BLAST of Carg06790 vs. NCBI nr
Match:
XP_022954958.1 (protein ROOT INITIATION DEFECTIVE 3-like [Cucurbita moschata])
HSP 1 Score: 916.0 bits (2366), Expect = 5.1e-263
Identity = 460/461 (99.78%), Postives = 460/461 (99.78%), Query Frame = 0
Query: 1 MSNVGETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTR 60
MSNVGETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTR
Sbjct: 1 MSNVGETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTR 60
Query: 61 KEGSVGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWEVGSGK 120
KEGSVGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDG YLAGGAHSGNIHLWEVGSGK
Sbjct: 61 KEGSVGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGAYLAGGAHSGNIHLWEVGSGK 120
Query: 121 LLKLWSGHHKPIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGSAQPILYCLMEH 180
LLKLWSGHHKPIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGSAQPILYCLMEH
Sbjct: 121 LLKLWSGHHKPIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGSAQPILYCLMEH 180
Query: 181 KSSLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHVEGITEIVLHPTEQFLF 240
KSSLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHVEGITEIVLHPTEQFLF
Sbjct: 181 KSSLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHVEGITEIVLHPTEQFLF 240
Query: 241 SGTVDGKIFASRLEFGLDNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIW 300
SGTVDGKIFASRLEFGLDNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIW
Sbjct: 241 SGTVDGKIFASRLEFGLDNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIW 300
Query: 301 DIDSQRIIQKLDHKKGRITNLVAVPRSSLLISTSNRKRVLKQFDKYPQPANLSTSTIPLF 360
DIDSQRIIQKLDHKKGRITNLVAVPRSSLLISTSNRKRVLKQFDKYPQPANLSTSTIPLF
Sbjct: 301 DIDSQRIIQKLDHKKGRITNLVAVPRSSLLISTSNRKRVLKQFDKYPQPANLSTSTIPLF 360
Query: 361 PSSRPLGENPNLVGFTSAGSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMTKQVME 420
PSSRPLGENPNLVGFTSAGSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMTKQVME
Sbjct: 361 PSSRPLGENPNLVGFTSAGSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMTKQVME 420
Query: 421 MNNHLQSKLLDMMQTRLFPKKRKDQRDRVARTREKHPLSFH 462
MNNHLQSKLLDMMQTRLFPKKRKDQRDRVARTREKHPLSFH
Sbjct: 421 MNNHLQSKLLDMMQTRLFPKKRKDQRDRVARTREKHPLSFH 461
BLAST of Carg06790 vs. NCBI nr
Match:
XP_023542664.1 (protein ROOT INITIATION DEFECTIVE 3-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 902.1 bits (2330), Expect = 7.7e-259
Identity = 452/461 (98.05%), Postives = 458/461 (99.35%), Query Frame = 0
Query: 1 MSNVGETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTR 60
MSNVGETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTR
Sbjct: 1 MSNVGETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTR 60
Query: 61 KEGSVGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWEVGSGK 120
KEGSVGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWEVGSGK
Sbjct: 61 KEGSVGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWEVGSGK 120
Query: 121 LLKLWSGHHKPIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGSAQPILYCLMEH 180
LLKLWSGHHKPIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVG+AQP+LYCL+EH
Sbjct: 121 LLKLWSGHHKPIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGTAQPMLYCLIEH 180
Query: 181 KSSLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHVEGITEIVLHPTEQFLF 240
KS LTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGH+EGITEIVLHPTEQFLF
Sbjct: 181 KSPLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHLEGITEIVLHPTEQFLF 240
Query: 241 SGTVDGKIFASRLEFGLDNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIW 300
SGTVDGKIFASRLEFGLDNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIW
Sbjct: 241 SGTVDGKIFASRLEFGLDNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIW 300
Query: 301 DIDSQRIIQKLDHKKGRITNLVAVPRSSLLISTSNRKRVLKQFDKYPQPANLSTSTIPLF 360
DIDSQRIIQKLDHKKGRITNLVA PRSSLLISTSNRKRVLKQFDKYPQPANLSTSTIPLF
Sbjct: 301 DIDSQRIIQKLDHKKGRITNLVAFPRSSLLISTSNRKRVLKQFDKYPQPANLSTSTIPLF 360
Query: 361 PSSRPLGENPNLVGFTSAGSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMTKQVME 420
PSSRPLGENPNLVGFTSA SLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMTKQVME
Sbjct: 361 PSSRPLGENPNLVGFTSASSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMTKQVME 420
