CsGy1G009490 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G009490
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	protein ROOT INITIATION DEFECTIVE 3-like isoform X2
Location	Chr1 : 5891704 .. 5894668 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTTTTTTTTTTTGAGCATCAGAAAATGGGCAATGGCGGCGAAAGTATGGCGTTGGCTGTTTGCAGCGATAGAAACATGGGATTAGGGATTACTATTTGGGATGTGAAAACAGGCCAAACTCTCCTTCACATTCCGACTTGCGCTTCGCCTCCCTACGGCTTCATTTGCTTGAGAAACGAGTTCTTTGTTGCTTCTCAGACTCGTAAGGAAGGGTCCGTTGGTGGTGGATCCATTTTCATTTGGTCACTCAACAAGGTATTCTACTACGGATTAATTTGCTTGAAGAGCCAGATTAATCTTTTTACTTTCACTTTCCTTCAGATTCTAACCTTGTTCGAATAATATATCATGGACGACTTGATTCTCAACACATATACGAGTTAATGATTCTTGAACTTGAAGGGAACTTTTTGCTATTCTAGCTCCGTGTTCAAGCTCGGCGGAATCTTTGTCATAATCCATCAACTTAACTTACGTTTAACATGTATCAGAATAGGACTGTGACCTATAGATTTTCAAGTTCACAAGTGAGACATTAGGTTGATTTTACAATATTTAGCCATCATAATTGTGTCTTTCAGCCTCTGCCGCCTGTTACGAGCTATACATTAGAGACCATTGGACCACTTGCCTCAACAAAGGATGGTGTATATCTTGCAGGTGGAACTCATTCAGGAAATATTCATCTTTGGGAGGTCTGTAATTCTCTGCCATTCTCATATTTTACATTCAGCAAAGCAATTTTGTATTTTACTTTAGTTTCTGTATGCATATACATATATGTTTGTATTTATGCACGTGAGTATGCGCTTATGTACATACACTTGCTGAAGAACTTTAAGTTCTCTTTTCCCTATTTTCTCTTGAGTCTCATTTATTTGTAGGTTGGTAGTGGGGAACTGCTCAAGCTTTGGAGTGGTCATCATAAACCTGTAAAGTGTGTCCTATTTTCTTGGGACGATTCATTTCTCATTACTGGTTCATCTGACGGAATGATTTGTGTCTGGTCCATGATTAGGTAAATGACTCTTGAGTCTTCACAATGCGTTTATTGAACCGCTTTGATGAAATCATTTGAGATAGCCTTTGGTTTTTGTTTCATGATTTTCATATCAATCTTGATGCAAGTTTGTTGGATGTGGAACTTGTGGGAAACTCACAGCCAATAGTGTATTGTCTCATGGAACATAATTCTTCTTTAACTGGTCTACTCACCATGTCTGGCTGCTCGATGTCGATAATCATTTCAAGCTCCCTCGATGGCAGTTTAAAGGTTGCTAACAGTAACAATGTATCTATTATTTGGTGTTGAGTTCTAATAAATTTATGACTTGATTAAACATTTTGCGTTTGCAGTTTTGGGACTTAATGTCAGGAATGATCAGGGGAACTCAAGCTCATATAGAGGGGATCACCGCAATTGTTCTTCATCCAACTGAGCAAGTTCTGTTCTCTGGCACTGTTGACGGGCAAATTTTTGCTAGCAGGCTTGAATTTGGATTTGATAACTGCATTACCATTAGAGAAAATCAAATACTTGCACCAAAAGGACACAAGTAATATATGGTACTTGAAAGTTCTCTGTAGTAGTTGCAATATGACTTTCCCTTTTTGTTATCTTGCATTGTTCTATATTTTTTTATGACTTTTCAAGCAAGGAAAATGTGTTGTCCATTGAAATCATCTCCCTCTAAACTTCATCAGCAGAACAACTTTACTAGTTATGACCATTTTGCAACTTCTTGTTTCTTTCCCCTGACCAATAATTAATATACATGTTGCAAGCCCATAGTAAGTTTATGTTCGTGTTTCCACCATTAATGCAGAGGAGCTATTACTGCTCTGGCTTTTAGTCAGATGTATCTAATTTCTGCATCCGAGGATTGTACTGTTTGCATAAGGGACATCAGCAGTCAGAGGATCATACAAAAGCTTGACCATAAAAAAGGTAATAACTTAATAAATGAACTGCTGTCTGATTAGGATCCTTCTTGCCTTTGAAGATTTGAAAACCATATTGGGTTGTACCTGTATAGTTCTGGAAACTTGATCGATGATGGAAATGATTGTTTCAAGAGAGGTTAATTTTGTTTTCTTCATCATTGCCATACGACAGTGAAGCATAGACAAACAATTTTCCTCTTCAATAATTTTATTTGGAATATCTGAACATGCATCGTATTGTTGTTTTTTGGCCGTTAACAGGGAGAATAACCAATTTGGTAGCAATTCCGCGGTCGTCCTTAATCTCTACGTCAAATCGTAAGAGAGTCTCGAATCAATCCTCCATGTCCTCACTCGACAAGTATCCTCAGCCTGCCAACTTGATGAAGAGCACGATTCCTCTCTTTTCATCCATCCAACCGCTTGGGGAGAATCTGAATTCCATCAGATTCACAAGTACCAGCTCATTGAATCAACAAATACTTGATATGAAGGTCAATCTTTCCTTAAATCTTTCTACATTGTAGCCTCAATAATGGCTGCCAATAGTAATGCTAGTTAAGTCAGTTGGATTATAAAACACCGACGATATTATCAATATATTCATAATACTTTTCCATTGTATTCAGACAGAAGGGACATCAGCAGCAATACAGATGAAAGTAGAAACAAGCTTAGAAAGGCGAATGTGGGCGTCCAGAATGACAAAGGAAGTGATGGACATGAATAACCATCTTCAATCAAGGTTACTAGACATGATGCGGATTCGATTGTTCGAGCCTGCAAAAATTAGCTCGTCCTCAAAGAAACAAAAAGATGAAAGAGATCGAGTTGCAAAGAAGAGGGAGAAGCGTACATTGTCATTCCATTAATCTTTCGATCTTGAACCAACTGTAAGTGATATAATTTTGTCATATTTGTAAGGTAAGGTAAGATGTTTTTTTTCTAAATGTTTTTACTATTTAATCAACTGTAAGGGATGATTTTAAAAATGGTGCTCGGTTCGATAAGGATA

mRNA sequence

ATGGCAGTTTTTTTTTTTGAGCATCAGAAAATGGGCAATGGCGGCGAAAGTATGGCGTTGGCTGTTTGCAGCGATAGAAACATGGGATTAGGGATTACTATTTGGGATGTGAAAACAGGCCAAACTCTCCTTCACATTCCGACTTGCGCTTCGCCTCCCTACGGCTTCATTTGCTTGAGAAACGAGTTCTTTGTTGCTTCTCAGACTCGTAAGGAAGGGTCCGTTGGTGGTGGATCCATTTTCATTTGGTCACTCAACAAGGTATTCTACTACGGATTAATTTGCTTGAAGAGCCAGATTAATCTTTTTACTTTCACTTTCCTTCAGATTCTAACCTTCTCCGTGTTCAAGCTCGGCGGAATCTTTCCTCTGCCGCCTGTTACGAGCTATACATTAGAGACCATTGGACCACTTGCCTCAACAAAGGATGGTGTATATCTTGCAGGTGGAACTCATTCAGGAAATATTCATCTTTGGGAGGTTGGTAGTGGGGAACTGCTCAAGCTTTGGAGTGGTCATCATAAACCTGTAAAGTGTGTCCTATTTTCTTGGGACGATTCATTTCTCATTACTGGTTCATCTGACGGAATGATTTGTGTCTGGTCCATGATTAGCCTTTGGTTTTTGTTTCATGATTTTCATATCAATCTTGATGCAAGTTTGTTGGATGTGGAACTTGTGGGAAACTCACAGCCAATAGTGTATTGTCTCATGGAACATAATTCTTCTTTAACTGGTCTACTCACCATGTCTGGCTGCTCGATGTCGATAATCATTTCAAGCTCCCTCGATGGCAGTTTAAAGTTTTGGGACTTAATGTCAGGAATGATCAGGGGAACTCAAGCTCATATAGAGGGGATCACCGCAATTGTTCTTCATCCAACTGAGCAAGTTCTGTTCTCTGGCACTGTTGACGGGCAAATTTTTGCTAGCAGGCTTGAATTTGGATTTGATAACTGCATTACCATTAGAGAAAATCAAATACTTGCACCAAAAGGACACAAAGGAGCTATTACTGCTCTGGCTTTTAGTCAGATGTATCTAATTTCTGCATCCGAGGATTGTACTGTTTGCATAAGGGACATCAGCAGTCAGAGGATCATACAAAAGCTTGACCATAAAAAAGGGAGAATAACCAATTTGGTAGCAATTCCGCGGTCGTCCTTAATCTCTACGTCAAATCGTAAGAGAGTCTCGAATCAATCCTCCATGTCCTCACTCGACAAGTATCCTCAGCCTGCCAACTTGATGAAGAGCACGATTCCTCTCTTTTCATCCATCCAACCGCTTGGGGAGAATCTGAATTCCATCAGATTCACAAGTACCAGCTCATTGAATCAACAAATACTTGATATGAAGACAGAAGGGACATCAGCAGCAATACAGATGAAAGTAGAAACAAGCTTAGAAAGGCGAATGTGGGCGTCCAGAATGACAAAGGAAGTGATGGACATGAATAACCATCTTCAATCAAGGTTACTAGACATGATGCGGATTCGATTGTTCGAGCCTGCAAAAATTAGCTCGTCCTCAAAGAAACAAAAAGATGAAAGAGATCGAGTTGCAAAGAAGAGGGAGAAGCGTACATTGTCATTCCATTAATCTTTCGATCTTGAACCAACTGTAAGTGATATAATTTTGTCATATTTGTAAGGTAAGGTAAGATGTTTTTTTTCTAAATGTTTTTACTATTTAATCAACTGTAAGGGATGATTTTAAAAATGGTGCTCGGTTCGATAAGGATA

