Carg06744 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg06744
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	LOB domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_012 : 719566 .. 720048 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATCATCATCAAGAACAGAAACAAGCCATTACTACAGCCCTTGTGCAGCCTGCAGATTCCTAAGAAGAAAATGCATAGCAGGATGTGTTTATGCGCCATATTTTCCACCAGAGGACCCTCAAAAATTTGCCAATGTTCATAAGGTTTTTGGAGCAAGCAACGTAGCCAAGCTGCTCAACGAAGTTCTTCCTCATCAAAGACAAGACGCCGTCGTTTCACTCGCATATGAAGCCGAGGCTAGAATAAAAGATCCTGTTTATGGCTGTGTTGGTGCCATTTCATGCCTCCAAAAACAGGTCCAAAGGCTCCAAAAGGAGCTCGATGCAGCTAAAGCTCGTCTTTGTCTCTTCTCTTTCACTGACTTTTCAGCTCCCTTTTCATCTCAGCCTCAAATTATTAGCCCTCCTATGATTTGGAATAGTAACAATTATGATATCGTTTATGCTAATTCTTCTATGTATTTTAATGGAGGAATTTGA

mRNA sequence

ATGGGATCATCATCAAGAACAGAAACAAGCCATTACTACAGCCCTTGTGCAGCCTGCAGATTCCTAAGAAGAAAATGCATAGCAGGATGTGTTTATGCGCCATATTTTCCACCAGAGGACCCTCAAAAATTTGCCAATGTTCATAAGGTTTTTGGAGCAAGCAACGTAGCCAAGCTGCTCAACGAAGTTCTTCCTCATCAAAGACAAGACGCCGTCGTTTCACTCGCATATGAAGCCGAGGCTAGAATAAAAGATCCTGTTTATGGCTGTGTTGGTGCCATTTCATGCCTCCAAAAACAGGTCCAAAGGCTCCAAAAGGAGCTCGATGCAGCTAAAGCTCGTCTTTGTCTCTTCTCTTTCACTGACTTTTCAGCTCCCTTTTCATCTCAGCCTCAAATTATTAGCCCTCCTATGATTTGGAATAGTAACAATTATGATATCGTTTATGCTAATTCTTCTATGTATTTTAATGGAGGAATTTGA

Coding sequence (CDS)

ATGGGATCATCATCAAGAACAGAAACAAGCCATTACTACAGCCCTTGTGCAGCCTGCAGATTCCTAAGAAGAAAATGCATAGCAGGATGTGTTTATGCGCCATATTTTCCACCAGAGGACCCTCAAAAATTTGCCAATGTTCATAAGGTTTTTGGAGCAAGCAACGTAGCCAAGCTGCTCAACGAAGTTCTTCCTCATCAAAGACAAGACGCCGTCGTTTCACTCGCATATGAAGCCGAGGCTAGAATAAAAGATCCTGTTTATGGCTGTGTTGGTGCCATTTCATGCCTCCAAAAACAGGTCCAAAGGCTCCAAAAGGAGCTCGATGCAGCTAAAGCTCGTCTTTGTCTCTTCTCTTTCACTGACTTTTCAGCTCCCTTTTCATCTCAGCCTCAAATTATTAGCCCTCCTATGATTTGGAATAGTAACAATTATGATATCGTTTATGCTAATTCTTCTATGTATTTTAATGGAGGAATTTGA

Protein sequence

MGSSSRTETSHYYSPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSFTDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI

Homology

[Close]

BLAST of Carg06744 vs. NCBI nr
Match: XP_022954529.1 (protein LATERAL ORGAN BOUNDARIES-like [Cucurbita moschata])

HSP 1 Score: 332.4 bits (851), Expect = 8.4e-88
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MGSSSRTETSHYYSPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60
           MGSSSRTETSHYYSPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL
Sbjct: 1   MGSSSRTETSHYYSPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60

Query: 61  NEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120
           NEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF
Sbjct: 61  NEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120

Query: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 161
           TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI
Sbjct: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 160

[Close]

BLAST of Carg06744 vs. NCBI nr
Match: XP_023542328.1 (protein LATERAL ORGAN BOUNDARIES-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 331.3 bits (848), Expect = 1.9e-87
Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MGSSSRTETSHYYSPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60
           MGSSSRTETSHYYSPCAAC+FLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL
Sbjct: 1   MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60