Query: 421 MNNHLQSKLLDMMQTRLFPKKRKDQRDRVARTREKHPLSFH 462
MNNHLQS+LLDMMQTRLFPKKRKDQRDRVARTREKHPLSF+
Sbjct: 421 MNNHLQSQLLDMMQTRLFPKKRKDQRDRVARTREKHPLSFN 461
BLAST of Carg06790 vs. NCBI nr
Match:
XP_022994395.1 (protein ROOT INITIATION DEFECTIVE 3-like [Cucurbita maxima])
HSP 1 Score: 896.7 bits (2316), Expect = 3.2e-257
Identity = 452/461 (98.05%), Postives = 456/461 (98.92%), Query Frame = 0
Query: 1 MSNVGETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTR 60
MSNVGETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTR
Sbjct: 1 MSNVGETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTR 60
Query: 61 KEGSVGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWEVGSGK 120
KEGSVGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWEVGSGK
Sbjct: 61 KEGSVGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWEVGSGK 120
Query: 121 LLKLWSGHHKPIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGSAQPILYCLMEH 180
LLKLWSGHHKPIKFILFSWDDSFLITGSADGMI VWSMISLLDVELVGSAQPILY LMEH
Sbjct: 121 LLKLWSGHHKPIKFILFSWDDSFLITGSADGMIFVWSMISLLDVELVGSAQPILYSLMEH 180
Query: 181 KSSLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHVEGITEIVLHPTEQFLF 240
KSSLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQ HVEGITEIVLHPTEQFLF
Sbjct: 181 KSSLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQAHVEGITEIVLHPTEQFLF 240
Query: 241 SGTVDGKIFASRLEFGLDNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIW 300
SGTVDGKIFASRLEFGLDNCITIKESQLFASTGHKGAITALAFS MDLVSASEDCTVCIW
Sbjct: 241 SGTVDGKIFASRLEFGLDNCITIKESQLFASTGHKGAITALAFSLMDLVSASEDCTVCIW 300
Query: 301 DIDSQRIIQKLDHKKGRITNLVAVPRSSLLISTSNRKRVLKQFDKYPQPANLSTSTIPLF 360
DI+SQ IIQKL+HKKGRITNLVAVPRSSLLISTSNRKRVLKQFDKYPQPANLSTSTIPLF
Sbjct: 301 DINSQMIIQKLEHKKGRITNLVAVPRSSLLISTSNRKRVLKQFDKYPQPANLSTSTIPLF 360
Query: 361 PSSRPLGENPNLVGFTSAGSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMTKQVME 420
PSSRPLGENPNL+GFTSAGSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMTKQVME
Sbjct: 361 PSSRPLGENPNLIGFTSAGSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMTKQVME 420
Query: 421 MNNHLQSKLLDMMQTRLFPKKRKDQRDRVARTREKHPLSFH 462
MNNHLQS+LLDMMQTRLFPKKRKDQRDRVARTREKHPLSFH
Sbjct: 421 MNNHLQSQLLDMMQTRLFPKKRKDQRDRVARTREKHPLSFH 461
BLAST of Carg06790 vs. NCBI nr
Match:
KGN64400.1 (hypothetical protein Csa_1G050390 [Cucumis sativus])
HSP 1 Score: 745.0 bits (1922), Expect = 1.6e-211
Identity = 379/474 (79.96%), Postives = 413/474 (87.13%), Query Frame = 0
Query: 1 MSNVGETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTR 60
M N GE+MALAVCSD+NMG GITIWD KTG+TLLHIPTCASP YG I LRNEF VASQTR
Sbjct: 1 MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVASQTR 60
Query: 61 KEGSVGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWEVGSGK 120
KEGSVGGGS+F+WSL+KP P+ SY LE IGPLASTKDGVYLAGG HSGNIHLWEVGSG+
Sbjct: 61 KEGSVGGGSIFIWSLNKPLPPVTSYTLETIGPLASTKDGVYLAGGTHSGNIHLWEVGSGE 120
Query: 121 LLKLWSGHHKPIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGSAQPILYCLMEH 180
LLKLWSGHHKP+K +LFSWDDSFLITGS+DGMICVWSMISLLDVELVG++QPI+YCLMEH
Sbjct: 121 LLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISLLDVELVGNSQPIVYCLMEH 180
Query: 181 KSSLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHVEGITEIVLHPTEQFLF 240
SSLTGL+TMSG SMS+IISSSLDGSLKFWDLMSGMIRGTQ H+EGIT IVLHPTEQ LF
Sbjct: 181 NSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLF 240
Query: 241 SGTVDGKIFASRLEFGLDNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIW 300
SGTVDG+IFASRLEFG DNCITI+E+Q+ A GHKGAITALAFSQM L+SASEDCTVCI
Sbjct: 241 SGTVDGQIFASRLEFGFDNCITIRENQILAPKGHKGAITALAFSQMYLISASEDCTVCIR 300
Query: 301 DIDSQRIIQKLDHKKGRITNLVAVPRSSLLISTSNRKRVLKQ-----FDKYPQPANLSTS 360
DI SQRIIQKLDHKKGRITNLVA+PRSS LISTSNRKRV Q DKYPQPANL S
Sbjct: 301 DISSQRIIQKLDHKKGRITNLVAIPRSS-LISTSNRKRVSNQSSMSSLDKYPQPANLMKS 360
Query: 361 TIPLFPSSRPLGENPNLVGFTSAGSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMT 420
TIPLF S +PLGEN N + FTS SLNQQI DMKTEGTSAAIQMKV+T L+ RMWASRMT
Sbjct: 361 TIPLFSSIQPLGENLNSIRFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMT 420
Query: 421 KQVMEMNNHLQSKLLDMMQTRLF--------PKKRKDQRDRVARTREKHPLSFH 462
K+VM+MNNHLQS+LLDMM+ RLF KK+KD+RDRVA+ REK LSFH