Coding sequence (CDS)

ATGGCAGTTTTTTTTTTTGAGCATCAGAAAATGGGCAATGGCGGCGAAAGTATGGCGTTGGCTGTTTGCAGCGATAGAAACATGGGATTAGGGATTACTATTTGGGATGTGAAAACAGGCCAAACTCTCCTTCACATTCCGACTTGCGCTTCGCCTCCCTACGGCTTCATTTGCTTGAGAAACGAGTTCTTTGTTGCTTCTCAGACTCGTAAGGAAGGGTCCGTTGGTGGTGGATCCATTTTCATTTGGTCACTCAACAAGGTATTCTACTACGGATTAATTTGCTTGAAGAGCCAGATTAATCTTTTTACTTTCACTTTCCTTCAGATTCTAACCTTCTCCGTGTTCAAGCTCGGCGGAATCTTTCCTCTGCCGCCTGTTACGAGCTATACATTAGAGACCATTGGACCACTTGCCTCAACAAAGGATGGTGTATATCTTGCAGGTGGAACTCATTCAGGAAATATTCATCTTTGGGAGGTTGGTAGTGGGGAACTGCTCAAGCTTTGGAGTGGTCATCATAAACCTGTAAAGTGTGTCCTATTTTCTTGGGACGATTCATTTCTCATTACTGGTTCATCTGACGGAATGATTTGTGTCTGGTCCATGATTAGCCTTTGGTTTTTGTTTCATGATTTTCATATCAATCTTGATGCAAGTTTGTTGGATGTGGAACTTGTGGGAAACTCACAGCCAATAGTGTATTGTCTCATGGAACATAATTCTTCTTTAACTGGTCTACTCACCATGTCTGGCTGCTCGATGTCGATAATCATTTCAAGCTCCCTCGATGGCAGTTTAAAGTTTTGGGACTTAATGTCAGGAATGATCAGGGGAACTCAAGCTCATATAGAGGGGATCACCGCAATTGTTCTTCATCCAACTGAGCAAGTTCTGTTCTCTGGCACTGTTGACGGGCAAATTTTTGCTAGCAGGCTTGAATTTGGATTTGATAACTGCATTACCATTAGAGAAAATCAAATACTTGCACCAAAAGGACACAAAGGAGCTATTACTGCTCTGGCTTTTAGTCAGATGTATCTAATTTCTGCATCCGAGGATTGTACTGTTTGCATAAGGGACATCAGCAGTCAGAGGATCATACAAAAGCTTGACCATAAAAAAGGGAGAATAACCAATTTGGTAGCAATTCCGCGGTCGTCCTTAATCTCTACGTCAAATCGTAAGAGAGTCTCGAATCAATCCTCCATGTCCTCACTCGACAAGTATCCTCAGCCTGCCAACTTGATGAAGAGCACGATTCCTCTCTTTTCATCCATCCAACCGCTTGGGGAGAATCTGAATTCCATCAGATTCACAAGTACCAGCTCATTGAATCAACAAATACTTGATATGAAGACAGAAGGGACATCAGCAGCAATACAGATGAAAGTAGAAACAAGCTTAGAAAGGCGAATGTGGGCGTCCAGAATGACAAAGGAAGTGATGGACATGAATAACCATCTTCAATCAAGGTTACTAGACATGATGCGGATTCGATTGTTCGAGCCTGCAAAAATTAGCTCGTCCTCAAAGAAACAAAAAGATGAAAGAGATCGAGTTGCAAAGAAGAGGGAGAAGCGTACATTGTCATTCCATTAA

Protein sequence

MAVFFFEHQKMGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVASQTRKEGSVGGGSIFIWSLNKVFYYGLICLKSQINLFTFTFLQILTFSVFKLGGIFPLPPVTSYTLETIGPLASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISLWFLFHDFHINLDASLLDVELVGNSQPIVYCLMEHNSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLFSGTVDGQIFASRLEFGFDNCITIRENQILAPKGHKGAITALAFSQMYLISASEDCTVCIRDISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVSNQSSMSSLDKYPQPANLMKSTIPLFSSIQPLGENLNSIRFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTKEVMDMNNHLQSRLLDMMRIRLFEPAKISSSSKKQKDERDRVAKKREKRTLSFH

Homology

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BLAST of CsGy1G009490 vs. NCBI nr
Match: KGN64400.1 (hypothetical protein Csa_1G050390 [Cucumis sativus])

HSP 1 Score: 904.8 bits (2337), Expect = 1.4e-259
Identity = 473/523 (90.44%), Postives = 473/523 (90.44%), Query Frame = 0


Query: 11  MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVASQTR 70
           MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVASQTR
Sbjct: 1   MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVASQTR 60

Query: 71  KEGSVGGGSIFIWSLNKVFYYGLICLKSQINLFTFTFLQILTFSVFKLGGIFPLPPVTSY 130
           KEGSVGGGSIFIWSLNK                                   PLPPVTSY
Sbjct: 61  KEGSVGGGSIFIWSLNK-----------------------------------PLPPVTSY 120

Query: 131 TLETIGPLASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGHHKPVKCVLFSWDDSFLI 190
           TLETIGPLASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGHHKPVKCVLFSWDDSFLI
Sbjct: 121 TLETIGPLASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGHHKPVKCVLFSWDDSFLI 180

Query: 191 TGSSDGMICVWSMISLWFLFHDFHINLDASLLDVELVGNSQPIVYCLMEHNSSLTGLLTM 250
           TGSSDGMICVWSMI               SLLDVELVGNSQPIVYCLMEHNSSLTGLLTM
Sbjct: 181 TGSSDGMICVWSMI---------------SLLDVELVGNSQPIVYCLMEHNSSLTGLLTM 240

Query: 251 SGCSMSIIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLFSGTVDGQIFA 310
           SGCSMSIIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLFSGTVDGQIFA
Sbjct: 241 SGCSMSIIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLFSGTVDGQIFA 300

Query: 311 SRLEFGFDNCITIRENQILAPKGHKGAITALAFSQMYLISASEDCTVCIRDISSQRIIQK 370
           SRLEFGFDNCITIRENQILAPKGHKGAITALAFSQMYLISASEDCTVCIRDISSQRIIQK
Sbjct: 301 SRLEFGFDNCITIRENQILAPKGHKGAITALAFSQMYLISASEDCTVCIRDISSQRIIQK 360

Query: 371 LDHKKGRITNLVAIPRSSLISTSNRKRVSNQSSMSSLDKYPQPANLMKSTIPLFSSIQPL 430
           LDHKKGRITNLVAIPRSSLISTSNRKRVSNQSSMSSLDKYPQPANLMKSTIPLFSSIQPL
Sbjct: 361 LDHKKGRITNLVAIPRSSLISTSNRKRVSNQSSMSSLDKYPQPANLMKSTIPLFSSIQPL 420

Query: 431 GENLNSIRFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTKEVMDMNNHLQ 490
           GENLNSIRFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTKEVMDMNNHLQ
Sbjct: 421 GENLNSIRFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTKEVMDMNNHLQ 473

Query: 491 SRLLDMMRIRLFEPAKISSSSKKQKDERDRVAKKREKRTLSFH 534
           SRLLDMMRIRLFEPAKISSSSKKQKDERDRVAKKREKRTLSFH
Sbjct: 481 SRLLDMMRIRLFEPAKISSSSKKQKDERDRVAKKREKRTLSFH 473

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BLAST of CsGy1G009490 vs. NCBI nr
Match: XP_016899511.1 (PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like isoform X2 [Cucumis melo])

HSP 1 Score: 852.8 bits (2202), Expect = 6.2e-244
Identity = 450/540 (83.33%), Postives = 462/540 (85.56%), Query Frame = 0


Query: 1   MAVF-------FFEHQKMGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPTCASPP 60
           MAVF        FEHQKMGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIP+CASPP
Sbjct: 1   MAVFIYFFCFHLFEHQKMGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPSCASPP 60

Query: 61  YGFICLRNEFFVASQTRKEGSVGGGSIFIWSLNKVFYYGLICLKSQINLFTFTFLQILTF 120
           YGFICLRNEFFVASQTRKEGSVGGG+IFIWSLNK                          
Sbjct: 61  YGFICLRNEFFVASQTRKEGSVGGGTIFIWSLNK-------------------------- 120

Query: 121 SVFKLGGIFPLPPVTSYTLETIGPLASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGH 180
                    P PPV SYTLETIGPLASTKD VYLAGGTHSGNIHLWEVGSG+LLKLWSGH
Sbjct: 121 ---------PQPPVMSYTLETIGPLASTKDSVYLAGGTHSGNIHLWEVGSGKLLKLWSGH 180

