Cla003443 (gene) Watermelon (97103) v1

Overview
NameCla003443
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionLOB domain protein (AHRD V1 ***- Q9AS62_ORYSJ); contains Interpro domain(s) IPR004883 Lateral organ boundaries, LOB
LocationChr1 : 13136086 .. 13136589 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATCAACAACAACAAACAGCCATTATTATAGCCCTTGTGCAGCTTGCAAATTCCTAAGAAGAAAATGCTTAGAAGGATGTGTTTTTGCACCCTATTTTCCACCTGAAGAACCCCAAAAATTTGCCAATGTCCACAAGGTATTCGGAGCGAGTAACGTTGCGAAGCTCCTGAACGACGTTCTTCCTCATCAACGACAAGATGCCGTGGTTTCGCTTGCCTATGAAGCCGAGGCGAGAATCAGAGATCCTGTTTATGGCTGTGTTGGAGCAATTTCTTTCCTCCAAAAACAGGTCCAAAAGCTCCAAAAAGAACTTGATGCTGCTAAAGCTTGCCTTTTTCTCTACTCTTGCACTGATTTCTCAACTCCCCTTTTGCCTCCTCACCCTCAGATTATTACTACTCCTCATCCACTGATTTGGAATAATAATCTTAATCTTAATCTTAATAATAATAATCATGATATTACTAATTCTTCTATGTATTTTAATGGAGGAATTTGA

mRNA sequence

ATGGGATCAACAACAACAAACAGCCATTATTATAGCCCTTGTGCAGCTTGCAAATTCCTAAGAAGAAAATGCTTAGAAGGATGTGTTTTTGCACCCTATTTTCCACCTGAAGAACCCCAAAAATTTGCCAATGTCCACAAGGTATTCGGAGCGAGTAACGTTGCGAAGCTCCTGAACGACGTTCTTCCTCATCAACGACAAGATGCCGTGGTTTCGCTTGCCTATGAAGCCGAGGCGAGAATCAGAGATCCTGTTTATGGCTGTGTTGGAGCAATTTCTTTCCTCCAAAAACAGGTCCAAAAGCTCCAAAAAGAACTTGATGCTGCTAAAGCTTGCCTTTTTCTCTACTCTTGCACTGATTTCTCAACTCCCCTTTTGCCTCCTCACCCTCAGATTATTACTACTCCTCATCCACTGATTTGGAATAATAATCTTAATCTTAATCTTAATAATAATAATCATGATATTACTAATTCTTCTATGTATTTTAATGGAGGAATTTGA

Coding sequence (CDS)

ATGGGATCAACAACAACAAACAGCCATTATTATAGCCCTTGTGCAGCTTGCAAATTCCTAAGAAGAAAATGCTTAGAAGGATGTGTTTTTGCACCCTATTTTCCACCTGAAGAACCCCAAAAATTTGCCAATGTCCACAAGGTATTCGGAGCGAGTAACGTTGCGAAGCTCCTGAACGACGTTCTTCCTCATCAACGACAAGATGCCGTGGTTTCGCTTGCCTATGAAGCCGAGGCGAGAATCAGAGATCCTGTTTATGGCTGTGTTGGAGCAATTTCTTTCCTCCAAAAACAGGTCCAAAAGCTCCAAAAAGAACTTGATGCTGCTAAAGCTTGCCTTTTTCTCTACTCTTGCACTGATTTCTCAACTCCCCTTTTGCCTCCTCACCCTCAGATTATTACTACTCCTCATCCACTGATTTGGAATAATAATCTTAATCTTAATCTTAATAATAATAATCATGATATTACTAATTCTTCTATGTATTTTAATGGAGGAATTTGA

Protein sequence

MGSTTTNSHYYSPCAACKFLRRKCLEGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNDVLPHQRQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQKLQKELDAAKACLFLYSCTDFSTPLLPPHPQIITTPHPLIWNNNLNLNLNNNNHDITNSSMYFNGGI
Homology
[Close]
BLAST of Cla003443 vs. Swiss-Prot
Match: LOB_ARATH (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana GN=LOB PE=2 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.7e-47
Identity = 90/135 (66.67%), Postives = 106/135 (78.52%), Query Frame = 1 