Query: 61  NEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120
           NEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF
Sbjct: 61  NEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120

Query: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 161
           TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI
Sbjct: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 160

[Close]

BLAST of Carg06744 vs. NCBI nr
Match: XP_022994675.1 (protein LATERAL ORGAN BOUNDARIES-like [Cucurbita maxima])

HSP 1 Score: 322.4 bits (825), Expect = 8.7e-85
Identity = 157/160 (98.12%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MGSSSRTETSHYYSPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60
           MGSSSRTETSHYYSPCAAC+FLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL
Sbjct: 1   MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60

Query: 61  NEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120
           NEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAIS LQKQVQRLQKELDAAKARL LFSF
Sbjct: 61  NEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISFLQKQVQRLQKELDAAKARLRLFSF 120

Query: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 161
           TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI
Sbjct: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 160

[Close]

BLAST of Carg06744 vs. NCBI nr
Match: XP_022924080.1 (protein LATERAL ORGAN BOUNDARIES-like [Cucurbita moschata])

HSP 1 Score: 272.7 bits (696), Expect = 7.9e-70
Identity = 134/160 (83.75%), Postives = 146/160 (91.25%), Query Frame = 0


Query: 1   MGSSSRTETSHYYSPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60
           MGS + T T+HYYSPCAAC+FLRRKCIAGC++APYFPPE+PQKFANVHKVFGASNVAKLL
Sbjct: 3   MGSLA-TGTNHYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLL 62

Query: 61  NEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120
           NEVLPHQRQDAVVSLAY+AEARI+DPVYGCV AIS LQKQVQRLQ ELDAAKARL L+S 
Sbjct: 63  NEVLPHQRQDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSC 122

Query: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 161
           TDFS PFS QPQIISPP++WN N  DIV ANSS+YFNGGI
Sbjct: 123 TDFSTPFSPQPQIISPPLLWNHN--DIVSANSSVYFNGGI 159

[Close]

BLAST of Carg06744 vs. NCBI nr
Match: XP_023519026.1 (protein LATERAL ORGAN BOUNDARIES-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.0 bits (689), Expect = 5.1e-69
Identity = 133/160 (83.12%), Postives = 146/160 (91.25%), Query Frame = 0


Query: 1   MGSSSRTETSHYYSPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60
           MGS + T T++YYSPCAAC+FLRRKCIAGC++APYFPPE+PQKFANVHKVFGASNVAKLL
Sbjct: 3   MGSLA-TGTNNYYSPCAACKFLRRKCIAGCIFAPYFPPEEPQKFANVHKVFGASNVAKLL 62

Query: 61  NEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120
           NEVLPHQRQDAVVSLAY+AEARI+DPVYGCV AIS LQKQVQRLQ ELDAAKARL L+S 
Sbjct: 63  NEVLPHQRQDAVVSLAYQAEARIRDPVYGCVAAISFLQKQVQRLQNELDAAKARLLLYSC 122

Query: 121 TDFSAPFSSQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 161
           TDFS PFS QPQIISPP++WN N  DIV ANSS+YFNGGI
Sbjct: 123 TDFSTPFSPQPQIISPPLLWNHN--DIVSANSSVYFNGGI 159

[Close]

BLAST of Carg06744 vs. TAIR10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 185.3 bits (469), Expect = 3.0e-47
Identity = 89/125 (71.20%), Postives = 104/125 (83.20%), Query Frame = 0


Query: 1   MGSSSRTETSHYYSPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60
           M SSS +    Y SPCAAC+FLRRKC+ GC++APYFPPE+P KFANVHK+FGASNV KLL
Sbjct: 1   MASSSNS----YNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLL 60

Query: 61  NEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120
           NE+LPHQR+DAV SLAYEAEAR++DPVYGCVGAIS LQ+QV RLQKELDAA A L  +  
Sbjct: 61  NELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGL 120

Query: 121 TDFSA 126
           +  +A
Sbjct: 121 STSAA 121

[Close]

BLAST of Carg06744 vs. TAIR10
Match: AT3G27650.1 (LOB domain-containing protein 25)

HSP 1 Score: 169.1 bits (427), Expect = 2.2e-42
Identity = 77/106 (72.64%), Postives = 93/106 (87.74%), Query Frame = 0


Query: 14  SPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 73
           SPCAAC+FLRRKC + CV+APYFPPE+P KFANVH++FGASNV+K+L+EV PHQR+DAV 
Sbjct: 38  SPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVN 97