Query: 181 HKPVKCVLFSWDDSFLITGSSDGMICVWSMISLWFLFHDFHINLDASLLDVELVGNSQPI 240
           HKPVKCVLFSWDDSFLITGSSDGMICVWSMI               SLLDVELV NSQP+
Sbjct: 181 HKPVKCVLFSWDDSFLITGSSDGMICVWSMI---------------SLLDVELVENSQPL 240

Query: 241 VYCLMEHNSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLH 300
           VYCLM+H SSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMI+GTQAHIEGITAIVLH
Sbjct: 241 VYCLMQHKSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIKGTQAHIEGITAIVLH 300

Query: 301 PTEQVLFSGTVDGQIFASRLEFGFDNCITIRENQILAPKGHKGAITALAFSQMYLISASE 360
           PTEQVLFSGTVDGQI ASRLE GFDNCIT++ENQILAPKGHKGAITALAFSQ  LISASE
Sbjct: 301 PTEQVLFSGTVDGQISASRLELGFDNCITVKENQILAPKGHKGAITALAFSQTDLISASE 360

Query: 361 DCTVCIRDISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVSNQSSMSSLDKYPQP 420
           DCTVCI DIS QRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRV NQ SMSSLDKYPQP
Sbjct: 361 DCTVCIWDISRQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNQFSMSSLDKYPQP 420

Query: 421 ANLMKSTIPLFSSIQPLGENLNSIRFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRM 480
           ANLMKSTIPLFSS+QPL ENLNSI FTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRM
Sbjct: 421 ANLMKSTIPLFSSLQPLQENLNSIGFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRM 480

Query: 481 WASRMTKEVMDMNNHLQSRLLDMMRIRLFEPAKISSSSKKQKDERDRVAKKREKRTLSFH 534
           WASRMTK+VMDMNNHLQSR+LDMMRIRLFEP KI+SSSKKQKDERDRVAKK EK   SFH
Sbjct: 481 WASRMTKQVMDMNNHLQSRVLDMMRIRLFEPTKINSSSKKQKDERDRVAKKMEKLPSSFH 490

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BLAST of CsGy1G009490 vs. NCBI nr
Match: XP_016899510.1 (PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like isoform X1 [Cucumis melo])

HSP 1 Score: 845.5 bits (2183), Expect = 9.8e-242
Identity = 443/526 (84.22%), Postives = 456/526 (86.69%), Query Frame = 0


Query: 8   HQKMGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVAS 67
           +QKMGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIP+CASPPYGFICLRNEFFVAS
Sbjct: 88  NQKMGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPSCASPPYGFICLRNEFFVAS 147

Query: 68  QTRKEGSVGGGSIFIWSLNKVFYYGLICLKSQINLFTFTFLQILTFSVFKLGGIFPLPPV 127
           QTRKEGSVGGG+IFIWSLNK                                   P PPV
Sbjct: 148 QTRKEGSVGGGTIFIWSLNK-----------------------------------PQPPV 207

Query: 128 TSYTLETIGPLASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGHHKPVKCVLFSWDDS 187
            SYTLETIGPLASTKD VYLAGGTHSGNIHLWEVGSG+LLKLWSGHHKPVKCVLFSWDDS
Sbjct: 208 MSYTLETIGPLASTKDSVYLAGGTHSGNIHLWEVGSGKLLKLWSGHHKPVKCVLFSWDDS 267

Query: 188 FLITGSSDGMICVWSMISLWFLFHDFHINLDASLLDVELVGNSQPIVYCLMEHNSSLTGL 247
           FLITGSSDGMICVWSMI               SLLDVELV NSQP+VYCLM+H SSLTGL
Sbjct: 268 FLITGSSDGMICVWSMI---------------SLLDVELVENSQPLVYCLMQHKSSLTGL 327

Query: 248 LTMSGCSMSIIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLFSGTVDGQ 307
           LTMSGCSMSIIISSSLDGSLKFWDLMSGMI+GTQAHIEGITAIVLHPTEQVLFSGTVDGQ
Sbjct: 328 LTMSGCSMSIIISSSLDGSLKFWDLMSGMIKGTQAHIEGITAIVLHPTEQVLFSGTVDGQ 387

Query: 308 IFASRLEFGFDNCITIRENQILAPKGHKGAITALAFSQMYLISASEDCTVCIRDISSQRI 367
           I ASRLE GFDNCIT++ENQILAPKGHKGAITALAFSQ  LISASEDCTVCI DIS QRI
Sbjct: 388 ISASRLELGFDNCITVKENQILAPKGHKGAITALAFSQTDLISASEDCTVCIWDISRQRI 447

Query: 368 IQKLDHKKGRITNLVAIPRSSLISTSNRKRVSNQSSMSSLDKYPQPANLMKSTIPLFSSI 427
           IQKLDHKKGRITNLVAIPRSSLISTSNRKRV NQ SMSSLDKYPQPANLMKSTIPLFSS+
Sbjct: 448 IQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNQFSMSSLDKYPQPANLMKSTIPLFSSL 507

Query: 428 QPLGENLNSIRFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTKEVMDMNN 487
           QPL ENLNSI FTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTK+VMDMNN
Sbjct: 508 QPLQENLNSIGFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTKQVMDMNN 563

Query: 488 HLQSRLLDMMRIRLFEPAKISSSSKKQKDERDRVAKKREKRTLSFH 534
           HLQSR+LDMMRIRLFEP KI+SSSKKQKDERDRVAKK EK   SFH
Sbjct: 568 HLQSRVLDMMRIRLFEPTKINSSSKKQKDERDRVAKKMEKLPSSFH 563

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BLAST of CsGy1G009490 vs. NCBI nr
Match: XP_022137407.1 (protein ROOT INITIATION DEFECTIVE 3-like isoform X1 [Momordica charantia])

HSP 1 Score: 735.3 bits (1897), Expect = 1.4e-208
Identity = 387/527 (73.43%), Postives = 423/527 (80.27%), Query Frame = 0


Query: 7   EHQKMGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVA 66
           E ++MGNGGE  ALAVCSD+NMG GITIWDV+TG TLLHIPTCASPPYG ICLRNEF VA
Sbjct: 13  EPREMGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVA 72

Query: 67  SQTRKEGSVGGGSIFIWSLNKVFYYGLICLKSQINLFTFTFLQILTFSVFKLGGIFPLPP 126
           SQTRKEGSVGGGSIFIWSLNK                                   P PP
Sbjct: 73  SQTRKEGSVGGGSIFIWSLNK-----------------------------------PQPP 132

Query: 127 VTSYTLETIGPLASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGHHKPVKCVLFSWDD 186
           + SY LE IGPLASTKDGVYLAGG  SGNIHLWEVGSG+LLKLWSGH KP+KC+LFSWDD
Sbjct: 133 LRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGKLLKLWSGHRKPIKCILFSWDD 192

Query: 187 SFLITGSSDGMICVWSMISLWFLFHDFHINLDASLLDVELVGNSQPIVYCLMEHNSSLTG 246
           SFLITGS+DGMICVWSMI                LLDVE   +SQPI+YCLMEH SSLTG
Sbjct: 193 SFLITGSADGMICVWSMI---------------CLLDVEHERSSQPILYCLMEHKSSLTG 252

Query: 247 LLTMSGCSMSIIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLFSGTVDG 306
           LL MS C+ SIIISSSLDGSLKFWDL+SGMI G+QAH EGITAIVLHPTEQ+LFSG+VDG
Sbjct: 253 LLAMSVCT-SIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLFSGSVDG 312

Query: 307 QIFASRLEFGFDNCITIRENQILAPKGHKGAITALAFSQMYLISASEDCTVCIRDISSQR 366
           QIFAS+LEFG DNCI +++NQ+LAPKGHKGAITALAFS+M LIS SEDCTVCI DISSQR
Sbjct: 313 QIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSRMDLISTSEDCTVCIWDISSQR 372

Query: 367 IIQKLDHKKGRITNLVAIPRSSLISTSNRKRVSNQSSMSSLDKYPQPANLMKSTIPLFSS 426
           IIQKLDHKKGRITNLVAIP  SLIS SNRKR  N  S+SSLDKYPQPANL+ STIPLF  
Sbjct: 373 IIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVSSLDKYPQPANLLNSTIPLFPP 432

Query: 427 IQPLGENLNSIRFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTKEVMDMN 486
           + PL EN NSIRF+S  SLNQQI DMKTEGTSAAIQMKVETSLE +MWASR+TK+VM+MN
Sbjct: 433 LHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVETSLESQMWASRITKQVMEMN 488

Query: 487 NHLQSRLLDMMRIRLFEPAKISSSSKKQKDERDRVAKKREKRTLSFH 534
           NHLQSRLLDMMRIRLF+ AK++S +KK K +RDRVA  REK+  SFH
Sbjct: 493 NHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMREKQPSSFH 488

[Close]

BLAST of CsGy1G009490 vs. NCBI nr
Match: XP_022954958.1 (protein ROOT INITIATION DEFECTIVE 3-like [Cucurbita moschata])

HSP 1 Score: 713.8 bits (1841), Expect = 4.5e-202
Identity = 378/524 (72.14%), Postives = 412/524 (78.63%), Query Frame = 0


