAGCGGGATGGAAATCTCTGTACCGGTGATGACTTGTGTCGCTGAGTTAGCGTTCAAATATACAAATGACGGAATGGTAACTTGTGTAACAGAACAGTTGGCAAAGGACCTTGAGTTATTTGCTCATCATGGTGGTCGGAAATCTGTGAATACGGAAGACGTCATACTCTCAGCCCATAGAAACGAGCATCTGGCTGCCTCATTATCGTCCTTCTGCCATGAACTAAAGACAAAAGAACCTCAAAGTGAGAGAAAGCGGAAAAAGGCACCAAAAAAGGAAGATAAAAGTGCAATACATATTACTGACGCATAATCACATCTCCCGGTGGGCAGATCTCTAGTTAGTAAGGGTACCAAGTAATGACAATTTTTCCTATTTCTAGGTTATACTAATTAGTAATGTCATTATGAAATACCATGGGCCTATGAGATATTACTCTGATTTAAAGGATAAGCTTCTGCATCATGTGTGTTCATTAAAGTGTTTCCAAACGCAGGAAACTTAGCTTTTGGTTTGTTTTAGGTATTTGATATTGTCGAAGCATGAGGTCAATGTTTAATGGTGGATTTCGTTGGGAACATGAAATGAGCTGAACAGTTAAAAAGCTTGAGAAATTGTTCTATGTAAATTTACAAAACATTTATAAGATTTGAACTTTTAGTTAACTGCACAACATTTTGATCATGTGAAGCATATTTGCATCTGCTCCGGTG

Coding sequence (CDS)

ATGGAGACTGGGATGGAAGAAGACGACTCCACGGCCGAACTCTTGAGGGACCGATTCCGACTGTCTGCCATTTCCATCGCTGAAGCTGAAGCGAAGAGAAGCGGGATGGAAATCTCTGTACCGGTGATGACTTGTGTCGCTGAGTTAGCGTTCAAATATACAAATGACGGAATGGTAACTTGTGTAACAGAACAGTTGGCAAAGGACCTTGAGTTATTTGCTCATCATGGTGGTCGGAAATCTGTGAATACGGAAGACGTCATACTCTCAGCCCATAGAAACGAGCATCTGGCTGCCTCATTATCGTCCTTCTGCCATGAACTAAAGACAAAAGAACCTCAAAGTGAGAGAAAGCGGAAAAAGGCACCAAAAAAGGAAGATAAAAGTGCAATACATATTACTGACGCATAA

Protein sequence

METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTNDGMVTCVTEQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKEPQSERKRKKAPKKEDKSAIHITDA
Homology
[Close]
BLAST of Cp4.1LG09g09290 vs. TrEMBL
Match: A0A0A0LR97_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G051770 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.7e-47
Identity = 106/138 (76.81%), Postives = 118/138 (85.51%), Query Frame = 1 

Query: 1   METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTNDGMVT 60
           METGMEEDDS +ELLRDRFRLS+ISIAEAEA +SGMEIS PVMTCVA+LAFKY       
Sbjct: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKY------- 60

Query: 61  CVTEQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKEPQSERKRK 120
             T+QLAKDLELFA H GRKSVNTEDVIL+AHRNEHLAA L+S C++LKTKEPQSERKRK
Sbjct: 61  --TKQLAKDLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRK 120

Query: 121 KAPKKE--DKSAIHITDA 137
           KAPKK+  D+ A+HI DA
Sbjct: 121 KAPKKDDRDRGAVHIADA 129

[Close]
BLAST of Cp4.1LG09g09290 vs. TrEMBL
Match: A0A022QDG1_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a016064mg PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.4e-39
Identity = 89/133 (66.92%), Postives = 108/133 (81.20%), Query Frame = 1 

Query: 6   EEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTNDGMVTCVTEQ 65
           EE++S +ELLRDRFRL  I+IAEAEAK++GME+S P+M C+++LAFKY          +Q
Sbjct: 11  EEEESASELLRDRFRLCTIAIAEAEAKQNGMEVSQPIMACISDLAFKY---------AQQ 70

Query: 66  LAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKEPQSERKRKKAPKK 125
           LAKDLELFA HGGRKSVN EDVILSAHRN+HL+ASL SFC++LK KEPQS+RKRKK  KK
Sbjct: 71  LAKDLELFAQHGGRKSVNMEDVILSAHRNDHLSASLRSFCNDLKAKEPQSDRKRKKNTKK 130

Query: 126 EDKSA---IHITD 136
           EDK+A   +HI D
Sbjct: 131 EDKAAADVLHIAD 134