Query: 5   TTNSHYYSPCAACKFLRRKCLEGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNDVLPH 64
           ++++ Y SPCAACKFLRRKC+ GC+FAPYFPPEEP KFANVHK+FGASNV KLLN++LPH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 65  QRQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQKLQKELDAAKACLFLYSCTDFSTP 124
           QR+DAV SLAYEAEAR+RDPVYGCVGAIS+LQ+QV +LQKELDAA A L  Y  +  +  
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 125 LLPPHPQIITTPHPL 140
                  ++  P PL
Sbjct: 123 APGNVVDLVFQPQPL 137

[Close]
BLAST of Cla003443 vs. Swiss-Prot
Match: LBD25_ARATH (LOB domain-containing protein 25 OS=Arabidopsis thaliana GN=LBD25 PE=2 SV=3)

HSP 1 Score: 169.9 bits (429), Expect = 2.4e-41
Identity = 78/106 (73.58%), Postives = 90/106 (84.91%), Query Frame = 1 

Query: 12  SPCAACKFLRRKCLEGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNDVLPHQRQDAVV 71
           SPCAACKFLRRKC   CVFAPYFPPEEP KFANVH++FGASNV+K+L++V PHQR+DAV 
Sbjct: 38  SPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVN 97

Query: 72  SLAYEAEARIRDPVYGCVGAISFLQKQVQKLQKELDAAKACLFLYS 118
           SLAYEAEAR++DPVYGCVGAIS LQ+QV +LQ+EL+   A L  Y+
Sbjct: 98  SLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]
BLAST of Cla003443 vs. Swiss-Prot
Match: LBD6_ARATH (LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 3.9e-39
Identity = 80/116 (68.97%), Postives = 92/116 (79.31%), Query Frame = 1 

Query: 1   MGSTTTNSHYYSPCAACKFLRRKCLEGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLND 60
           M S++TN    SPCAACKFLRRKC   CVFAPYFPP++PQKFANVHKVFGASNV KLLN+
Sbjct: 1   MASSSTN----SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNE 60

Query: 61  VLPHQRQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQKLQKELDAAKACLFLY 117
           + P QR+DAV SLAYEA+ R+RDPVYGCVG IS LQ Q+++LQ +L  AK+ L  Y
Sbjct: 61  LHPSQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]
BLAST of Cla003443 vs. Swiss-Prot
Match: LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2)

HSP 1 Score: 162.2 bits (409), Expect = 5.1e-39
Identity = 85/160 (53.12%), Postives = 105/160 (65.62%), Query Frame = 1 

Query: 12  SPCAACKFLRRKCLEGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNDVLPHQRQDAVV 71
           SPCA+CK LRR+C + C+FAPYFPP++P KFA VHKVFGASNV+K+L ++  HQR DAV 
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 72  SLAYEAEARIRDPVYGCVGAISFLQKQVQKLQKELDAAKACLFLYSCTDFSTPLLPPHPQ 131
           SL +EA AR+RDPVYGCVGAIS+LQ QV +LQ +L  A+A +        + P L  H Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ--NEPTLQSHHQ 126

Query: 132 IITTPHP----LIWNNNL---NLNLNNNNHDITNSSMYFN 165
           ++         L+ NNN+   N N NNNN     SS  FN
Sbjct: 127 VLELDQDHKALLLNNNNINNCNTNNNNNNFGYAMSSGQFN 164

[Close]
BLAST of Cla003443 vs. Swiss-Prot
Match: LBD36_ARATH (LOB domain-containing protein 36 OS=Arabidopsis thaliana GN=LBD36 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.5e-38
Identity = 77/118 (65.25%), Postives = 91/118 (77.12%), Query Frame = 1 

Query: 12  SPCAACKFLRRKCLEGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNDVLPHQRQDAVV 71
           SPCAACKFLRRKC + CVFAPYFPP++PQKFA VHKVFGASNVAKLLN++  +QR+DAV 
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVN 65

Query: 72  SLAYEAEARIRDPVYGCVGAISFLQKQVQKLQKELDAAKACLFLYSCTDFSTPLLPPH 130
           SL YEAEAR+RDPVYGCVG IS LQ +++++  +L+ AK  L  Y       P+L PH
Sbjct: 66  SLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYVGPQAMLPILQPH 123

[Close]
BLAST of Cla003443 vs. TrEMBL
Match: A0A0A0LTL0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G046305 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 2.7e-79
Identity = 149/168 (88.69%), Postives = 156/168 (92.86%), Query Frame = 1 