Query: 11  MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVASQTR 70
           M N GE+MALAVCSD+NMG GITIWD KTG+TLLHIPTCASP YG I LRNEF VASQTR
Sbjct: 1   MSNVGETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTR 60

Query: 71  KEGSVGGGSIFIWSLNKVFYYGLICLKSQINLFTFTFLQILTFSVFKLGGIFPLPPVTSY 130
           KEGSVGGGS+F+WSL+K                                   P  P+ SY
Sbjct: 61  KEGSVGGGSMFVWSLSK-----------------------------------PQSPLRSY 120

Query: 131 TLETIGPLASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGHHKPVKCVLFSWDDSFLI 190
            LE IGPLASTKDG YLAGG HSGNIHLWEVGSG+LLKLWSGHHKP+K +LFSWDDSFLI
Sbjct: 121 PLEPIGPLASTKDGAYLAGGAHSGNIHLWEVGSGKLLKLWSGHHKPIKFILFSWDDSFLI 180

Query: 191 TGSSDGMICVWSMISLWFLFHDFHINLDASLLDVELVGNSQPIVYCLMEHNSSLTGLLTM 250
           TGS+DGMICVWSMI               SLLDVELVG++QPI+YCLMEH SSLTGL+TM
Sbjct: 181 TGSADGMICVWSMI---------------SLLDVELVGSAQPILYCLMEHKSSLTGLITM 240

Query: 251 SGCSMSIIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLFSGTVDGQIFA 310
           SG SMS+IISSSLDGSLKFWDLMSGMIRGTQ H+EGIT IVLHPTEQ LFSGTVDG+IFA
Sbjct: 241 SGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHVEGITEIVLHPTEQFLFSGTVDGKIFA 300

Query: 311 SRLEFGFDNCITIRENQILAPKGHKGAITALAFSQMYLISASEDCTVCIRDISSQRIIQK 370
           SRLEFG DNCITI+E+Q+ A  GHKGAITALAFSQM L+SASEDCTVCI DI SQRIIQK
Sbjct: 301 SRLEFGLDNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIWDIDSQRIIQK 360

Query: 371 LDHKKGRITNLVAIPRSS-LISTSNRKRVSNQSSMSSLDKYPQPANLMKSTIPLFSSIQP 430
           LDHKKGRITNLVA+PRSS LISTSNRKRV  Q      DKYPQPANL  STIPLF S +P
Sbjct: 361 LDHKKGRITNLVAVPRSSLLISTSNRKRVLKQ-----FDKYPQPANLSTSTIPLFPSSRP 420

Query: 431 LGENLNSIRFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTKEVMDMNNHL 490
           LGEN N + FTS  SLNQQI DMKTEGTSAAIQMKV+T L+ RMWASRMTK+VM+MNNHL
Sbjct: 421 LGENPNLVGFTSAGSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMTKQVMEMNNHL 461

Query: 491 QSRLLDMMRIRLFEPAKISSSSKKQKDERDRVAKKREKRTLSFH 534
           QS+LLDMM+ RLF         KK+KD+RDRVA+ REK  LSFH
Sbjct: 481 QSKLLDMMQTRLF--------PKKRKDQRDRVARTREKHPLSFH 461

[Close]

BLAST of CsGy1G009490 vs. TAIR10
Match: AT3G49180.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 188.7 bits (478), Expect = 9.1e-48
Identity = 147/464 (31.68%), Postives = 217/464 (46.77%), Query Frame = 0


Query: 18  MALAVCSDRNMGLGITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVASQTRKEGSVGG 77
           M + V +  ++  GI  WD+KTG   L    CASP +G   +  +F  +SQ     +   
Sbjct: 1   MEITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNT--S 60

Query: 78  GSIFIWSLNKVFYYGLICLKSQINLFTFTFLQILTFSVFKLGGIFPLPPVTSYTLETIGP 137
           GSIF WS  K                                   P   V SY +E I  
Sbjct: 61  GSIFYWSWTK-----------------------------------PQAEVKSYPVEPIKA 120

Query: 138 LASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGHHKPVKCVLFSWDDSFLITGSSDGM 197
           LA+  +G YL GG  SG+I+LWEV +G+LLK W GH++ V C++FS DDS L++GS DG 
Sbjct: 121 LAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGS 180

Query: 198 ICVWSMISLWFLFHDFHINLDASLLDVELVGNSQPIVYCLMEHNSSLTGLLTMSGCSMSI 257
           I VWS+I    LF DF      +L +           +   EH  S+T ++   G   ++
Sbjct: 181 IRVWSLIR---LFDDFQRQQGNTLYE-----------HNFNEHTMSVTDIVIDYGGCNAV 240

Query: 258 IISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLFSGTVDGQIFASRLEFGF 317
           IISSS D + K W L  G +         I A+ L P   V ++G  D +I+      G 
Sbjct: 241 IISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKIY-----IGA 300

Query: 318 DNCITIRENQILAPKGHKG-AITALAF--SQMYLISASEDCTVCIRDISSQRIIQKLDHK 377
            N  +    Q+L     KG AIT LA+      LIS SED  VC+ D  S R ++ L H 
Sbjct: 301 INATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDPKSLRHVRTLIHA 360

Query: 378 KGR---ITNLVAIPRSSLISTSNRKRVSNQSSMS----SLDKYPQPA-----NLMKSTIP 437
           KG      N + I R ++++ SN+ +VS +S  +     L+KY +P       ++    P
Sbjct: 361 KGSRKGPVNNIQIVRKTIVANSNKTQVSWKSRGALIPPPLEKYERPVEDTMDGIVTVDPP 401

Query: 438 LFSSIQPLGENLNSIRFTSTSSLNQQILDMKTEGTSAAIQMKVE 467
            FS +           F S   +++Q+ +++ +G SAA +M++E
Sbjct: 421 PFSDVPVYSS------FLSADLIDEQVKELQQQG-SAATEMEME 401

[Close]

BLAST of CsGy1G009490 vs. TAIR10
Match: AT2G33340.1 (MOS4-associated complex 3B)

HSP 1 Score: 51.6 bits (122), Expect = 1.7e-06
Identity = 48/214 (22.43%), Postives = 88/214 (41.12%), Query Frame = 0


Query: 147 LAGGTHSGNIHLWEVGSGELLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISL 206
           +A G       L++  SG++L   +GH K V  V F  D   ++T S+D  + +W     
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPG- 296

Query: 207 WFLFHDFHINLDASLLDVELVGNSQPIVYCLMEHNSSLTGLLTMSGCSMSIIISSSLDGS 266
                                  +    Y L +H++ +  +      +    +S+SLDG+
Sbjct: 297 ---------------------DGNYACGYTLNDHSAEVRAVTVHP--TNKYFVSASLDGT 356

Query: 267 LKFWDLMSG----MIRGTQAHIEGITAIVLHPTEQVLFSGTVDGQIFASRLEFGFDNCIT 326
             F+DL SG     +     +++  TA   HP   +L +GT    +    ++        
Sbjct: 357 WCFYDLSSGSCLAQVSDDSKNVD-YTAAAFHPDGLILGTGTSQSVVKIWDVK-------- 416

Query: 327 IRENQILAPKGHKGAITALAFSQ--MYLISASED 355
             +  +    GH G +TA++FS+   +L +A+ED
Sbjct: 417 -SQANVAKFDGHTGEVTAISFSENGYFLATAAED 416

[Close]

BLAST of CsGy1G009490 vs. TAIR10
Match: AT2G45540.2 (WD-40 repeat family protein / beige-related)

HSP 1 Score: 49.7 bits (117), Expect = 6.6e-06
Identity = 23/64 (35.94%), Postives = 34/64 (53.12%), Query Frame = 0


Query: 138  LASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGHHKPVKCVLFSWDDSFLITGSSDGM 197
            +A T DG  + GG    +I L      + L+   GH  PV C+  S D++FL+TGS D  
Sbjct: 2687 IAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDST 2746

Query: 198  ICVW 202
            + +W
Sbjct: 2747 VLLW 2750

[Close]

BLAST of CsGy1G009490 vs. TAIR10
Match: AT4G21130.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 48.1 bits (113), Expect = 1.9e-05
Identity = 22/65 (33.85%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 138 LASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGHHKPVKCVLFSWDDSFLITGSSDGM 197
           LA + DG YLA G    ++HLW++ + E ++ ++GH   V  + F    + L +GS DG 
Sbjct: 212 LAVSSDGRYLATGGVDCHVHLWDIRTREHVQAFTGHCGIVSSLCFREGTAELFSGSYDGT 271

Query: 198 ICVWS 203
           + +W+
Sbjct: 272 LSIWN 276

[Close]

BLAST of CsGy1G009490 vs. TAIR10
Match: AT1G04510.1 (MOS4-associated complex 3A)

HSP 1 Score: 47.8 bits (112), Expect = 2.5e-05
Identity = 47/210 (22.38%), Postives = 85/210 (40.48%), Query Frame = 0


Query: 158 LWEVGSGELLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISLWFLFHDFHINL 217
           L++  SG++L   +GH K V  + F  D   ++T SSD  + +W                
Sbjct: 248 LFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSE------------ 307

Query: 218 DASLLDVELVGNSQPIVYCLMEHNSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGM- 277
                       +    + L +H++ +  +   +  +    +S+SLD +  F+DL SG+ 
Sbjct: 308 ----------DGNYTSRHTLKDHSAEVRAVTVHA--TNKYFVSASLDSTWCFYDLSSGLC 367

