Cp4.1LG09g09590 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g09590
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionWD-repeat protein, putative
LocationCp4.1LG09 : 8632537 .. 8636689 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGGCGGCGGCGGTGGCGGTGGCGGCAAATTGACTGCACGGAGTTCACTAGCGCCGAGAGGATTCTGGCTCGTTGATCCCTGAAGCCAAACTTGGAAGGTGAACCGAAAGTTCAAATCGTTTCAACTGATTTTGTCTCTTTCAATTGACAGGCGTCATTGAATTGAATGCACGCGCATAAGCAGTCGGGCCTTCGCATGCATTACCTCCATAGCCTCCATTAATGGGAGAATTTTTGCTTTCATCTCTTCCAACGTCAAAAAATGAGCAATGTTGGCGAAACAATGGCGTTGGCTGTGTGCAGCGACAAGAACATGGGATCAGGGATTACGATTTGGGATCCAAAAACAGGCGAAACTCTCCTTCATATTCCGACTTGCGCTTCGCCTTCTTATGGTTTAATTTCTTTGAGAAACGAGTTCCTTGTTGCTTCTCAGACTCGTAAGGAAGGCTCCGTTGGTGGTGGATCCATGTTCGTTTGGTCCCTGAGCAAGGTATTGAACTATCGATTAATCTGCTTTTGAATACACATTTTCTTTCAGATGCTATCATTGTTTGTATAATCATAGACGATTCGATTCTTTACAAACACGCTTGAGTAATCTTGAACTCGATTTATATTAAGAACTCACTTGTTCGATTTTAGGGGTGATTTACAATATTAAGCCCTAAATCATTGTGCCTTTTCAGCCTCAGTCCCCTCTTAGGAGCTATCCATTGGAGCCTATTGGACCACTTGCTTCAACAAAGGACGGTGTATATCTTGCAGGCGGAGCTCATTCCGGTAATATTCATCTCTGGGAGGTCAGTAGTTGGCTGAAATTCTCTTGTTTTTTCATCCAGTATGTGGGTATCTATATGCATATATGTGATAATTCAATATTGATTTGGTTGTTCATCTTATTTTCAATCCATTTTGTATATCTGTATGAGAATTTGTACATAAACATCCTTCAGAGTCTCATTTGGTTGAGGCCGTTGGATGATGAAAGTCCCACATCGACTAATTTAGGGAATGATCATGTGTTTATAAACAAAGAATACTCTCTCCATTGGTATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAACATGGTATCAGAGCCATGCTCTAAACTTAGTCGTGCCAATCGCCAATAGATTGGTAACTCCTCAAATATCGAACAAAGGACTCCAAAAGAGGCAGTAAAAAATGACTAAGACTCCAAAGGAGTCGAACCTCGATTAAGGGGAGGCGCATTTTGTTCGAGGGGAGGTGTTGGATGATGAAAGTCCCACATCGGCTAATTTAGGGAATGATCATGTCTTTATAAACAAAGAATACTCTCTCCATTGGTATGAGGCCTTTTGAGGAACCCAAAACAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAACCGAGGCAATTTGCAGGTTGGTAGTGGTAAATTGCTTAAGCTTTGGAGTGGGCATCATAAGCCCATAAAATTCATCCTGTTTTCTTGGGACGATTCGTTTCTCATTACTGGTTCGGCCGATGGAATGATTTGTGTCTGGTCCATGATTAGGTAAATGTATTCTCTTCACAATGCCTTTACAACCTCTTTGATTGATGCATTTTCGGTAGCTTTTCGTCGTTGTAATTTTTCCCTCGAACTTTATGCTAGTTTGCTGGATGTGGAACTTGTGGGAACTGCACAGCCAATGTTATACTGTCTCATAGAACATAAGTCGCCTTTAACTGGTCTAATTACTATGTCTGGCTACTCGATGTCGATGATCATTTCAAGCTCCCTCGATGGCAGTTTAAAGGTTGGTGAACTGTAACATTGTATCTATTATTCTTTTGAGGTCTGGTAAACTTATAGCTTGATTAACATGTCTGGGTTGCAGTTTTGGGATTTAATGTCGGGAATGATTCGGGGAACTCAAGGTCATTTAGAGGGAATCACTGAGATTGTTCTTCATCCAACTGAGCAATTTCTGTTCTCTGGGACTGTTGATGGGAAAATTTTTGCTAGCAGGCTTGAATTTGGATTGGATAACTGCATTACCATTAAAGAAAGTCAATTATTTGCATCAACAGGACACAAGTAATGTATGCTACTTGGAAATTTCTCTGTGTTGTTTGTAGTACGACTTTCCTTTTCTGTTATTTTTTAAATTCTTATTATCGTCGTTCTAAGATCCCACATCAGTTGGAAAGAGAAACAAAGCATTCTATAAGGGTGTGGAAACCTCTCCCTTGTAGACGTGTTTTAAAAACATTGAAGGGAAGCCTGAAAGTGAAAACCCAAAGAGGACAATATCTGCTAGCGGTGGATTTGAGCTGTTATTTATGGTATCAAAGCCAGACACCAGGCGGTGTGCCAACAAGGACGCTGGGCCCCTAAGGGGGTGGATTGTGAGATCCCGCATCGGTTGGAGAGGAGAACAAAACATTTCTTATAAGGGTGTGGAAACCTCTCCCTAGTATTCGCGTTTTAAAAACCTTGAGGGGAAGCCCGAACTTGAAAACCCAAAGAGAACAATATTTGCTAGTGGTGGGTTTTGGCTGTTACACATGGTATCAAAGCCAGACATCGAGCGGTGTGTCAGCGACGACACAGGGCCCCAAGAGAGTGGATTGTGAGAACCCACATTAGTTGGAGAGGGGAACGAAACATTCCTTATAAGGGTGTGGGAACCTCTCCCTAGTAGAGGCGTTTTAAAAACCTTGAGAGGAGAATCTCAAATGGAAAAGTAAAAAAAAGGACAATATCTGCTAGTGATGGGCTTGGGCTTGAGCGGTTACACTATAAATATTTTCTTTCCTTTGACAACAATTAATATTATACAAGCTGCAAGACCATCTTTGTTCCTTTGCCTTGTACACTTTAATGGTAACTTCATTGTTCAAGTTTCCACCATTAATGCAGGGGAGCTATTACTGCTCTGGCCTTCAGTCAAATGGATCTAGTTTCTGCATCCGAGGATTGCACAGTCTGCATATGGGACATCGATAGTCAGAGGATCATTCAAAAGCTTGACCACAAGAAAGGTAATTACTCCTCAGATGTAATTTTCTTGTTCGAGGCAATTTAATGTTCTGTTATTCGTGTCCTTTTGTCGATGAACACGAACTTATATGGTATCTATCAACAGGGAGAATAACCAACTTGGTAGCATTTCCACGGTCGTCGCTGCTGATCTCTACGTCAAACCGTAAGAGAGTCTTGAAACAGTTCGACAAGTATCCCCAGCCAGCCAACTTGTCGACGAGCACAATACCTCTCTTTCCCTCTTCCCGACCCCTCGGGGAGAATCCAAATCTCGTCGGATTCACAAGTGCCAGTTCACTGAATCAGCAAATATTTGATATGAAGGTCACTCTCTCTTTCAACTCTTCTACATTGTGCCTTTACTGTAGCTGCTAAGTAAGTCCAATGGATAAAGTGCAGCTTGTATTATCAATATATTCATACTCCCTTGCCATTGTGTGTTCAGACAGAAGGGACATCAGCAGCAATACAGATGAAAGTCGATACACGTTTACAAAGCCGAATGTGGGCGTCTAGAATGACGAAGCAAGTTATGGAGATGAACAACCATCTTCAATCACAGTTGCTTGACATGATGCAGACTCGTTTGTTCCCGAAGAAACGAAAAGATCAAAGAGATCGAGTCGCTCGGACTAGGGAGAAGCATCCATTGTCATTCAATTGATCTTTAGATGATCTTGGGGACCGGCTGTAAGTGATAAACCTTTTTGTTCTTTTTCTGGGTCTGTTCCTTAGTTTCATGTTTGCTAAATTTCCATTTCTAGATTTGTTCTACCAATTGCTGCTTTGAAGTTTGGGTCTAACTTCTTTAACAAGTATGGTTTTAATAAAATGTTTCATTATTTTACAAATCATGGAGGGGAGATGAGTGTTTAAATACTATTTAATTAGGGATTTCTCTCATTTTCTTTTAGGTTTAGGGTCGTGTGACCTATATGGGTCACCACCTCATGTATTTATAGATGTGTATAAAGAGGAGGATCACATGGTAGGCCTTGATCCATGTAACAAGGAAATCATATATTCTCTTTCATTCATGTA