Query: 1   MGSTTTNSHYYSPCAACKFLRRKCLEGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLND 60
           MGSTTT++HYYSPCAACKFLRRKCL GCVFAPYFPPEEPQKFANVHKVFGASNVAKLLN+
Sbjct: 1   MGSTTTSNHYYSPCAACKFLRRKCLAGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNE 60

Query: 61  VLPHQRQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQKLQKELDAAKACLFLYSCTD 120
           VLPHQRQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQ+LQKELDAAKA LFLYSCTD
Sbjct: 61  VLPHQRQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKARLFLYSCTD 120

Query: 121 FSTPLLPPHPQIITTP-HPLIWNNNLNLNLNNNNHDITNSSMYFNGGI 168
           FSTP L PH QII TP HP+IWNNN N N+NN+N DI N SMYFNGGI
Sbjct: 121 FSTPFL-PHSQIINTPHHPVIWNNNSNYNINNHN-DINNPSMYFNGGI 166

[Close]
BLAST of Cla003443 vs. TrEMBL
Match: A0A0B2R8U1_GLYSO (Protein LATERAL ORGAN BOUNDARIES OS=Glycine soja GN=glysoja_017478 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.4e-51
Identity = 102/157 (64.97%), Postives = 117/157 (74.52%), Query Frame = 1 

Query: 6   TNSHYYSPCAACKFLRRKCLEGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNDVLPHQ 65
           ++S Y SPCAACKFLRRKCL GC+FAPYFPPEEPQKFANVHK+FGASNV KLLN++LPHQ
Sbjct: 3   SSSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQ 62

Query: 66  RQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQKLQKELDAAKACLFLYSCTDFSTPL 125
           R+DAV SLAYEAEAR+RDPVYGCVGAISFLQ+QVQKLQKELD+A A L  ++C D   P 
Sbjct: 63  REDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQKLQKELDSANADLLRFACNDMPPPS 122

Query: 126 LPPHPQIITTPHPLIWNNNLNLNLNNNNHDITNSSMY 163
           L   PQI           + +    NNN   +    Y
Sbjct: 123 LSVPPQIP--------QRSFSARFGNNNESASGGEFY 151

[Close]
BLAST of Cla003443 vs. TrEMBL
Match: I1JXA7_SOYBN (Elongated petiolule 2 OS=Glycine max GN=ELP2 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.4e-51
Identity = 102/157 (64.97%), Postives = 117/157 (74.52%), Query Frame = 1 

Query: 6   TNSHYYSPCAACKFLRRKCLEGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNDVLPHQ 65
           ++S Y SPCAACKFLRRKCL GC+FAPYFPPEEPQKFANVHK+FGASNV KLLN++LPHQ
Sbjct: 3   SSSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQ 62

Query: 66  RQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQKLQKELDAAKACLFLYSCTDFSTPL 125
           R+DAV SLAYEAEAR+RDPVYGCVGAISFLQ+QVQKLQKELD+A A L  ++C D   P 
Sbjct: 63  REDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQKLQKELDSANADLLRFACNDMPPPS 122

Query: 126 LPPHPQIITTPHPLIWNNNLNLNLNNNNHDITNSSMY 163
           L   PQI           + +    NNN   +    Y
Sbjct: 123 LSVPPQIP--------QRSFSAGFGNNNESASGGEFY 151

[Close]
BLAST of Cla003443 vs. TrEMBL
Match: K7KVP4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G178900 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.2e-50
Identity = 97/127 (76.38%), Postives = 110/127 (86.61%), Query Frame = 1 

Query: 6   TNSHYYSPCAACKFLRRKCLEGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNDVLPHQ 65
           ++S Y SPCAACKFLRRKCL GC+FAPYFPPEEPQKFANVHK+FGASNV KLLN++LPHQ
Sbjct: 3   SSSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQ 62

Query: 66  RQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQKLQKELDAAKACLFLYSCTDFSTPL 125
           R+DAV SLAYEAEAR+RDPVYGCVGAISFLQ+QVQ+LQKELD+A A L  Y+C D   P 
Sbjct: 63  REDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDSANADLLRYACNDMPPPS 122

Query: 126 LPPHPQI 133
           L   PQ+
Sbjct: 123 LSVPPQM 129

[Close]
BLAST of Cla003443 vs. TrEMBL
Match: A0A0B2QCG3_GLYSO (Protein LATERAL ORGAN BOUNDARIES OS=Glycine soja GN=glysoja_012186 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.2e-50
Identity = 97/127 (76.38%), Postives = 110/127 (86.61%), Query Frame = 1 

Query: 6   TNSHYYSPCAACKFLRRKCLEGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNDVLPHQ 65
           ++S Y SPCAACKFLRRKCL GC+FAPYFPPEEPQKFANVHK+FGASNV KLLN++LPHQ
Sbjct: 3   SSSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQ 62

Query: 66  RQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQKLQKELDAAKACLFLYSCTDFSTPL 125
           R+DAV SLAYEAEAR+RDPVYGCVGAISFLQ+QVQ+LQKELD+A A L  Y+C D   P 
Sbjct: 63  REDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDSANADLLRYACNDMPPPS 122

Query: 126 LPPHPQI 133
           L   PQ+
Sbjct: 123 LSVPPQM 129

[Close]
BLAST of Cla003443 vs. NCBI nr
Match: gi|700209238|gb|KGN64334.1| (hypothetical protein Csa_1G046305 [Cucumis sativus])

HSP 1 Score: 302.8 bits (774), Expect = 3.8e-79
Identity = 149/168 (88.69%), Postives = 156/168 (92.86%), Query Frame = 1 

Query: 1   MGSTTTNSHYYSPCAACKFLRRKCLEGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLND 60
           MGSTTT++HYYSPCAACKFLRRKCL GCVFAPYFPPEEPQKFANVHKVFGASNVAKLLN+
Sbjct: 1   MGSTTTSNHYYSPCAACKFLRRKCLAGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNE 60

Query: 61  VLPHQRQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQKLQKELDAAKACLFLYSCTD 120
           VLPHQRQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQ+LQKELDAAKA LFLYSCTD
Sbjct: 61  VLPHQRQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKARLFLYSCTD 120

Query: 121 FSTPLLPPHPQIITTP-HPLIWNNNLNLNLNNNNHDITNSSMYFNGGI 168
           FSTP L PH QII TP HP+IWNNN N N+NN+N DI N SMYFNGGI
Sbjct: 121 FSTPFL-PHSQIINTPHHPVIWNNNSNYNINNHN-DINNPSMYFNGGI 166

[Close]
BLAST of Cla003443 vs. NCBI nr
Match: gi|1009130747|ref|XP_015882467.1| (PREDICTED: protein LATERAL ORGAN BOUNDARIES-like [Ziziphus jujuba])

HSP 1 Score: 212.6 bits (540), Expect = 5.2e-52
Identity = 103/164 (62.80%), Postives = 124/164 (75.61%), Query Frame = 1 

Query: 3   STTTNSHYYSPCAACKFLRRKCLEGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNDVL 62
           S++++S Y SPCAACKFLRRKC+ GC+FAPYFPPEEPQKFANVHK+FGASNV KLLN++L
Sbjct: 5   SSSSSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELL 64

Query: 63  PHQRQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQKLQKELDAAKACLFLYSCTDFS 122
           PHQR+DAV SLAYEAEAR+RDPVYGCVGAISFLQ+QVQ+LQKELDAA A L  ++C +  
Sbjct: 65  PHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRFACNEIP 124

Query: 123 TPLLPPHPQIITTP--HPLIWNNNLNLNLNNNNHDITNSSMYFN 165
           TP   P PQ +  P   PL +     L          ++S  F+
Sbjct: 125 TPAALPPPQPLMAPRHRPLEYGGGRRLGNEGGGAGFYSNSANFS 168

[Close]
BLAST of Cla003443 vs. NCBI nr
Match: gi|1009131000|ref|XP_015882603.1| (PREDICTED: protein LATERAL ORGAN BOUNDARIES-like, partial [Ziziphus jujuba])

HSP 1 Score: 211.1 bits (536), Expect = 1.5e-51
Identity = 103/164 (62.80%), Postives = 122/164 (74.39%), Query Frame = 1 

Query: 3   STTTNSHYYSPCAACKFLRRKCLEGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNDVL 62
           S  ++S Y SPCAACKFLRRKC+ GC+FAPYFPPEEPQKFANVHK+FGASNV KLLN++L
Sbjct: 4   SFASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELL 63