Query: 278 ---IRGTQAHIEGITAIVLHPTEQVLFSGTV-------DGQIFASRLEFGFDNCITIREN 337
              +     +    TA   HP   +L +GT        D +  A+  +FG          
Sbjct: 368 LAQVTDASENDVNYTAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFG---------- 417

Query: 338 QILAPKGHKGAITALAFSQ--MYLISASED 355
                 GH G IT+++FS+   +L +A+ D
Sbjct: 428 ------GHNGEITSISFSENGYFLATAALD 417

[Close]

BLAST of CsGy1G009490 vs. Swiss-Prot
Match: sp|Q9M3B4|RID3_ARATH (Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.6e-46
Identity = 147/464 (31.68%), Postives = 217/464 (46.77%), Query Frame = 0


Query: 18  MALAVCSDRNMGLGITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVASQTRKEGSVGG 77
           M + V +  ++  GI  WD+KTG   L    CASP +G   +  +F  +SQ     +   
Sbjct: 1   MEITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNT--S 60

Query: 78  GSIFIWSLNKVFYYGLICLKSQINLFTFTFLQILTFSVFKLGGIFPLPPVTSYTLETIGP 137
           GSIF WS  K                                   P   V SY +E I  
Sbjct: 61  GSIFYWSWTK-----------------------------------PQAEVKSYPVEPIKA 120

Query: 138 LASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGHHKPVKCVLFSWDDSFLITGSSDGM 197
           LA+  +G YL GG  SG+I+LWEV +G+LLK W GH++ V C++FS DDS L++GS DG 
Sbjct: 121 LAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGS 180

Query: 198 ICVWSMISLWFLFHDFHINLDASLLDVELVGNSQPIVYCLMEHNSSLTGLLTMSGCSMSI 257
           I VWS+I    LF DF      +L +           +   EH  S+T ++   G   ++
Sbjct: 181 IRVWSLIR---LFDDFQRQQGNTLYE-----------HNFNEHTMSVTDIVIDYGGCNAV 240

Query: 258 IISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLFSGTVDGQIFASRLEFGF 317
           IISSS D + K W L  G +         I A+ L P   V ++G  D +I+      G 
Sbjct: 241 IISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKIY-----IGA 300

Query: 318 DNCITIRENQILAPKGHKG-AITALAF--SQMYLISASEDCTVCIRDISSQRIIQKLDHK 377
            N  +    Q+L     KG AIT LA+      LIS SED  VC+ D  S R ++ L H 
Sbjct: 301 INATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDPKSLRHVRTLIHA 360

Query: 378 KGR---ITNLVAIPRSSLISTSNRKRVSNQSSMS----SLDKYPQPA-----NLMKSTIP 437
           KG      N + I R ++++ SN+ +VS +S  +     L+KY +P       ++    P
Sbjct: 361 KGSRKGPVNNIQIVRKTIVANSNKTQVSWKSRGALIPPPLEKYERPVEDTMDGIVTVDPP 401

Query: 438 LFSSIQPLGENLNSIRFTSTSSLNQQILDMKTEGTSAAIQMKVE 467
            FS +           F S   +++Q+ +++ +G SAA +M++E
Sbjct: 421 PFSDVPVYSS------FLSADLIDEQVKELQQQG-SAATEMEME 401

[Close]

BLAST of CsGy1G009490 vs. Swiss-Prot
Match: sp|Q3SZD4|WDR18_BOVIN (WD repeat-containing protein 18 OS=Bos taurus OX=9913 GN=WDR18 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 6.9e-21
Identity = 99/382 (25.92%), Postives = 163/382 (42.67%), Query Frame = 0


Query: 18  MALAVCSDRNMGL-GITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVASQTRKEGSVG 77
           M +AVC+D    L    +W++ +G  LL      + P G   L  E+ +A+Q      +G
Sbjct: 5   MEVAVCTDSAAQLWSCVVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQ------LG 64

Query: 78  GGSIFIWSLNKVFYYGLICLKSQINLFTFTFLQILTFSVFKLGGIFPLPPVTSYTLETIG 137
              I  W L +         K Q+                    I    PVT        
Sbjct: 65  KNYICAWELQR---------KDQLQ-----------------QKIMCPGPVTC------- 124

Query: 138 PLASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGHHKPVKCVLFSWDDSFLITGSSDG 197
            L ++ +G+Y+  G  S NI+LWEV +G LL + S H++ V C+ F+ D S  I+G  D 
Sbjct: 125 -LTTSPNGLYVLAGI-SENIYLWEVSTGNLLVILSRHYQDVSCLQFTGDSSHFISGGKDC 184

Query: 198 MICVWSMISLWFLFHDFHINLDASLLDVELVGNSQPIVYCLMEHNSSLTGLLTMSGCSMS 257
           ++  WS+ S+        +  D S         +    +    H   +T L    G  ++
Sbjct: 185 LVLAWSLCSV--------LQADPS--------RTPAPRHVWSRHTLPITDLHCGFGGPLA 244

Query: 258 IIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLFSGTVDGQIFASRL--- 317
            + ++SLD ++K W++ SG +  +     GI A+ +   E  +F G  DG IF   L   
Sbjct: 245 RVATASLDQTVKLWEVSSGELLLSVLFDVGILAVTMDLAEHYMFCGGSDGSIFQVDLCTW 304

Query: 318 EFGFDNCITIRENQILAPKGHKGAITALAFSQ--MYLISASEDCTVCIRDISSQRIIQKL 377
               +      +      +GH+  +T L+ S     L+S S D TV + D+ SQ+ ++ +
Sbjct: 305 PGQREKSFQPEQEHGKVFRGHRNQVTCLSVSTDGSVLLSGSHDETVRLWDVQSQQCLRTV 328

Query: 378 DHKKGRITN--LVAIPRSSLIS 392
              KG +TN  ++  P S L S
Sbjct: 365 T-LKGPVTNACIMLAPVSMLSS 328

[Close]

BLAST of CsGy1G009490 vs. Swiss-Prot
Match: sp|Q9BV38|WDR18_HUMAN (WD repeat-containing protein 18 OS=Homo sapiens OX=9606 GN=WDR18 PE=1 SV=2)

HSP 1 Score: 99.8 bits (247), Expect = 1.0e-19
Identity = 99/383 (25.85%), Postives = 166/383 (43.34%), Query Frame = 0


Query: 18  MALAVCSDRNMGL-GITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVASQTRKEGSVG 77
           M +AVC+D    +    +W++ +G  LL      + P G   L  E+ +A+Q      +G
Sbjct: 5   MEVAVCTDSAAPMWSCIVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQ------LG 64

Query: 78  GGSIFIWSLNKVFYYGLICLKSQINLFTFTFLQILTFSVFKLGGIFPLPPVTSYTLETIG 137
              I  W L +         K Q+                    I    PVT        
Sbjct: 65  KNYISAWELQR---------KDQLQ-----------------QKIMCPGPVTC------- 124

Query: 138 PLASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGHHKPVKCVLFSWDDSFLITGSSDG 197
            L ++ +G+Y+  G  + +IHLWEV +G LL + S H++ V C+ F+ D S  I+G  D 
Sbjct: 125 -LTASPNGLYVLAGV-AESIHLWEVSTGNLLVILSRHYQDVSCLQFTGDSSHFISGGKDC 184

Query: 198 MICVWSMISLWFLFHDFHINLDASLLDVELVGNSQPIVYCLMEHNSSLTGLLTMSGCSMS 257
           ++ VWS+ S+        +  D S +            +    H   +T L    G  ++
Sbjct: 185 LVLVWSLCSV--------LQADPSRIPAPR--------HVWSHHALPITDLHCGFGGPLA 244

Query: 258 IIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLFSGTVDGQIFASRLEFG 317
            + +SSLD ++K W++ SG +  +      I A+ +   E  +F G  +G IF   L F 
Sbjct: 245 RVATSSLDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLAEHHMFCGGSEGSIFQVDL-FT 304

Query: 318 F----DNCITIRENQILAPKGHKGAITALAFSQ--MYLISASEDCTVCIRDISSQRIIQK 377
           +    +      ++     KGH+  +T L+ S     L+S S D TV + D+ S++ I+ 
Sbjct: 305 WPGQRERSFHPEQDAGKVFKGHRNQVTCLSVSTDGSVLLSGSHDETVRLWDVQSKQCIRT 328

Query: 378 LDHKKGRITN--LVAIPRSSLIS 392
           +   KG +TN  ++  P S L S
Sbjct: 365 V-ALKGPVTNAAILLAPVSMLSS 328

[Close]

BLAST of CsGy1G009490 vs. Swiss-Prot
Match: sp|Q68EI0|WDR18_DANRE (WD repeat-containing protein 18 OS=Danio rerio OX=7955 GN=wdr18 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.3e-19
Identity = 72/255 (28.24%), Postives = 123/255 (48.24%), Query Frame = 0


Query: 138 LASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGHHKPVKCVLFSWDDSFLITGSSDGM 197
           L ++ DG+Y+  G     I+LWEV +G LL + S H + + C+ F+ D S  ++G  D +
Sbjct: 86  LCASPDGLYVLAGIAEA-IYLWEVSTGNLLAILSRHFQDLSCIKFTDDSSHFVSGGKDNL 145

