Cp4.1LG19g00620 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTTTAAGAAAAACAAAAGTCAGCCCACTTTGTAAAATAAAATAAAAACAATTTATGGATGTACAGACCGACCGAACCGAACCGGTTCGGTTCGATTTTAACCTAACCAATTCAGGAGTGGGTATCCCGAAGTCTCACACGCGTCTTTCTTAACACGCGAAGTTTCTCTCTGCTCTTCCAATTTGCCTCTCTCTCTCTCCCGCCTTCCTCACCGCCGCCCGCAGCCCTTCTCCCATCGACGTCGGTCCCTTTTCAGGCGACATTAAATCAGGTACTGATGAAGAATAGTCCGGGAGGAATTTTCGGATCTGATTTTTCTTTTCTCCTCCTTATTTATTATATCTTCTAATTTTCTTTTTTGTGTTTGTTTGTTTTTTATTTTCTTCGATCCATTTTTGTTCTGTTATGAGCTTTAGATTTTCTGTATGGCAAGGTGAAGAAAAGAGACCCCTTTTTGTGGATCTATTCACGTTTTCTTGTTCTATTTTCAAATTATTTGTATGATTTTTTTTCACCTATCTTTGATCACGATTCTGAAACAACCGTCTTCAATTTCATTCTAAAGATAAAGAGAAGTTACTAAGAGGTTCTTAGTAATCCCCAATCTCAGGCTATATGTATTTGATTCTTAGCTGTTGGGATTTATTCTGATTCAACTCAATCTTCCGGGTATTGTTTGCTATTTTTCTACATTGGCAAACTTTTATTCAGATTCTTTGTTCCTTCTTTCTTCCTGTTTGTGATCTTTTCTGGATTTTCCCTTTTGATTATTAGGGAGGAGAGATATGAAGGTGAACCACAGATTTTTTAGTGCTTCTAAATTGAAAACAGATGGTTGAGACTGATATTAATCTTTCACAAAAGAGAGAAGAAAAAGAGTATTGGTTGGGTATGTGTATCATGTCATTTGAATTAAGAAGGTAGTTGGGTTTGGAATGATGTCTTAGAATAAAAATCTTTGAGTGGCTTTAGGGTTTTTATTGGGATTTGATAATTTTGGATGAGAGAGGAGAGAGTAGATGGAAGCAGAAACTCACAAGTCTCTGCAATTAGGGAGTTCATTTCCTTGTCAAGTTTGTGTTGTGGGTTTCCTCTGTGGAGTTTGTATTGCTTCTCTGTTTCTTGGTGCTTTTACCTTATTTGGTGTCCCTTTGGAATTCACTTTGGAACTCAACTTCTGAAAATATTAGTAAAAGTTGTCATCATCATAGGAACTATTAAGCTTCAGTCATACTATTTTTCATCCAGATATTGTTTATGTTTCTGTTTCTTTTTTTCTAAACATAAATGGTTACGGTCATGCTATGAAAAACTTCATTATGACTTTCTTTTGAAATCTAAGAAAAGAAAGAAATCAAAGAGTATTCTCGGAGGTGTATAAAGCTTTTCAACGATGTTGTTTACCGCACTATATCTTGGTGTAAATTGTCTAATACTTTTGTTTCCTGGAGTCACACCTCCCTTGTAATATGGGGAGGTTTTTTCTATAATTATCATGGACAACACATGCCGTTTGTATATGAAATCGAGAAACAGGAAATTAGAAACAAAAATGTTCGTAAATGAGATTGAGAAACAGGAAATTAGAAACAAAAATGTTATCTATTGGGGCCATTACTTAACTTAATAAAGTTCACATAGATAGATGTAGCTGGTGGAGTTTGGTGCAGTTTGATGTAATCCTGTGTATAATATGGTTCATTTGACTTGGGAACGTATCGATCCATTGCAGTTAGACGATGGCAGCGAAGTACGTGACAGCTTCTCTAGTCGGAACATTTGCAATTGCGTATATTGCTGATTACCTTGTTTCTGACAAGAAAATATTTGGAGGTAATGATAGTTTCTTTGGACTGCGGCCATTGCTTGGCTTTCAGTTTCTTTGATGTGCTACCATTGCTCTGTTGTGTTGATTTAATTTGTTTCCAGGAACAACCCCAAGTACTGTTTCGAACAGCGAGTGGTGGGAAGAAACTGACAAGAAATTCCAAGCATGGCCTCGTACTGCTGGTCCACCTGTGGTGATGAACCCGATCAGTCGCCAGAATTTCATCGTCAAAACCCGCCCTGAAGCTTAAATGTTACTTTAGTTGTGAATCTTTACACTTTTGATTGGATGGATCATTCTGGTTTGAAACAACTGCCTAGTCATTAAGCAGTTCTAATCTGCCTAGCCTTCATGTTTTGAGTTGGGAACTTGAAGCAATTCTTGTTGTTCTGATAGTCATTCTTATTTCCTCTTTAAAAGTTGCATCGTTGGTTTGTTATGATGATGATGTCATGATGTTGAATCTTAAATAATGCAGTGGAAAATTTCCCACCTCCTTCAGACAACGAAGAATCACCATCTTTCTTATTTACTTTGATTTATGAGATCCCCAAGTTCTTCATAGGTGTCTGGTTTGCTTGTTTATGATTTCTTTGTTGCTGTAATTTTTGGGT