Query: 63  PHQRQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQKLQKELDAAKACLFLYSCTDFS 122
           PHQR+DAV SLAYEAEAR+RDPVYGCVGAISFLQ+QVQ+LQKELDAA A L  ++C +  
Sbjct: 64  PHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRFACNEIP 123

Query: 123 TPLLPPHPQIITTP--HPLIWNNNLNLNLNNNNHDITNSSMYFN 165
           TP   P PQ +  P   PL +     L          ++S  F+
Sbjct: 124 TPAALPPPQPLMAPRHRPLEYGGGRRLGNEGGGAGFYSNSANFS 167

[Close]
BLAST of Cla003443 vs. NCBI nr
Match: gi|657965481|ref|XP_008374398.1| (PREDICTED: protein LATERAL ORGAN BOUNDARIES [Malus domestica])

HSP 1 Score: 209.9 bits (533), Expect = 3.4e-51
Identity = 96/124 (77.42%), Postives = 112/124 (90.32%), Query Frame = 1 

Query: 5   TTNSHYYSPCAACKFLRRKCLEGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNDVLPH 64
           +++S Y SPCAACKFLRRKC+ GC+FAPYFPPEEPQKFANVHK+FGASNV KLLN++LPH
Sbjct: 3   SSSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPH 62

Query: 65  QRQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQKLQKELDAAKACLFLYSCTDFSTP 124
           QR+DAV SLAYEAEAR+RDPVYGCVGAISFLQ+QVQ+LQKELDAA A L  Y+C + +T 
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACXELTTT 122

Query: 125 LLPP 129
           +LPP
Sbjct: 123 VLPP 126

[Close]
BLAST of Cla003443 vs. NCBI nr
Match: gi|356508707|ref|XP_003523096.1| (PREDICTED: protein LATERAL ORGAN BOUNDARIES [Glycine max])

HSP 1 Score: 209.9 bits (533), Expect = 3.4e-51
Identity = 102/157 (64.97%), Postives = 117/157 (74.52%), Query Frame = 1 

Query: 6   TNSHYYSPCAACKFLRRKCLEGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNDVLPHQ 65
           ++S Y SPCAACKFLRRKCL GC+FAPYFPPEEPQKFANVHK+FGASNV KLLN++LPHQ
Sbjct: 3   SSSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQ 62

Query: 66  RQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQKLQKELDAAKACLFLYSCTDFSTPL 125
           R+DAV SLAYEAEAR+RDPVYGCVGAISFLQ+QVQKLQKELD+A A L  ++C D   P 
Sbjct: 63  REDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQKLQKELDSANADLLRFACNDMPPPS 122

Query: 126 LPPHPQIITTPHPLIWNNNLNLNLNNNNHDITNSSMY 163
           L   PQI           + +    NNN   +    Y
Sbjct: 123 LSVPPQIP--------QRSFSAGFGNNNESASGGEFY 151