Query: 74  SLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFS 120
           SLAYEAEAR+KDPVYGCVGAIS LQ+QV RLQ+EL+   A L  ++
Sbjct: 98  SLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]

BLAST of Carg06744 vs. TAIR10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 157.1 bits (396), Expect = 8.8e-39
Identity = 73/102 (71.57%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 14  SPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 73
           SPCAAC+FLRRKC   CV+APYFPP+ PQKFANVHKVFGASNV KLLNE+ P QR+DAV 
Sbjct: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 74  SLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARL 116
           SLAYEA+ R++DPVYGCVG IS LQ Q+++LQ +L  AK+ L
Sbjct: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSEL 109

[Close]

BLAST of Carg06744 vs. TAIR10
Match: AT5G66870.1 (ASYMMETRIC LEAVES 2-like 1)

HSP 1 Score: 152.5 bits (384), Expect = 2.2e-37
Identity = 75/124 (60.48%), Postives = 92/124 (74.19%), Query Frame = 0


Query: 14  SPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 73
           SPCAAC+FLRRKC   CV+APYFPP+ PQKFA VHKVFGASNVAKLLNE+  +QR+DAV 
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVN 65

Query: 74  SLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSFTDFSAPFSSQPQI 133
           SL YEAEAR++DPVYGCVG IS LQ +++++  +L+ AK  L  +       P   QP  
Sbjct: 66  SLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYVGPQAMLPI-LQPHF 125

Query: 134 ISPP 138
           +S P
Sbjct: 126 MSLP 128

[Close]

BLAST of Carg06744 vs. TAIR10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 146.0 bits (367), Expect = 2.0e-35
Identity = 68/105 (64.76%), Postives = 84/105 (80.00%), Query Frame = 0


Query: 14  SPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 73
           SPCA+C+ LRR+C   C++APYFPP+DP KFA VHKVFGASNV+K+L E+  HQR DAV 
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 74  SLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKAR-LCL 118
           SL +EA AR++DPVYGCVGAIS LQ QV +LQ +L  A+A  LC+
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCI 111

[Close]

BLAST of Carg06744 vs. Swiss-Prot
Match: sp|Q9FML4|LOB_ARATH (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 5.4e-46
Identity = 89/125 (71.20%), Postives = 104/125 (83.20%), Query Frame = 0


Query: 1   MGSSSRTETSHYYSPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 60
           M SSS +    Y SPCAAC+FLRRKC+ GC++APYFPPE+P KFANVHK+FGASNV KLL
Sbjct: 1   MASSSNS----YNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLL 60

Query: 61  NEVLPHQRQDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSF 120
           NE+LPHQR+DAV SLAYEAEAR++DPVYGCVGAIS LQ+QV RLQKELDAA A L  +  
Sbjct: 61  NELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGL 120

Query: 121 TDFSA 126
           +  +A
Sbjct: 121 STSAA 121

[Close]

BLAST of Carg06744 vs. Swiss-Prot
Match: sp|Q8L8Q3|LBD25_ARATH (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 169.1 bits (427), Expect = 4.0e-41
Identity = 77/106 (72.64%), Postives = 93/106 (87.74%), Query Frame = 0


Query: 14  SPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 73
           SPCAAC+FLRRKC + CV+APYFPPE+P KFANVH++FGASNV+K+L+EV PHQR+DAV 
Sbjct: 38  SPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVN 97

Query: 74  SLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFS 120
           SLAYEAEAR+KDPVYGCVGAIS LQ+QV RLQ+EL+   A L  ++
Sbjct: 98  SLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]

BLAST of Carg06744 vs. Swiss-Prot
Match: sp|O04479|AS2_ARATH (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.6e-37
Identity = 73/102 (71.57%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 14  SPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 73
           SPCAAC+FLRRKC   CV+APYFPP+ PQKFANVHKVFGASNV KLLNE+ P QR+DAV 
Sbjct: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 74  SLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARL 116
           SLAYEA+ R++DPVYGCVG IS LQ Q+++LQ +L  AK+ L
Sbjct: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSEL 109

[Close]

BLAST of Carg06744 vs. Swiss-Prot
Match: sp|Q9FKZ3|LBD36_ARATH (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.9e-36
Identity = 75/124 (60.48%), Postives = 92/124 (74.19%), Query Frame = 0