mRNA sequence

CGGGCGGCGGCGGTGGCGGTGGCGGCAAATTGACTGCACGGAGTTCACTAGCGCCGAGAGGATTCTGGCTCGTTGATCCCTGAAGCCAAACTTGGAAGGTGAACCGAAAGTTCAAATCGTTTCAACTGATTTTGTCTCTTTCAATTGACAGGCGTCATTGAATTGAATGCACGCGCATAAGCAGTCGGGCCTTCGCATGCATTACCTCCATAGCCTCCATTAATGGGAGAATTTTTGCTTTCATCTCTTCCAACGTCAAAAAATGAGCAATGTTGGCGAAACAATGGCGTTGGCTGTGTGCAGCGACAAGAACATGGGATCAGGGATTACGATTTGGGATCCAAAAACAGGCGAAACTCTCCTTCATATTCCGACTTGCGCTTCGCCTTCTTATGGTTTAATTTCTTTGAGAAACGAGTTCCTTGTTGCTTCTCAGACTCGTAAGGAAGGCTCCGTTGGTGGTGGATCCATGTTCGTTTGGTCCCTGAGCAAGCCTCAGTCCCCTCTTAGGAGCTATCCATTGGAGCCTATTGGACCACTTGCTTCAACAAAGGACGGTGTATATCTTGCAGGCGGAGCTCATTCCGGTAATATTCATCTCTGGGAGCCCATAAAATTCATCCTGTTTTCTTGGGACGATTCGTTTCTCATTACTGGTTCGGCCGATGGAATGATTTGTGTCTGGTCCATGATTAGTTTGCTGGATGTGGAACTTGTGGGAACTGCACAGCCAATGTTATACTGTCTCATAGAACATAAGTCGCCTTTAACTGGTCTAATTACTATGTCTGGCTACTCGATGTCGATGATCATTTCAAGCTCCCTCGATGGCAGTTTAAAGTTTTGGGATTTAATGTCGGGAATGATTCGGGGAACTCAAGGTCATTTAGAGGGAATCACTGAGATTGTTCTTCATCCAACTGAGCAATTTCTGTTCTCTGGGACTGTTGATGGGAAAATTTTTGCTAGCAGGCTTGAATTTGGATTGGATAACTGCATTACCATTAAAGAAAGTCAATTATTTGCATCAACAGGACACAAGGGAGCTATTACTGCTCTGGCCTTCAGTCAAATGGATCTAGTTTCTGCATCCGAGGATTGCACAGTCTGCATATGGGACATCGATAGTCAGAGGATCATTCAAAAGCTTGACCACAAGAAAGGGAGAATAACCAACTTGGTAGCATTTCCACGGTCGTCGCTGCTGATCTCTACGTCAAACCGTAAGAGAGTCTTGAAACAGTTCGACAAGTATCCCCAGCCAGCCAACTTGTCGACGAGCACAATACCTCTCTTTCCCTCTTCCCGACCCCTCGGGGAGAATCCAAATCTCGTCGGATTCACAAGTGCCAGTTCACTGAATCAGCAAATATTTGATATGAAGACAGAAGGGACATCAGCAGCAATACAGATGAAAGTCGATACACGTTTACAAAGCCGAATGTGGGCGTCTAGAATGACGAAGCAAGTTATGGAGATGAACAACCATCTTCAATCACAGTTGCTTGACATGATGCAGACTCGTTTGTTCCCGAAGAAACGAAAAGATCAAAGAGATCGAGTCGCTCGGACTAGGGAGAAGCATCCATTGTCATTCAATTGATCTTTAGATGATCTTGGGGACCGGCTGTAAGTGATAAACCTTTTTGTTCTTTTTCTGGGTCTGTTCCTTAGTTTCATGTTTGCTAAATTTCCATTTCTAGATTTGTTCTACCAATTGCTGCTTTGAAGTTTGGGTCTAACTTCTTTAACAAGTATGGTTTTAATAAAATGTTTCATTATTTTACAAATCATGGAGGGGAGATGAGTGTTTAAATACTATTTAATTAGGGATTTCTCTCATTTTCTTTTAGGTTTAGGGTCGTGTGACCTATATGGGTCACCACCTCATGTATTTATAGATGTGTATAAAGAGGAGGATCACATGGTAGGCCTTGATCCATGTAACAAGGAAATCATATATTCTCTTTCATTCATGTA

Coding sequence (CDS)

ATGAGCAATGTTGGCGAAACAATGGCGTTGGCTGTGTGCAGCGACAAGAACATGGGATCAGGGATTACGATTTGGGATCCAAAAACAGGCGAAACTCTCCTTCATATTCCGACTTGCGCTTCGCCTTCTTATGGTTTAATTTCTTTGAGAAACGAGTTCCTTGTTGCTTCTCAGACTCGTAAGGAAGGCTCCGTTGGTGGTGGATCCATGTTCGTTTGGTCCCTGAGCAAGCCTCAGTCCCCTCTTAGGAGCTATCCATTGGAGCCTATTGGACCACTTGCTTCAACAAAGGACGGTGTATATCTTGCAGGCGGAGCTCATTCCGGTAATATTCATCTCTGGGAGCCCATAAAATTCATCCTGTTTTCTTGGGACGATTCGTTTCTCATTACTGGTTCGGCCGATGGAATGATTTGTGTCTGGTCCATGATTAGTTTGCTGGATGTGGAACTTGTGGGAACTGCACAGCCAATGTTATACTGTCTCATAGAACATAAGTCGCCTTTAACTGGTCTAATTACTATGTCTGGCTACTCGATGTCGATGATCATTTCAAGCTCCCTCGATGGCAGTTTAAAGTTTTGGGATTTAATGTCGGGAATGATTCGGGGAACTCAAGGTCATTTAGAGGGAATCACTGAGATTGTTCTTCATCCAACTGAGCAATTTCTGTTCTCTGGGACTGTTGATGGGAAAATTTTTGCTAGCAGGCTTGAATTTGGATTGGATAACTGCATTACCATTAAAGAAAGTCAATTATTTGCATCAACAGGACACAAGGGAGCTATTACTGCTCTGGCCTTCAGTCAAATGGATCTAGTTTCTGCATCCGAGGATTGCACAGTCTGCATATGGGACATCGATAGTCAGAGGATCATTCAAAAGCTTGACCACAAGAAAGGGAGAATAACCAACTTGGTAGCATTTCCACGGTCGTCGCTGCTGATCTCTACGTCAAACCGTAAGAGAGTCTTGAAACAGTTCGACAAGTATCCCCAGCCAGCCAACTTGTCGACGAGCACAATACCTCTCTTTCCCTCTTCCCGACCCCTCGGGGAGAATCCAAATCTCGTCGGATTCACAAGTGCCAGTTCACTGAATCAGCAAATATTTGATATGAAGACAGAAGGGACATCAGCAGCAATACAGATGAAAGTCGATACACGTTTACAAAGCCGAATGTGGGCGTCTAGAATGACGAAGCAAGTTATGGAGATGAACAACCATCTTCAATCACAGTTGCTTGACATGATGCAGACTCGTTTGTTCCCGAAGAAACGAAAAGATCAAAGAGATCGAGTCGCTCGGACTAGGGAGAAGCATCCATTGTCATTCAATTGA

Protein sequence

MSNVGETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTRKEGSVGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWEPIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGTAQPMLYCLIEHKSPLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHLEGITEIVLHPTEQFLFSGTVDGKIFASRLEFGLDNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIWDIDSQRIIQKLDHKKGRITNLVAFPRSSLLISTSNRKRVLKQFDKYPQPANLSTSTIPLFPSSRPLGENPNLVGFTSASSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMTKQVMEMNNHLQSQLLDMMQTRLFPKKRKDQRDRVARTREKHPLSFN
Homology
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BLAST of Cp4.1LG09g09590 vs. Swiss-Prot
Match: RID3_ARATH (Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana GN=RID3 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.6e-44
Identity = 139/445 (31.24%), Postives = 220/445 (49.44%), Query Frame = 1 

Query: 8   MALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTRKEGSVGG 67
           M + V +  ++  GI  WD KTG   L    CASP++GL ++  +FL +SQ     +   
Sbjct: 1   MEITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNT--S 60

Query: 68  GSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWE------------ 127
           GS+F WS +KPQ+ ++SYP+EPI  LA+  +G YL GG  SG+I+LWE            
Sbjct: 61  GSIFYWSWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHG 120

Query: 128 ---PIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGTAQPMLY--CLIEHKSPLT 187
               +  ++FS DDS L++GS DG I VWS+I L D +        LY     EH   +T
Sbjct: 121 HYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFD-DFQRQQGNTLYEHNFNEHTMSVT 180

Query: 188 GLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHLEGITEIVLHPTEQFLFSGTVD 247
            ++   G   ++IISSS D + K W L  G +         I  + L P     ++G  D
Sbjct: 181 DIVIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARD 240