Sbjct: 421 KEVMDMNNHLQSRLLDMMRIRLFEPAKISSSSKKQKDERDRVAKKREKRTLSFH 473
BLAST of Carg06790 vs. NCBI nr
Match:
XP_016899510.1 (PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like isoform X1 [Cucumis melo])
HSP 1 Score: 741.9 bits (1914), Expect = 1.3e-210
Identity = 374/474 (78.90%), Postives = 412/474 (86.92%), Query Frame = 0
Query: 1 MSNVGETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTR 60
M N GE+MALAVCSD+NMG GITIWD KTG+TLLHIP+CASP YG I LRNEF VASQTR
Sbjct: 91 MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPSCASPPYGFICLRNEFFVASQTR 150
Query: 61 KEGSVGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWEVGSGK 120
KEGSVGGG++F+WSL+KPQ P+ SY LE IGPLASTKD VYLAGG HSGNIHLWEVGSGK
Sbjct: 151 KEGSVGGGTIFIWSLNKPQPPVMSYTLETIGPLASTKDSVYLAGGTHSGNIHLWEVGSGK 210
Query: 121 LLKLWSGHHKPIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGSAQPILYCLMEH 180
LLKLWSGHHKP+K +LFSWDDSFLITGS+DGMICVWSMISLLDVELV ++QP++YCLM+H
Sbjct: 211 LLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISLLDVELVENSQPLVYCLMQH 270
Query: 181 KSSLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHVEGITEIVLHPTEQFLF 240
KSSLTGL+TMSG SMS+IISSSLDGSLKFWDLMSGMI+GTQ H+EGIT IVLHPTEQ LF
Sbjct: 271 KSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIKGTQAHIEGITAIVLHPTEQVLF 330
Query: 241 SGTVDGKIFASRLEFGLDNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIW 300
SGTVDG+I ASRLE G DNCIT+KE+Q+ A GHKGAITALAFSQ DL+SASEDCTVCIW
Sbjct: 331 SGTVDGQISASRLELGFDNCITVKENQILAPKGHKGAITALAFSQTDLISASEDCTVCIW 390
Query: 301 DIDSQRIIQKLDHKKGRITNLVAVPRSSLLISTSNRKRVLKQF-----DKYPQPANLSTS 360
DI QRIIQKLDHKKGRITNLVA+PRSS LISTSNRKRVL QF DKYPQPANL S
Sbjct: 391 DISRQRIIQKLDHKKGRITNLVAIPRSS-LISTSNRKRVLNQFSMSSLDKYPQPANLMKS 450
Query: 361 TIPLFPSSRPLGENPNLVGFTSAGSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMT 420
TIPLF S +PL EN N +GFTS SLNQQI DMKTEGTSAAIQMKV+T L+ RMWASRMT
Sbjct: 451 TIPLFSSLQPLQENLNSIGFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMT 510
Query: 421 KQVMEMNNHLQSKLLDMMQTRLF--------PKKRKDQRDRVARTREKHPLSFH 462
KQVM+MNNHLQS++LDMM+ RLF KK+KD+RDRVA+ EK P SFH
Sbjct: 511 KQVMDMNNHLQSRVLDMMRIRLFEPTKINSSSKKQKDERDRVAKKMEKLPSSFH 563
BLAST of Carg06790 vs. TAIR10
Match:
AT3G49180.1 (Transducin/WD40 repeat-like superfamily protein)
HSP 1 Score: 217.2 bits (552), Expect = 2.1e-56
Identity = 150/445 (33.71%), Postives = 234/445 (52.58%), Query Frame = 0
Query: 8 MALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTRKEGSVGG 67
M + V + ++ GI WD KTG L CASP++GL ++ +FL +SQ +
Sbjct: 1 MEITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNT--S 60
Query: 68 GSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWEVGSGKLLKLWSG 127
GS+F WS +KPQ+ ++SYP+EPI LA+ +G YL GG SG+I+LWEV +GKLLK W G
Sbjct: 61 GSIFYWSWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHG 120
Query: 128 HHKPIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGSAQPILY--CLMEHKSSLT 187
H++ + ++FS DDS L++GS DG I VWS+I L D + LY EH S+T
Sbjct: 121 HYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFD-DFQRQQGNTLYEHNFNEHTMSVT 180
Query: 188 GLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHVEGITEIVLHPTEQFLFSGTVD 247
++ G ++IISSS D + K W L G + I + L P ++G D
Sbjct: 181 DIVIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARD 240
Query: 248 GKIFASRLEFGLDNCITIKESQLFASTGHKG-AITALAFSQMD--LVSASEDCTVCIWDI 307
KI+ G N + +Q+ S KG AIT LA+ L+S SED VC+WD
Sbjct: 241 SKIY-----IGAINATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDP 300
Query: 308 DSQRIIQKLDH----KKGRITNLVAVPRSSLLISTSNRKRVL---------KQFDKYPQP 367
S R ++ L H +KG + N+ V ++ +++ SN+ +V +KY +P
Sbjct: 301 KSLRHVRTLIHAKGSRKGPVNNIQIVRKT--IVANSNKTQVSWKSRGALIPPPLEKYERP 360
Query: 368 ANLSTSTIPLFPSSRPLGENPNLVGFTSAGSLNQQIFDMKTEGTSAAIQMKVDTRLQSRM 427
+ I + P + P F SA +++Q+ +++ +G SAA +M+++ RL+
Sbjct: 361 VEDTMDGI-VTVDPPPFSDVPVYSSFLSADLIDEQVKELQQQG-SAATEMEME-RLKLEY 420
Query: 428 WASRMTKQVMEMNNHLQSKLLDMMQ 435
K+ ++MN Q +++Q
Sbjct: 421 ------KRSLQMNEQWQKNYENLLQ 426
BLAST of Carg06790 vs. TAIR10
Match:
AT2G45540.2 (WD-40 repeat family protein / beige-related)
HSP 1 Score: 46.2 bits (108), Expect = 6.3e-05
Identity = 22/64 (34.38%), Postives = 33/64 (51.56%), Query Frame = 0