The following BLAST results are available for this feature:
BLAST of Cla003443 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LOB_ARATH1.7e-4766.67Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana GN=LOB PE=2 SV=1[more]
LBD25_ARATH2.4e-4173.58LOB domain-containing protein 25 OS=Arabidopsis thaliana GN=LBD25 PE=2 SV=3[more]
LBD6_ARATH3.9e-3968.97LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1[more]
LBD12_ARATH5.1e-3953.13LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2[more]
LBD36_ARATH1.5e-3865.25LOB domain-containing protein 36 OS=Arabidopsis thaliana GN=LBD36 PE=2 SV=1[more]
BLAST of Cla003443 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTL0_CUCSA2.7e-7988.69Uncharacterized protein OS=Cucumis sativus GN=Csa_1G046305 PE=4 SV=1[more]
A0A0B2R8U1_GLYSO2.4e-5164.97Protein LATERAL ORGAN BOUNDARIES OS=Glycine soja GN=glysoja_017478 PE=4 SV=1[more]
I1JXA7_SOYBN2.4e-5164.97Elongated petiolule 2 OS=Glycine max GN=ELP2 PE=4 SV=1[more]
K7KVP4_SOYBN1.2e-5076.38Uncharacterized protein OS=Glycine max GN=GLYMA_06G178900 PE=4 SV=1[more]
A0A0B2QCG3_GLYSO1.2e-5076.38Protein LATERAL ORGAN BOUNDARIES OS=Glycine soja GN=glysoja_012186 PE=4 SV=1[more]
BLAST of Cla003443 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209238|gb|KGN64334.1|3.8e-7988.69hypothetical protein Csa_1G046305 [Cucumis sativus][more]
gi|1009130747|ref|XP_015882467.1|5.2e-5262.80PREDICTED: protein LATERAL ORGAN BOUNDARIES-like [Ziziphus jujuba][more]
gi|1009131000|ref|XP_015882603.1|1.5e-5162.80PREDICTED: protein LATERAL ORGAN BOUNDARIES-like, partial [Ziziphus jujuba][more]
gi|657965481|ref|XP_008374398.1|3.4e-5177.42PREDICTED: protein LATERAL ORGAN BOUNDARIES [Malus domestica][more]
gi|356508707|ref|XP_003523096.1|3.4e-5164.97PREDICTED: protein LATERAL ORGAN BOUNDARIES [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0010199 organ boundary specification between lateral organs and the meristem
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005951 carbamoyl-phosphate synthase complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla003443Cla003443.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 13..110
score: 6.4
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 12..113
score: 26
NoneNo IPR availableunknownCoilCoilcoord: 92..112
scor
NoneNo IPR availablePANTHERPTHR31301FAMILY NOT NAMEDcoord: 8..163
score: 1.5
NoneNo IPR availablePANTHERPTHR31301:SF17SUBFAMILY NOT NAMEDcoord: 8..163
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla003443Cla97C01G012460Watermelon (97103) v2wmwmbB248
Cla003443Cla97C06G126950Watermelon (97103) v2wmwmbB274
Cla003443MELO3C026269Melon (DHL92) v3.5.1mewmB280
Cla003443MELO3C002290Melon (DHL92) v3.5.1mewmB157
Cla003443ClCG06G017270Watermelon (Charleston Gray)wcgwmB338
Cla003443ClCG01G013400Watermelon (Charleston Gray)wcgwmB156
Cla003443CSPI01G01120Wild cucumber (PI 183967)cpiwmB052
Cla003443CSPI01G08730Wild cucumber (PI 183967)cpiwmB056
Cla003443Cucsa.196600Cucumber (Gy14) v1cgywmB384
Cla003443Cucsa.098680Cucumber (Gy14) v1cgywmB128
Cla003443CmaCh13G008660Cucurbita maxima (Rimu)cmawmB196
Cla003443CmaCh10G001050Cucurbita maxima (Rimu)cmawmB060
Cla003443CmaCh18G001850Cucurbita maxima (Rimu)cmawmB387
Cla003443CmoCh18G001460Cucurbita moschata (Rifu)cmowmB379
Cla003443CmoCh10G001090Cucurbita moschata (Rifu)cmowmB053
Cla003443CmoCh13G008980Cucurbita moschata (Rifu)cmowmB183
Cla003443Lsi02G004020Bottle gourd (USVL1VR-Ls)lsiwmB207
Cla003443Lsi06G015820Bottle gourd (USVL1VR-Ls)lsiwmB407
Cla003443Cp4.1LG20g02580Cucurbita pepo (Zucchini)cpewmB520
Cla003443CsGy1G008660Cucumber (Gy14) v2cgybwmB053
Cla003443MELO3C002290.2Melon (DHL92) v3.6.1medwmB152
Cla003443MELO3C026269.2Melon (DHL92) v3.6.1medwmB273
Cla003443Carg06744Silver-seed gourdcarwmB0492
Cla003443Carg07659Silver-seed gourdcarwmB1005
Cla003443CsaV3_1G008750Cucumber (Chinese Long) v3cucwmB059
Cla003443CsaV3_1G001230Cucumber (Chinese Long) v3cucwmB056
Cla003443Bhi08G001340Wax gourdwgowmB509
Cla003443Bhi02G000377Wax gourdwgowmB669
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cla003443Cla019220Watermelon (97103) v1wmwmB150
The following block(s) are covering this gene:
GeneOrganismBlock
Cla003443Cucurbita maxima (Rimu)cmawmB383
Cla003443Cucurbita maxima (Rimu)cmawmB571
Cla003443Cucurbita moschata (Rifu)cmowmB566
Cla003443Cucumber (Chinese Long) v2cuwmB053
Cla003443Cucurbita pepo (Zucchini)cpewmB033
Cla003443Cucumber (Gy14) v2cgybwmB060