Cp4.1LG20g02580 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG20g02580
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLOB domain protein
LocationCp4.1LG20 : 1458285 .. 1458758 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATCATTAGCAACAGGAACAAACAATTACTACAGCCCTTGTGCAGCCTGCAAATTCCTAAGAAGAAAATGCATAGCAGGATGCATATTTGCACCCTATTTCCCACCAGAGGAGCCCCAAAAATTCGCCAATGTCCACAAGGTGTTCGGAGCCAGTAACGTGGCGAAGCTCCTCAATGAAGTTCTTCCTCATCAACGACAAGACGCCGTCGTGTCCCTCGCCTACCAAGCAGAGGCCAGAATCAGAGACCCTGTTTATGGCTGTGTTGCCGCCATTTCCTTCCTTCAAAAACAGGTCCAAAGGCTCCAAAATGAACTCGATGCAGCTAAAGCTCGCCTTTTGCTATACTCTTGCACTGATTTCTCAACACCCTTTTCGCCTCAGCCTCAGATTATTAGCCCTCCACTGCTTTGGAATCATAATGATATTGTTTCTGCTAATTCTTCTGTGTATTTTAATGGAGGAATTTAA

mRNA sequence

ATGGGATCATTAGCAACAGGAACAAACAATTACTACAGCCCTTGTGCAGCCTGCAAATTCCTAAGAAGAAAATGCATAGCAGGATGCATATTTGCACCCTATTTCCCACCAGAGGAGCCCCAAAAATTCGCCAATGTCCACAAGGTGTTCGGAGCCAGTAACGTGGCGAAGCTCCTCAATGAAGTTCTTCCTCATCAACGACAAGACGCCGTCGTGTCCCTCGCCTACCAAGCAGAGGCCAGAATCAGAGACCCTGTTTATGGCTGTGTTGCCGCCATTTCCTTCCTTCAAAAACAGGTCCAAAGGCTCCAAAATGAACTCGATGCAGCTAAAGCTCGCCTTTTGCTATACTCTTGCACTGATTTCTCAACACCCTTTTCGCCTCAGCCTCAGATTATTAGCCCTCCACTGCTTTGGAATCATAATGATATTGTTTCTGCTAATTCTTCTGTGTATTTTAATGGAGGAATTTAA

Coding sequence (CDS)

ATGGGATCATTAGCAACAGGAACAAACAATTACTACAGCCCTTGTGCAGCCTGCAAATTCCTAAGAAGAAAATGCATAGCAGGATGCATATTTGCACCCTATTTCCCACCAGAGGAGCCCCAAAAATTCGCCAATGTCCACAAGGTGTTCGGAGCCAGTAACGTGGCGAAGCTCCTCAATGAAGTTCTTCCTCATCAACGACAAGACGCCGTCGTGTCCCTCGCCTACCAAGCAGAGGCCAGAATCAGAGACCCTGTTTATGGCTGTGTTGCCGCCATTTCCTTCCTTCAAAAACAGGTCCAAAGGCTCCAAAATGAACTCGATGCAGCTAAAGCTCGCCTTTTGCTATACTCTTGCACTGATTTCTCAACACCCTTTTCGCCTCAGCCTCAGATTATTAGCCCTCCACTGCTTTGGAATCATAATGATATTGTTTCTGCTAATTCTTCTGTGTATTTTAATGGAGGAATTTAA

Protein sequence

MGSLATGTNNYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSCTDFSTPFSPQPQIISPPLLWNHNDIVSANSSVYFNGGI
Homology
[Close]
BLAST of Cp4.1LG20g02580 vs. Swiss-Prot
Match: LOB_ARATH (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana GN=LOB PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.5e-48
Identity = 93/136 (68.38%), Postives = 107/136 (78.68%), Query Frame = 1 

Query: 4   LATGTNNYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVL 63
           +A+ +N+Y SPCAACKFLRRKC+ GCIFAPYFPPEEP KFANVHK+FGASNV KLLNE+L
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 64  PHQRQDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSCTDFS 123
           PHQR+DAV SLAY+AEAR+RDPVYGCV AIS+LQ+QV RLQ ELDAA A L  Y  +  +
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSA 120