Query: 93 LASTKDGVYLAGGAHSGNIHLWEVGSGKLLKLWSGHHKPIKFILFSWDDSFLITGSADGM 152
+A T DG + GG +I L K L+ GH P+ + S D++FL+TGS D
Sbjct: 2687 IAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDST 2746
Query: 153 ICVW 157
+ +W
Sbjct: 2747 VLLW 2750
BLAST of Carg06790 vs. TAIR10
Match:
AT1G49040.1 (stomatal cytokinesis defective / SCD1 protein (SCD1))
HSP 1 Score: 44.3 bits (103), Expect = 2.4e-04
Identity = 39/132 (29.55%), Postives = 57/132 (43.18%), Query Frame = 0
Query: 102 LAGGAHSGNIHLWEVGSGKLLKLWSGHHKPIKFILFSWDDSFLITGSADGMICVWSMISL 161
LA ++W++ SGK + GH K I+ I D LITGS D VWS+
Sbjct: 995 LAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDT--LITGSDDWTARVWSVSR- 1054
Query: 162 LDVELVGSAQPILYCLMEHKSSLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQ 221
GS +L C H + + S + II+ S DG L+FW+ +
Sbjct: 1055 ------GSCDAVLAC---HAGPVQS-VEYSPFDKG-IITGSADGLLRFWE-------NDE 1105
Query: 222 GHVEGITEIVLH 234
G ++ + I LH
Sbjct: 1115 GGIKCVKNITLH 1105
BLAST of Carg06790 vs. TAIR10
Match:
AT2G25420.1 (transducin family protein / WD-40 repeat family protein)
HSP 1 Score: 42.4 bits (98), Expect = 9.1e-04
Identity = 37/174 (21.26%), Postives = 72/174 (41.38%), Query Frame = 0
Query: 27 PKTGETLLH-IPTCASPSYGLISLRNEFLVASQTRKEGSVGGGSMFVWSLSKPQSPLRSY 86
P++G+T+ + + T S +++ +L S GG + V+ L +
Sbjct: 439 PQSGKTMENEMATSVQKSTSCFAVKGSYLF--------STSGGKIAVFDLKNFEKVASFG 498
Query: 87 PLEPIGPLASTKDGVYLAGGAHSGNIHLWEVGSGKLLKLWSGHHKPIKFILFSWDDSFLI 146
P+ G LA G G+I + + S K+ + GH + I + FS + L+
Sbjct: 499 SPTPMATYFIFIPGDLLAVGLDDGSIFIHCLSSRKVKEKLEGHDQKITCLAFSRCFNVLV 558
Query: 147 TGSADGMICVWSMISLLDVELVGSAQPILYCLMEHKSSLTGLITMSGYSMSMII 200
+ +DG +C+WS S + + S + +SL I Y + +++
Sbjct: 559 SSDSDGKLCLWSTKSWVKLTSKNSTRKFCNRSNLESTSLVTHIQFDPYQIELLV 604
BLAST of Carg06790 vs. Swiss-Prot
Match:
sp|Q9M3B4|RID3_ARATH (Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1 SV=1)
HSP 1 Score: 217.2 bits (552), Expect = 3.7e-55
Identity = 150/445 (33.71%), Postives = 234/445 (52.58%), Query Frame = 0
Query: 8 MALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTRKEGSVGG 67
M + V + ++ GI WD KTG L CASP++GL ++ +FL +SQ +
Sbjct: 1 MEITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNT--S 60
Query: 68 GSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWEVGSGKLLKLWSG 127
GS+F WS +KPQ+ ++SYP+EPI LA+ +G YL GG SG+I+LWEV +GKLLK W G
Sbjct: 61 GSIFYWSWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHG 120
Query: 128 HHKPIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGSAQPILY--CLMEHKSSLT 187
H++ + ++FS DDS L++GS DG I VWS+I L D + LY EH S+T
Sbjct: 121 HYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFD-DFQRQQGNTLYEHNFNEHTMSVT 180
Query: 188 GLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHVEGITEIVLHPTEQFLFSGTVD 247
++ G ++IISSS D + K W L G + I + L P ++G D
Sbjct: 181 DIVIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARD 240
Query: 248 GKIFASRLEFGLDNCITIKESQLFASTGHKG-AITALAFSQMD--LVSASEDCTVCIWDI 307
KI+ G N + +Q+ S KG AIT LA+ L+S SED VC+WD
Sbjct: 241 SKIY-----IGAINATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDP 300
Query: 308 DSQRIIQKLDH----KKGRITNLVAVPRSSLLISTSNRKRVL---------KQFDKYPQP 367
S R ++ L H +KG + N+ V ++ +++ SN+ +V +KY +P
Sbjct: 301 KSLRHVRTLIHAKGSRKGPVNNIQIVRKT--IVANSNKTQVSWKSRGALIPPPLEKYERP 360
Query: 368 ANLSTSTIPLFPSSRPLGENPNLVGFTSAGSLNQQIFDMKTEGTSAAIQMKVDTRLQSRM 427
+ I + P + P F SA +++Q+ +++ +G SAA +M+++ RL+
Sbjct: 361 VEDTMDGI-VTVDPPPFSDVPVYSSFLSADLIDEQVKELQQQG-SAATEMEME-RLKLEY 420
Query: 428 WASRMTKQVMEMNNHLQSKLLDMMQ 435
K+ ++MN Q +++Q
Sbjct: 421 ------KRSLQMNEQWQKNYENLLQ 426
BLAST of Carg06790 vs. Swiss-Prot
Match:
sp|Q68EI0|WDR18_DANRE (WD repeat-containing protein 18 OS=Danio rerio OX=7955 GN=wdr18 PE=2 SV=1)
HSP 1 Score: 123.2 bits (308), Expect = 7.3e-27
Identity = 94/344 (27.33%), Postives = 170/344 (49.42%), Query Frame = 0
Query: 24 IWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTRKEGSVGGGSMFVWSLSKPQSPLR 83
++DP TG L + S L L E+++ +Q +G + VW + + + L+
Sbjct: 22 VYDPHTGSEFLSYRGGNTSSRSLTILNGEYILGAQ------LGKNYINVWEIQR-KDQLQ 81
Query: 84 SYPLEP--IGPLASTKDGVYLAGGAHSGNIHLWEVGSGKLLKLWSGHHKPIKFILFSWDD 143