Query: 248 GKIFASRLEFGLDNCITIKESQLFASTGHKG-AITALAFSQMD--LVSASEDCTVCIWDI 307
            KI+      G  N  +   +Q+  S   KG AIT LA+      L+S SED  VC+WD 
Sbjct: 241 SKIY-----IGAINATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDP 300

Query: 308 DSQRIIQKLDH----KKGRITNLVAFPRSSLLISTSNRKRVL---------KQFDKYPQP 367
            S R ++ L H    +KG + N+    ++  +++ SN+ +V             +KY +P
Sbjct: 301 KSLRHVRTLIHAKGSRKGPVNNIQIVRKT--IVANSNKTQVSWKSRGALIPPPLEKYERP 360

Query: 368 ANLSTSTIPLFPSSRPLGENPNLVGFTSASSLNQQIFDMKTEGTSAAIQMKVDTRLQSRM 420
              +   I +     P  + P    F SA  +++Q+ +++ +G SAA +M+++ RL+   
Sbjct: 361 VEDTMDGI-VTVDPPPFSDVPVYSSFLSADLIDEQVKELQQQG-SAATEMEME-RLKLEY 420

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BLAST of Cp4.1LG09g09590 vs. Swiss-Prot
Match: WDR18_DANRE (WD repeat-containing protein 18 OS=Danio rerio GN=wdr18 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 6.7e-22
Identity = 90/344 (26.16%), Postives = 161/344 (46.80%), Query Frame = 1 

Query: 24  IWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTRKEGSVGGGSMFVWSLSKPQSPLR 83
           ++DP TG   L      + S  L  L  E+++ +Q      +G   + VW + + +  L+
Sbjct: 22  VYDPHTGSEFLSYRGGNTSSRSLTILNGEYILGAQ------LGKNYINVWEIQR-KDQLQ 81

Query: 84  SYPLEP--IGPLASTKDGVYLAGGAHSGNIHLWE---------------PIKFILFSWDD 143
              + P  +  L ++ DG+Y+  G     I+LWE                +  I F+ D 
Sbjct: 82  QKIVCPGIVTCLCASPDGLYVLAGIAEA-IYLWEVSTGNLLAILSRHFQDLSCIKFTDDS 141

Query: 144 SFLITGSADGMICVWSMISLLDVELVGTAQPMLYCLIEHKSPLTGLITMSGYSMSMIISS 203
           S  ++G  D +  +W++ S++ ++   T +P  + L  H  P+T +        + + ++
Sbjct: 142 SHFVSGGKDNLAFIWNLSSVVQLDSSRTPEPR-HILSRHSLPITDIHCGLMGPQARVATA 201

Query: 204 SLDGSLKFWDLMSGMIRGTQGHLEGITEIVLHPTEQFLFSGTVDGKIF-ASRLEFGLDNC 263
           SLD ++K W++ SG +  +     GI  +   P E FLF G  DG IF  S     L   
Sbjct: 202 SLDQTVKVWEISSGEMLLSVLFDVGIMSVTFDPCEYFLFCGGSDGNIFQVSLCSTSLSRD 261

Query: 264 ITIKE----SQLFASTGHKGAITALAFSQMD---LVSASEDCTVCIWDIDSQRIIQKLDH 323
            T +     +Q+F   GH+  +T L+ S MD   L+S S D TV +WD+ S++ I  ++H
Sbjct: 262 KTFQSDSEGNQVFK--GHRNLVTCLSVS-MDGTVLLSGSNDETVRMWDVQSKQCIWTINH 321

Query: 324 KKGRITNLVAFPR-SSLLISTSNRKRVLKQFDKYPQPANLSTST 342
            +G +TN    P  +++ +S S+    L +F ++  P+     T
Sbjct: 322 -RGPVTNAAIIPAPANMFLSDSHPAVPLPRFSRHLNPSEQGDGT 352

[Close]
BLAST of Cp4.1LG09g09590 vs. Swiss-Prot
Match: WDR18_BOVIN (WD repeat-containing protein 18 OS=Bos taurus GN=WDR18 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 9.7e-21
Identity = 91/347 (26.22%), Postives = 154/347 (44.38%), Query Frame = 1 

Query: 8   MALAVCSDKNMGS-GITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTRKEGSVG 67
           M +AVC+D         +W+  +G  LL      +   GL  L  E+L+A+Q      +G
Sbjct: 5   MEVAVCTDSAAQLWSCVVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQ------LG 64

Query: 68  GGSMFVWSLS-KPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWE---------- 127
              +  W L  K Q   +     P+  L ++ +G+Y+  G  S NI+LWE          
Sbjct: 65  KNYICAWELQRKDQLQQKIMCPGPVTCLTTSPNGLYVLAGI-SENIYLWEVSTGNLLVIL 124

Query: 128 -----PIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGTAQPMLYCLIEHKSPLT 187
                 +  + F+ D S  I+G  D ++  WS+ S+L  +   T  P  +    H  P+T
Sbjct: 125 SRHYQDVSCLQFTGDSSHFISGGKDCLVLAWSLCSVLQADPSRTPAPR-HVWSRHTLPIT 184

Query: 188 GLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHLEGITEIVLHPTEQFLFSGTVD 247
            L    G  ++ + ++SLD ++K W++ SG +  +     GI  + +   E ++F G  D
Sbjct: 185 DLHCGFGGPLARVATASLDQTVKLWEVSSGELLLSVLFDVGILAVTMDLAEHYMFCGGSD 244

Query: 248 GKIFASRL---EFGLDNCITIKESQLFASTGHKGAITALAFSQMD--LVSASEDCTVCIW 307
           G IF   L       +     ++       GH+  +T L+ S     L+S S D TV +W
Sbjct: 245 GSIFQVDLCTWPGQREKSFQPEQEHGKVFRGHRNQVTCLSVSTDGSVLLSGSHDETVRLW 304

Query: 308 DIDSQRIIQKLDHKKGRITN-LVAFPRSSLLISTSNRKRVLKQFDKY 332
           D+ SQ+ ++ +   KG +TN  +     S+L S       L  F+K+
Sbjct: 305 DVQSQQCLRTVT-LKGPVTNACIMLAPVSMLSSDFRPGLPLPHFNKH 342

[Close]
BLAST of Cp4.1LG09g09590 vs. Swiss-Prot
Match: WDR18_HUMAN (WD repeat-containing protein 18 OS=Homo sapiens GN=WDR18 PE=1 SV=2)

HSP 1 Score: 96.7 bits (239), Expect = 7.0e-19
Identity = 92/348 (26.44%), Postives = 155/348 (44.54%), Query Frame = 1 

Query: 8   MALAVCSDKN--MGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTRKEGSV 67
           M +AVC+D    M S I +W+  +G  LL      +   GL  L  E+L+A+Q      +
Sbjct: 5   MEVAVCTDSAAPMWSCI-VWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQ------L 64

Query: 68  GGGSMFVWSLS-KPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWE--------- 127
           G   +  W L  K Q   +     P+  L ++ +G+Y+  G  + +IHLWE         
Sbjct: 65  GKNYISAWELQRKDQLQQKIMCPGPVTCLTASPNGLYVLAGV-AESIHLWEVSTGNLLVI 124

Query: 128 ------PIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGTAQPMLYCLIEHKSPL 187
                  +  + F+ D S  I+G  D ++ VWS+ S+L  +      P  +    H  P+
Sbjct: 125 LSRHYQDVSCLQFTGDSSHFISGGKDCLVLVWSLCSVLQADPSRIPAPR-HVWSHHALPI 184

Query: 188 TGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHLEGITEIVLHPTEQFLFSGTV 247
           T L    G  ++ + +SSLD ++K W++ SG +  +      I  + +   E  +F G  
Sbjct: 185 TDLHCGFGGPLARVATSSLDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLAEHHMFCGGS 244

Query: 248 DGKIFASRL---EFGLDNCITIKESQLFASTGHKGAITALAFSQMD--LVSASEDCTVCI 307
           +G IF   L       +     ++       GH+  +T L+ S     L+S S D TV +
Sbjct: 245 EGSIFQVDLFTWPGQRERSFHPEQDAGKVFKGHRNQVTCLSVSTDGSVLLSGSHDETVRL 304

Query: 308 WDIDSQRIIQKLDHKKGRITN-LVAFPRSSLLISTSNRKRVLKQFDKY 332
           WD+ S++ I+ +   KG +TN  +     S+L S       L  F+K+
Sbjct: 305 WDVQSKQCIRTV-ALKGPVTNAAILLAPVSMLSSDFRPSLPLPHFNKH 342

[Close]
BLAST of Cp4.1LG09g09590 vs. Swiss-Prot
Match: KTNB1_DANRE (Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio GN=katnb1 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.2e-12
Identity = 60/227 (26.43%), Postives = 102/227 (44.93%), Query Frame = 1 