Query: 124 T---------PFSPQP 131
                      F PQP
Sbjct: 121 AGAPGNVVDLVFQPQP 136

[Close]
BLAST of Cp4.1LG20g02580 vs. Swiss-Prot
Match: LBD25_ARATH (LOB domain-containing protein 25 OS=Arabidopsis thaliana GN=LBD25 PE=2 SV=3)

HSP 1 Score: 170.2 bits (430), Expect = 1.7e-41
Identity = 78/111 (70.27%), Postives = 94/111 (84.68%), Query Frame = 1 

Query: 8   TNNYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVLPHQR 67
           +N   SPCAACKFLRRKC + C+FAPYFPPEEP KFANVH++FGASNV+K+L+EV PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 68  QDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYS 119
           +DAV SLAY+AEAR++DPVYGCV AIS LQ+QV RLQ EL+   A L+ Y+
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]
BLAST of Cp4.1LG20g02580 vs. Swiss-Prot
Match: LBD6_ARATH (LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.1e-38
Identity = 76/114 (66.67%), Postives = 92/114 (80.70%), Query Frame = 1 

Query: 4   LATGTNNYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVL 63
           +A+ + N  SPCAACKFLRRKC   C+FAPYFPP++PQKFANVHKVFGASNV KLLNE+ 
Sbjct: 1   MASSSTN--SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELH 60

Query: 64  PHQRQDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLY 118
           P QR+DAV SLAY+A+ R+RDPVYGCV  IS LQ Q+++LQ +L  AK+ L  Y
Sbjct: 61  PSQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]
BLAST of Cp4.1LG20g02580 vs. Swiss-Prot
Match: LBD36_ARATH (LOB domain-containing protein 36 OS=Arabidopsis thaliana GN=LBD36 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 7.6e-37
Identity = 76/124 (61.29%), Postives = 93/124 (75.00%), Query Frame = 1 

Query: 13  SPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 72
           SPCAACKFLRRKC   C+FAPYFPP++PQKFA VHKVFGASNVAKLLNE+  +QR+DAV 
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVN 65

Query: 73  SLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSCTDFSTPFSPQPQI 132
           SL Y+AEAR+RDPVYGCV  IS LQ +++++ ++L+ AK  L  Y       P   QP  
Sbjct: 66  SLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYVGPQAMLPIL-QPHF 125

Query: 133 ISPP 137
           +S P
Sbjct: 126 MSLP 128

[Close]
BLAST of Cp4.1LG20g02580 vs. Swiss-Prot
Match: LBD6_ORYSJ (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=LBD6 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-36
Identity = 71/105 (67.62%), Postives = 86/105 (81.90%), Query Frame = 1 

Query: 13  SPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 72
           SPCAACKFLRRKC   C+FAPYFPP+ PQKF +VH+VFGASNV KLLNE+ P+QR+DAV 
Sbjct: 37  SPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVN 96

Query: 73  SLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLY 118
           SLAY+A+ R+RDPVYGCVA IS LQ+ +++LQ +L  AK  L  Y
Sbjct: 97  SLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKY 141

[Close]
BLAST of Cp4.1LG20g02580 vs. TrEMBL
Match: A0A0A0LTL0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G046305 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 9.9e-68
Identity = 134/169 (79.29%), Postives = 143/169 (84.62%), Query Frame = 1 

Query: 1   MGSLATGTNNYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLN 60
           MGS  T +N+YYSPCAACKFLRRKC+AGC+FAPYFPPEEPQKFANVHKVFGASNVAKLLN
Sbjct: 1   MGSTTT-SNHYYSPCAACKFLRRKCLAGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLN 60

Query: 61  EVLPHQRQDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSCT 120
           EVLPHQRQDAVVSLAY+AEARIRDPVYGCV AISFLQKQVQRLQ ELDAAKARL LYSCT
Sbjct: 61  EVLPHQRQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKARLFLYSCT 120

Query: 121 DFSTPFSPQPQIISP---PLLW---------NHNDIVSANSSVYFNGGI 158
           DFSTPF P  QII+    P++W         NHNDI   N S+YFNGGI
Sbjct: 121 DFSTPFLPHSQIINTPHHPVIWNNNSNYNINNHNDI--NNPSMYFNGGI 166

