Cp4.1LG09g10070 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g10070
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLOB domain protein
LocationCp4.1LG09 : 8933543 .. 8934946 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGTTCTTCAAAATTCAAGGCTCTTATGAGTTCATTCATCTGATTTAAGCTTATTTGGTGGTGTTCTTCATATAACGTTAGGTACCCATTTCTTCTAAGAAGCTGCAAAGCAAGGATCTTGAAATTGAAAGCTCTAAGCAACCCAAAAGGTAGCCTCTTTCAGTCTTTTCTTCAAAGAACTTTAATGGGTTCGTGTTGTTCTTGTTATGAACACACATAAAAAGTACCAAAACAACAAAAAGGAAGAGGTTTGGTGCCAAAATTAGCAGTTTTTTTAGATGGGGTTTTCTATTTTTCATTGAAAAAGCTAAAGGGATTCATAAGATTTGAAGAAATCTTCAAAGTTTTCATCTTTTTTTGTCAAAACTAACCATCTTTTTTCGAAAATTAGAGGTTTTTTTCACAAGATTTGAAGAAATCTACAAAGTTTTCATCTTTTTTGGTCAAAATTAACCATTTTTTTTGGAAAATTAGAAGTTTTTTTTCACAAGATTTGAAGAAATCCACCAAGTTTTCATCTTTTTAGGTCAAAATTAACCATTTTTTTGGAAATTTAGAAGTTTTTTTTCACAAGATTTGAAGAAACCCACAAAGTTTTCATCTTTTTATGCCAAAATTAACCATCTTTTTTCGAAAATTAAAAGTTTTTTTCACAAAATTTTCATCTTTTTTGGTCAAAATTAACCATTTTTTTGGAAATTTAGAAGCTTTTTTCACAAGATTTGAAGAAACCCACAAAGTTATCATCTTTTTTGGTCAAAATTAACCATTTGTTTGCTTGAAATTCCAATTTTGCAGATCAAAATGGGATCATCATCAAGAACAGAAACAAGCCATTACTACAGCCCTTGTGCAGCCTGCAAATTCCTAAGAAGAAAATGCATAGCAGGGTGTGTTTATGCGCCATATTTTCCACCAGAGGACCCTCAAAAATTTGCCAATGTTCATAAGGTTTTTGGAGCAAGCAACGTAGCCAAGCTTCTCAACGAAGTTCTTCCTCATCAAAGACAAGACGCCGTCGTTTCACTTGCCTATGAAGCCGAGGCTAGAATAAAAGATCCTGTTTATGGCTGCGTTGGTGCCATTTCATGCCTCCAAAAACAGGTCCAAAGGCTCCAAAAGGAGCTCGATGCAGCTAAAGCTCGTCTTTGTCTCTTCTCTTTCACTGACTTTTCAGCTCCCTTTTCATCTCAGCCTCAAATTATTAGTCCTCCTATGATTTGGAATAGTAACAATTATGATATCGTTTATGCTAATTCTTCTATGTATTTTAATGGAGGAATTTGAAGGAATTTGGAAGGAATTTGAAGGAATTTGGAGGAATTTGGAAGGAATTTGAAGGAATTTGGAGGAATTTTGAGGAATTTGGAAGGAATTTGGAGGAATTAGGCTCCATGTGA

mRNA sequence

ATGAGTATCAAAATGGGATCATCATCAAGAACAGAAACAAGCCATTACTACAGCCCTTGTGCAGCCTGCAAATTCCTAAGAAGAAAATGCATAGCAGGGTGTGTTTATGCGCCATATTTTCCACCAGAGGACCCTCAAAAATTTGCCAATGTTCATAAGGTTTTTGGAGCAAGCAACGTAGCCAAGCTTCTCAACGAAGTTCTTCCTCATCAAAGACAAGACGCCGTCGTTTCACTTGCCTATGAAGCCGAGGCTAGAATAAAAGATCCTGAATTTGGAAGGAATTTGAAGGAATTTGGAGGAATTTGGAAGGAATTTGAAGGAATTTGGAGGAATTTTGAGGAATTTGGAAGGAATTTGGAGGAATTAGGCTCCATGTGA