Query: 106 AHSGNIHLWEPIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGTAQPMLYCLIEH 165
           AHS N+        +L       L TG  D  + +W++           ++P     +  
Sbjct: 18  AHSSNVS-----SLVLGKSSGRLLATGGEDCRVNIWAV-----------SKPNCIMSLTG 77

Query: 166 KSPLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMI-RGTQGHLEGITEIVLHPTEQFL 225
            +   G I  +  S   +++ SL GSL+ WDL +  I R   GH   I+ +  HP  ++L
Sbjct: 78  HTSAVGCIQFNS-SEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYL 137

Query: 226 FSGTVDGKIFASRLEFGLDNCITIKESQLFASTGHKGAITALAFSQMD--LVSASEDCTV 285
            SG+VD  I    +          ++  +F   GH  A+  LAFS     L SAS+D TV
Sbjct: 138 ASGSVDSNIKLWDVR---------RKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTV 197

Query: 286 CIWDIDSQRIIQKLDHKKGRITNLVAFPRSSLLISTSNRKRVLKQFD 330
            +WD+ + ++I +       + N+V F  +  L+++ +  R +K +D
Sbjct: 198 KLWDLIAGKMITEFTSHTSAV-NVVQFHPNEYLLASGSADRTVKLWD 217

[Close]
BLAST of Cp4.1LG09g09590 vs. TrEMBL
Match: A0A0A0LR59_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050390 PE=4 SV=1)

HSP 1 Score: 696.8 bits (1797), Expect = 1.7e-197
Identity = 362/474 (76.37%), Postives = 396/474 (83.54%), Query Frame = 1 

Query: 1   MSNVGETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTR 60
           M N GE+MALAVCSD+NMG GITIWD KTG+TLLHIPTCASP YG I LRNEF VASQTR
Sbjct: 1   MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVASQTR 60

Query: 61  KEGSVGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWE----- 120
           KEGSVGGGS+F+WSL+KP  P+ SY LE IGPLASTKDGVYLAGG HSGNIHLWE     
Sbjct: 61  KEGSVGGGSIFIWSLNKPLPPVTSYTLETIGPLASTKDGVYLAGGTHSGNIHLWEVGSGE 120

Query: 121 ----------PIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGTAQPMLYCLIEH 180
                     P+K +LFSWDDSFLITGS+DGMICVWSMISLLDVELVG +QP++YCL+EH
Sbjct: 121 LLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISLLDVELVGNSQPIVYCLMEH 180

Query: 181 KSPLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHLEGITEIVLHPTEQFLF 240
            S LTGL+TMSG SMS+IISSSLDGSLKFWDLMSGMIRGTQ H+EGIT IVLHPTEQ LF
Sbjct: 181 NSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLF 240

Query: 241 SGTVDGKIFASRLEFGLDNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIW 300
           SGTVDG+IFASRLEFG DNCITI+E+Q+ A  GHKGAITALAFSQM L+SASEDCTVCI 
Sbjct: 241 SGTVDGQIFASRLEFGFDNCITIRENQILAPKGHKGAITALAFSQMYLISASEDCTVCIR 300

Query: 301 DIDSQRIIQKLDHKKGRITNLVAFPRSSLLISTSNRKRVLKQ-----FDKYPQPANLSTS 360
           DI SQRIIQKLDHKKGRITNLVA PRSSL ISTSNRKRV  Q      DKYPQPANL  S
Sbjct: 301 DISSQRIIQKLDHKKGRITNLVAIPRSSL-ISTSNRKRVSNQSSMSSLDKYPQPANLMKS 360

Query: 361 TIPLFPSSRPLGENPNLVGFTSASSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMT 420
           TIPLF S +PLGEN N + FTS SSLNQQI DMKTEGTSAAIQMKV+T L+ RMWASRMT
Sbjct: 361 TIPLFSSIQPLGENLNSIRFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMT 420

Query: 421 KQVMEMNNHLQSQLLDMMQTRLF--------PKKRKDQRDRVARTREKHPLSFN 447
           K+VM+MNNHLQS+LLDMM+ RLF         KK+KD+RDRVA+ REK  LSF+
Sbjct: 421 KEVMDMNNHLQSRLLDMMRIRLFEPAKISSSSKKQKDERDRVAKKREKRTLSFH 473

[Close]
BLAST of Cp4.1LG09g09590 vs. TrEMBL
Match: B9RAI4_RICCO (WD-repeat protein, putative OS=Ricinus communis GN=RCOM_1506640 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 1.5e-113
Identity = 228/452 (50.44%), Postives = 305/452 (67.48%), Query Frame = 1 

Query: 9   ALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTRKEGSVGGG 68
           AL  CSD++MG+GI+IWD +TG+ L+HIPTCAS  +GL+ L+++FLVASQ  K GSVGGG
Sbjct: 7   ALVGCSDRSMGTGISIWDVETGDRLMHIPTCASAPHGLLCLKDQFLVASQVNKHGSVGGG 66

Query: 69  SMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWE------------- 128
           ++F W L+KPQSPLRSYPLE IGP+A T DGVYLAGG+ SGN ++WE             
Sbjct: 67  AIFTWPLNKPQSPLRSYPLEAIGPIACTTDGVYLAGGSPSGNAYIWEVTSGRLLKTWGAH 126

Query: 129 --PIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGTAQPMLYCLIEHKSPLTGLI 188
              +K ++FS DDS LI+GS DG+IC+WSMISLLD+E  G++  +L+   EHKS ++GL+
Sbjct: 127 HSSLKCMVFSNDDSLLISGSDDGIICMWSMISLLDMENSGSSSSLLHYSSEHKSSISGLL 186

Query: 189 TMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHLEGITEIVLHPTEQFLFSGTVDGKI 248
           T SG S S  ISSSLD + K WDL+SG    +Q +   IT I+LHP +QFLF+G +DG+I
Sbjct: 187 TTSGNSNSTFISSSLDATCKAWDLVSGEPIQSQEYPLAITAIILHPVDQFLFAGCIDGRI 246

Query: 249 FASRLEFGL-DNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIWDIDSQRI 308
           F S L  GL D+ + I E  L    GHKG+ITAL FS + L+SASEDCT+C+WD  S   
Sbjct: 247 FVSMLNVGLVDDPLVIAEDPLVVLEGHKGSITALTFSTLGLISASEDCTICLWDAVSWVA 306

Query: 309 IQKLDHKKGRITNLVAFPRSSLLISTSNRKRVLKQFDKYP----QPANLSTSTIPLFPSS 368
           IQ+ ++ KG +TN+V   + SLL+ +S+ +RV  +    P    QP N S  T  L  + 
Sbjct: 307 IQRFNYHKGAVTNVVVI-QHSLLLPSSSHQRVPNRLCVSPLDKCQPPNSSMGTTTLRRTC 366

Query: 369 RPLGENPNLVGFTSASSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMTKQVMEMNN 428
             L +N N +      SL +QIF+M+ E T AA+QMK +T +  RMWA+RMTK VMEMN 
Sbjct: 367 FSLDDNYNSLN-VGTISLERQIFEMEEEHTPAALQMKAETSIVQRMWATRMTKHVMEMNK 426

Query: 429 HLQSQLLDMMQTRLFPKKRKDQRDRVARTREK 441
           HLQS+LLD+MQ RL      ++ +R  + + K
Sbjct: 427 HLQSRLLDLMQIRLLWNTEDNESNRRKKKKLK 456

[Close]
BLAST of Cp4.1LG09g09590 vs. TrEMBL
Match: A5C3S0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026009 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 2.3e-109
Identity = 223/466 (47.85%), Postives = 295/466 (63.30%), Query Frame = 1 

Query: 5   GETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTRKEGS 64
           G   AL VCSD++M  GIT+WD  +G+ LLHIPTCA+  +GL+ LR +FLVASQ  + GS
Sbjct: 5   GGREALVVCSDRSMSVGITVWDMVSGDQLLHIPTCAASPHGLLCLREQFLVASQIHRHGS 64

Query: 65  VGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWE--------- 124
           +GGG++F+W L+KPQSPLR+YP+E IGP++ +KDGVY+ GGA SGN ++WE         
Sbjct: 65  LGGGAIFIWPLNKPQSPLRNYPMEAIGPVSCSKDGVYIVGGAPSGNAYIWEVADGRLLKT 124

Query: 125 ------PIKFILFSWDDSFLITGSADGMICVWSMIS------------------------ 184
                  +  ++FS DDS LI+GS DGMI VWSMIS                        
Sbjct: 125 WRAHHKSLTSMVFSDDDSLLISGSDDGMIRVWSMISKNKRFCLFLEKFEMIHFCELLINL 184

Query: 185 ---LLDVELVGTAQPMLYCLIEHKSPLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMI 244
              LLD+   G    + + L+EH S +TGL+++SG S  +++SSSLDG+ K WDL+ G +
Sbjct: 185 DGSLLDIADCGRFPSLFHSLLEHTSSITGLLSISGSSSPVLVSSSLDGTCKVWDLIRGRL 244