+ P + L ++ DG+Y+ G I+LWEV +G LL + S H + + I F+ D
Sbjct: 82 QKIVCPGIVTCLCASPDGLYVLAGIAEA-IYLWEVSTGNLLAILSRHFQDLSCIKFTDDS 141
Query: 144 SFLITGSADGMICVWSMISLLDVELVGSAQPILYCLMEHKSSLTGLITMSGYSMSMIISS 203
S ++G D + +W++ S++ ++ + +P + L H +T + + + ++
Sbjct: 142 SHFVSGGKDNLAFIWNLSSVVQLDSSRTPEP-RHILSRHSLPITDIHCGLMGPQARVATA 201
Query: 204 SLDGSLKFWDLMSGMIRGTQGHVEGITEIVLHPTEQFLFSGTVDGKIF-ASRLEFGLDNC 263
SLD ++K W++ SG + + GI + P E FLF G DG IF S L
Sbjct: 202 SLDQTVKVWEISSGEMLLSVLFDVGIMSVTFDPCEYFLFCGGSDGNIFQVSLCSTSLSRD 261
Query: 264 ITIKE----SQLFASTGHKGAITALAFSQMD---LVSASEDCTVCIWDIDSQRIIQKLDH 323
T + +Q+F GH+ +T L+ S MD L+S S D TV +WD+ S++ I ++H
Sbjct: 262 KTFQSDSEGNQVF--KGHRNLVTCLSVS-MDGTVLLSGSNDETVRMWDVQSKQCIWTINH 321
Query: 324 KKGRITNLVAVPR-SSLLISTSNRKRVLKQFDKYPQPANLSTST 357
+G +TN +P +++ +S S+ L +F ++ P+ T
Sbjct: 322 -RGPVTNAAIIPAPANMFLSDSHPAVPLPRFSRHLNPSEQGDGT 352
BLAST of Carg06790 vs. Swiss-Prot
Match:
sp|Q3SZD4|WDR18_BOVIN (WD repeat-containing protein 18 OS=Bos taurus OX=9913 GN=WDR18 PE=2 SV=1)
HSP 1 Score: 119.0 bits (297), Expect = 1.4e-25
Identity = 95/347 (27.38%), Postives = 164/347 (47.26%), Query Frame = 0
Query: 8 MALAVCSDKNMGS-GITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTRKEGSVG 67
M +AVC+D +W+ +G LL + GL L E+L+A+Q +G
Sbjct: 5 MEVAVCTDSAAQLWSCVVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQ------LG 64
Query: 68 GGSMFVWSLS-KPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWEVGSGKLLKLW 127
+ W L K Q + P+ L ++ +G+Y+ G S NI+LWEV +G LL +
Sbjct: 65 KNYICAWELQRKDQLQQKIMCPGPVTCLTTSPNGLYVLAGI-SENIYLWEVSTGNLLVIL 124
Query: 128 SGHHKPIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGSAQPILYCLMEHKSSLT 187
S H++ + + F+ D S I+G D ++ WS+ S+L + + P + H +T
Sbjct: 125 SRHYQDVSCLQFTGDSSHFISGGKDCLVLAWSLCSVLQADPSRTPAP-RHVWSRHTLPIT 184
Query: 188 GLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHVEGITEIVLHPTEQFLFSGTVD 247
L G ++ + ++SLD ++K W++ SG + + GI + + E ++F G D
Sbjct: 185 DLHCGFGGPLARVATASLDQTVKLWEVSSGELLLSVLFDVGILAVTMDLAEHYMFCGGSD 244
Query: 248 GKIFASRL---EFGLDNCITIKESQLFASTGHKGAITALAFSQ--MDLVSASEDCTVCIW 307
G IF L + ++ GH+ +T L+ S L+S S D TV +W
Sbjct: 245 GSIFQVDLCTWPGQREKSFQPEQEHGKVFRGHRNQVTCLSVSTDGSVLLSGSHDETVRLW 304
Query: 308 DIDSQRIIQKLDHKKGRITN-LVAVPRSSLLISTSNRKRVLKQFDKY 347
D+ SQ+ ++ + KG +TN + + S+L S L F+K+
Sbjct: 305 DVQSQQCLRTVT-LKGPVTNACIMLAPVSMLSSDFRPGLPLPHFNKH 342
BLAST of Carg06790 vs. Swiss-Prot
Match:
sp|Q9BV38|WDR18_HUMAN (WD repeat-containing protein 18 OS=Homo sapiens OX=9606 GN=WDR18 PE=1 SV=2)
HSP 1 Score: 114.4 bits (285), Expect = 3.4e-24
Identity = 97/348 (27.87%), Postives = 165/348 (47.41%), Query Frame = 0
Query: 8 MALAVCSDK--NMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTRKEGSV 67
M +AVC+D M S I +W+ +G LL + GL L E+L+A+Q +
Sbjct: 5 MEVAVCTDSAAPMWSCI-VWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQ------L 64
Query: 68 GGGSMFVWSLS-KPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWEVGSGKLLKL 127
G + W L K Q + P+ L ++ +G+Y+ G + +IHLWEV +G LL +
Sbjct: 65 GKNYISAWELQRKDQLQQKIMCPGPVTCLTASPNGLYVLAGV-AESIHLWEVSTGNLLVI 124
Query: 128 WSGHHKPIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGSAQPILYCLMEHKSSL 187
S H++ + + F+ D S I+G D ++ VWS+ S+L + P + H +
Sbjct: 125 LSRHYQDVSCLQFTGDSSHFISGGKDCLVLVWSLCSVLQADPSRIPAP-RHVWSHHALPI 184
Query: 188 TGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHVEGITEIVLHPTEQFLFSGTV 247
T L G ++ + +SSLD ++K W++ SG + + I + + E +F G
Sbjct: 185 TDLHCGFGGPLARVATSSLDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLAEHHMFCGGS 244
Query: 248 DGKIFASRL---EFGLDNCITIKESQLFASTGHKGAITALAFSQ--MDLVSASEDCTVCI 307
+G IF L + ++ GH+ +T L+ S L+S S D TV +
Sbjct: 245 EGSIFQVDLFTWPGQRERSFHPEQDAGKVFKGHRNQVTCLSVSTDGSVLLSGSHDETVRL 304
Query: 308 WDIDSQRIIQKLDHKKGRITN-LVAVPRSSLLISTSNRKRVLKQFDKY 347
WD+ S++ I+ + KG +TN + + S+L S L F+K+
Sbjct: 305 WDVQSKQCIRTV-ALKGPVTNAAILLAPVSMLSSDFRPSLPLPHFNKH 342
BLAST of Carg06790 vs. Swiss-Prot
Match:
sp|Q499N3|WDR18_RAT (WD repeat-containing protein 18 OS=Rattus norvegicus OX=10116 GN=Wdr18 PE=2 SV=1)
HSP 1 Score: 108.2 bits (269), Expect = 2.4e-22
Identity = 89/347 (25.65%), Postives = 160/347 (46.11%), Query Frame = 0