Coding sequence (CDS)

ATGAGTATCAAAATGGGATCATCATCAAGAACAGAAACAAGCCATTACTACAGCCCTTGTGCAGCCTGCAAATTCCTAAGAAGAAAATGCATAGCAGGGTGTGTTTATGCGCCATATTTTCCACCAGAGGACCCTCAAAAATTTGCCAATGTTCATAAGGTTTTTGGAGCAAGCAACGTAGCCAAGCTTCTCAACGAAGTTCTTCCTCATCAAAGACAAGACGCCGTCGTTTCACTTGCCTATGAAGCCGAGGCTAGAATAAAAGATCCTGAATTTGGAAGGAATTTGAAGGAATTTGGAGGAATTTGGAAGGAATTTGAAGGAATTTGGAGGAATTTTGAGGAATTTGGAAGGAATTTGGAGGAATTAGGCTCCATGTGA

Protein sequence

MSIKMGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVVSLAYEAEARIKDPEFGRNLKEFGGIWKEFEGIWRNFEEFGRNLEELGSM
Homology
[Close]
BLAST of Cp4.1LG09g10070 vs. Swiss-Prot
Match: LOB_ARATH (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana GN=LOB PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 8.2e-34
Identity = 66/89 (74.16%), Postives = 77/89 (86.52%), Query Frame = 1 

Query: 5  MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 64
          M SSS +    Y SPCAACKFLRRKC+ GC++APYFPPE+P KFANVHK+FGASNV KLL
Sbjct: 1  MASSSNS----YNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLL 60

Query: 65 NEVLPHQRQDAVVSLAYEAEARIKDPEFG 94
          NE+LPHQR+DAV SLAYEAEAR++DP +G
Sbjct: 61 NELLPHQREDAVNSLAYEAEARVRDPVYG 85

[Close]
BLAST of Cp4.1LG09g10070 vs. Swiss-Prot
Match: LBD25_ARATH (LOB domain-containing protein 25 OS=Arabidopsis thaliana GN=LBD25 PE=2 SV=3)

HSP 1 Score: 135.6 bits (340), Expect = 3.8e-31
Identity = 59/76 (77.63%), Postives = 70/76 (92.11%), Query Frame = 1 

Query: 18  SPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 77
           SPCAACKFLRRKC + CV+APYFPPE+P KFANVH++FGASNV+K+L+EV PHQR+DAV 
Sbjct: 38  SPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVN 97

Query: 78  SLAYEAEARIKDPEFG 94
           SLAYEAEAR+KDP +G
Sbjct: 98  SLAYEAEARLKDPVYG 113

[Close]
BLAST of Cp4.1LG09g10070 vs. Swiss-Prot
Match: LBD6_ARATH (LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 6.1e-29
Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 1 

Query: 18 SPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 77
          SPCAACKFLRRKC   CV+APYFPP+ PQKFANVHKVFGASNV KLLNE+ P QR+DAV 
Sbjct: 8  SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 78 SLAYEAEARIKDPEFG 94
          SLAYEA+ R++DP +G
Sbjct: 68 SLAYEADMRLRDPVYG 83

[Close]
BLAST of Cp4.1LG09g10070 vs. Swiss-Prot
Match: LBD36_ARATH (LOB domain-containing protein 36 OS=Arabidopsis thaliana GN=LBD36 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.3e-28
Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 1 

Query: 18 SPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 77
          SPCAACKFLRRKC   CV+APYFPP+ PQKFA VHKVFGASNVAKLLNE+  +QR+DAV 
Sbjct: 6  SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVN 65