[Close]
BLAST of Cp4.1LG09g09290 vs. TrEMBL
Match: A0A0D2PT00_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G054300 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.9e-38
Identity = 90/123 (73.17%), Postives = 100/123 (81.30%), Query Frame = 1 

Query: 6   EEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTNDGMVTCVTEQ 65
           EEDDS ++LLRDRFRLSAISIAE+EAKRSGMEIS P++ C+A+LAFKY           Q
Sbjct: 17  EEDDSVSDLLRDRFRLSAISIAESEAKRSGMEISPPIVACIADLAFKYIG---------Q 76

Query: 66  LAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKEPQSERKRKKAPKK 125
           LAKDLELFAHH GRKSV   DVI+SAHRNEHLAASL S+  ELK KEPQSERKRKK P+K
Sbjct: 77  LAKDLELFAHHAGRKSVTMTDVIVSAHRNEHLAASLRSYSDELKAKEPQSERKRKKVPRK 130

Query: 126 EDK 129
           EDK
Sbjct: 137 EDK 130

[Close]
BLAST of Cp4.1LG09g09290 vs. TrEMBL
Match: M5WE31_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017850mg PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.4e-38
Identity = 92/134 (68.66%), Postives = 107/134 (79.85%), Query Frame = 1 

Query: 6   EEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTNDGMVTCVTEQ 65
           EE+DS +ELLRDRFR+S ISIAEAEAKR+ MEIS PVMTC+A+LAFK+         TEQ
Sbjct: 4   EEEDSVSELLRDRFRVSTISIAEAEAKRNDMEISGPVMTCIADLAFKF---------TEQ 63

Query: 66  LAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKEPQSERKRKKAPKK 125
           LAKDLELFA H GRK+ N EDVILSAHRNEHLAA L SF ++LK +EPQSERKRKK+ KK
Sbjct: 64  LAKDLELFAQHAGRKTANMEDVILSAHRNEHLAALLRSFSNDLKAREPQSERKRKKSSKK 123

Query: 126 EDK---SAIHITDA 137
           ED+   S +HI D+
Sbjct: 124 EDQATTSVVHIPDS 128

[Close]
BLAST of Cp4.1LG09g09290 vs. TrEMBL
Match: A0A0B0PHH8_GOSAR (Centromere S OS=Gossypium arboreum GN=F383_09529 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 4.1e-38
Identity = 89/123 (72.36%), Postives = 100/123 (81.30%), Query Frame = 1 

Query: 6   EEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTNDGMVTCVTEQ 65
           EEDDS ++LLRDRFRLSAISIAE+EAKRSGMEIS P++ C+A+LAFKY           Q
Sbjct: 17  EEDDSVSDLLRDRFRLSAISIAESEAKRSGMEISPPIVACIADLAFKYIG---------Q 76

Query: 66  LAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKEPQSERKRKKAPKK 125
           LAKDLELFAHH GRKSV   DVI+SAHRNEHLAASL S+  ELK KEPQS+RKRKK P+K
Sbjct: 77  LAKDLELFAHHAGRKSVTMTDVIVSAHRNEHLAASLRSYSDELKAKEPQSDRKRKKVPRK 130

Query: 126 EDK 129
           EDK
Sbjct: 137 EDK 130

[Close]
BLAST of Cp4.1LG09g09290 vs. TAIR10
Match: AT5G50930.1 (AT5G50930.1 Histone superfamily protein)

HSP 1 Score: 150.6 bits (379), Expect = 7.0e-37
Identity = 84/125 (67.20%), Postives = 100/125 (80.00%), Query Frame = 1 

Query: 7   EDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTNDGMVTCVTEQL 66
           E+ S  +L+RDRFRLSAISIAEAEAK++GMEI  PV+ CVA+LAFKY          E +
Sbjct: 116 EEYSMDDLIRDRFRLSAISIAEAEAKKNGMEIGGPVVACVADLAFKY---------AENV 175

Query: 67  AKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKEPQSERKRKK-APKK 126
           AKDLELFAHH GRK VN +DV+LSAHRN++LAASL S C+ELK KEPQSERKRKK + KK
Sbjct: 176 AKDLELFAHHAGRKVVNMDDVVLSAHRNDNLAASLRSLCNELKAKEPQSERKRKKGSAKK 231

Query: 127 EDKSA 131
           EDK++
Sbjct: 236 EDKAS 231

[Close]
BLAST of Cp4.1LG09g09290 vs. NCBI nr
Match: gi|778658214|ref|XP_011652290.1| (PREDICTED: centromere protein S isoform X1 [Cucumis sativus])