Query: 245 RGTQGHLEGITEIVLHPTEQFLFSGTVDGKIFASRLEFGLD-NCITIKESQLFASTGHKG 304
             T+     IT IVL P EQ LFSG+ DG+IF S L+ GL  +   + E +     GH  
Sbjct: 245 LRTRVFPTAITAIVLDPGEQLLFSGSADGRIFVSMLDTGLVVDPFKVPEDRPIVLNGHNR 304

Query: 305 AITALAFSQMDLVSASEDCTVCIWDIDSQRIIQKLDHKKGRITNLVAFPRSSLLISTSNR 364
           +ITALAFS++ LVSAS DC   +WD+ S  II++ +H KG ITN+V  P+SSLL S +N 
Sbjct: 305 SITALAFSRLGLVSASRDCAAHLWDVASGVIIRRFNHPKGAITNMVVIPKSSLL-SVTNH 364

Query: 365 KRVLKQF-----DKYPQPANLSTSTIPLFPSSRPLGENPNLVGFTSASSLNQQIFDMKTE 423
           +R   QF     DKYPQP N S   I L P       +   +GF S  SLNQQI D++ E
Sbjct: 365 QRFSNQFRVSLLDKYPQPGNSSMGMITLLPLCCSHRVHLPTIGFQSTVSLNQQILDLEQE 424

[Close]
BLAST of Cp4.1LG09g09590 vs. TrEMBL
Match: B9IF84_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s10540g PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 7.1e-103
Identity = 198/391 (50.64%), Postives = 262/391 (67.01%), Query Frame = 1 

Query: 5   GETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTRKEGS 64
           G    L VCSD+NMG+GI +WD +TG+ ++HIPTCASP +GL+ LR++FLVASQ  K GS
Sbjct: 6   GSDEVLVVCSDRNMGTGIAMWDMETGDRIMHIPTCASPLHGLLCLRDQFLVASQVNKHGS 65

Query: 65  VGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWE--------- 124
           VGGG++F WSL+KPQ PLRSYPLE IGPL  TKDG++LAGG+ SGN++LWE         
Sbjct: 66  VGGGAIFTWSLNKPQQPLRSYPLEAIGPLGCTKDGLFLAGGSPSGNVYLWEVAGGRLLKT 125

Query: 125 ------PIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGTAQPMLYCLIEHKSPL 184
                  +K ++FS DDS LI+GS DG++CVWSM+SLLD E  G++  +L+   EH S +
Sbjct: 126 WRAHSRSLKCLIFSNDDSLLISGSEDGVVCVWSMVSLLDTEDFGSSCSLLHYSSEHTSSV 185

Query: 185 TGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHLEGITEIVLHPTEQFLFSGTV 244
           TGL+T SG + S  ISSSLD + K WD+ SG +  TQ +  GIT IV  P EQ LF+G++
Sbjct: 186 TGLLTTSGIANSTFISSSLDATCKAWDVFSGRLIQTQDYPLGITAIVTDPAEQLLFAGSM 245

Query: 245 DGKIFASRLEFG-LDNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIWDID 304
           DG+IF S L+ G L++   +   +     GH G+I AL FS + L+SASEDCTVC+WD+ 
Sbjct: 246 DGRIFVSVLDIGLLEDPFAVAGDEPVVLKGHNGSIMALTFSSVGLISASEDCTVCLWDVV 305

Query: 305 SQRIIQKLDHKKGRITNLVAFPRSSLLISTSNRKRVLKQF-----DKYPQPANLSTSTIP 364
            Q II++ +HKKG +TNLV  PR SLL S SN +RV  QF      K PQPAN S   + 
Sbjct: 306 GQVIIRRFNHKKGAVTNLVVIPR-SLLHSASNHRRVSNQFRISVLSKCPQPANSSNGILT 365

Query: 365 LFPSSRPLGENPNLVGFTSASSLNQQIFDMK 375
           L  +     ++   V     +SL+QQIF+M+
Sbjct: 366 LLHTCSSPKDHQASVDLRRTNSLDQQIFEME 395

[Close]
BLAST of Cp4.1LG09g09590 vs. TrEMBL
Match: A0A0D2QJE6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G119500 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 2.7e-102
Identity = 215/461 (46.64%), Postives = 292/461 (63.34%), Query Frame = 1 

Query: 4   VGETM---ALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTR 63
           +GE M   AL VCSDK+ G GIT+WD +TGE LLHIPTCA+  +GL  LRN+F+VASQ+ 
Sbjct: 3   MGEKMNKEALVVCSDKSTGIGITVWDLETGEQLLHIPTCAAAPHGLFCLRNQFIVASQSN 62

Query: 64  KEGSVGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWE----- 123
           + GS GGGS+F+W L+KPQSPLRSY LE +GP++ TKDG+Y+AGGA SGN +LWE     
Sbjct: 63  RHGSFGGGSIFIWPLNKPQSPLRSYTLEAMGPISCTKDGLYIAGGAPSGNAYLWEVTSGR 122

Query: 124 ----------PIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGTAQPMLYCLIEH 183
                      +K ++FS DDS LI G  DG+I VWSMISL+DVE  G++  +LY   EH
Sbjct: 123 LLRTWHAHHKSLKCMVFSDDDSLLIFGCTDGIISVWSMISLVDVEDSGSSPSLLYYSSEH 182

Query: 184 KSPLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHLEGITEIVLHPTEQFLF 243
           +S +TGL+TMS  + S+ ISSSLDG+ K W+L+SG    T  +   +T I LHP E+ LF
Sbjct: 183 RSSITGLVTMSAGARSIFISSSLDGTCKVWELVSGRHLQTLVYPMSVTAIALHPLERLLF 242

Query: 244 SGTVDGKIFASRLEFG-LDNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCI 303
           SG+VDG IF + L+ G +++C    E Q F    H  +ITAL FS   L+SASED T C+
Sbjct: 243 SGSVDGNIFVNVLDIGAVEDCFITTEDQAFVLKVHNESITALTFSGFHLISASEDFTFCL 302

Query: 304 WDIDSQRIIQKLDHKKGRITNLVAFPRSSLLISTSNRKRVLKQF-----DKYPQPAN--L 363
           WD  ++ ++++ +++KG +TN+V   +SS L   SN +RV  QF      KYPQP+N   
Sbjct: 303 WDTINRVVLRRFNNRKGAVTNMVVIKQSS-LFPISNHQRVTHQFQVSLLQKYPQPSNPGK 362

Query: 364 STSTIPLFPSSRPLGENPNLVGFTSASSLNQQIF-DMKTEGTSAAIQMKVDTRLQSRMWA 423
             +T   FP+S      P    F   + L+  I    + E T A +Q K++  +  R+W 
Sbjct: 363 GMATFLSFPASH---SKPPPTHFLGNNLLDHLISGSEQEEQTPAMLQTKLEKNIDDRLWV 422

Query: 424 SRMTKQVMEMNNHLQSQLLDMMQTRLF---------PKKRK 429
           + MTK VME++ HLQ +LLDMMQ RL          PKK++
Sbjct: 423 TSMTKHVMEISKHLQCRLLDMMQCRLLCNPYEPDSSPKKKR 459

[Close]
BLAST of Cp4.1LG09g09590 vs. TAIR10
Match: AT3G49180.1 (AT3G49180.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 181.8 bits (460), Expect = 9.3e-46
Identity = 139/445 (31.24%), Postives = 220/445 (49.44%), Query Frame = 1 

Query: 8   MALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTRKEGSVGG 67
           M + V +  ++  GI  WD KTG   L    CASP++GL ++  +FL +SQ     +   
Sbjct: 1   MEITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNT--S 60

Query: 68  GSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWE------------ 127
           GS+F WS +KPQ+ ++SYP+EPI  LA+  +G YL GG  SG+I+LWE            
Sbjct: 61  GSIFYWSWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHG 120

Query: 128 ---PIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGTAQPMLY--CLIEHKSPLT 187
               +  ++FS DDS L++GS DG I VWS+I L D +        LY     EH   +T
Sbjct: 121 HYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFD-DFQRQQGNTLYEHNFNEHTMSVT 180

Query: 188 GLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHLEGITEIVLHPTEQFLFSGTVD 247
            ++   G   ++IISSS D + K W L  G +         I  + L P     ++G  D
Sbjct: 181 DIVIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARD 240

Query: 248 GKIFASRLEFGLDNCITIKESQLFASTGHKG-AITALAFSQMD--LVSASEDCTVCIWDI 307
            KI+      G  N  +   +Q+  S   KG AIT LA+      L+S SED  VC+WD 
Sbjct: 241 SKIY-----IGAINATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDP 300

Query: 308 DSQRIIQKLDH----KKGRITNLVAFPRSSLLISTSNRKRVL---------KQFDKYPQP 367
            S R ++ L H    +KG + N+    ++  +++ SN+ +V             +KY +P
Sbjct: 301 KSLRHVRTLIHAKGSRKGPVNNIQIVRKT--IVANSNKTQVSWKSRGALIPPPLEKYERP 360