Query: 78 SLAYEAEARIKDPEFG 94
          SL YEAEAR++DP +G
Sbjct: 66 SLFYEAEARLRDPVYG 81

[Close]
BLAST of Cp4.1LG09g10070 vs. Swiss-Prot
Match: LBD6_ORYSI (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica GN=LBD6 PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.0e-28
Identity = 57/92 (61.96%), Postives = 72/92 (78.26%), Query Frame = 1 

Query: 2   SIKMGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVA 61
           S    +++ T      SPCAACKFLRRKC   CV+APYFPP++PQKF +VH+VFGASNV 
Sbjct: 21  SASASAAANTAACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVT 80

Query: 62  KLLNEVLPHQRQDAVVSLAYEAEARIKDPEFG 94
           KLLNE+ P+QR+DAV SLAYEA+ R++DP +G
Sbjct: 81  KLLNELHPYQREDAVNSLAYEADMRLRDPVYG 112

[Close]
BLAST of Cp4.1LG09g10070 vs. TrEMBL
Match: A0A0A0LTL0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G046305 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 3.8e-38
Identity = 75/85 (88.24%), Postives = 82/85 (96.47%), Query Frame = 1 

Query: 9  SRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVL 68
          S T ++HYYSPCAACKFLRRKC+AGCV+APYFPPE+PQKFANVHKVFGASNVAKLLNEVL
Sbjct: 3  STTTSNHYYSPCAACKFLRRKCLAGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVL 62

Query: 69 PHQRQDAVVSLAYEAEARIKDPEFG 94
          PHQRQDAVVSLAYEAEARI+DP +G
Sbjct: 63 PHQRQDAVVSLAYEAEARIRDPVYG 87

[Close]
BLAST of Cp4.1LG09g10070 vs. TrEMBL
Match: A0A0K9RA28_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_089690 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.7e-33
Identity = 66/87 (75.86%), Postives = 79/87 (90.80%), Query Frame = 1 

Query: 7  SSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNE 66
          +SS + +S Y SPCAACKFLRRKC+ GC++APYFPPE+PQKFANVHK+FGASNV KLLNE
Sbjct: 2  ASSSSSSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNE 61

Query: 67 VLPHQRQDAVVSLAYEAEARIKDPEFG 94
          +LPHQR+DAV SLAYEAEAR++DP +G
Sbjct: 62 LLPHQREDAVNSLAYEAEARVRDPVYG 88

[Close]
BLAST of Cp4.1LG09g10070 vs. TrEMBL
Match: A0A0A9DMU9_ARUDO (Uncharacterized protein OS=Arundo donax PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.2e-33
Identity = 68/92 (73.91%), Postives = 80/92 (86.96%), Query Frame = 1 

Query: 2   SIKMGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVA 61
           ++  G++S T T    +PCAACKFLRRKC+ GCV+APYFPPE+PQKFANVHKVFGASNV 
Sbjct: 11  AVSPGAASGTTTPGAGAPCAACKFLRRKCLPGCVFAPYFPPEEPQKFANVHKVFGASNVT 70

Query: 62  KLLNEVLPHQRQDAVVSLAYEAEARIKDPEFG 94
           KLLNE+LPHQR+DAV SLAYEAEAR+KDP +G
Sbjct: 71  KLLNELLPHQREDAVSSLAYEAEARVKDPVYG 102

[Close]
BLAST of Cp4.1LG09g10070 vs. TrEMBL
Match: J3KWR6_ORYBR (Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.7e-33
Identity = 69/93 (74.19%), Postives = 79/93 (84.95%), Query Frame = 1 

Query: 1   MSIKMGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNV 60
           +S  + S + T T    SPCAACKFLRRKC+ GCV+APYFPPE+PQKFANVHKVFGASNV
Sbjct: 12  ISTVVASGAATTTPGAGSPCAACKFLRRKCLPGCVFAPYFPPEEPQKFANVHKVFGASNV 71

Query: 61  AKLLNEVLPHQRQDAVVSLAYEAEARIKDPEFG 94
            KLLNE+LPHQR+DAV SLAYEAEAR+KDP +G
Sbjct: 72  TKLLNELLPHQREDAVSSLAYEAEARVKDPVYG 104