Query: 8 MALAVCSDKNMGS-GITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTRKEGSVG 67
M + VC+D +W+ +G LL + GL L E+L+A+Q G
Sbjct: 5 MEVVVCTDSAAPLWSCMVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQQ------G 64
Query: 68 GGSMFVWSLS-KPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWEVGSGKLLKLW 127
+ W L K Q + P+ L + +G+Y+ G + +I+LWEV +G LL +
Sbjct: 65 KNYICAWELQRKDQLQQKIMCPGPVTCLTTAPNGLYVLAGI-AESIYLWEVSTGNLLVIL 124
Query: 128 SGHHKPIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGSAQPILYCLMEHKSSLT 187
S H++ + + F+ D S ++ D ++ WS+ S+L + P + +H +T
Sbjct: 125 SRHYQDVSCLKFTGDGSHFVSAGKDCLVLAWSLCSVLQADPSRILAP-RHVWSQHTLPIT 184
Query: 188 GLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHVEGITEIVLHPTEQFLFSGTVD 247
L G M+ + ++SLD ++K W + SG + + GIT + + E ++F G D
Sbjct: 185 DLHCGFGGPMARVATASLDQTMKLWAISSGDLLLSVLFDMGITSVTMDLAEHYIFCGGSD 244
Query: 248 GKIFASRL---EFGLDNCITIKESQLFASTGHKGAITALAFSQ--MDLVSASEDCTVCIW 307
G IF L + +++ GH+ +T L+ S L+S S D +V +W
Sbjct: 245 GSIFQVDLCSRPGPREQSFQPEQNTGKVFKGHRNQVTCLSVSTDGSILLSGSHDESVRLW 304
Query: 308 DIDSQRIIQKLDHKKGRITN-LVAVPRSSLLISTSNRKRVLKQFDKY 347
D+ S++ ++ + KG +TN + + S+L L F+K+
Sbjct: 305 DVKSKQCVRTVP-LKGPVTNAAITLAPPSMLNPEFRPSLPLPHFNKH 342
BLAST of Carg06790 vs. TrEMBL
Match:
tr|A0A0A0LR59|A0A0A0LR59_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050390 PE=4 SV=1)
HSP 1 Score: 745.0 bits (1922), Expect = 1.0e-211
Identity = 379/474 (79.96%), Postives = 413/474 (87.13%), Query Frame = 0
Query: 1 MSNVGETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTR 60
M N GE+MALAVCSD+NMG GITIWD KTG+TLLHIPTCASP YG I LRNEF VASQTR
Sbjct: 1 MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVASQTR 60
Query: 61 KEGSVGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWEVGSGK 120
KEGSVGGGS+F+WSL+KP P+ SY LE IGPLASTKDGVYLAGG HSGNIHLWEVGSG+
Sbjct: 61 KEGSVGGGSIFIWSLNKPLPPVTSYTLETIGPLASTKDGVYLAGGTHSGNIHLWEVGSGE 120
Query: 121 LLKLWSGHHKPIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGSAQPILYCLMEH 180
LLKLWSGHHKP+K +LFSWDDSFLITGS+DGMICVWSMISLLDVELVG++QPI+YCLMEH
Sbjct: 121 LLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISLLDVELVGNSQPIVYCLMEH 180
Query: 181 KSSLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHVEGITEIVLHPTEQFLF 240
SSLTGL+TMSG SMS+IISSSLDGSLKFWDLMSGMIRGTQ H+EGIT IVLHPTEQ LF
Sbjct: 181 NSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLF 240
Query: 241 SGTVDGKIFASRLEFGLDNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIW 300
SGTVDG+IFASRLEFG DNCITI+E+Q+ A GHKGAITALAFSQM L+SASEDCTVCI
Sbjct: 241 SGTVDGQIFASRLEFGFDNCITIRENQILAPKGHKGAITALAFSQMYLISASEDCTVCIR 300
Query: 301 DIDSQRIIQKLDHKKGRITNLVAVPRSSLLISTSNRKRVLKQ-----FDKYPQPANLSTS 360
DI SQRIIQKLDHKKGRITNLVA+PRSS LISTSNRKRV Q DKYPQPANL S
Sbjct: 301 DISSQRIIQKLDHKKGRITNLVAIPRSS-LISTSNRKRVSNQSSMSSLDKYPQPANLMKS 360
Query: 361 TIPLFPSSRPLGENPNLVGFTSAGSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMT 420
TIPLF S +PLGEN N + FTS SLNQQI DMKTEGTSAAIQMKV+T L+ RMWASRMT
Sbjct: 361 TIPLFSSIQPLGENLNSIRFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMT 420
Query: 421 KQVMEMNNHLQSKLLDMMQTRLF--------PKKRKDQRDRVARTREKHPLSFH 462
K+VM+MNNHLQS+LLDMM+ RLF KK+KD+RDRVA+ REK LSFH
Sbjct: 421 KEVMDMNNHLQSRLLDMMRIRLFEPAKISSSSKKQKDERDRVAKKREKRTLSFH 473
BLAST of Carg06790 vs. TrEMBL
Match:
tr|A0A1S4DU43|A0A1S4DU43_CUCME (protein ROOT INITIATION DEFECTIVE 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484316 PE=4 SV=1)
HSP 1 Score: 741.9 bits (1914), Expect = 8.8e-211
Identity = 374/474 (78.90%), Postives = 412/474 (86.92%), Query Frame = 0
Query: 1 MSNVGETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTR 60
M N GE+MALAVCSD+NMG GITIWD KTG+TLLHIP+CASP YG I LRNEF VASQTR
Sbjct: 18 MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPSCASPPYGFICLRNEFFVASQTR 77
Query: 61 KEGSVGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWEVGSGK 120
KEGSVGGG++F+WSL+KPQ P+ SY LE IGPLASTKD VYLAGG HSGNIHLWEVGSGK
Sbjct: 78 KEGSVGGGTIFIWSLNKPQPPVMSYTLETIGPLASTKDSVYLAGGTHSGNIHLWEVGSGK 137
Query: 121 LLKLWSGHHKPIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGSAQPILYCLMEH 180
