CsGy1G003070 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G003070
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 1920393 .. 1920863 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAAACAAGAAACAAAAACATAAAGGCGAAGAAGAGGGACCGAGCTCGAACGATAGCAAAACGATTTAGAGTCGAGAACTTTACAAGGCAAAAACTTGTTCTGACAGAGAAGCTTGAAGAGACCTCAAAGGAAAGAATGGAGGTAAGAGCTTTGCATGAAATCAAGTTTGGGATATCATTCACAATTCCTGATAGAATGGCTACAGAAATTAGTGATAAGAAAAGGATAAGTGGATTACACCCGTTGAGGATCACAAGAGTTCCATATGGAGGGCCAATGGAGTTTCATGAGATTGTAAAAGAGGCTGAGAAAGGTTCAGCTCCATTGAAGAATCAGCAAAAAGGGAAGCCACCAAATCCTAAAGCAGCATATCATAGGAGCTGCTTGAATGAATGGCATCCTCAAGTGTTTCATTTCATCTCTAATTCTTATTGTCCTGACAAGTTTGGGGGATTTATAGATTGA

mRNA sequence

ATGGCCAAAACAAGAAACAAAAACATAAAGGCGAAGAAGAGGGACCGAGCTCGAACGATAGCAAAACGATTTAGAGTCGAGAACTTTACAAGGCAAAAACTTGTTCTGACAGAGAAGCTTGAAGAGACCTCAAAGGAAAGAATGGAGGTAAGAGCTTTGCATGAAATCAAGTTTGGGATATCATTCACAATTCCTGATAGAATGGCTACAGAAATTAGTGATAAGAAAAGGATAAGTGGATTACACCCGTTGAGGATCACAAGAGTTCCATATGGAGGGCCAATGGAGTTTCATGAGATTGTAAAAGAGGCTGAGAAAGGTTCAGCTCCATTGAAGAATCAGCAAAAAGGGAAGCCACCAAATCCTAAAGCAGCATATCATAGGAGCTGCTTGAATGAATGGCATCCTCAAGTGTTTCATTTCATCTCTAATTCTTATTGTCCTGACAAGTTTGGGGGATTTATAGATTGA

Coding sequence (CDS)

ATGGCCAAAACAAGAAACAAAAACATAAAGGCGAAGAAGAGGGACCGAGCTCGAACGATAGCAAAACGATTTAGAGTCGAGAACTTTACAAGGCAAAAACTTGTTCTGACAGAGAAGCTTGAAGAGACCTCAAAGGAAAGAATGGAGGTAAGAGCTTTGCATGAAATCAAGTTTGGGATATCATTCACAATTCCTGATAGAATGGCTACAGAAATTAGTGATAAGAAAAGGATAAGTGGATTACACCCGTTGAGGATCACAAGAGTTCCATATGGAGGGCCAATGGAGTTTCATGAGATTGTAAAAGAGGCTGAGAAAGGTTCAGCTCCATTGAAGAATCAGCAAAAAGGGAAGCCACCAAATCCTAAAGCAGCATATCATAGGAGCTGCTTGAATGAATGGCATCCTCAAGTGTTTCATTTCATCTCTAATTCTTATTGTCCTGACAAGTTTGGGGGATTTATAGATTGA

Protein sequence

MAKTRNKNIKAKKRDRARTIAKRFRVENFTRQKLVLTEKLEETSKERMEVRALHEIKFGISFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQKGKPPNPKAAYHRSCLNEWHPQVFHFISNSYCPDKFGGFID
Homology
[Close]
BLAST of CsGy1G003070 vs. NCBI nr
Match: KGN63749.1 (hypothetical protein Csa_1G014460 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 2.3e-82
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 

Query: 1   MAKTRNKNIKAKKRDRARTIAKRFRVENFTRQKLVLTEKLEETSKERMEVRALHEIKFGI 60
           MAKTRNKNIKAKKRDRARTIAKRFRVENFTRQKLVLTEKLEETSKERMEVRALHEIKFGI
Sbjct: 1   MAKTRNKNIKAKKRDRARTIAKRFRVENFTRQKLVLTEKLEETSKERMEVRALHEIKFGI 60

Query: 61  SFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQKGKPP 120
           SFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQKGKPP
Sbjct: 61  SFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQKGKPP 120

Query: 121 NPKAAYHRSCLNEWHPQVFHFISNSYCPDKFGGFID 157
           NPKAAYHRSCLNEWHPQVFHFISNSYCPDKFGGFID
Sbjct: 121 NPKAAYHRSCLNEWHPQVFHFISNSYCPDKFGGFID 156