Query: 14  SPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 73
           SPCAAC+FLRRKC   CV+APYFPP+ PQKFA VHKVFGASNVAKLLNE+  +QR+DAV 
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVN 65

Query: 74  SLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSFTDFSAPFSSQPQI 133
           SL YEAEAR++DPVYGCVG IS LQ +++++  +L+ AK  L  +       P   QP  
Sbjct: 66  SLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYVGPQAMLPI-LQPHF 125

Query: 134 ISPP 138
           +S P
Sbjct: 126 MSLP 128

[Close]

BLAST of Carg06744 vs. Swiss-Prot
Match: sp|Q32SG3|LBD6_MAIZE (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.5e-35
Identity = 69/102 (67.65%), Postives = 85/102 (83.33%), Query Frame = 0


Query: 14  SPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 73
           SPCAAC+FLRRKC   CV+APYFPP++PQKF +VH+VFGASNV KLLNE+ P QR+DAV 
Sbjct: 32  SPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDAVN 91

Query: 74  SLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARL 116
           SLAYEA+ R++DPVYGCVG IS LQ  +++LQ++L  AK  L
Sbjct: 92  SLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYEL 133

[Close]

BLAST of Carg06744 vs. TrEMBL
Match: tr|A0A0A0LTL0|A0A0A0LTL0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046305 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.3e-64
Identity = 129/164 (78.66%), Postives = 141/164 (85.98%), Query Frame = 0


Query: 5   SRTETSHYYSPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVL 64
           S T ++HYYSPCAAC+FLRRKC+AGCV+APYFPPE+PQKFANVHKVFGASNVAKLLNEVL
Sbjct: 3   STTTSNHYYSPCAACKFLRRKCLAGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVL 62

Query: 65  PHQRQDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSFTDFS 124
           PHQRQDAVVSLAYEAEARI+DPVYGCVGAIS LQKQVQRLQKELDAAKARL L+S TDFS
Sbjct: 63  PHQRQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKARLFLYSCTDFS 122

Query: 125 APFSSQPQIISP---PMIWNSN-NYDI----VYANSSMYFNGGI 161
            PF    QII+    P+IWN+N NY+I       N SMYFNGGI
Sbjct: 123 TPFLPHSQIINTPHHPVIWNNNSNYNINNHNDINNPSMYFNGGI 166

[Close]

BLAST of Carg06744 vs. TrEMBL
Match: tr|H2D439|H2D439_MEDTR (Elongated petiolule 1 OS=Medicago truncatula OX=3880 GN=ELP1 PE=2 SV=2)

HSP 1 Score: 199.1 bits (505), Expect = 7.4e-48
Identity = 97/152 (63.82%), Postives = 122/152 (80.26%), Query Frame = 0


Query: 9   TSHYYSPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQR 68
           +S Y SPCAAC+FLRRKC+ GC++APYFPPE+PQKFANVHK+FGASNV K+LNE+LPHQR
Sbjct: 4   SSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKILNELLPHQR 63

Query: 69  QDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSFTDFSAPFS 128
           +DAV SLAYEAEAR++DPVYGCVGAIS LQ+QVQRLQKELD+A A L  F++ + S P S
Sbjct: 64  EDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDSANADLLRFAYNEIS-PNS 123

Query: 129 SQPQIISPPMIWNSNNYDIVYANSSMYFNGGI 161
           S P +  PP++  ++ +      SS + NG +
Sbjct: 124 SLPPL--PPLVVPASFHQSQRQFSSRFGNGNV 152

[Close]

BLAST of Carg06744 vs. TrEMBL
Match: tr|I6QB37|I6QB37_PEA (Elongated petiolule 1-like protein OS=Pisum sativum OX=3888 GN=APU PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.3e-47
Identity = 94/135 (69.63%), Postives = 115/135 (85.19%), Query Frame = 0


Query: 9   TSHYYSPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQR 68
           +S Y SPCAAC+FLRRKC+ GC++APYFPPE+PQKFANVHK+FGASNV K+LNE+LPHQR
Sbjct: 4   SSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKILNELLPHQR 63

Query: 69  QDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSFTDFSAPFS 128
           +DAV SLAYEAEAR++DPVYGCVGAIS LQ+Q+QRLQKELD+A A L  F++ D S P S
Sbjct: 64  EDAVNSLAYEAEARVRDPVYGCVGAISFLQRQIQRLQKELDSANADLLRFAYNDLS-PNS 123