[Close]
BLAST of Cp4.1LG20g02580 vs. TrEMBL
Match: A0A164ZY59_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_016033 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.4e-50
Identity = 102/147 (69.39%), Postives = 121/147 (82.31%), Query Frame = 1 

Query: 8   TNNYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVLPHQR 67
           +N+Y SPCAACKFLRRKC+ GCIFAPYFPPEEPQKFANVHK+FGASNV KLLNE+LPHQR
Sbjct: 4   SNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQR 63

Query: 68  QDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSCTDFSTPFS 127
           +DAV SLAY+AEAR+RDPVYGCV AISFLQ+QV+RLQ ELDAA A L+ ++C+D S P  
Sbjct: 64  EDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVERLQKELDAANADLIRFACSD-SLPAL 123

Query: 128 PQPQ----IISPPLLWNHNDIVSANSS 151
           PQ Q    +I+ P   N ND++  + S
Sbjct: 124 PQTQRPVDLITTPN--NINDLIGLSGS 147

[Close]
BLAST of Cp4.1LG20g02580 vs. TrEMBL
Match: K7KVP3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 7.1e-50
Identity = 99/149 (66.44%), Postives = 115/149 (77.18%), Query Frame = 1 

Query: 8   TNNYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVLPHQR 67
           +++Y SPCAACKFLRRKC+ GCIFAPYFPPEEPQKFANVHK+FGASNV KLLNE+LPHQR
Sbjct: 16  SSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQR 75

Query: 68  QDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSCTDFSTPFS 127
           +DAV SLAY+AEAR+RDPVYGCV AISFLQ+QVQRLQ ELD+A A LL Y+C D      
Sbjct: 76  EDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDSANADLLRYACNDM----- 135

Query: 128 PQPQIISPPLLWNHNDIVSANSSVYFNGG 157
           P P +  PP +   + I    +     GG
Sbjct: 136 PPPSLSVPPQMPQRSFIARFGNESASGGG 159

[Close]
BLAST of Cp4.1LG20g02580 vs. TrEMBL
Match: I6QHQ7_SOYBN (Elongated petiolule 1 (Fragment) OS=Glycine max GN=ELP1 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 7.1e-50
Identity = 99/149 (66.44%), Postives = 115/149 (77.18%), Query Frame = 1 

Query: 8   TNNYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVLPHQR 67
           +++Y SPCAACKFLRRKC+ GCIFAPYFPPEEPQKFANVHK+FGASNV KLLNE+LPHQR
Sbjct: 4   SSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQR 63

Query: 68  QDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSCTDFSTPFS 127
           +DAV SLAY+AEAR+RDPVYGCV AISFLQ+QVQRLQ ELD+A A LL Y+C D      
Sbjct: 64  EDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDSANADLLRYACNDM----- 123

Query: 128 PQPQIISPPLLWNHNDIVSANSSVYFNGG 157
           P P +  PP +   + I    +     GG
Sbjct: 124 PPPSLSVPPQMPQRSFIARFGNESASGGG 147

[Close]
BLAST of Cp4.1LG20g02580 vs. TrEMBL
Match: K7KVP4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G178900 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 7.1e-50
Identity = 99/149 (66.44%), Postives = 115/149 (77.18%), Query Frame = 1 

Query: 8   TNNYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVLPHQR 67
           +++Y SPCAACKFLRRKC+ GCIFAPYFPPEEPQKFANVHK+FGASNV KLLNE+LPHQR
Sbjct: 4   SSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQR 63

Query: 68  QDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSCTDFSTPFS 127
           +DAV SLAY+AEAR+RDPVYGCV AISFLQ+QVQRLQ ELD+A A LL Y+C D      
Sbjct: 64  EDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDSANADLLRYACNDM----- 123

Query: 128 PQPQIISPPLLWNHNDIVSANSSVYFNGG 157
           P P +  PP +   + I    +     GG
Sbjct: 124 PPPSLSVPPQMPQRSFIARFGNESASGGG 147

[Close]
BLAST of Cp4.1LG20g02580 vs. TAIR10
Match: AT5G63090.2 (AT5G63090.2 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 193.0 bits (489), Expect = 1.4e-49
Identity = 93/136 (68.38%), Postives = 107/136 (78.68%), Query Frame = 1 