Query: 198 ICVWSMISLWFLFHDFHINLDASLLDVELVGNSQPIVYCLMEHNSSLTGLLTMSGCSMSI 257
             +W++ S+        + LD+S         +    + L  H+  +T +        + 
Sbjct: 146 AFIWNLSSV--------VQLDSS--------RTPEPRHILSRHSLPITDIHCGLMGPQAR 205

Query: 258 IISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLFSGTVDGQIF-ASRLEFG 317
           + ++SLD ++K W++ SG +  +     GI ++   P E  LF G  DG IF  S     
Sbjct: 206 VATASLDQTVKVWEISSGEMLLSVLFDVGIMSVTFDPCEYFLFCGGSDGNIFQVSLCSTS 265

Query: 318 FDNCITIRE----NQILAPKGHKGAITALAFSQ--MYLISASEDCTVCIRDISSQRIIQK 377
                T +     NQ+   KGH+  +T L+ S     L+S S D TV + D+ S++ I  
Sbjct: 266 LSRDKTFQSDSEGNQVF--KGHRNLVTCLSVSMDGTVLLSGSNDETVRMWDVQSKQCIWT 320

Query: 378 LDHKKGRITNLVAIP 386
           ++H +G +TN   IP
Sbjct: 326 INH-RGPVTNAAIIP 320

[Close]

BLAST of CsGy1G009490 vs. Swiss-Prot
Match: sp|Q499N3|WDR18_RAT (WD repeat-containing protein 18 OS=Rattus norvegicus OX=10116 GN=Wdr18 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.1e-18
Identity = 91/369 (24.66%), Postives = 155/369 (42.01%), Query Frame = 0


Query: 18  MALAVCSDRNMGL-GITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVASQTRKEGSVG 77
           M + VC+D    L    +W++ +G  LL      + P G   L  E+ +A+Q       G
Sbjct: 5   MEVVVCTDSAAPLWSCMVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQQ------G 64

Query: 78  GGSIFIWSLNKVFYYGLICLKSQINLFTFTFLQILTFSVFKLGGIFPLPPVTSYTLETIG 137
              I  W L +         K Q+                    I    PVT        
Sbjct: 65  KNYICAWELQR---------KDQLQ-----------------QKIMCPGPVTC------- 124

Query: 138 PLASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGHHKPVKCVLFSWDDSFLITGSSDG 197
            L +  +G+Y+  G  + +I+LWEV +G LL + S H++ V C+ F+ D S  ++   D 
Sbjct: 125 -LTTAPNGLYVLAGI-AESIYLWEVSTGNLLVILSRHYQDVSCLKFTGDGSHFVSAGKDC 184

Query: 198 MICVWSMISLWFLFHDFHINLDASLLDVELVGNSQPIVYCLMEHNSSLTGLLTMSGCSMS 257
           ++  WS+ S+        +  D S +            +   +H   +T L    G  M+
Sbjct: 185 LVLAWSLCSV--------LQADPSRILAPR--------HVWSQHTLPITDLHCGFGGPMA 244

Query: 258 IIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLFSGTVDGQIFASRL--- 317
            + ++SLD ++K W + SG +  +     GIT++ +   E  +F G  DG IF   L   
Sbjct: 245 RVATASLDQTMKLWAISSGDLLLSVLFDMGITSVTMDLAEHYIFCGGSDGSIFQVDLCSR 304

Query: 318 EFGFDNCITIRENQILAPKGHKGAITALAFSQ--MYLISASEDCTVCIRDISSQRIIQKL 377
               +      +N     KGH+  +T L+ S     L+S S D +V + D+ S++ ++ +
Sbjct: 305 PGPREQSFQPEQNTGKVFKGHRNQVTCLSVSTDGSILLSGSHDESVRLWDVKSKQCVRTV 315

Query: 378 DHKKGRITN 381
              KG +TN
Sbjct: 365 P-LKGPVTN 315

[Close]

BLAST of CsGy1G009490 vs. TrEMBL
Match: tr|A0A0A0LR59|A0A0A0LR59_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050390 PE=4 SV=1)

HSP 1 Score: 904.8 bits (2337), Expect = 9.0e-260
Identity = 473/523 (90.44%), Postives = 473/523 (90.44%), Query Frame = 0


Query: 11  MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVASQTR 70
           MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVASQTR
Sbjct: 1   MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVASQTR 60

Query: 71  KEGSVGGGSIFIWSLNKVFYYGLICLKSQINLFTFTFLQILTFSVFKLGGIFPLPPVTSY 130
           KEGSVGGGSIFIWSLNK                                   PLPPVTSY
Sbjct: 61  KEGSVGGGSIFIWSLNK-----------------------------------PLPPVTSY 120

Query: 131 TLETIGPLASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGHHKPVKCVLFSWDDSFLI 190
           TLETIGPLASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGHHKPVKCVLFSWDDSFLI
Sbjct: 121 TLETIGPLASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGHHKPVKCVLFSWDDSFLI 180

Query: 191 TGSSDGMICVWSMISLWFLFHDFHINLDASLLDVELVGNSQPIVYCLMEHNSSLTGLLTM 250
           TGSSDGMICVWSMI               SLLDVELVGNSQPIVYCLMEHNSSLTGLLTM
Sbjct: 181 TGSSDGMICVWSMI---------------SLLDVELVGNSQPIVYCLMEHNSSLTGLLTM 240

Query: 251 SGCSMSIIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLFSGTVDGQIFA 310
           SGCSMSIIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLFSGTVDGQIFA
Sbjct: 241 SGCSMSIIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLFSGTVDGQIFA 300

Query: 311 SRLEFGFDNCITIRENQILAPKGHKGAITALAFSQMYLISASEDCTVCIRDISSQRIIQK 370
           SRLEFGFDNCITIRENQILAPKGHKGAITALAFSQMYLISASEDCTVCIRDISSQRIIQK
Sbjct: 301 SRLEFGFDNCITIRENQILAPKGHKGAITALAFSQMYLISASEDCTVCIRDISSQRIIQK 360

Query: 371 LDHKKGRITNLVAIPRSSLISTSNRKRVSNQSSMSSLDKYPQPANLMKSTIPLFSSIQPL 430
           LDHKKGRITNLVAIPRSSLISTSNRKRVSNQSSMSSLDKYPQPANLMKSTIPLFSSIQPL
Sbjct: 361 LDHKKGRITNLVAIPRSSLISTSNRKRVSNQSSMSSLDKYPQPANLMKSTIPLFSSIQPL 420

Query: 431 GENLNSIRFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTKEVMDMNNHLQ 490
           GENLNSIRFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTKEVMDMNNHLQ
Sbjct: 421 GENLNSIRFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTKEVMDMNNHLQ 473

Query: 491 SRLLDMMRIRLFEPAKISSSSKKQKDERDRVAKKREKRTLSFH 534
           SRLLDMMRIRLFEPAKISSSSKKQKDERDRVAKKREKRTLSFH
Sbjct: 481 SRLLDMMRIRLFEPAKISSSSKKQKDERDRVAKKREKRTLSFH 473

[Close]

BLAST of CsGy1G009490 vs. TrEMBL
Match: tr|A0A1S4DU43|A0A1S4DU43_CUCME (protein ROOT INITIATION DEFECTIVE 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484316 PE=4 SV=1)

HSP 1 Score: 852.8 bits (2202), Expect = 4.1e-244
Identity = 450/540 (83.33%), Postives = 462/540 (85.56%), Query Frame = 0


Query: 1   MAVF-------FFEHQKMGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPTCASPP 60
           MAVF        FEHQKMGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIP+CASPP
Sbjct: 1   MAVFIYFFCFHLFEHQKMGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPSCASPP 60

Query: 61  YGFICLRNEFFVASQTRKEGSVGGGSIFIWSLNKVFYYGLICLKSQINLFTFTFLQILTF 120
           YGFICLRNEFFVASQTRKEGSVGGG+IFIWSLNK                          
Sbjct: 61  YGFICLRNEFFVASQTRKEGSVGGGTIFIWSLNK-------------------------- 120

Query: 121 SVFKLGGIFPLPPVTSYTLETIGPLASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGH 180
                    P PPV SYTLETIGPLASTKD VYLAGGTHSGNIHLWEVGSG+LLKLWSGH
Sbjct: 121 ---------PQPPVMSYTLETIGPLASTKDSVYLAGGTHSGNIHLWEVGSGKLLKLWSGH 180

Query: 181 HKPVKCVLFSWDDSFLITGSSDGMICVWSMISLWFLFHDFHINLDASLLDVELVGNSQPI 240
           HKPVKCVLFSWDDSFLITGSSDGMICVWSMI               SLLDVELV NSQP+
Sbjct: 181 HKPVKCVLFSWDDSFLITGSSDGMICVWSMI---------------SLLDVELVENSQPL 240

Query: 241 VYCLMEHNSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLH 300
           VYCLM+H SSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMI+GTQAHIEGITAIVLH
Sbjct: 241 VYCLMQHKSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIKGTQAHIEGITAIVLH 300

Query: 301 PTEQVLFSGTVDGQIFASRLEFGFDNCITIRENQILAPKGHKGAITALAFSQMYLISASE 360
           PTEQVLFSGTVDGQI ASRLE GFDNCIT++ENQILAPKGHKGAITALAFSQ  LISASE
Sbjct: 301 PTEQVLFSGTVDGQISASRLELGFDNCITVKENQILAPKGHKGAITALAFSQTDLISASE 360