TCTTTAAGAAAAACAAAAGTCAGCCCACTTTGTAAAATAAAATAAAAACAATTTATGGATGTACAGACCGACCGAACCGAACCGGTTCGGTTCGATTTTAACCTAACCAATTCAGGAGTGGGTATCCCGAAGTCTCACACGCGTCTTTCTTAACACGCGAAGTTTCTCTCTGCTCTTCCAATTTGCCTCTCTCTCTCTCCCGCCTTCCTCACCGCCGCCCGCAGCCCTTCTCCCATCGACGTCGGTCCCTTTTCAGGCGACATTAAATCAGTTAGACGATGGCAGCGAAGTACGTGACAGCTTCTCTAGTCGGAACATTTGCAATTGCGTATATTGCTGATTACCTTGTTTCTGACAAGAAAATATTTGGAGGAACAACCCCAAGTACTGTTTCGAACAGCGAGTGGTGGGAAGAAACTGACAAGAAATTCCAAGCATGGCCTCGTACTGCTGGTCCACCTGTGGTGATGAACCCGATCAGTCGCCAGAATTTCATCGTCAAAACCCGCCCTGAAGCTTAAATGTTACTTTAGTTGTGAATCTTTACACTTTTGATTGGATGGATCATTCTGGTTTGAAACAACTGCCTAGTCATTAAGCAGTTCTAATCTGCCTAGCCTTCATGTTTTGAGTTGGGAACTTGAAGCAATTCTTGTTGTTCTGATAGTCATTCTTATTTCCTCTTTAAAAGTTGCATCGTTGGTTTGTTATGATGATGATGTCATGATGTTGAATCTTAAATAATGCAGTGGAAAATTTCCCACCTCCTTCAGACAACGAAGAATCACCATCTTTCTTATTTACTTTGATTTATGAGATCCCCAAGTTCTTCATAGGTGTCTGGTTTGCTTGTTTATGATTTCTTTGTTGCTGTAATTTTTGGGT ATGGCAGCGAAGTACGTGACAGCTTCTCTAGTCGGAACATTTGCAATTGCGTATATTGCTGATTACCTTGTTTCTGACAAGAAAATATTTGGAGGAACAACCCCAAGTACTGTTTCGAACAGCGAGTGGTGGGAAGAAACTGACAAGAAATTCCAAGCATGGCCTCGTACTGCTGGTCCACCTGTGGTGATGAACCCGATCAGTCGCCAGAATTTCATCGTCAAAACCCGCCCTGAAGCTTAA MAAKYVTASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVKTRPEA
BLAST of Cp4.1LG19g00620 vs. TrEMBL
Match: A0A0A0KYC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G166930 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 7.6e-32 Identity = 67/80 (83.75%), Postives = 73/80 (91.25%), Query Frame = 1
BLAST of Cp4.1LG19g00620 vs. TrEMBL
Match: A0A0D2NRU0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G230600 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 6.4e-31 Identity = 66/80 (82.50%), Postives = 72/80 (90.00%), Query Frame = 1
BLAST of Cp4.1LG19g00620 vs. TrEMBL
Match: A9P9Z0_POPTR (Stress-related ozone-induced family protein OS=Populus trichocarpa GN=POPTR_0006s05040g PE=2 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 3.2e-30 Identity = 61/77 (79.22%), Postives = 71/77 (92.21%), Query Frame = 1
BLAST of Cp4.1LG19g00620 vs. TrEMBL