Query: 4   LATGTNNYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVL 63
           +A+ +N+Y SPCAACKFLRRKC+ GCIFAPYFPPEEP KFANVHK+FGASNV KLLNE+L
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 64  PHQRQDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSCTDFS 123
           PHQR+DAV SLAY+AEAR+RDPVYGCV AIS+LQ+QV RLQ ELDAA A L  Y  +  +
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSA 120

Query: 124 T---------PFSPQP 131
                      F PQP
Sbjct: 121 AGAPGNVVDLVFQPQP 136

[Close]
BLAST of Cp4.1LG20g02580 vs. TAIR10
Match: AT3G27650.1 (AT3G27650.1 LOB domain-containing protein 25)

HSP 1 Score: 170.2 bits (430), Expect = 9.8e-43
Identity = 78/111 (70.27%), Postives = 94/111 (84.68%), Query Frame = 1 

Query: 8   TNNYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVLPHQR 67
           +N   SPCAACKFLRRKC + C+FAPYFPPEEP KFANVH++FGASNV+K+L+EV PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 68  QDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYS 119
           +DAV SLAY+AEAR++DPVYGCV AIS LQ+QV RLQ EL+   A L+ Y+
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]
BLAST of Cp4.1LG20g02580 vs. TAIR10
Match: AT1G65620.1 (AT1G65620.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 159.5 bits (402), Expect = 1.7e-39
Identity = 76/114 (66.67%), Postives = 92/114 (80.70%), Query Frame = 1 

Query: 4   LATGTNNYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVL 63
           +A+ + N  SPCAACKFLRRKC   C+FAPYFPP++PQKFANVHKVFGASNV KLLNE+ 
Sbjct: 1   MASSSTN--SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELH 60

Query: 64  PHQRQDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLY 118
           P QR+DAV SLAY+A+ R+RDPVYGCV  IS LQ Q+++LQ +L  AK+ L  Y
Sbjct: 61  PSQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]
BLAST of Cp4.1LG20g02580 vs. TAIR10
Match: AT5G66870.1 (AT5G66870.1 ASYMMETRIC LEAVES 2-like 1)

HSP 1 Score: 154.8 bits (390), Expect = 4.3e-38
Identity = 76/124 (61.29%), Postives = 93/124 (75.00%), Query Frame = 1 

Query: 13  SPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 72
           SPCAACKFLRRKC   C+FAPYFPP++PQKFA VHKVFGASNVAKLLNE+  +QR+DAV 
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVN 65

Query: 73  SLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSCTDFSTPFSPQPQI 132
           SL Y+AEAR+RDPVYGCV  IS LQ +++++ ++L+ AK  L  Y       P   QP  
Sbjct: 66  SLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYVGPQAMLPIL-QPHF 125

Query: 133 ISPP 137
           +S P
Sbjct: 126 MSLP 128

[Close]
BLAST of Cp4.1LG20g02580 vs. TAIR10
Match: AT2G30130.1 (AT2G30130.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 150.2 bits (378), Expect = 1.1e-36
Identity = 76/143 (53.15%), Postives = 99/143 (69.23%), Query Frame = 1 

Query: 13  SPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 72
           SPCA+CK LRR+C   CIFAPYFPP++P KFA VHKVFGASNV+K+L E+  HQR DAV 
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 73  SLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSCTDFSTPFSPQPQI 132
           SL ++A AR+RDPVYGCV AIS+LQ QV +LQ +L  A+A +L     +  T      Q+
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPT-LQSHHQV 126

Query: 133 IS-----PPLLWNHNDIVSANSS 151
           +        LL N+N+I + N++
Sbjct: 127 LELDQDHKALLLNNNNINNCNTN 148

[Close]
BLAST of Cp4.1LG20g02580 vs. NCBI nr
Match: gi|700209238|gb|KGN64334.1| (hypothetical protein Csa_1G046305 [Cucumis sativus])

HSP 1 Score: 264.2 bits (674), Expect = 1.4e-67
Identity = 134/169 (79.29%), Postives = 143/169 (84.62%), Query Frame = 1 