[Close]
BLAST of CsGy1G003070 vs. NCBI nr
Match: PON92695.1 (hypothetical protein TorRG33x02_115550 [Trema orientalis])

HSP 1 Score: 119.4 bits (298), Expect = 1.1e-23
Identity = 55/87 (63.22%), Postives = 66/87 (75.86%), Query Frame = 0 

Query: 57  KFGISFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQK 116
           KFGISF +PDR+A EISDKK I G HP+RITR+P GGP EFH +V+EAEK S PLK   +
Sbjct: 12  KFGISFIVPDRLAVEISDKKTIVGKHPMRITRIPLGGPTEFHRVVEEAEKESRPLKKYHE 71

Query: 117 ---GKPPNPKAAYHRSCLNEWHPQVFH 141
                 PNPK AYHRS +N+WHP+VF+
Sbjct: 72  NVMATGPNPKKAYHRSHMNDWHPKVFY 98

[Close]
BLAST of CsGy1G003070 vs. NCBI nr
Match: PON36990.1 (hypothetical protein PanWU01x14_323790 [Parasponia andersonii])

HSP 1 Score: 118.6 bits (296), Expect = 1.9e-23
Identity = 55/87 (63.22%), Postives = 66/87 (75.86%), Query Frame = 0 

Query: 57  KFGISFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQK 116
           KFGISF +PDR+A EISDKK I G HP+RITR+P GGP EFH +V+EAEK S PLK   +
Sbjct: 12  KFGISFIVPDRLAVEISDKKTIVGNHPMRITRIPSGGPTEFHRVVEEAEKESRPLKKYNE 71

Query: 117 ---GKPPNPKAAYHRSCLNEWHPQVFH 141
                 PNPK AYHRS +N+WHP+VF+
Sbjct: 72  NVMATRPNPKKAYHRSHMNDWHPKVFY 98

[Close]
BLAST of CsGy1G003070 vs. NCBI nr
Match: EXB76380.1 (hypothetical protein L484_005314 [Morus notabilis])

HSP 1 Score: 113.2 bits (282), Expect = 7.8e-22
Identity = 53/86 (61.63%), Postives = 63/86 (73.26%), Query Frame = 0 

Query: 57  KFGISFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQK 116
           KFGISF +PDR+  EI+DKK++ G HP+RITRVP GGP  FH IV+EA K S PLK    
Sbjct: 12  KFGISFIVPDRLVVEITDKKKVWGKHPMRITRVPSGGPAGFHNIVEEARKESQPLKKHCD 71

Query: 117 --GKPPNPKAAYHRSCLNEWHPQVFH 141
                PNPK AYHRS +N+WHPQVF+
Sbjct: 72  IVATRPNPKKAYHRSHMNDWHPQVFY 97

[Close]
BLAST of CsGy1G003070 vs. NCBI nr
Match: AES75131.1 (hypothetical protein MTR_6g026830 [Medicago truncatula])

HSP 1 Score: 102.1 bits (253), Expect = 1.8e-18
Identity = 52/92 (56.52%), Postives = 66/92 (71.74%), Query Frame = 0 

Query: 57  KFGISFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPL----- 116
           KFGI+FTIPDR+ +EI+DKKRI G +PLRITR+P GGP EFH +V+EAEKGS+ +     
Sbjct: 14  KFGITFTIPDRITSEINDKKRIIGKNPLRITRIPSGGPREFHNLVQEAEKGSSTILTLKK 73

Query: 117 KNQQKGKPPNPKAAYHRSCLNEWHPQVFHFIS 144
           KN    K  + K AYHR+  N+W   VF+F S
Sbjct: 74  KNGVGNKLFSHKRAYHRNRFNDWCVDVFYFES 105

[Close]
BLAST of CsGy1G003070 vs. TrEMBL
Match: tr|A0A0A0LRV9|A0A0A0LRV9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014460 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.5e-82
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 

Query: 1   MAKTRNKNIKAKKRDRARTIAKRFRVENFTRQKLVLTEKLEETSKERMEVRALHEIKFGI 60
           MAKTRNKNIKAKKRDRARTIAKRFRVENFTRQKLVLTEKLEETSKERMEVRALHEIKFGI
Sbjct: 1   MAKTRNKNIKAKKRDRARTIAKRFRVENFTRQKLVLTEKLEETSKERMEVRALHEIKFGI 60

Query: 61  SFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQKGKPP 120
           SFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQKGKPP
Sbjct: 61  SFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQKGKPP 120