Query: 129 SQPQIISPPMIWNSN 144
           S P +  PP++  S+
Sbjct: 124 SLPPL--PPLVVQSS 135

[Close]

BLAST of Carg06744 vs. TrEMBL
Match: tr|A0A0L9UD74|A0A0L9UD74_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan04g065700 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.6e-47
Identity = 91/131 (69.47%), Postives = 111/131 (84.73%), Query Frame = 0


Query: 9   TSHYYSPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQR 68
           +S Y SPCAAC+FLRRKC++GC++APYFPPE+PQKFANVHK+FGASNV KLLNE+LPHQR
Sbjct: 4   SSSYNSPCAACKFLRRKCLSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQR 63

Query: 69  QDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSFTDFSAPFS 128
           +DAV SLAYEAEAR++DPVYGCVGAIS LQ+QVQRLQKELD+A A L  +++ D  +P  
Sbjct: 64  EDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDSANADLLRYAYNDMPSPSL 123

Query: 129 SQPQIISPPMI 140
           S P  ++   I
Sbjct: 124 SVPPAMTATTI 134

[Close]

BLAST of Carg06744 vs. TrEMBL
Match: tr|A0A0S3RG47|A0A0S3RG47_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G236800 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.6e-47
Identity = 91/131 (69.47%), Postives = 111/131 (84.73%), Query Frame = 0


Query: 9   TSHYYSPCAACRFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQR 68
           +S Y SPCAAC+FLRRKC++GC++APYFPPE+PQKFANVHK+FGASNV KLLNE+LPHQR
Sbjct: 4   SSSYNSPCAACKFLRRKCLSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQR 63

Query: 69  QDAVVSLAYEAEARIKDPVYGCVGAISCLQKQVQRLQKELDAAKARLCLFSFTDFSAPFS 128
           +DAV SLAYEAEAR++DPVYGCVGAIS LQ+QVQRLQKELD+A A L  +++ D  +P  
Sbjct: 64  EDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDSANADLLRYAYNDMPSPSL 123

Query: 129 SQPQIISPPMI 140
           S P  ++   I
Sbjct: 124 SVPPAMTATTI 134

The following BLAST results are available for this feature:

BLAST of Carg06744 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954529.1	8.4e-88	100.00	protein LATERAL ORGAN BOUNDARIES-like [Cucurbita moschata]	[more]
XP_023542328.1	1.9e-87	99.38	protein LATERAL ORGAN BOUNDARIES-like [Cucurbita pepo subsp. pepo]	[more]
XP_022994675.1	8.7e-85	98.13	protein LATERAL ORGAN BOUNDARIES-like [Cucurbita maxima]	[more]
XP_022924080.1	7.9e-70	83.75	protein LATERAL ORGAN BOUNDARIES-like [Cucurbita moschata]	[more]
XP_023519026.1	5.1e-69	83.13	protein LATERAL ORGAN BOUNDARIES-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg06744 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G63090.2	3.0e-47	71.20	Lateral organ boundaries (LOB) domain family protein	[more]
AT3G27650.1	2.2e-42	72.64	LOB domain-containing protein 25	[more]
AT1G65620.1	8.8e-39	71.57	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G66870.1	2.2e-37	60.48	ASYMMETRIC LEAVES 2-like 1	[more]
AT2G30130.1	2.0e-35	64.76	Lateral organ boundaries (LOB) domain family protein	[more]

BLAST of Carg06744 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FML4\|LOB_ARATH	5.4e-46	71.20	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]
sp\|Q8L8Q3\|LBD25_ARATH	4.0e-41	72.64	LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S...	[more]
sp\|O04479\|AS2_ARATH	1.6e-37	71.57	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
sp\|Q9FKZ3\|LBD36_ARATH	3.9e-36	60.48	LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 S...	[more]
sp\|Q32SG3\|LBD6_MAIZE	1.5e-35	67.65	LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1	[more]

BLAST of Carg06744 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LTL0\|A0A0A0LTL0_CUCSA	3.3e-64	78.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046305 PE=4 SV=1	[more]
tr\|H2D439\|H2D439_MEDTR	7.4e-48	63.82	Elongated petiolule 1 OS=Medicago truncatula OX=3880 GN=ELP1 PE=2 SV=2	[more]
tr\|I6QB37\|I6QB37_PEA	1.3e-47	69.63	Elongated petiolule 1-like protein OS=Pisum sativum OX=3888 GN=APU PE=4 SV=1	[more]
tr\|A0A0L9UD74\|A0A0L9UD74_PHAAN	1.6e-47	69.47	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan04g065700 PE...	[more]
tr\|A0A0S3RG47\|A0A0S3RG47_PHAAN	1.6e-47	69.47	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004883	LOB