Query: 1   MGSLATGTNNYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLN 60
           MGS  T +N+YYSPCAACKFLRRKC+AGC+FAPYFPPEEPQKFANVHKVFGASNVAKLLN
Sbjct: 1   MGSTTT-SNHYYSPCAACKFLRRKCLAGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLN 60

Query: 61  EVLPHQRQDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSCT 120
           EVLPHQRQDAVVSLAY+AEARIRDPVYGCV AISFLQKQVQRLQ ELDAAKARL LYSCT
Sbjct: 61  EVLPHQRQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKARLFLYSCT 120

Query: 121 DFSTPFSPQPQIISP---PLLW---------NHNDIVSANSSVYFNGGI 158
           DFSTPF P  QII+    P++W         NHNDI   N S+YFNGGI
Sbjct: 121 DFSTPFLPHSQIINTPHHPVIWNNNSNYNINNHNDI--NNPSMYFNGGI 166

[Close]
BLAST of Cp4.1LG20g02580 vs. NCBI nr
Match: gi|694370224|ref|XP_009362953.1| (PREDICTED: protein LATERAL ORGAN BOUNDARIES [Pyrus x bretschneideri])

HSP 1 Score: 207.6 bits (527), Expect = 1.6e-50
Identity = 95/127 (74.80%), Postives = 111/127 (87.40%), Query Frame = 1 

Query: 4   LATGTNNYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVL 63
           +A+ +++Y SPCAACKFLRRKC+ GCIFAPYFPPEEPQKFANVHK+FGASNV KLLNE+L
Sbjct: 1   MASSSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELL 60

Query: 64  PHQRQDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSCTDFS 123
           PHQR+DAV SLAY+AEAR+RDPVYGCV AISFLQ+QVQRLQ ELDAA A L+ Y+C + +
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIHYACNEIT 120

Query: 124 TPFSPQP 131
           T   P P
Sbjct: 121 TTVLPSP 127

[Close]
BLAST of Cp4.1LG20g02580 vs. NCBI nr
Match: gi|657965481|ref|XP_008374398.1| (PREDICTED: protein LATERAL ORGAN BOUNDARIES [Malus domestica])

HSP 1 Score: 207.2 bits (526), Expect = 2.1e-50
Identity = 95/127 (74.80%), Postives = 111/127 (87.40%), Query Frame = 1 

Query: 4   LATGTNNYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVL 63
           +A+ +++Y SPCAACKFLRRKC+ GCIFAPYFPPEEPQKFANVHK+FGASNV KLLNE+L
Sbjct: 1   MASSSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELL 60

Query: 64  PHQRQDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSCTDFS 123
           PHQR+DAV SLAY+AEAR+RDPVYGCV AISFLQ+QVQRLQ ELDAA A L+ Y+C + +
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACXELT 120

Query: 124 TPFSPQP 131
           T   P P
Sbjct: 121 TTVLPPP 127

[Close]
BLAST of Cp4.1LG20g02580 vs. NCBI nr
Match: gi|1009130747|ref|XP_015882467.1| (PREDICTED: protein LATERAL ORGAN BOUNDARIES-like [Ziziphus jujuba])

HSP 1 Score: 206.5 bits (524), Expect = 3.5e-50
Identity = 97/135 (71.85%), Postives = 115/135 (85.19%), Query Frame = 1 

Query: 3   SLATGTNNYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEV 62
           S ++ +++Y SPCAACKFLRRKC+ GCIFAPYFPPEEPQKFANVHK+FGASNV KLLNE+
Sbjct: 4   SSSSSSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNEL 63

Query: 63  LPHQRQDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSCTDF 122
           LPHQR+DAV SLAY+AEAR+RDPVYGCV AISFLQ+QVQRLQ ELDAA A L+ ++C + 
Sbjct: 64  LPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRFACNEI 123

Query: 123 STPFS-PQPQIISPP 137
            TP + P PQ +  P
Sbjct: 124 PTPAALPPPQPLMAP 138

[Close]
BLAST of Cp4.1LG20g02580 vs. NCBI nr
Match: gi|1021038824|gb|KZM96605.1| (hypothetical protein DCAR_016033 [Daucus carota subsp. sativus])

HSP 1 Score: 206.5 bits (524), Expect = 3.5e-50
Identity = 102/147 (69.39%), Postives = 121/147 (82.31%), Query Frame = 1 