Query: 121 NPKAAYHRSCLNEWHPQVFHFISNSYCPDKFGGFID 157
           NPKAAYHRSCLNEWHPQVFHFISNSYCPDKFGGFID
Sbjct: 121 NPKAAYHRSCLNEWHPQVFHFISNSYCPDKFGGFID 156

[Close]
BLAST of CsGy1G003070 vs. TrEMBL
Match: tr|A0A2P5F4J0|A0A2P5F4J0_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_115550 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.2e-24
Identity = 55/87 (63.22%), Postives = 66/87 (75.86%), Query Frame = 0 

Query: 57  KFGISFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQK 116
           KFGISF +PDR+A EISDKK I G HP+RITR+P GGP EFH +V+EAEK S PLK   +
Sbjct: 12  KFGISFIVPDRLAVEISDKKTIVGKHPMRITRIPLGGPTEFHRVVEEAEKESRPLKKYHE 71

Query: 117 ---GKPPNPKAAYHRSCLNEWHPQVFH 141
                 PNPK AYHRS +N+WHP+VF+
Sbjct: 72  NVMATGPNPKKAYHRSHMNDWHPKVFY 98

[Close]
BLAST of CsGy1G003070 vs. TrEMBL
Match: tr|A0A2P5AKC8|A0A2P5AKC8_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_323790 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.2e-23
Identity = 55/87 (63.22%), Postives = 66/87 (75.86%), Query Frame = 0 

Query: 57  KFGISFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQK 116
           KFGISF +PDR+A EISDKK I G HP+RITR+P GGP EFH +V+EAEK S PLK   +
Sbjct: 12  KFGISFIVPDRLAVEISDKKTIVGNHPMRITRIPSGGPTEFHRVVEEAEKESRPLKKYNE 71

Query: 117 ---GKPPNPKAAYHRSCLNEWHPQVFH 141
                 PNPK AYHRS +N+WHP+VF+
Sbjct: 72  NVMATRPNPKKAYHRSHMNDWHPKVFY 98

[Close]
BLAST of CsGy1G003070 vs. TrEMBL
Match: tr|W9RJI5|W9RJI5_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_005314 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.2e-22
Identity = 53/86 (61.63%), Postives = 63/86 (73.26%), Query Frame = 0 

Query: 57  KFGISFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQK 116
           KFGISF +PDR+  EI+DKK++ G HP+RITRVP GGP  FH IV+EA K S PLK    
Sbjct: 12  KFGISFIVPDRLVVEITDKKKVWGKHPMRITRVPSGGPAGFHNIVEEARKESQPLKKHCD 71

Query: 117 --GKPPNPKAAYHRSCLNEWHPQVFH 141
                PNPK AYHRS +N+WHPQVF+
Sbjct: 72  IVATRPNPKKAYHRSHMNDWHPQVFY 97

[Close]
BLAST of CsGy1G003070 vs. TrEMBL
Match: tr|G7KP67|G7KP67_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11417169 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.2e-18
Identity = 52/92 (56.52%), Postives = 66/92 (71.74%), Query Frame = 0 

Query: 57  KFGISFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPL----- 116
           KFGI+FTIPDR+ +EI+DKKRI G +PLRITR+P GGP EFH +V+EAEKGS+ +     
Sbjct: 14  KFGITFTIPDRITSEINDKKRIIGKNPLRITRIPSGGPREFHNLVQEAEKGSSTILTLKK 73

Query: 117 KNQQKGKPPNPKAAYHRSCLNEWHPQVFHFIS 144
           KN    K  + K AYHR+  N+W   VF+F S
Sbjct: 74  KNGVGNKLFSHKRAYHRNRFNDWCVDVFYFES 105

The following BLAST results are available for this feature:
BLAST of CsGy1G003070 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63749.12.3e-82100.00hypothetical protein Csa_1G014460 [Cucumis sativus][more]
PON92695.11.1e-2363.22hypothetical protein TorRG33x02_115550 [Trema orientalis][more]
PON36990.11.9e-2363.22hypothetical protein PanWU01x14_323790 [Parasponia andersonii][more]
EXB76380.17.8e-2261.63hypothetical protein L484_005314 [Morus notabilis][more]
AES75131.11.8e-1856.52hypothetical protein MTR_6g026830 [Medicago truncatula][more]
BLAST of CsGy1G003070 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G003070 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G003070 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LRV9|A0A0A0LRV9_CUCSA1.5e-82100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014460 PE=4 SV=1[more]
tr|A0A2P5F4J0|A0A2P5F4J0_9ROSA7.2e-2463.22Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_115550 PE=4 S... [more]
tr|A0A2P5AKC8|A0A2P5AKC8_PARAD1.2e-2363.22Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_323790 PE... [more]
tr|W9RJI5|W9RJI5_9ROSA5.2e-2261.63Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_005314 PE=4 SV=1[more]
tr|G7KP67|G7KP67_MEDTR1.2e-1856.52Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11417169 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G003070.1CsGy1G003070.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 26..46