HSP 1 Score: 199.5 bits (506), Expect = 3.7e-48
Identity = 108/138 (78.26%), Postives = 119/138 (86.23%), Query Frame = 1 

Query: 1   METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTNDGMVT 60
           METGMEEDDS +ELLRDRFRLS+ISIAEAEA +SGMEIS PVMTCVA+LAFKYT      
Sbjct: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYT------ 60

Query: 61  CVTEQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKEPQSERKRK 120
             TEQLAKDLELFA H GRKSVNTEDVIL+AHRNEHLAA L+S C++LKTKEPQSERKRK
Sbjct: 61  --TEQLAKDLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRK 120

Query: 121 KAPKKE--DKSAIHITDA 137
           KAPKK+  D+ A+HI DA
Sbjct: 121 KAPKKDDRDRGAVHIADA 130

[Close]
BLAST of Cp4.1LG09g09290 vs. NCBI nr
Match: gi|449473866|ref|XP_004154006.1| (PREDICTED: centromere protein S isoform X2 [Cucumis sativus])

HSP 1 Score: 195.7 bits (496), Expect = 5.4e-47
Identity = 106/138 (76.81%), Postives = 118/138 (85.51%), Query Frame = 1 

Query: 1   METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTNDGMVT 60
           METGMEEDDS +ELLRDRFRLS+ISIAEAEA +SGMEIS PVMTCVA+LAFKY       
Sbjct: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKY------- 60

Query: 61  CVTEQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKEPQSERKRK 120
             T+QLAKDLELFA H GRKSVNTEDVIL+AHRNEHLAA L+S C++LKTKEPQSERKRK
Sbjct: 61  --TKQLAKDLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRK 120

Query: 121 KAPKKE--DKSAIHITDA 137
           KAPKK+  D+ A+HI DA
Sbjct: 121 KAPKKDDRDRGAVHIADA 129

[Close]
BLAST of Cp4.1LG09g09290 vs. NCBI nr
Match: gi|659067571|ref|XP_008440142.1| (PREDICTED: centromere protein S isoform X1 [Cucumis melo])

HSP 1 Score: 191.0 bits (484), Expect = 1.3e-45
Identity = 104/138 (75.36%), Postives = 116/138 (84.06%), Query Frame = 1 

Query: 1   METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTNDGMVT 60
           MET MEEDDS +ELLRDRFRLS ISIAEAEA +SGMEIS PVMTCVA+LAFK+T      
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFT------ 60

Query: 61  CVTEQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKEPQSERKRK 120
             TEQLAKDLELFA H GRKSVNTEDVIL+AHRNEHLAA L+S C++LK KEPQSERKRK
Sbjct: 61  --TEQLAKDLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRK 120

Query: 121 KAPKKE--DKSAIHITDA 137
           KAPKK+  D+ A+HI +A
Sbjct: 121 KAPKKDDRDRGAVHIAEA 130

[Close]
BLAST of Cp4.1LG09g09290 vs. NCBI nr
Match: gi|659067575|ref|XP_008440159.1| (PREDICTED: centromere protein S isoform X2 [Cucumis melo])

HSP 1 Score: 187.2 bits (474), Expect = 1.9e-44
Identity = 102/138 (73.91%), Postives = 115/138 (83.33%), Query Frame = 1 

Query: 1   METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTNDGMVT 60
           MET MEEDDS +ELLRDRFRLS ISIAEAEA +SGMEIS PVMTCVA+LAFK+       
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKF------- 60

Query: 61  CVTEQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKEPQSERKRK 120
             T+QLAKDLELFA H GRKSVNTEDVIL+AHRNEHLAA L+S C++LK KEPQSERKRK
Sbjct: 61  --TKQLAKDLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRK 120

Query: 121 KAPKKE--DKSAIHITDA 137
           KAPKK+  D+ A+HI +A
Sbjct: 121 KAPKKDDRDRGAVHIAEA 129

[Close]
BLAST of Cp4.1LG09g09290 vs. NCBI nr
Match: gi|694422429|ref|XP_009339043.1| (PREDICTED: centromere protein S-like [Pyrus x bretschneideri])

HSP 1 Score: 171.0 bits (432), Expect = 1.4e-39
Identity = 94/134 (70.15%), Postives = 106/134 (79.10%), Query Frame = 1 