[Close]
BLAST of Cp4.1LG09g10070 vs. TrEMBL
Match: I1HCD9_BRADI (Uncharacterized protein OS=Brachypodium distachyon GN=BRADI_2g04270 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 4.9e-33
Identity = 68/93 (73.12%), Postives = 79/93 (84.95%), Query Frame = 1 

Query: 1   MSIKMGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNV 60
           +S+   +S+   T    SPCAACKFLRRKC+ GCV+APYFPPE+PQKFANVHKVFGASNV
Sbjct: 12  VSVVAAASASASTPGAGSPCAACKFLRRKCLPGCVFAPYFPPEEPQKFANVHKVFGASNV 71

Query: 61  AKLLNEVLPHQRQDAVVSLAYEAEARIKDPEFG 94
            KLLNE+LPHQR+DAV SLAYEAEAR+KDP +G
Sbjct: 72  TKLLNELLPHQREDAVSSLAYEAEARVKDPVYG 104

[Close]
BLAST of Cp4.1LG09g10070 vs. TAIR10
Match: AT5G63090.2 (AT5G63090.2 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 144.4 bits (363), Expect = 4.6e-35
Identity = 66/89 (74.16%), Postives = 77/89 (86.52%), Query Frame = 1 

Query: 5  MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 64
          M SSS +    Y SPCAACKFLRRKC+ GC++APYFPPE+P KFANVHK+FGASNV KLL
Sbjct: 1  MASSSNS----YNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLL 60

Query: 65 NEVLPHQRQDAVVSLAYEAEARIKDPEFG 94
          NE+LPHQR+DAV SLAYEAEAR++DP +G
Sbjct: 61 NELLPHQREDAVNSLAYEAEARVRDPVYG 85

[Close]
BLAST of Cp4.1LG09g10070 vs. TAIR10
Match: AT3G27650.1 (AT3G27650.1 LOB domain-containing protein 25)

HSP 1 Score: 135.6 bits (340), Expect = 2.2e-32
Identity = 59/76 (77.63%), Postives = 70/76 (92.11%), Query Frame = 1 

Query: 18  SPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 77
           SPCAACKFLRRKC + CV+APYFPPE+P KFANVH++FGASNV+K+L+EV PHQR+DAV 
Sbjct: 38  SPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVN 97

Query: 78  SLAYEAEARIKDPEFG 94
           SLAYEAEAR+KDP +G
Sbjct: 98  SLAYEAEARLKDPVYG 113

[Close]
BLAST of Cp4.1LG09g10070 vs. TAIR10
Match: AT1G65620.1 (AT1G65620.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 128.3 bits (321), Expect = 3.4e-30
Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 1 

Query: 18 SPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 77
          SPCAACKFLRRKC   CV+APYFPP+ PQKFANVHKVFGASNV KLLNE+ P QR+DAV 
Sbjct: 8  SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 78 SLAYEAEARIKDPEFG 94
          SLAYEA+ R++DP +G
Sbjct: 68 SLAYEADMRLRDPVYG 83

[Close]
BLAST of Cp4.1LG09g10070 vs. TAIR10
Match: AT5G66870.1 (AT5G66870.1 ASYMMETRIC LEAVES 2-like 1)

HSP 1 Score: 126.3 bits (316), Expect = 1.3e-29
Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 1 

Query: 18 SPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 77
          SPCAACKFLRRKC   CV+APYFPP+ PQKFA VHKVFGASNVAKLLNE+  +QR+DAV 
Sbjct: 6  SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVN 65

Query: 78 SLAYEAEARIKDPEFG 94
          SL YEAEAR++DP +G
Sbjct: 66 SLFYEAEARLRDPVYG 81

[Close]
BLAST of Cp4.1LG09g10070 vs. TAIR10
Match: AT2G30130.1 (AT2G30130.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 115.9 bits (289), Expect = 1.8e-26
Identity = 50/76 (65.79%), Postives = 62/76 (81.58%), Query Frame = 1 