Query: 368 ANLSTSTIPLFPSSRPLGENPNLVGFTSASSLNQQIFDMKTEGTSAAIQMKVDTRLQSRM 420
              +   I +     P  + P    F SA  +++Q+ +++ +G SAA +M+++ RL+   
Sbjct: 361 VEDTMDGI-VTVDPPPFSDVPVYSSFLSADLIDEQVKELQQQG-SAATEMEME-RLKLEY 420

[Close]
BLAST of Cp4.1LG09g09590 vs. TAIR10
Match: AT4G15900.1 (AT4G15900.1 pleiotropic regulatory locus 1)

HSP 1 Score: 66.2 bits (160), Expect = 5.7e-11
Identity = 52/209 (24.88%), Postives = 93/209 (44.50%), Query Frame = 1 

Query: 117 IKFILFSWDDSFLITGSADGMICVWSMIS-LLDVELVGTAQPMLYCLIEHKSPLTGLITM 176
           ++ + F   + +  TGSAD  I +W + + +L + L G           H   + GL   
Sbjct: 179 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTG-----------HIEQVRGLAVS 238

Query: 177 SGYSMSMIISSSLDGSLKFWDL-MSGMIRGTQGHLEGITEIVLHPTEQFLFSGTVDG--K 236
           + ++   + S+  D  +K WDL  + +IR   GHL G+  + LHPT   L +G  D   +
Sbjct: 239 NRHTY--MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCR 298

Query: 237 IFASRLEFGLDNCITIKESQLFASTGHKGAITALAFSQMD--LVSASEDCTVCIWDIDSQ 296
           ++  R +            Q+FA +GH   + ++     D  +V+ S D T+  WD+   
Sbjct: 299 VWDIRTKM-----------QIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYG 358

Query: 297 RIIQKLDHKKGRITNLVAFPRSSLLISTS 320
           + +  L H K  +  +   P+ +   S S
Sbjct: 359 KTMSTLTHHKKSVRAMTLHPKENAFASAS 363

[Close]
BLAST of Cp4.1LG09g09590 vs. TAIR10
Match: AT3G49660.1 (AT3G49660.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 63.2 bits (152), Expect = 4.8e-10
Identity = 64/258 (24.81%), Postives = 113/258 (43.80%), Query Frame = 1 

Query: 90  IGPLASTKDGVYLAGGAHSGNIHLWEP-----IKFIL----------FSWDDSFLITGSA 149
           I  +A + D  ++   +    + LW+      IK ++          F+   + +++GS 
Sbjct: 74  ISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSF 133

Query: 150 DGMICVWSMISLLDVELVGTAQPMLYCLIEHKSPLTGL-ITMSGYSMSMIISSSLDGSLK 209
           D  + +W +          T    L  L  H  P+T +     G   S+I+SSS DG  +
Sbjct: 134 DETVRIWDV----------TTGKCLKVLPAHSDPVTAVDFNRDG---SLIVSSSYDGLCR 193

Query: 210 FWDLMSGMIRGTQGHLEG--ITEIVLHPTEQFLFSGTVDGKIFASRLEFGLDNCITIKES 269
            WD  +G    T    E   ++ +   P  +F+  GT+D  +        L N  + K  
Sbjct: 194 IWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTL-------RLWNISSAKFL 253

Query: 270 QLFASTGHKGAITAL--AFSQMD---LVSASEDCTVCIWDIDSQRIIQKLDHKKGRITNL 325
           + +  TGH  A   +  AFS  +   +VS SED  V +W+++S++++QKL+     + N+
Sbjct: 254 KTY--TGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNV 309

[Close]
BLAST of Cp4.1LG09g09590 vs. TAIR10
Match: AT4G02730.1 (AT4G02730.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 4.5e-08
Identity = 56/255 (21.96%), Postives = 105/255 (41.18%), Query Frame = 1 

Query: 90  IGPLASTKDGVYLAGGAHSGNIHLWEP----------------IKFILFSWDDSFLITGS 149
           I  LA + D  Y    +    + +W+                 +  + F+   + +++GS
Sbjct: 88  ISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGS 147

Query: 150 ADGMICVWSMISLLDVELVGTAQPMLYCLIEHKSPLTGL-ITMSGYSMSMIISSSLDGSL 209
            D  I +W + +   V ++            H  P++ +     G   S+I+S+S DGS 
Sbjct: 148 FDETIRIWEVKTGKCVRMIKA----------HSMPISSVHFNRDG---SLIVSASHDGSC 207

Query: 210 KFWDLMSGMIRGT--QGHLEGITEIVLHPTEQFLFSGTVDGKIFASRLEFGLDNCITIKE 269
           K WD   G    T        ++     P  +F+   T+D  +        L N  T K 
Sbjct: 208 KIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTL-------KLSNYATGKF 267

Query: 270 SQLFASTGHKGAITAL--AFSQMD---LVSASEDCTVCIWDIDSQRIIQKLDHKKGRITN 321
            +++  TGH   +  +  AFS  +   +VS SED  V +WD+ ++ I+Q+L+     + +
Sbjct: 268 LKVY--TGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVIS 320

[Close]
BLAST of Cp4.1LG09g09590 vs. TAIR10
Match: AT5G21040.1 (AT5G21040.1 F-box protein 2)

HSP 1 Score: 56.2 bits (134), Expect = 5.9e-08
Identity = 38/124 (30.65%), Postives = 56/124 (45.16%), Query Frame = 1 

Query: 179 SMSMIISSSLDGSLKFWDLMSGMIRGTQGHLEGITEIVLHPTEQFLFSGTVDGKIFASRL 238
           S  ++ +S  D  ++ WD+  G+       L G T   L    + L +G  DG I   + 
Sbjct: 173 SAKLVFTSGYDSIVRMWDMEEGLSIAASKPL-GCTIRALAADTKLLVAGGTDGFIHCWKS 232

Query: 239 EFGLDNCITI----KESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIWDIDSQRIIQ 298
             GL N   +    KE   F   GH+G IT+LA     + S S D +V IWD  S + ++
Sbjct: 233 LDGLRNLFDLTGFQKEKTEFRLWGHEGPITSLALDMTSIFSGSWDMSVRIWDRSSMKCVK 292

[Close]
BLAST of Cp4.1LG09g09590 vs. NCBI nr
Match: gi|700209304|gb|KGN64400.1| (hypothetical protein Csa_1G050390 [Cucumis sativus])

HSP 1 Score: 696.8 bits (1797), Expect = 2.4e-197
Identity = 362/474 (76.37%), Postives = 396/474 (83.54%), Query Frame = 1 

Query: 1   MSNVGETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTR 60
           M N GE+MALAVCSD+NMG GITIWD KTG+TLLHIPTCASP YG I LRNEF VASQTR
Sbjct: 1   MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVASQTR 60

Query: 61  KEGSVGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWE----- 120
           KEGSVGGGS+F+WSL+KP  P+ SY LE IGPLASTKDGVYLAGG HSGNIHLWE     
Sbjct: 61  KEGSVGGGSIFIWSLNKPLPPVTSYTLETIGPLASTKDGVYLAGGTHSGNIHLWEVGSGE 120

Query: 121 ----------PIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGTAQPMLYCLIEH 180
                     P+K +LFSWDDSFLITGS+DGMICVWSMISLLDVELVG +QP++YCL+EH
Sbjct: 121 LLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISLLDVELVGNSQPIVYCLMEH 180

Query: 181 KSPLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHLEGITEIVLHPTEQFLF 240
            S LTGL+TMSG SMS+IISSSLDGSLKFWDLMSGMIRGTQ H+EGIT IVLHPTEQ LF
Sbjct: 181 NSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLF 240

Query: 241 SGTVDGKIFASRLEFGLDNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIW 300
           SGTVDG+IFASRLEFG DNCITI+E+Q+ A  GHKGAITALAFSQM L+SASEDCTVCI 
Sbjct: 241 SGTVDGQIFASRLEFGFDNCITIRENQILAPKGHKGAITALAFSQMYLISASEDCTVCIR 300

Query: 301 DIDSQRIIQKLDHKKGRITNLVAFPRSSLLISTSNRKRVLKQ-----FDKYPQPANLSTS 360
           DI SQRIIQKLDHKKGRITNLVA PRSSL ISTSNRKRV  Q      DKYPQPANL  S
Sbjct: 301 DISSQRIIQKLDHKKGRITNLVAIPRSSL-ISTSNRKRVSNQSSMSSLDKYPQPANLMKS 360

Query: 361 TIPLFPSSRPLGENPNLVGFTSASSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMT 420
           TIPLF S +PLGEN N + FTS SSLNQQI DMKTEGTSAAIQMKV+T L+ RMWASRMT
Sbjct: 361 TIPLFSSIQPLGENLNSIRFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMT 420