Query: 8   TNNYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVLPHQR 67
           +N+Y SPCAACKFLRRKC+ GCIFAPYFPPEEPQKFANVHK+FGASNV KLLNE+LPHQR
Sbjct: 4   SNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQR 63

Query: 68  QDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSCTDFSTPFS 127
           +DAV SLAY+AEAR+RDPVYGCV AISFLQ+QV+RLQ ELDAA A L+ ++C+D S P  
Sbjct: 64  EDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVERLQKELDAANADLIRFACSD-SLPAL 123

Query: 128 PQPQ----IISPPLLWNHNDIVSANSS 151
           PQ Q    +I+ P   N ND++  + S
Sbjct: 124 PQTQRPVDLITTPN--NINDLIGLSGS 147

The following BLAST results are available for this feature:
BLAST of Cp4.1LG20g02580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LOB_ARATH2.5e-4868.38Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana GN=LOB PE=2 SV=1[more]
LBD25_ARATH1.7e-4170.27LOB domain-containing protein 25 OS=Arabidopsis thaliana GN=LBD25 PE=2 SV=3[more]
LBD6_ARATH3.1e-3866.67LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1[more]
LBD36_ARATH7.6e-3761.29LOB domain-containing protein 36 OS=Arabidopsis thaliana GN=LBD36 PE=2 SV=1[more]
LBD6_ORYSJ1.3e-3667.62LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=LBD6 PE=2 SV=... [more]
BLAST of Cp4.1LG20g02580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTL0_CUCSA9.9e-6879.29Uncharacterized protein OS=Cucumis sativus GN=Csa_1G046305 PE=4 SV=1[more]
A0A164ZY59_DAUCA2.4e-5069.39Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_016033 PE=4 SV=1[more]
K7KVP3_SOYBN7.1e-5066.44Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I6QHQ7_SOYBN7.1e-5066.44Elongated petiolule 1 (Fragment) OS=Glycine max GN=ELP1 PE=4 SV=1[more]
K7KVP4_SOYBN7.1e-5066.44Uncharacterized protein OS=Glycine max GN=GLYMA_06G178900 PE=4 SV=1[more]
BLAST of Cp4.1LG20g02580 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G63090.21.4e-4968.38 Lateral organ boundaries (LOB) domain family protein[more]
AT3G27650.19.8e-4370.27 LOB domain-containing protein 25[more]
AT1G65620.11.7e-3966.67 Lateral organ boundaries (LOB) domain family protein[more]
AT5G66870.14.3e-3861.29 ASYMMETRIC LEAVES 2-like 1[more]
AT2G30130.11.1e-3653.15 Lateral organ boundaries (LOB) domain family protein[more]
BLAST of Cp4.1LG20g02580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209238|gb|KGN64334.1|1.4e-6779.29hypothetical protein Csa_1G046305 [Cucumis sativus][more]
gi|694370224|ref|XP_009362953.1|1.6e-5074.80PREDICTED: protein LATERAL ORGAN BOUNDARIES [Pyrus x bretschneideri][more]
gi|657965481|ref|XP_008374398.1|2.1e-5074.80PREDICTED: protein LATERAL ORGAN BOUNDARIES [Malus domestica][more]
gi|1009130747|ref|XP_015882467.1|3.5e-5071.85PREDICTED: protein LATERAL ORGAN BOUNDARIES-like [Ziziphus jujuba][more]
gi|1021038824|gb|KZM96605.1|3.5e-5069.39hypothetical protein DCAR_016033 [Daucus carota subsp. sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010199 organ boundary specification between lateral organs and the meristem
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005951 carbamoyl-phosphate synthase complex
molecular_function GO:0016874 ligase activity