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G003070Cla019018Watermelon (97103) v1cgybwmB082
CsGy1G003070Csa1G014460Cucumber (Chinese Long) v2cgybcuB001
CsGy1G003070ClCG06G015250Watermelon (Charleston Gray)cgybwcgB066
CsGy1G003070CSPI01G03080Wild cucumber (PI 183967)cgybcpiB001
CsGy1G003070CmaCh10G002680Cucurbita maxima (Rimu)cgybcmaB024
CsGy1G003070CmoCh10G002850Cucurbita moschata (Rifu)cgybcmoB008
CsGy1G003070Cp4.1LG18g07320Cucurbita pepo (Zucchini)cgybcpeB056
CsGy1G003070CsaV3_1G003140Cucumber (Chinese Long) v3cgybcucB002
CsGy1G003070Cla97C06G124770Watermelon (97103) v2cgybwmbB066
CsGy1G003070Bhi02G000027Wax gourdcgybwgoB078
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G003070Bottle gourd (USVL1VR-Ls)cgyblsiB021
CsGy1G003070Bottle gourd (USVL1VR-Ls)cgyblsiB036
CsGy1G003070Bottle gourd (USVL1VR-Ls)cgyblsiB058
CsGy1G003070Melon (DHL92) v3.5.1cgybmeB019
CsGy1G003070Melon (DHL92) v3.5.1cgybmeB042
CsGy1G003070Melon (DHL92) v3.6.1cgybmedB018
CsGy1G003070Melon (DHL92) v3.6.1cgybmedB036
CsGy1G003070Watermelon (Charleston Gray)cgybwcgB052
CsGy1G003070Watermelon (Charleston Gray)cgybwcgB054
CsGy1G003070Watermelon (97103) v1cgybwmB063
CsGy1G003070Watermelon (97103) v1cgybwmB065
CsGy1G003070Wild cucumber (PI 183967)cgybcpiB003
CsGy1G003070Wild cucumber (PI 183967)cgybcpiB011
CsGy1G003070Silver-seed gourdcarcgybB0394
CsGy1G003070Silver-seed gourdcarcgybB0471
CsGy1G003070Silver-seed gourdcarcgybB0468
CsGy1G003070Silver-seed gourdcarcgybB0519
CsGy1G003070Silver-seed gourdcarcgybB0592
CsGy1G003070Silver-seed gourdcarcgybB0594
CsGy1G003070Cucumber (Chinese Long) v3cgybcucB004
CsGy1G003070Cucumber (Chinese Long) v3cgybcucB012
CsGy1G003070Watermelon (97103) v2cgybwmbB052
CsGy1G003070Watermelon (97103) v2cgybwmbB054
CsGy1G003070Wax gourdcgybwgoB040
CsGy1G003070Cucumber (Gy14) v2cgybcgybB002
CsGy1G003070Cucumber (Gy14) v2cgybcgybB007
CsGy1G003070Cucurbita maxima (Rimu)cgybcmaB007
CsGy1G003070Cucurbita maxima (Rimu)cgybcmaB029
CsGy1G003070Cucurbita maxima (Rimu)cgybcmaB043
CsGy1G003070Cucurbita maxima (Rimu)cgybcmaB077
CsGy1G003070Cucurbita maxima (Rimu)cgybcmaB088
CsGy1G003070Cucurbita moschata (Rifu)cgybcmoB028
CsGy1G003070Cucurbita moschata (Rifu)cgybcmoB040
CsGy1G003070Cucurbita moschata (Rifu)cgybcmoB066
CsGy1G003070Cucurbita moschata (Rifu)cgybcmoB088
CsGy1G003070Cucurbita pepo (Zucchini)cgybcpeB020
CsGy1G003070Cucurbita pepo (Zucchini)cgybcpeB041
CsGy1G003070Cucurbita pepo (Zucchini)cgybcpeB073
CsGy1G003070Cucurbita pepo (Zucchini)cgybcpeB111
CsGy1G003070Cucumber (Chinese Long) v2cgybcuB004
CsGy1G003070Cucumber (Chinese Long) v2cgybcuB013