Query: 421 KQVMEMNNHLQSQLLDMMQTRLF--------PKKRKDQRDRVARTREKHPLSFN 447
           K+VM+MNNHLQS+LLDMM+ RLF         KK+KD+RDRVA+ REK  LSF+
Sbjct: 421 KEVMDMNNHLQSRLLDMMRIRLFEPAKISSSSKKQKDERDRVAKKREKRTLSFH 473

[Close]
BLAST of Cp4.1LG09g09590 vs. NCBI nr
Match: gi|743831497|ref|XP_011024048.1| (PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Populus euphratica])

HSP 1 Score: 440.3 bits (1131), Expect = 4.1e-120
Identity = 232/446 (52.02%), Postives = 301/446 (67.49%), Query Frame = 1 

Query: 5   GETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTRKEGS 64
           G    L VCSD+NMG+GI +WD +TG+ ++HIPTCASP +GL+ LR++FLVASQ  K GS
Sbjct: 6   GSDEVLVVCSDRNMGTGIAMWDMETGDRIMHIPTCASPLHGLLCLRDQFLVASQVNKHGS 65

Query: 65  VGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWEP-------- 124
           VGGG++F WSL+KPQ PLRSYPLE IGPL  TKDG++LAGG+ SGN++LWE         
Sbjct: 66  VGGGAIFTWSLNKPQQPLRSYPLEAIGPLGCTKDGLFLAGGSPSGNVYLWEVAGGRLLKT 125

Query: 125 -------IKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGTAQPMLYCLIEHKSPL 184
                  +K ++FS DDS LI+GS DG++CVWSM+SLLD E  G++  +L+   EH S +
Sbjct: 126 WRAHSRCLKCLIFSNDDSLLISGSEDGVVCVWSMVSLLDTEDFGSSCSLLHYSSEHTSSV 185

Query: 185 TGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHLEGITEIVLHPTEQFLFSGTV 244
           TGL+T SG + S  ISSSLD + K WD+ SG +  TQ +  GIT IV  P EQ LF+G++
Sbjct: 186 TGLLTTSGIANSTFISSSLDATCKAWDVFSGRLIQTQDYPLGITAIVTDPAEQLLFAGSM 245

Query: 245 DGKIFASRLEFG-LDNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIWDID 304
           DG+IF S L+ G L++ + +   +     GH G+I AL FS + L+SASEDCTVC+WD+ 
Sbjct: 246 DGRIFVSVLDIGRLEDPLAVAGDEPVVLKGHNGSIMALTFSSVGLISASEDCTVCLWDVV 305

Query: 305 SQRIIQKLDHKKGRITNLVAFPRSSLLISTSNRKRVLKQF-----DKYPQPANLSTSTIP 364
           SQ II+  +H+KG +TNLV  PR SLL S SN +RV  QF      K PQPAN S   + 
Sbjct: 306 SQVIIRSFNHQKGAVTNLVVIPR-SLLHSASNHRRVSNQFRVSVLSKCPQPANSSNGILT 365

Query: 365 LFPSSRPLGENPNLVGFTSASSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMTKQV 424
           L  +     ++   V     +SLNQQIF+M+ E T AA+QMKV+T +  R WA RMT  V
Sbjct: 366 LLHTCSSPKDHQASVDLRRTNSLNQQIFEMEQEQTPAAMQMKVETSIDHRTWARRMTNHV 425

Query: 425 MEMNNHLQSQLLDMMQTRLFPKKRKD 430
           MEMN HLQS+LLD+MQTRL      D
Sbjct: 426 MEMNRHLQSRLLDLMQTRLLLATEND 450

[Close]
BLAST of Cp4.1LG09g09590 vs. NCBI nr
Match: gi|645268266|ref|XP_008239447.1| (PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Prunus mume])

HSP 1 Score: 439.1 bits (1128), Expect = 9.1e-120
Identity = 238/441 (53.97%), Postives = 298/441 (67.57%), Query Frame = 1 

Query: 3   NVGETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTRKE 62
           N GE  A+ VCSDK+MG GITIW    G+ LLHIPTCAS  +GL+ LRN+FLVASQ  K 
Sbjct: 4   NGGE--AVVVCSDKSMGIGITIWGIDKGDRLLHIPTCASAPHGLVCLRNQFLVASQIHKH 63

Query: 63  GSVGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWE------- 122
           GSVGGG++ +W L+KPQ P+RSYPLE IGPL+ TKDGVYLAGGA SGN++LWE       
Sbjct: 64  GSVGGGAISMWPLNKPQQPIRSYPLEAIGPLSCTKDGVYLAGGALSGNVYLWEVANGKLL 123

Query: 123 --------PIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGTAQPMLYCLIEHKS 182
                    +  +LFS D S L++ S DGMICVWSM+ LLD+E   +   +L+  +EHKS
Sbjct: 124 KTWRGHHKSLNCMLFSDDGSLLVSASDDGMICVWSMVGLLDMEDSQSFPSLLHYSMEHKS 183

Query: 183 PLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHLEGITEIVLHPTEQFLFSG 242
            +TGL+T SG S  ++ISSSLDGS K WDL+ G +  TQ +   IT +VLHPTEQ  FSG
Sbjct: 184 SITGLLTTSGSSNVVLISSSLDGSCKVWDLVLGKLMQTQVYPLAITAVVLHPTEQLFFSG 243

Query: 243 TVDGKIFASRLEFGL-DNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIWD 302
           ++DG+IF ++LE GL +N +   E Q     GHKGA+TAL FSQ  LVSASEDCT+CIWD
Sbjct: 244 SIDGRIFVNKLEIGLVENSLAAAEDQKAVIKGHKGAVTALTFSQAGLVSASEDCTICIWD 303

Query: 303 IDSQRIIQKLDHKKGRITNLVAFPRSSLLISTSNRKRVLKQF-----DKYPQPANLSTST 362
           I +  I+++ DH KG +TNL   P+SSLL S SN +RV   F     DKYPQP N S   
Sbjct: 304 ITNWAILRRFDHNKGAVTNLAVIPQSSLL-SVSNHRRVSNAFGVSSLDKYPQPPNSSKEK 363

Query: 363 IPLFPSSRPLGENPNLVGFTSASSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMTK 422
           IPL  S   L  N         +   QQI+D + E + AA+QMK++T L+ RMWA+RM K
Sbjct: 364 IPLLSSCHFLKGN-------HTTHSGQQIYDTEEEFSPAAMQMKLETILEHRMWATRMAK 423

[Close]
BLAST of Cp4.1LG09g09590 vs. NCBI nr
Match: gi|778658063|ref|XP_011652038.1| (PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Cucumis sativus])

HSP 1 Score: 436.8 bits (1122), Expect = 4.5e-119
Identity = 212/275 (77.09%), Postives = 234/275 (85.09%), Query Frame = 1 

Query: 1   MSNVGETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTR 60
           M N GE+MALAVCSD+NMG GITIWD KTG+TLLHIPTCASP YG I LRNEF VASQTR
Sbjct: 1   MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPTCASPPYGFICLRNEFFVASQTR 60

Query: 61  KEGSVGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLW------ 120
           KEGSVGGGS+F+WSL+KP  P+ SY LE IGPLASTKDGVYLAGG HSGNIHLW      
Sbjct: 61  KEGSVGGGSIFIWSLNKPLPPVTSYTLETIGPLASTKDGVYLAGGTHSGNIHLWEVGSGE 120

Query: 121 ---------EPIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGTAQPMLYCLIEH 180
                    +P+K +LFSWDDSFLITGS+DGMICVWSMISLLDVELVG +QP++YCL+EH
Sbjct: 121 LLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISLLDVELVGNSQPIVYCLMEH 180

Query: 181 KSPLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHLEGITEIVLHPTEQFLF 240
            S LTGL+TMSG SMS+IISSSLDGSLKFWDLMSGMIRGTQ H+EGIT IVLHPTEQ LF
Sbjct: 181 NSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIRGTQAHIEGITAIVLHPTEQVLF 240

Query: 241 SGTVDGKIFASRLEFGLDNCITIKESQLFASTGHK 261
           SGTVDG+IFASRLEFG DNCITI+E+Q+ A  GHK
Sbjct: 241 SGTVDGQIFASRLEFGFDNCITIRENQILAPKGHK 275

[Close]
BLAST of Cp4.1LG09g09590 vs. NCBI nr
Match: gi|694439228|ref|XP_009346514.1| (PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Pyrus x bretschneideri])

HSP 1 Score: 436.8 bits (1122), Expect = 4.5e-119
Identity = 232/442 (52.49%), Postives = 309/442 (69.91%), Query Frame = 1 

Query: 9   ALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTRKEGSVGGG 68
           A+AVCSDK MG+GITIW+  TG+ LLHIPTCASP+ GL+ LRN+FLVA+Q  K GSVGGG
Sbjct: 8   AVAVCSDKRMGTGITIWNIDTGDRLLHIPTCASPARGLVCLRNQFLVAAQIHKPGSVGGG 67