Query: 6   EEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTNDGMVTCVTEQ 65
           EEDDS +ELLRDRFRLS I IAE EAKR+ MEIS PVMTC+A+LAFKY         TEQ
Sbjct: 4   EEDDSVSELLRDRFRLSTIHIAETEAKRNEMEISGPVMTCIADLAFKY---------TEQ 63

Query: 66  LAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKEPQSERKRKKAPKK 125
           LAKDLELF+ HGGRK+ + EDVILS HRNEHLAA L SFC++LK KEPQSERKRKKA KK
Sbjct: 64  LAKDLELFSQHGGRKTASMEDVILSVHRNEHLAAMLRSFCNDLKAKEPQSERKRKKASKK 123

Query: 126 EDK---SAIHITDA 137
           ED+   S +HI D+
Sbjct: 124 EDQATTSVVHIPDS 128

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g09290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG09g09290 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LR97_CUCSA3.7e-4776.81Uncharacterized protein OS=Cucumis sativus GN=Csa_1G051770 PE=4 SV=1[more]
A0A022QDG1_ERYGU6.4e-3966.92Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a016064mg PE=4 SV=1[more]
A0A0D2PT00_GOSRA1.9e-3873.17Uncharacterized protein OS=Gossypium raimondii GN=B456_001G054300 PE=4 SV=1[more]
M5WE31_PRUPE2.4e-3868.66Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017850mg PE=4 SV=1[more]
A0A0B0PHH8_GOSAR4.1e-3872.36Centromere S OS=Gossypium arboreum GN=F383_09529 PE=4 SV=1[more]
BLAST of Cp4.1LG09g09290 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G50930.17.0e-3767.20 Histone superfamily protein[more]
BLAST of Cp4.1LG09g09290 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778658214|ref|XP_011652290.1|3.7e-4878.26PREDICTED: centromere protein S isoform X1 [Cucumis sativus][more]
gi|449473866|ref|XP_004154006.1|5.4e-4776.81PREDICTED: centromere protein S isoform X2 [Cucumis sativus][more]
gi|659067571|ref|XP_008440142.1|1.3e-4575.36PREDICTED: centromere protein S isoform X1 [Cucumis melo][more]
gi|659067575|ref|XP_008440159.1|1.9e-4473.91PREDICTED: centromere protein S isoform X2 [Cucumis melo][more]
gi|694422429|ref|XP_009339043.1|1.4e-3970.15PREDICTED: centromere protein S-like [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Vocabulary: Cellular Component
TermDefinition
GO:0071821FANCM-MHF complex
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0007129 synapsis
cellular_component GO:0071821 FANCM-MHF complex
molecular_function GO:0046982 protein heterodimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g09290.1Cp4.1LG09g09290.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 57..95
score: 9.
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 58..96
score: 7.2
NoneNo IPR availablePANTHERPTHR22980CORTISTATINcoord: 5..130
score: 2.9
NoneNo IPR availablePANTHERPTHR22980:SF0CENTROMERE PROTEIN Scoord: 5..130
score: 2.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG09g09290Cucsa.134740Cucumber (Gy14) v1cgycpeB0357
Cp4.1LG09g09290CmoCh18G002390Cucurbita moschata (Rifu)cmocpeB377
Cp4.1LG09g09290Csa1G051770Cucumber (Chinese Long) v2cpecuB029
Cp4.1LG09g09290ClCG03G004020Watermelon (Charleston Gray)cpewcgB036
Cp4.1LG09g09290CSPI01G09860Wild cucumber (PI 183967)cpecpiB025
Cp4.1LG09g09290Lsi02G005280Bottle gourd (USVL1VR-Ls)cpelsiB026
Cp4.1LG09g09290MELO3C035737.2Melon (DHL92) v3.6.1cpemedB031
Cp4.1LG09g09290CsaV3_1G009910Cucumber (Chinese Long) v3cpecucB0031
Cp4.1LG09g09290Bhi08G001261Wax gourdcpewgoB0048
Cp4.1LG09g09290CsGy1G009880Cucumber (Gy14) v2cgybcpeB018
Cp4.1LG09g09290Carg06818Silver-seed gourdcarcpeB0694
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g09290Cucurbita pepo (Zucchini)cpecpeB045
Cp4.1LG09g09290Cucurbita maxima (Rimu)cmacpeB214
Cp4.1LG09g09290Cucurbita maxima (Rimu)cmacpeB414
Cp4.1LG09g09290Cucurbita moschata (Rifu)cmocpeB184
Cp4.1LG09g09290Watermelon (97103) v1cpewmB025
Cp4.1LG09g09290Melon (DHL92) v3.5.1cpemeB026
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