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06744-RA	Carg06744-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..114
None	No IPR available	PANTHER	PTHR31301	FAMILY NOT NAMED	coord: 10..119
None	No IPR available	PANTHER	PTHR31301:SF12	LOB DOMAIN-CONTAINING PROTEIN 25	coord: 10..119
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 15..112 e-value: 2.2E-41 score: 140.3
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 14..115 score: 26.653

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg06744	Cla003443	Watermelon (97103) v1	carwmB0492
Carg06744	MELO3C002290	Melon (DHL92) v3.5.1	carmeB0499
Carg06744	ClCG01G013400	Watermelon (Charleston Gray)	carwcgB0477
Carg06744	CSPI01G08730	Wild cucumber (PI 183967)	carcpiB0531
Carg06744	Cucsa.098680	Cucumber (Gy14) v1	carcgyB0567
Carg06744	CmaCh18G001850	Cucurbita maxima (Rimu)	carcmaB0692
Carg06744	CmaCh13G008660	Cucurbita maxima (Rimu)	carcmaB0690
Carg06744	CmoCh18G001460	Cucurbita moschata (Rifu)	carcmoB0673
Carg06744	CmoCh13G008980	Cucurbita moschata (Rifu)	carcmoB0671
Carg06744	Lsi02G004020	Bottle gourd (USVL1VR-Ls)	carlsiB447
Carg06744	Cp4.1LG20g02580	Cucurbita pepo (Zucchini)	carcpeB0696
Carg06744	Cp4.1LG09g10070	Cucurbita pepo (Zucchini)	carcpeB0694
Carg06744	CsGy1G008660	Cucumber (Gy14) v2	carcgybB0500
Carg06744	MELO3C002290.2	Melon (DHL92) v3.6.1	carmedB0504
Carg06744	CsaV3_1G008750	Cucumber (Chinese Long) v3	carcucB0529
Carg06744	Cla97C01G012460	Watermelon (97103) v2	carwmbB0514
Carg06744	Cla97C06G126950	Watermelon (97103) v2	carwmbB0520
Carg06744	Cla97C09G180710	Watermelon (97103) v2	carwmbB0522
Carg06744	Bhi06G000463	Wax gourd	carwgoB0597
Carg06744	Bhi08G001340	Wax gourd	carwgoB0601

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg06744	Carg10325	Silver-seed gourd	carcarB389
Carg06744	Carg07659	Silver-seed gourd	carcarB482
Carg06744	Carg20207	Silver-seed gourd	carcarB484

The following block(s) are covering this gene:


Gene	Organism	Block
Carg06744	Silver-seed gourd	carcarB479
Carg06744	Silver-seed gourd	carcarB481
Carg06744	Cucurbita maxima (Rimu)	carcmaB0686
Carg06744	Cucurbita maxima (Rimu)	carcmaB0688
Carg06744	Cucurbita maxima (Rimu)	carcmaB0689
Carg06744	Cucurbita moschata (Rifu)	carcmoB0667
Carg06744	Cucurbita moschata (Rifu)	carcmoB0669
Carg06744	Cucurbita moschata (Rifu)	carcmoB0670
Carg06744	Cucurbita pepo (Zucchini)	carcpeB0695
Carg06744	Cucurbita pepo (Zucchini)	carcpeB0698
Carg06744	Cucurbita pepo (Zucchini)	carcpeB0699
Carg06744	Wild cucumber (PI 183967)	carcpiB0532
Carg06744	Cucumber (Chinese Long) v2	carcuB0523
Carg06744	Cucumber (Chinese Long) v3	carcucB0530
Carg06744	Bottle gourd (USVL1VR-Ls)	carlsiB448
Carg06744	Melon (DHL92) v3.5.1	carmeB0500
Carg06744	Melon (DHL92) v3.6.1	carmedB0505
Carg06744	Watermelon (Charleston Gray)	carwcgB0482
Carg06744	Watermelon (Charleston Gray)	carwcgB0484
Carg06744	Watermelon (97103) v1	carwmB0494