Query: 18 SPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVLPHQRQDAVV 77
          SPCA+CK LRR+C   C++APYFPP+DP KFA VHKVFGASNV+K+L E+  HQR DAV 
Sbjct: 7  SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 78 SLAYEAEARIKDPEFG 94
          SL +EA AR++DP +G
Sbjct: 67 SLVFEANARVRDPVYG 82

[Close]
BLAST of Cp4.1LG09g10070 vs. NCBI nr
Match: gi|700209238|gb|KGN64334.1| (hypothetical protein Csa_1G046305 [Cucumis sativus])

HSP 1 Score: 165.6 bits (418), Expect = 5.5e-38
Identity = 75/85 (88.24%), Postives = 82/85 (96.47%), Query Frame = 1 

Query: 9  SRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNEVL 68
          S T ++HYYSPCAACKFLRRKC+AGCV+APYFPPE+PQKFANVHKVFGASNVAKLLNEVL
Sbjct: 3  STTTSNHYYSPCAACKFLRRKCLAGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNEVL 62

Query: 69 PHQRQDAVVSLAYEAEARIKDPEFG 94
          PHQRQDAVVSLAYEAEARI+DP +G
Sbjct: 63 PHQRQDAVVSLAYEAEARIRDPVYG 87

[Close]
BLAST of Cp4.1LG09g10070 vs. NCBI nr
Match: gi|1009130747|ref|XP_015882467.1| (PREDICTED: protein LATERAL ORGAN BOUNDARIES-like [Ziziphus jujuba])

HSP 1 Score: 153.3 bits (386), Expect = 2.8e-34
Identity = 68/89 (76.40%), Postives = 80/89 (89.89%), Query Frame = 1 

Query: 5  MGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLL 64
          M SSS + +S Y SPCAACKFLRRKC+ GC++APYFPPE+PQKFANVHK+FGASNV KLL
Sbjct: 1  MASSSSSSSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLL 60

Query: 65 NEVLPHQRQDAVVSLAYEAEARIKDPEFG 94
          NE+LPHQR+DAV SLAYEAEAR++DP +G
Sbjct: 61 NELLPHQREDAVNSLAYEAEARVRDPVYG 89

[Close]
BLAST of Cp4.1LG09g10070 vs. NCBI nr
Match: gi|902210256|gb|KNA16373.1| (hypothetical protein SOVF_089690 [Spinacia oleracea])

HSP 1 Score: 150.2 bits (378), Expect = 2.4e-33
Identity = 66/87 (75.86%), Postives = 79/87 (90.80%), Query Frame = 1 

Query: 7  SSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNVAKLLNE 66
          +SS + +S Y SPCAACKFLRRKC+ GC++APYFPPE+PQKFANVHK+FGASNV KLLNE
Sbjct: 2  ASSSSSSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNE 61

Query: 67 VLPHQRQDAVVSLAYEAEARIKDPEFG 94
          +LPHQR+DAV SLAYEAEAR++DP +G
Sbjct: 62 LLPHQREDAVNSLAYEAEARVRDPVYG 88

[Close]
BLAST of Cp4.1LG09g10070 vs. NCBI nr
Match: gi|573912170|ref|XP_006643800.1| (PREDICTED: protein LATERAL ORGAN BOUNDARIES-like isoform X2 [Oryza brachyantha])

HSP 1 Score: 149.1 bits (375), Expect = 5.3e-33
Identity = 69/93 (74.19%), Postives = 79/93 (84.95%), Query Frame = 1 

Query: 1   MSIKMGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNV 60
           +S  + S + T T    SPCAACKFLRRKC+ GCV+APYFPPE+PQKFANVHKVFGASNV
Sbjct: 12  ISTVVASGAATTTPGAGSPCAACKFLRRKCLPGCVFAPYFPPEEPQKFANVHKVFGASNV 71