LLKLWSGHHKP+K +LFSWDDSFLITGS+DGMICVWSMISLLDVELV ++QP++YCLM+H
Sbjct: 138 LLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISLLDVELVENSQPLVYCLMQH 197
Query: 181 KSSLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHVEGITEIVLHPTEQFLF 240
KSSLTGL+TMSG SMS+IISSSLDGSLKFWDLMSGMI+GTQ H+EGIT IVLHPTEQ LF
Sbjct: 198 KSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIKGTQAHIEGITAIVLHPTEQVLF 257
Query: 241 SGTVDGKIFASRLEFGLDNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIW 300
SGTVDG+I ASRLE G DNCIT+KE+Q+ A GHKGAITALAFSQ DL+SASEDCTVCIW
Sbjct: 258 SGTVDGQISASRLELGFDNCITVKENQILAPKGHKGAITALAFSQTDLISASEDCTVCIW 317
Query: 301 DIDSQRIIQKLDHKKGRITNLVAVPRSSLLISTSNRKRVLKQF-----DKYPQPANLSTS 360
DI QRIIQKLDHKKGRITNLVA+PRSS LISTSNRKRVL QF DKYPQPANL S
Sbjct: 318 DISRQRIIQKLDHKKGRITNLVAIPRSS-LISTSNRKRVLNQFSMSSLDKYPQPANLMKS 377
Query: 361 TIPLFPSSRPLGENPNLVGFTSAGSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMT 420
TIPLF S +PL EN N +GFTS SLNQQI DMKTEGTSAAIQMKV+T L+ RMWASRMT
Sbjct: 378 TIPLFSSLQPLQENLNSIGFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMT 437
Query: 421 KQVMEMNNHLQSKLLDMMQTRLF--------PKKRKDQRDRVARTREKHPLSFH 462
KQVM+MNNHLQS++LDMM+ RLF KK+KD+RDRVA+ EK P SFH
Sbjct: 438 KQVMDMNNHLQSRVLDMMRIRLFEPTKINSSSKKQKDERDRVAKKMEKLPSSFH 490
BLAST of Carg06790 vs. TrEMBL
Match:
tr|A0A1S4DUX3|A0A1S4DUX3_CUCME (protein ROOT INITIATION DEFECTIVE 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484316 PE=4 SV=1)
HSP 1 Score: 741.9 bits (1914), Expect = 8.8e-211
Identity = 374/474 (78.90%), Postives = 412/474 (86.92%), Query Frame = 0
Query: 1 MSNVGETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTR 60
M N GE+MALAVCSD+NMG GITIWD KTG+TLLHIP+CASP YG I LRNEF VASQTR
Sbjct: 91 MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPSCASPPYGFICLRNEFFVASQTR 150
Query: 61 KEGSVGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWEVGSGK 120
KEGSVGGG++F+WSL+KPQ P+ SY LE IGPLASTKD VYLAGG HSGNIHLWEVGSGK
Sbjct: 151 KEGSVGGGTIFIWSLNKPQPPVMSYTLETIGPLASTKDSVYLAGGTHSGNIHLWEVGSGK 210
Query: 121 LLKLWSGHHKPIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGSAQPILYCLMEH 180
LLKLWSGHHKP+K +LFSWDDSFLITGS+DGMICVWSMISLLDVELV ++QP++YCLM+H
Sbjct: 211 LLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISLLDVELVENSQPLVYCLMQH 270
Query: 181 KSSLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHVEGITEIVLHPTEQFLF 240
KSSLTGL+TMSG SMS+IISSSLDGSLKFWDLMSGMI+GTQ H+EGIT IVLHPTEQ LF
Sbjct: 271 KSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIKGTQAHIEGITAIVLHPTEQVLF 330
Query: 241 SGTVDGKIFASRLEFGLDNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIW 300
SGTVDG+I ASRLE G DNCIT+KE+Q+ A GHKGAITALAFSQ DL+SASEDCTVCIW
Sbjct: 331 SGTVDGQISASRLELGFDNCITVKENQILAPKGHKGAITALAFSQTDLISASEDCTVCIW 390
Query: 301 DIDSQRIIQKLDHKKGRITNLVAVPRSSLLISTSNRKRVLKQF-----DKYPQPANLSTS 360
DI QRIIQKLDHKKGRITNLVA+PRSS LISTSNRKRVL QF DKYPQPANL S
Sbjct: 391 DISRQRIIQKLDHKKGRITNLVAIPRSS-LISTSNRKRVLNQFSMSSLDKYPQPANLMKS 450
Query: 361 TIPLFPSSRPLGENPNLVGFTSAGSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMT 420
TIPLF S +PL EN N +GFTS SLNQQI DMKTEGTSAAIQMKV+T L+ RMWASRMT
Sbjct: 451 TIPLFSSLQPLQENLNSIGFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMT 510
Query: 421 KQVMEMNNHLQSKLLDMMQTRLF--------PKKRKDQRDRVARTREKHPLSFH 462
KQVM+MNNHLQS++LDMM+ RLF KK+KD+RDRVA+ EK P SFH
Sbjct: 511 KQVMDMNNHLQSRVLDMMRIRLFEPTKINSSSKKQKDERDRVAKKMEKLPSSFH 563
BLAST of Carg06790 vs. TrEMBL
Match:
tr|A0A1S4DU54|A0A1S4DU54_CUCME (protein ROOT INITIATION DEFECTIVE 3-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484316 PE=4 SV=1)
HSP 1 Score: 538.9 bits (1387), Expect = 1.1e-149
Identity = 294/474 (62.03%), Postives = 322/474 (67.93%), Query Frame = 0
Query: 1 MSNVGETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTR 60
M N GE+MALAVCSD+NMG GITIWD KTG+TLLHIP+CASP YG I LRNEF VASQTR
Sbjct: 91 MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPSCASPPYGFICLRNEFFVASQTR 150
Query: 61 KEGSVGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWEVGSGK 120
KEGSVGGG++F+WSL+KPQ P+ SY LE IGPLASTKD VYLAGG HSGNIHLWE
Sbjct: 151 KEGSVGGGTIFIWSLNKPQPPVMSYTLETIGPLASTKDSVYLAGGTHSGNIHLWE----- 210