Match: A0A061EWV8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024708 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 5.4e-30 Identity = 62/80 (77.50%), Postives = 71/80 (88.75%), Query Frame = 1
BLAST of Cp4.1LG19g00620 vs. TrEMBL
Match: A0A0B0PHX2_GOSAR (Nucleolar 12 OS=Gossypium arboreum GN=F383_30394 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 7.1e-30 Identity = 64/80 (80.00%), Postives = 71/80 (88.75%), Query Frame = 1
BLAST of Cp4.1LG19g00620 vs. TAIR10
Match: AT1G01170.1 (AT1G01170.1 Protein of unknown function (DUF1138)) HSP 1 Score: 132.9 bits (333), Expect = 8.9e-32 Identity = 59/77 (76.62%), Postives = 67/77 (87.01%), Query Frame = 1
BLAST of Cp4.1LG19g00620 vs. TAIR10
Match: AT4G00860.1 (AT4G00860.1 Protein of unknown function (DUF1138)) HSP 1 Score: 111.3 bits (277), Expect = 2.8e-25 Identity = 47/77 (61.04%), Postives = 61/77 (79.22%), Query Frame = 1
BLAST of Cp4.1LG19g00620 vs. NCBI nr
Match: gi|449463344|ref|XP_004149394.1| (PREDICTED: uncharacterized protein LOC101213065 [Cucumis sativus]) HSP 1 Score: 144.1 bits (362), Expect = 1.1e-31 Identity = 67/80 (83.75%), Postives = 73/80 (91.25%), Query Frame = 1
BLAST of Cp4.1LG19g00620 vs. NCBI nr
Match: gi|659134221|ref|XP_008467091.1| (PREDICTED: uncharacterized protein LOC103504527 [Cucumis melo]) HSP 1 Score: 144.1 bits (362), Expect = 1.1e-31 Identity = 66/77 (85.71%), Postives = 72/77 (93.51%), Query Frame = 1
BLAST of Cp4.1LG19g00620 vs. NCBI nr
Match: gi|823136581|ref|XP_012468054.1| (PREDICTED: uncharacterized protein LOC105786244 [Gossypium raimondii]) HSP 1 Score: 141.0 bits (354), Expect = 9.2e-31 Identity = 66/80 (82.50%), Postives = 72/80 (90.00%), Query Frame = 1
BLAST of Cp4.1LG19g00620 vs. NCBI nr
Match: gi|566174546|ref|XP_002308950.2| (stress-related ozone-induced family protein [Populus trichocarpa]) HSP 1 Score: 138.7 bits (348), Expect = 4.6e-30 Identity = 61/77 (79.22%), Postives = 71/77 (92.21%), Query Frame = 1
BLAST of Cp4.1LG19g00620 vs. NCBI nr
Match: gi|590636108|ref|XP_007028779.1| (Uncharacterized protein TCM_024708 [Theobroma cacao]) HSP 1 Score: 137.9 bits (346), Expect = 7.8e-30 Identity = 62/80 (77.50%), Postives = 71/80 (88.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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