Query: 61  AKLLNEVLPHQRQDAVVSLAYEAEARIKDPEFG 94
            KLLNE+LPHQR+DAV SLAYEAEAR+KDP +G
Sbjct: 72  TKLLNELLPHQREDAVSSLAYEAEARVKDPVYG 104

[Close]
BLAST of Cp4.1LG09g10070 vs. NCBI nr
Match: gi|1002838502|ref|XP_015698431.1| (PREDICTED: protein LATERAL ORGAN BOUNDARIES-like isoform X1 [Oryza brachyantha])

HSP 1 Score: 149.1 bits (375), Expect = 5.3e-33
Identity = 69/93 (74.19%), Postives = 79/93 (84.95%), Query Frame = 1 

Query: 1   MSIKMGSSSRTETSHYYSPCAACKFLRRKCIAGCVYAPYFPPEDPQKFANVHKVFGASNV 60
           +S  + S + T T    SPCAACKFLRRKC+ GCV+APYFPPE+PQKFANVHKVFGASNV
Sbjct: 49  ISTVVASGAATTTPGAGSPCAACKFLRRKCLPGCVFAPYFPPEEPQKFANVHKVFGASNV 108

Query: 61  AKLLNEVLPHQRQDAVVSLAYEAEARIKDPEFG 94
            KLLNE+LPHQR+DAV SLAYEAEAR+KDP +G
Sbjct: 109 TKLLNELLPHQREDAVSSLAYEAEARVKDPVYG 141