Query: 361 DCTVCIRDISSQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVSNQSSMSSLDKYPQP 420
           DCTVCI DIS QRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRV NQ SMSSLDKYPQP
Sbjct: 361 DCTVCIWDISRQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNQFSMSSLDKYPQP 420

Query: 421 ANLMKSTIPLFSSIQPLGENLNSIRFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRM 480
           ANLMKSTIPLFSS+QPL ENLNSI FTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRM
Sbjct: 421 ANLMKSTIPLFSSLQPLQENLNSIGFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRM 480

Query: 481 WASRMTKEVMDMNNHLQSRLLDMMRIRLFEPAKISSSSKKQKDERDRVAKKREKRTLSFH 534
           WASRMTK+VMDMNNHLQSR+LDMMRIRLFEP KI+SSSKKQKDERDRVAKK EK   SFH
Sbjct: 481 WASRMTKQVMDMNNHLQSRVLDMMRIRLFEPTKINSSSKKQKDERDRVAKKMEKLPSSFH 490

[Close]

BLAST of CsGy1G009490 vs. TrEMBL
Match: tr|A0A1S4DUX3|A0A1S4DUX3_CUCME (protein ROOT INITIATION DEFECTIVE 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484316 PE=4 SV=1)

HSP 1 Score: 845.5 bits (2183), Expect = 6.5e-242
Identity = 443/526 (84.22%), Postives = 456/526 (86.69%), Query Frame = 0


Query: 8   HQKMGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVAS 67
           +QKMGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIP+CASPPYGFICLRNEFFVAS
Sbjct: 88  NQKMGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPSCASPPYGFICLRNEFFVAS 147

Query: 68  QTRKEGSVGGGSIFIWSLNKVFYYGLICLKSQINLFTFTFLQILTFSVFKLGGIFPLPPV 127
           QTRKEGSVGGG+IFIWSLNK                                   P PPV
Sbjct: 148 QTRKEGSVGGGTIFIWSLNK-----------------------------------PQPPV 207

Query: 128 TSYTLETIGPLASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGHHKPVKCVLFSWDDS 187
            SYTLETIGPLASTKD VYLAGGTHSGNIHLWEVGSG+LLKLWSGHHKPVKCVLFSWDDS
Sbjct: 208 MSYTLETIGPLASTKDSVYLAGGTHSGNIHLWEVGSGKLLKLWSGHHKPVKCVLFSWDDS 267

Query: 188 FLITGSSDGMICVWSMISLWFLFHDFHINLDASLLDVELVGNSQPIVYCLMEHNSSLTGL 247
           FLITGSSDGMICVWSMI               SLLDVELV NSQP+VYCLM+H SSLTGL
Sbjct: 268 FLITGSSDGMICVWSMI---------------SLLDVELVENSQPLVYCLMQHKSSLTGL 327

Query: 248 LTMSGCSMSIIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLFSGTVDGQ 307
           LTMSGCSMSIIISSSLDGSLKFWDLMSGMI+GTQAHIEGITAIVLHPTEQVLFSGTVDGQ
Sbjct: 328 LTMSGCSMSIIISSSLDGSLKFWDLMSGMIKGTQAHIEGITAIVLHPTEQVLFSGTVDGQ 387

Query: 308 IFASRLEFGFDNCITIRENQILAPKGHKGAITALAFSQMYLISASEDCTVCIRDISSQRI 367
           I ASRLE GFDNCIT++ENQILAPKGHKGAITALAFSQ  LISASEDCTVCI DIS QRI
Sbjct: 388 ISASRLELGFDNCITVKENQILAPKGHKGAITALAFSQTDLISASEDCTVCIWDISRQRI 447

Query: 368 IQKLDHKKGRITNLVAIPRSSLISTSNRKRVSNQSSMSSLDKYPQPANLMKSTIPLFSSI 427
           IQKLDHKKGRITNLVAIPRSSLISTSNRKRV NQ SMSSLDKYPQPANLMKSTIPLFSS+
Sbjct: 448 IQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNQFSMSSLDKYPQPANLMKSTIPLFSSL 507

Query: 428 QPLGENLNSIRFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTKEVMDMNN 487
           QPL ENLNSI FTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTK+VMDMNN
Sbjct: 508 QPLQENLNSIGFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTKQVMDMNN 563

Query: 488 HLQSRLLDMMRIRLFEPAKISSSSKKQKDERDRVAKKREKRTLSFH 534
           HLQSR+LDMMRIRLFEP KI+SSSKKQKDERDRVAKK EK   SFH
Sbjct: 568 HLQSRVLDMMRIRLFEPTKINSSSKKQKDERDRVAKKMEKLPSSFH 563

[Close]

BLAST of CsGy1G009490 vs. TrEMBL
Match: tr|A0A1S4DU54|A0A1S4DU54_CUCME (protein ROOT INITIATION DEFECTIVE 3-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484316 PE=4 SV=1)

HSP 1 Score: 632.1 bits (1629), Expect = 1.1e-177
Identity = 355/526 (67.49%), Postives = 365/526 (69.39%), Query Frame = 0


Query: 8   HQKMGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVAS 67
           +QKMGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIP+CASPPYGFICLRNEFFVAS
Sbjct: 88  NQKMGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPSCASPPYGFICLRNEFFVAS 147

Query: 68  QTRKEGSVGGGSIFIWSLNKVFYYGLICLKSQINLFTFTFLQILTFSVFKLGGIFPLPPV 127
           QTRKEGSVGGG+IFIWSLNK                                   P PPV
Sbjct: 148 QTRKEGSVGGGTIFIWSLNK-----------------------------------PQPPV 207

Query: 128 TSYTLETIGPLASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGHHKPVKCVLFSWDDS 187
            SYTLETIGPLASTKD VYLAGGTHSGNIHLWE                           
Sbjct: 208 MSYTLETIGPLASTKDSVYLAGGTHSGNIHLWE--------------------------- 267

Query: 188 FLITGSSDGMICVWSMISLWFLFHDFHINLDASLLDVELVGNSQPIVYCLMEHNSSLTGL 247
                                                                       
Sbjct: 268 ------------------------------------------------------------ 327

Query: 248 LTMSGCSMSIIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLFSGTVDGQ 307
                                FWDLMSGMI+GTQAHIEGITAIVLHPTEQVLFSGTVDGQ
Sbjct: 328 ---------------------FWDLMSGMIKGTQAHIEGITAIVLHPTEQVLFSGTVDGQ 387

Query: 308 IFASRLEFGFDNCITIRENQILAPKGHKGAITALAFSQMYLISASEDCTVCIRDISSQRI 367
           I ASRLE GFDNCIT++ENQILAPKGHKGAITALAFSQ  LISASEDCTVCI DIS QRI
Sbjct: 388 ISASRLELGFDNCITVKENQILAPKGHKGAITALAFSQTDLISASEDCTVCIWDISRQRI 447

Query: 368 IQKLDHKKGRITNLVAIPRSSLISTSNRKRVSNQSSMSSLDKYPQPANLMKSTIPLFSSI 427
           IQKLDHKKGRITNLVAIPRSSLISTSNRKRV NQ SMSSLDKYPQPANLMKSTIPLFSS+
Sbjct: 448 IQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNQFSMSSLDKYPQPANLMKSTIPLFSSL 470

Query: 428 QPLGENLNSIRFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTKEVMDMNN 487
           QPL ENLNSI FTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTK+VMDMNN
Sbjct: 508 QPLQENLNSIGFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTKQVMDMNN 470

Query: 488 HLQSRLLDMMRIRLFEPAKISSSSKKQKDERDRVAKKREKRTLSFH 534
           HLQSR+LDMMRIRLFEP KI+SSSKKQKDERDRVAKK EK   SFH
Sbjct: 568 HLQSRVLDMMRIRLFEPTKINSSSKKQKDERDRVAKKMEKLPSSFH 470

[Close]

BLAST of CsGy1G009490 vs. TrEMBL
Match: tr|A0A251P8U7|A0A251P8U7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G153000 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 7.2e-132
Identity = 259/510 (50.78%), Postives = 326/510 (63.92%), Query Frame = 0


Query: 13  NGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVASQTRKE 72
           NG E  A+ VCSD++MG+GITIW + TG  LLHIPTCAS P+G +CLRN+F VASQ  K 
Sbjct: 4   NGSE--AVVVCSDKSMGIGITIWGIDTGDRLLHIPTCASAPHGLVCLRNQFLVASQIHKH 63

Query: 73  GSVGGGSIFIWSLNKVFYYGLICLKSQINLFTFTFLQILTFSVFKLGGIFPLPPVTSYTL 132
           GSVGGG+I +W LNK                                   P  P+ SY L
Sbjct: 64  GSVGGGAISMWPLNK-----------------------------------PQQPIRSYPL 123

Query: 133 ETIGPLASTKDGVYLAGGTHSGNIHLWEVGSGELLKLWSGHHKPVKCVLFSWDDSFLITG 192
           E IGPL+ TKDGVYLAGG  SGN++LWEV +G+LLK W GHH+ + C+LFS D S L++ 
Sbjct: 124 EAIGPLSCTKDGVYLAGGALSGNVYLWEVANGKLLKTWRGHHRSLNCMLFSDDGSLLVSA 183