Query: 69  SMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWE------------- 128
           ++ +W L+KPQ P++SYPLEPIGPL+ TKDG+YLAGGA SGN +LWE             
Sbjct: 68  AISMWKLNKPQKPIQSYPLEPIGPLSCTKDGLYLAGGALSGNTYLWEVANGKLLKTWHGH 127

Query: 129 --PIKFILFSWDDSFLITGSADGMICVWSMISLLDVELVGTAQPMLYCLIEHKSPLTGLI 188
              +  +LFS D S L++GS DGMICVW++ISLLDVE V +    L+  +EHKS +TGL+
Sbjct: 128 DKSLSCMLFSDDGSLLVSGSDDGMICVWNLISLLDVENVESCPSPLHYSMEHKSSITGLL 187

Query: 189 TMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQGHLEGITEIVLHPTEQFLFSGTVDGKI 248
           T SG S  ++ISSSLDGS K WDL+ G +  TQ +  GIT + LHPT+Q +FSG++DG I
Sbjct: 188 TTSGISSPVLISSSLDGSYKVWDLVLGNLMHTQVYPLGITAVALHPTKQLIFSGSIDGSI 247

Query: 249 FASRLEFGL-DNCITIKESQLFASTGHKGAITALAFSQMDLVSASEDCTVCIWDIDSQRI 308
           F ++LE GL ++ +   E        H G++TAL FS+  L+SA+EDCT+CIWDI S  I
Sbjct: 248 FVNKLEIGLVEDYLVGAEDHSPVLKEHNGSVTALTFSKSGLISAAEDCTICIWDITSCEI 307

Query: 309 IQKLDHKKGRITNLVAFPRSSLLISTSNRKRV-----LKQFDKYPQPANLSTSTIPLFPS 368
           I++ +H+KG +TNL   P+SSLL   SNR+++     +   DKYPQP N S   I LFPS
Sbjct: 308 IRRFNHQKGPVTNLAVIPQSSLL-PVSNRRKLSNALGVSILDKYPQPVNSSEEKITLFPS 367

Query: 369 SRPLGENPNLVGFTSASSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMTKQVMEMN 428
            +P       V F ++ S  QQI+DMK +GT AA++MK++T L+ R+ A++M K VMEMN
Sbjct: 368 CQP------SVNFQTSGSC-QQIYDMKKKGTVAAMEMKLETCLEDRIRATKMAKHVMEMN 427

Query: 429 NHLQSQLLDMMQTRLFPKKRKD 430
            HLQS+LLD+M++RL   K  +
Sbjct: 428 RHLQSRLLDLMESRLSRPKSSE 441

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g09590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RID3_ARATH1.6e-4431.24Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana GN=RID3 PE=1 SV=1[more]
WDR18_DANRE6.7e-2226.16WD repeat-containing protein 18 OS=Danio rerio GN=wdr18 PE=2 SV=1[more]
WDR18_BOVIN9.7e-2126.22WD repeat-containing protein 18 OS=Bos taurus GN=WDR18 PE=2 SV=1[more]
WDR18_HUMAN7.0e-1926.44WD repeat-containing protein 18 OS=Homo sapiens GN=WDR18 PE=1 SV=2[more]
KTNB1_DANRE2.2e-1226.43Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio GN=katnb1 PE=2 SV=1[more]
BLAST of Cp4.1LG09g09590 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LR59_CUCSA1.7e-19776.37Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050390 PE=4 SV=1[more]
B9RAI4_RICCO1.5e-11350.44WD-repeat protein, putative OS=Ricinus communis GN=RCOM_1506640 PE=4 SV=1[more]
A5C3S0_VITVI2.3e-10947.85Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026009 PE=4 SV=1[more]
B9IF84_POPTR7.1e-10350.64Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s10540g PE=4 SV=1[more]
A0A0D2QJE6_GOSRA2.7e-10246.64Uncharacterized protein OS=Gossypium raimondii GN=B456_003G119500 PE=4 SV=1[more]
BLAST of Cp4.1LG09g09590 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G49180.19.3e-4631.24 Transducin/WD40 repeat-like superfamily protein[more]
AT4G15900.15.7e-1124.88 pleiotropic regulatory locus 1[more]
AT3G49660.14.8e-1024.81 Transducin/WD40 repeat-like superfamily protein[more]
AT4G02730.14.5e-0821.96 Transducin/WD40 repeat-like superfamily protein[more]
AT5G21040.15.9e-0830.65 F-box protein 2[more]
BLAST of Cp4.1LG09g09590 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209304|gb|KGN64400.1|2.4e-19776.37hypothetical protein Csa_1G050390 [Cucumis sativus][more]
gi|743831497|ref|XP_011024048.1|4.1e-12052.02PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Populus euphratica][more]
gi|645268266|ref|XP_008239447.1|9.1e-12053.97PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Prunus mume][more]
gi|778658063|ref|XP_011652038.1|4.5e-11977.09PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Cucumis sativus][more]
gi|694439228|ref|XP_009346514.1|4.5e-11952.49PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g09590.1Cp4.1LG09g09590.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatPFAMPF00400WD40coord: 121..142
score: 0.22coord: 257..286
score: 8.
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 198..237
score: 30.0coord: 155..196
score: 0.71coord: 107..142
score: 0.16coord: 249..286
score: 8.2E-6coord: 289..329
score:
IPR001680WD40 repeatPROFILEPS50082WD_REPEATS_2coord: 256..295
score: 12.28coord: 181..205
score:
IPR015943WD40/YVTN repeat-like-containing domainGENE3DG3DSA:2.130.10.10coord: 10..130
score: 1.6E-10coord: 131..324
score: 1.8
IPR017986WD40-repeat-containing domainPROFILEPS50294WD_REPEATS_REGIONcoord: 110..295
score: 13
IPR017986WD40-repeat-containing domainunknownSSF50978WD40 repeat-likecoord: 88..323
score: 4.48E-36coord: 10..116
score: 3.
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 183..197
score: -coord: 273..287
scor
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 183..197
score: 2.7E-6coord: 129..143
score: 2.7E-6coord: 273..287
score: 2.
NoneNo IPR availablePANTHERPTHR18763WD-REPEAT PROTEIN 18coord: 1..418
score: 4.0E
NoneNo IPR availablePANTHERPTHR18763:SF2SUBFAMILY NOT NAMEDcoord: 1..418
score: 4.0E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG09g09590Cucsa.392000Cucumber (Gy14) v1cgycpeB1034
Cp4.1LG09g09590CmaCh18G003250Cucurbita maxima (Rimu)cmacpeB414
Cp4.1LG09g09590CmoCh18G002090Cucurbita moschata (Rifu)cmocpeB377
Cp4.1LG09g09590Cla002610Watermelon (97103) v1cpewmB025
Cp4.1LG09g09590Csa1G050390Cucumber (Chinese Long) v2cpecuB029
Cp4.1LG09g09590ClCG03G003660Watermelon (Charleston Gray)cpewcgB036
Cp4.1LG09g09590CSPI01G09440Wild cucumber (PI 183967)cpecpiB025
Cp4.1LG09g09590Lsi02G004930Bottle gourd (USVL1VR-Ls)cpelsiB026
Cp4.1LG09g09590CsaV3_1G009550Cucumber (Chinese Long) v3cpecucB0031
Cp4.1LG09g09590CsGy1G009490Cucumber (Gy14) v2cgybcpeB018
Cp4.1LG09g09590Carg06790Silver-seed gourdcarcpeB0694
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g09590Wax gourdcpewgoB0048
Cp4.1LG09g09590Cucurbita pepo (Zucchini)cpecpeB029
Cp4.1LG09g09590Cucurbita pepo (Zucchini)cpecpeB045
Cp4.1LG09g09590Cucumber (Gy14) v1cgycpeB0419
Cp4.1LG09g09590Cucurbita maxima (Rimu)cmacpeB214
Cp4.1LG09g09590Cucurbita moschata (Rifu)cmocpeB045
Cp4.1LG09g09590Cucurbita moschata (Rifu)cmocpeB184
Cp4.1LG09g09590Watermelon (Charleston Gray)cpewcgB051
Cp4.1LG09g09590Watermelon (97103) v1cpewmB061
Cp4.1LG09g09590Melon (DHL92) v3.5.1cpemeB026
Cp4.1LG09g09590Cucumber (Gy14) v2cgybcpeB015
Cp4.1LG09g09590Melon (DHL92) v3.6.1cpemedB031
Cp4.1LG09g09590Melon (DHL92) v3.6.1cpemedB041
Cp4.1LG09g09590Silver-seed gourdcarcpeB0507
Cp4.1LG09g09590Silver-seed gourdcarcpeB1396
Cp4.1LG09g09590Cucumber (Chinese Long) v3cpecucB0029