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g10070 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LOB_ARATH8.2e-3474.16Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana GN=LOB PE=2 SV=1[more]
LBD25_ARATH3.8e-3177.63LOB domain-containing protein 25 OS=Arabidopsis thaliana GN=LBD25 PE=2 SV=3[more]
LBD6_ARATH6.1e-2976.32LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1[more]
LBD36_ARATH2.3e-2876.32LOB domain-containing protein 36 OS=Arabidopsis thaliana GN=LBD36 PE=2 SV=1[more]
LBD6_ORYSI4.0e-2861.96LOB domain-containing protein 6 OS=Oryza sativa subsp. indica GN=LBD6 PE=3 SV=1[more]
BLAST of Cp4.1LG09g10070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTL0_CUCSA3.8e-3888.24Uncharacterized protein OS=Cucumis sativus GN=Csa_1G046305 PE=4 SV=1[more]
A0A0K9RA28_SPIOL1.7e-3375.86Uncharacterized protein OS=Spinacia oleracea GN=SOVF_089690 PE=4 SV=1[more]
A0A0A9DMU9_ARUDO2.2e-3373.91Uncharacterized protein OS=Arundo donax PE=4 SV=1[more]
J3KWR6_ORYBR3.7e-3374.19Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1[more]
I1HCD9_BRADI4.9e-3373.12Uncharacterized protein OS=Brachypodium distachyon GN=BRADI_2g04270 PE=4 SV=1[more]
BLAST of Cp4.1LG09g10070 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G63090.24.6e-3574.16 Lateral organ boundaries (LOB) domain family protein[more]
AT3G27650.12.2e-3277.63 LOB domain-containing protein 25[more]
AT1G65620.13.4e-3076.32 Lateral organ boundaries (LOB) domain family protein[more]
AT5G66870.11.3e-2976.32 ASYMMETRIC LEAVES 2-like 1[more]
AT2G30130.11.8e-2665.79 Lateral organ boundaries (LOB) domain family protein[more]
BLAST of Cp4.1LG09g10070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209238|gb|KGN64334.1|5.5e-3888.24hypothetical protein Csa_1G046305 [Cucumis sativus][more]
gi|1009130747|ref|XP_015882467.1|2.8e-3476.40PREDICTED: protein LATERAL ORGAN BOUNDARIES-like [Ziziphus jujuba][more]
gi|902210256|gb|KNA16373.1|2.4e-3375.86hypothetical protein SOVF_089690 [Spinacia oleracea][more]
gi|573912170|ref|XP_006643800.1|5.3e-3374.19PREDICTED: protein LATERAL ORGAN BOUNDARIES-like isoform X2 [Oryza brachyantha][more]
gi|1002838502|ref|XP_015698431.1|5.3e-3374.19PREDICTED: protein LATERAL ORGAN BOUNDARIES-like isoform X1 [Oryza brachyantha][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0010199 organ boundary specification between lateral organs and the meristem
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005951 carbamoyl-phosphate synthase complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g10070.1Cp4.1LG09g10070.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 19..93
score: 1.0
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 18..120
score: 21
NoneNo IPR availablePANTHERPTHR31301FAMILY NOT NAMEDcoord: 1..93
score: 1.4
NoneNo IPR availablePANTHERPTHR31301:SF12LOB DOMAIN-CONTAINING PROTEIN 25coord: 1..93
score: 1.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG09g10070CmaCh18G001850Cucurbita maxima (Rimu)cmacpeB416
Cp4.1LG09g10070CmoCh18G001460Cucurbita moschata (Rifu)cmocpeB377
Cp4.1LG09g10070MELO3C002290.2Melon (DHL92) v3.6.1cpemedB031
Cp4.1LG09g10070MELO3C026269.2Melon (DHL92) v3.6.1cpemedB040
Cp4.1LG09g10070MELO3C021578.2Melon (DHL92) v3.6.1cpemedB022
Cp4.1LG09g10070CsaV3_5G027150Cucumber (Chinese Long) v3cpecucB0049
Cp4.1LG09g10070CsaV3_1G008750Cucumber (Chinese Long) v3cpecucB0031
Cp4.1LG09g10070CsaV3_1G001230Cucumber (Chinese Long) v3cpecucB0023
Cp4.1LG09g10070Bhi06G000463Wax gourdcpewgoB0024
Cp4.1LG09g10070Bhi08G001340Wax gourdcpewgoB0046
Cp4.1LG09g10070CsGy1G001160Cucumber (Gy14) v2cgybcpeB012
Cp4.1LG09g10070CsGy1G008660Cucumber (Gy14) v2cgybcpeB018
Cp4.1LG09g10070Carg07659Silver-seed gourdcarcpeB1394
Cp4.1LG09g10070Carg06744Silver-seed gourdcarcpeB0694
Cp4.1LG09g10070Carg10325Silver-seed gourdcarcpeB0506
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG09g10070Cp4.1LG18g08740Cucurbita pepo (Zucchini)cpecpeB028
Cp4.1LG09g10070Cp4.1LG20g02580Cucurbita pepo (Zucchini)cpecpeB049
Cp4.1LG09g10070Cp4.1LG04g15850Cucurbita pepo (Zucchini)cpecpeB055
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g10070Wild cucumber (PI 183967)cpecpiB025
Cp4.1LG09g10070Cucurbita pepo (Zucchini)cpecpeB045
Cp4.1LG09g10070Cucumber (Gy14) v1cgycpeB0201
Cp4.1LG09g10070Cucurbita maxima (Rimu)cmacpeB213
Cp4.1LG09g10070Cucurbita maxima (Rimu)cmacpeB214
Cp4.1LG09g10070Cucurbita moschata (Rifu)cmocpeB183
Cp4.1LG09g10070Cucurbita moschata (Rifu)cmocpeB184
Cp4.1LG09g10070Cucumber (Chinese Long) v2cpecuB029
Cp4.1LG09g10070Bottle gourd (USVL1VR-Ls)cpelsiB026
Cp4.1LG09g10070Watermelon (Charleston Gray)cpewcgB026
Cp4.1LG09g10070Watermelon (97103) v1cpewmB033
Cp4.1LG09g10070Melon (DHL92) v3.5.1cpemeB026
Cp4.1LG09g10070Silver-seed gourdcarcpeB1396