Query: 193 SSDGMICVWSMISLWFLFHDFHINLDASLLDVELVGNSQPIVYCLMEHNSSLTGLLTMSG 252
           S DGMICVWSM+                LLD+E   +   +++  MEH SS+TGLLT SG
Sbjct: 184 SDDGMICVWSMV---------------GLLDMEDSQSFPSLLHYSMEHKSSITGLLTTSG 243

Query: 253 CSMSIIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLFSGTVDGQIFASR 312
            S  ++ISSSLDGS K WDL+ G +  TQ ++  ITA+VLHPTEQ+ FSG++DG+IF ++
Sbjct: 244 SSNVVLISSSLDGSCKVWDLVLGKLMQTQVYLLAITAVVLHPTEQLFFSGSIDGRIFVNK 303

Query: 313 LEFGF-DNCITIRENQILAPKGHKGAITALAFSQMYLISASEDCTVCIRDISSQRIIQKL 372
           LE G  +N +   E+Q    KGHKGA+TAL FSQ  L+SASEDCT+CI DI++  II++ 
Sbjct: 304 LEIGLVENSLAAAEDQKSVIKGHKGAVTALTFSQAGLVSASEDCTICIWDITNWAIIRRF 363

Query: 373 DHKKGRITNLVAIPRSSLISTSNRKRVSNQSSMSSLDKYPQPANLMKSTIPLFSSIQPLG 432
           DHKKG +TNL  IPRSSL+S SN +RVSN   +SSLDKYPQP N  K  +PL SS   L 
Sbjct: 364 DHKKGAVTNLAVIPRSSLLSVSNHRRVSNAFGVSSLDKYPQPPNSSKEKMPLLSSCHFLK 423

Query: 433 ENLNSIRFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTKEVMDMNNHLQS 492
            N        T+   QQI D + E + AA+QMK+ETSLE RMWA+RM K VM+MN HLQ+
Sbjct: 424 GN-------QTTHSEQQICDTEEEFSPAAMQMKLETSLEHRMWATRMAKHVMEMNTHLQT 454

Query: 493 RLLDMMRIRLFEPAKISSSSKKQKDERDRV 522
           RLLD+M+  L         S   K    R+
Sbjct: 484 RLLDLMQSGLLRSTSTEMDSPPTKKRETRM 454

The following BLAST results are available for this feature:

BLAST of CsGy1G009490 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64400.1	1.4e-259	90.44	hypothetical protein Csa_1G050390 [Cucumis sativus]	[more]
XP_016899511.1	6.2e-244	83.33	PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like isoform X2 [Cucumis melo]	[more]
XP_016899510.1	9.8e-242	84.22	PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like isoform X1 [Cucumis melo]	[more]
XP_022137407.1	1.4e-208	73.43	protein ROOT INITIATION DEFECTIVE 3-like isoform X1 [Momordica charantia]	[more]
XP_022954958.1	4.5e-202	72.14	protein ROOT INITIATION DEFECTIVE 3-like [Cucurbita moschata]	[more]

BLAST of CsGy1G009490 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G49180.1	9.1e-48	31.68	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G33340.1	1.7e-06	22.43	MOS4-associated complex 3B	[more]
AT2G45540.2	6.6e-06	35.94	WD-40 repeat family protein / beige-related	[more]
AT4G21130.1	1.9e-05	33.85	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G04510.1	2.5e-05	22.38	MOS4-associated complex 3A	[more]

BLAST of CsGy1G009490 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M3B4\|RID3_ARATH	1.6e-46	31.68	Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1...	[more]
sp\|Q3SZD4\|WDR18_BOVIN	6.9e-21	25.92	WD repeat-containing protein 18 OS=Bos taurus OX=9913 GN=WDR18 PE=2 SV=1	[more]
sp\|Q9BV38\|WDR18_HUMAN	1.0e-19	25.85	WD repeat-containing protein 18 OS=Homo sapiens OX=9606 GN=WDR18 PE=1 SV=2	[more]
sp\|Q68EI0\|WDR18_DANRE	1.3e-19	28.24	WD repeat-containing protein 18 OS=Danio rerio OX=7955 GN=wdr18 PE=2 SV=1	[more]
sp\|Q499N3\|WDR18_RAT	1.1e-18	24.66	WD repeat-containing protein 18 OS=Rattus norvegicus OX=10116 GN=Wdr18 PE=2 SV=1	[more]

BLAST of CsGy1G009490 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LR59\|A0A0A0LR59_CUCSA	9.0e-260	90.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050390 PE=4 SV=1	[more]
tr\|A0A1S4DU43\|A0A1S4DU43_CUCME	4.1e-244	83.33	protein ROOT INITIATION DEFECTIVE 3-like isoform X2 OS=Cucumis melo OX=3656 GN=L...	[more]
tr\|A0A1S4DUX3\|A0A1S4DUX3_CUCME	6.5e-242	84.22	protein ROOT INITIATION DEFECTIVE 3-like isoform X1 OS=Cucumis melo OX=3656 GN=L...	[more]
tr\|A0A1S4DU54\|A0A1S4DU54_CUCME	1.1e-177	67.49	protein ROOT INITIATION DEFECTIVE 3-like isoform X3 OS=Cucumis melo OX=3656 GN=L...	[more]
tr\|A0A251P8U7\|A0A251P8U7_PRUPE	7.2e-132	50.78	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G153000 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036322	WD40_repeat_dom_sf
IPR017986	WD40_repeat_dom
IPR019775	WD40_repeat_CS
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR001680	WD40_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G009490.1	CsGy1G009490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 230..271 e-value: 0.37 score: 19.8 coord: 163..202 e-value: 3.4E-8 score: 43.2 coord: 274..312 e-value: 13.0 score: 9.9 coord: 125..160 e-value: 95.0 score: 4.5 coord: 322..361 e-value: 8.4E-4 score: 28.6
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 330..359 e-value: 0.13 score: 13.1 coord: 165..202 e-value: 7.3E-6 score: 26.5
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 170..203 score: 12.28
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 237..280 score: 8.938
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 331..370 score: 8.503
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	G3DSA:2.130.10.10		coord: 7..208 e-value: 3.3E-17 score: 64.9
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	G3DSA:2.130.10.10		coord: 228..461 e-value: 1.0E-21 score: 79.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 509..533
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 506..533
None	No IPR available	PANTHER	PTHR18763:SF2	SUBFAMILY NOT NAMED	coord: 11..513
None	No IPR available	PANTHER	PTHR18763	WD-REPEAT PROTEIN 18	coord: 11..513
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 258..272
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 128..370 score: 15.795
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	SSF50978	WD40 repeat-like	coord: 138..442

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G009490	Cla002610	Watermelon (97103) v1	cgybwmB010
CsGy1G009490	Csa1G050390	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G009490	MELO3C002353	Melon (DHL92) v3.5.1	cgybmeB022
CsGy1G009490	CSPI01G09440	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G009490	CmaCh18G003250	Cucurbita maxima (Rimu)	cgybcmaB093
CsGy1G009490	CmoCh18G002090	Cucurbita moschata (Rifu)	cgybcmoB082
CsGy1G009490	Lsi02G004930	Bottle gourd (USVL1VR-Ls)	cgyblsiB018
CsGy1G009490	Cp4.1LG09g09590	Cucurbita pepo (Zucchini)	cgybcpeB018
CsGy1G009490	CsaV3_1G009550	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G009490	Cla97C03G054800	Watermelon (97103) v2	cgybwmbB032
CsGy1G009490	Bhi08G001218	Wax gourd	cgybwgoB029
CsGy1G009490	Carg06790	Silver-seed gourd	carcgybB0500

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G009490	Cucumber (Chinese Long) v3	cgybcucB010
CsGy1G009490	Watermelon (97103) v2	cgybwmbB070
CsGy1G009490	Cucumber (Gy14) v2	cgybcgybB005
CsGy1G009490	Cucurbita maxima (Rimu)	cgybcmaB025
CsGy1G009490	Cucurbita maxima (Rimu)	cgybcmaB049
CsGy1G009490	Cucurbita maxima (Rimu)	cgybcmaB063
CsGy1G009490	Cucurbita moschata (Rifu)	cgybcmoB026
CsGy1G009490	Cucurbita moschata (Rifu)	cgybcmoB046
CsGy1G009490	Cucurbita moschata (Rifu)	cgybcmoB058
CsGy1G009490	Cucurbita pepo (Zucchini)	cgybcpeB049
CsGy1G009490	Cucurbita pepo (Zucchini)	cgybcpeB080
CsGy1G009490	Cucurbita pepo (Zucchini)	cgybcpeB123
CsGy1G009490	Cucumber (Chinese Long) v2	cgybcuB014
CsGy1G009490	Bottle gourd (USVL1VR-Ls)	cgyblsiB064
CsGy1G009490	Melon (DHL92) v3.5.1	cgybmeB046
CsGy1G009490	Melon (DHL92) v3.6.1	cgybmedB020
CsGy1G009490	Melon (DHL92) v3.6.1	cgybmedB041
CsGy1G009490	Watermelon (Charleston Gray)	cgybwcgB033
CsGy1G009490	Watermelon (Charleston Gray)	cgybwcgB069
CsGy1G009490	Watermelon (97103) v1	cgybwmB087
CsGy1G009490	Wild cucumber (PI 183967)	cgybcpiB013
CsGy1G009490	Silver-seed gourd	carcgybB0373
CsGy1G009490	Silver-seed gourd	carcgybB0989