Query: 121 LLKLWSGHHKPIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGSAQPILYCLMEH 180
Sbjct: 211 ------------------------------------------------------------ 270
Query: 181 KSSLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHVEGITEIVLHPTEQFLF 240
FWDLMSGMI+GTQ H+EGIT IVLHPTEQ LF
Sbjct: 271 ----------------------------FWDLMSGMIKGTQAHIEGITAIVLHPTEQVLF 330
Query: 241 SGTVDGKIFASRLEFGLDNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIW 300
SGTVDG+I ASRLE G DNCIT+KE+Q+ A GHKGAITALAFSQ DL+SASEDCTVCIW
Sbjct: 331 SGTVDGQISASRLELGFDNCITVKENQILAPKGHKGAITALAFSQTDLISASEDCTVCIW 390
Query: 301 DIDSQRIIQKLDHKKGRITNLVAVPRSSLLISTSNRKRVLKQF-----DKYPQPANLSTS 360
DI QRIIQKLDHKKGRITNLVA+PRSS LISTSNRKRVL QF DKYPQPANL S
Sbjct: 391 DISRQRIIQKLDHKKGRITNLVAIPRSS-LISTSNRKRVLNQFSMSSLDKYPQPANLMKS 450
Query: 361 TIPLFPSSRPLGENPNLVGFTSAGSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMT 420
TIPLF S +PL EN N +GFTS SLNQQI DMKTEGTSAAIQMKV+T L+ RMWASRMT
Sbjct: 451 TIPLFSSLQPLQENLNSIGFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMT 470
Query: 421 KQVMEMNNHLQSKLLDMMQTRLF--------PKKRKDQRDRVARTREKHPLSFH 462
KQVM+MNNHLQS++LDMM+ RLF KK+KD+RDRVA+ EK P SFH
Sbjct: 511 KQVMDMNNHLQSRVLDMMRIRLFEPTKINSSSKKQKDERDRVAKKMEKLPSSFH 470
BLAST of Carg06790 vs. TrEMBL
Match:
tr|A0A2N9EKD8|A0A2N9EKD8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3145 PE=4 SV=1)
HSP 1 Score: 484.6 bits (1246), Expect = 2.5e-133
Identity = 247/436 (56.65%), Postives = 317/436 (72.71%), Query Frame = 0
Query: 9 ALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTRKEGSVGGG 68
AL VCSDK+MG GITIWD TG+ LLHIPTCASPS+GL+ LRN+FLVASQ K GSVGGG
Sbjct: 7 ALVVCSDKSMGIGITIWDLDTGDHLLHIPTCASPSHGLLCLRNQFLVASQIHKHGSVGGG 66
Query: 69 SMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWEVGSGKLLKLWSGH 128
++F W+L+KPQSPLRSYP+E IG L+ TKDG+YLAGGA SGN +LWE+ +G+LLK W H
Sbjct: 67 AIFTWALNKPQSPLRSYPVEAIGSLSCTKDGLYLAGGALSGNAYLWEISNGRLLKTWHAH 126
Query: 129 HKPIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGSAQPILYCLMEHKSSLTGLI 188
HK + +LFS DDS LI+GS DGMICVW ISLLD+E GS+ +L+ EH+SS+TGL+
Sbjct: 127 HKSLNCLLFSNDDSLLISGSDDGMICVWPAISLLDMEDSGSSPSLLHYSSEHRSSITGLL 186
Query: 189 TMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHVEGITEIVLHPTEQFLFSGTVDGKI 248
T S S+S+++SSSLDG+ K WD +SG + TQ + IT IVLHP EQ LF G+VDG I
Sbjct: 187 TTSSSSISVLVSSSLDGTCKVWDFVSGRLIQTQVYPLAITAIVLHPEEQLLFCGSVDGSI 246
Query: 249 FASRLEFG-LDNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIWDIDSQRI 308
F ++L+ G L++ I E+Q GH G ITAL FS++ L+SASEDCT+C+WD+ + I
Sbjct: 247 FVNKLDIGLLEDPFFIAEAQPVVLKGHNGGITALTFSELGLISASEDCTICMWDVVNWVI 306
Query: 309 IQKLDHKKGRITNLVAVPRSSLLISTSNRKRVLKQF-----DKYPQPANLSTSTIPLFPS 368
I++ +H KG +TNL +P+SS L S SN +RV QF DKYPQPAN TI
Sbjct: 307 IRRFNHGKGAVTNLTVIPQSS-LHSVSNHQRVSNQFHVSLLDKYPQPANSFKGTITPPSL 366
Query: 369 SRPLGENPNLVGFTSAGSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMTKQVMEMN 428
E + F S SL Q IFD++ + T A+QMKV+T +++RMWA+RMTK VMEMN
Sbjct: 367 CHSYEEKQTSLDFRSTDSLQQHIFDLEKKRTPEAVQMKVETCIENRMWATRMTKHVMEMN 426
Query: 429 NHLQSKLLDMMQTRLF 439
HLQ++LLD+M+ R+F
Sbjct: 427 KHLQTRLLDLMECRMF 441
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022954958.1 | 5.1e-263 | 99.78 | protein ROOT INITIATION DEFECTIVE 3-like [Cucurbita moschata] | [more] |
| XP_023542664.1 | 7.7e-259 | 98.05 | protein ROOT INITIATION DEFECTIVE 3-like [Cucurbita pepo subsp. pepo] | [more] |
| XP_022994395.1 | 3.2e-257 | 98.05 | protein ROOT INITIATION DEFECTIVE 3-like [Cucurbita maxima] | [more] |
| KGN64400.1 | 1.6e-211 | 79.96 | hypothetical protein Csa_1G050390 [Cucumis sativus] | [more] |
| XP_016899510.1 | 1.3e-210 | 78.90 | PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like isoform X1 [Cucumis melo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G49180.1 | 2.1e-56 | 33.71 | Transducin/WD40 repeat-like superfamily protein | [more] |
| AT2G45540.2 | 6.3e-05 | 34.38 | WD-40 repeat family protein / beige-related | [more] |
| AT1G49040.1 | 2.4e-04 | 29.55 | stomatal cytokinesis defective / SCD1 protein (SCD1) | [more] |
| AT2G25420.1 | 9.1e-04 | 21.26 | transducin family protein / WD-40 repeat family protein | [more] |