molecular_function GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG20g02580.1Cp4.1LG20g02580.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 14..111
score: 1.9
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 13..114
score: 2
NoneNo IPR availableunknownCoilCoilcoord: 93..120
scor
NoneNo IPR availablePANTHERPTHR31301FAMILY NOT NAMEDcoord: 11..134
score: 1.1
NoneNo IPR availablePANTHERPTHR31301:SF17SUBFAMILY NOT NAMEDcoord: 11..134
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG20g02580Cucsa.098680Cucumber (Gy14) v1cgycpeB0203
Cp4.1LG20g02580Cucsa.196600Cucumber (Gy14) v1cgycpeB0559
Cp4.1LG20g02580CmaCh13G008660Cucurbita maxima (Rimu)cmacpeB234
Cp4.1LG20g02580CmaCh18G001850Cucurbita maxima (Rimu)cmacpeB439
Cp4.1LG20g02580CmaCh10G001050Cucurbita maxima (Rimu)cmacpeB083
Cp4.1LG20g02580CmoCh10G001090Cucurbita moschata (Rifu)cmocpeB058
Cp4.1LG20g02580CmoCh18G001460Cucurbita moschata (Rifu)cmocpeB404
Cp4.1LG20g02580CmoCh13G008980Cucurbita moschata (Rifu)cmocpeB201
Cp4.1LG20g02580Cla003443Watermelon (97103) v1cpewmB520
Cp4.1LG20g02580Cla019220Watermelon (97103) v1cpewmB528
Cp4.1LG20g02580Csa1G004170Cucumber (Chinese Long) v2cpecuB520
Cp4.1LG20g02580MELO3C002290Melon (DHL92) v3.5.1cpemeB478
Cp4.1LG20g02580MELO3C026269Melon (DHL92) v3.5.1cpemeB482
Cp4.1LG20g02580ClCG01G013400Watermelon (Charleston Gray)cpewcgB452
Cp4.1LG20g02580ClCG06G017270Watermelon (Charleston Gray)cpewcgB474
Cp4.1LG20g02580CSPI01G08730Wild cucumber (PI 183967)cpecpiB505
Cp4.1LG20g02580CSPI01G01120Wild cucumber (PI 183967)cpecpiB522
Cp4.1LG20g02580Lsi06G015820Bottle gourd (USVL1VR-Ls)cpelsiB431
Cp4.1LG20g02580Lsi02G004020Bottle gourd (USVL1VR-Ls)cpelsiB418
Cp4.1LG20g02580MELO3C002290.2Melon (DHL92) v3.6.1cpemedB560
Cp4.1LG20g02580MELO3C026269.2Melon (DHL92) v3.6.1cpemedB567
Cp4.1LG20g02580CsaV3_1G001230Cucumber (Chinese Long) v3cpecucB0638
Cp4.1LG20g02580CsaV3_3G042760Cucumber (Chinese Long) v3cpecucB0644
Cp4.1LG20g02580CsaV3_1G008750Cucumber (Chinese Long) v3cpecucB0623
Cp4.1LG20g02580Bhi08G001340Wax gourdcpewgoB0638
Cp4.1LG20g02580Bhi06G000463Wax gourdcpewgoB0625
Cp4.1LG20g02580CsGy1G001160Cucumber (Gy14) v2cgybcpeB085
Cp4.1LG20g02580CsGy1G008660Cucumber (Gy14) v2cgybcpeB069
Cp4.1LG20g02580Carg06744Silver-seed gourdcarcpeB0696
Cp4.1LG20g02580Carg10325Silver-seed gourdcarcpeB0511
Cp4.1LG20g02580Carg07659Silver-seed gourdcarcpeB1401
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG20g02580Cp4.1LG09g10070Cucurbita pepo (Zucchini)cpecpeB049
Cp4.1LG20g02580Cp4.1LG18g08740Cucurbita pepo (Zucchini)cpecpeB350
Cp4.1LG20g02580Cp4.1LG04g15850Cucurbita pepo (Zucchini)cpecpeB440
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG20g02580Wild cucumber (PI 183967)cpecpiB517
Cp4.1LG20g02580Cucumber (Chinese Long) v2cpecuB505
Cp4.1LG20g02580Cucumber (Chinese Long) v2cpecuB515
Cp4.1LG20g02580Watermelon (Charleston Gray)cpewcgB469
Cp4.1LG20g02580Watermelon (97103) v1cpewmB509
Cp4.1LG20g02580Melon (DHL92) v3.5.1cpemeB470
Cp4.1LG20g02580Cucumber (Gy14) v2cgybcpeB080
Cp4.1LG20g02580Melon (DHL92) v3.6.1cpemedB552
Cp4.1LG20g02580Cucumber (Chinese Long) v3cpecucB0634