CmaCh07G013220 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTTTTCAGGCGACATAAATCAGGTACTGATGAAGAATAGTCCGGGAGGAATTTTCAGATCTGATTTTTCTTTTCGCAATCCCCTTCTATTTTCTCTTCCTTATTTATTATATCTTCTAATTTTCTTTTTTGTGTTTGTTTGTTTTTGATTTTCTTCGATCCATTTTTGTTCTGTTATGAGCTTTAGATTTTCTGTATGGCAAGGTGAAGAAAAGAGACCCCTTTTTTGTCGATCTATTCGTGTTTTCTTGTTCTATTTTCACATTATTTGTATGATTTTTTTTTTTTTTTTTAATACGAGTATCTGTATTTTTTTCACTTATCTTAGATCACGATTCTGAAACAACCGTCTTCAATTTCATTCTAAAGATAAATAGAATTTACTAAGAGGTTCTTAGTAATCCCCAATCTCAGGCTAAATGTATTTGATTCTTAGCTGTTGGGATTTATTCTGATTCAACTCAATCTTACGGGTATCGTTTGCTATTTTTCTACATTGGCAAACTTTTATTCAGATTTTTTATTCCTTCGTTCTTCCTGTTTGTGATCTTTTGTGGATTTTCCCTTTTGATTATTAGGGAGGAGAGATATGAAGGTGAACCACAGATTTTTTAGTGCTTCTAAATTGAAAACAGATGGTTGAGACTGATATTAATCTTTCACAAAAGAGAGAAGAAAAGAGTATTGGTTGGGTATGTGTATCATGTCATTTGAATTAAGAAGGTAGTTGGTTTGGAATAAAGTCTTAGAATAAAAATCTTTGAGTGGTTTTAGGGTTTTTATTGGGATTTGATAATTTTGGATGAGAGCGAAGAGAGTAGATGGAAGCAGAAACTCAGAAGTCTCTGCAATTAGGGAGTTCATTTCCTTGTCAAGTTTGTGTTGTGGGTTTCCTCTGTGGAGTTTGTATTGCTTCTCTGTTTCTTGGTGCTTTTACTTTATTTGGTGTCCCTTTGGAATTTGCTTGGAGTTTTTTCTCACCCAATTCAATGTATGCTTCACTTTGGAATTCAACTTCTGAAAATATTAGTAAAAGTTGTCATCATCATAGGAACTATTAAGCTTCAGTCATACTATTTTTCATCCAGTTATTGTTTATGTTTCTGTTTCTTTTTTTCTAAACATAAATAGTTACGGTCATGCTATGAAAAAACCTCATTATGACGTTCTTTTGAAATCTAAGAAAAGAAAGAAATCAAAGAGTATTCTCGGAGGTGTCAAAGCTTTTCAATGATGTTGTTTACCGCGCTATATCTTGTTGTAAATTGTCTAATACTTTTGTTTCCTGGAGGTCACCTCCCTTGTAGTAAATTGGGAAGGTTCTTTCTATAATTATTATGGGCAACACATGCCGTTCGTAAATGAAATCGAGAAACAGGAAATTAGAAACAAAAATGTTATCTATTGGGGCCTTAACTTAATAAAGTAGATAGATGTAGCTGGTGGAGTTTGGTGCAGTTCGATCTAATCCTGCGTATAATATGGTTCATTTGACTTGGGAACGTATCGATCCATTACAGTTAGACGATGGCAGCAAAGTACGTGGCAGCTTCTCTAGTCGGAACATTTGCAATTGCGTATATTGCTGATTACCTTGTTTCTGACAAGAAAATATTTGGAGGTAATGATAGTTTCTTTGGACTTCGGCCATTGCTTGGCTTTCAGTTTCTTTGATGTGCTACCATTGCTCTGTTGTGTTGATTTAATTTGTTTTCAGGAACAACCCCAAGTACTGTTTCGAACAGCGAGTGGTGGGAAGAAACTGACAAGAAATTCCAAGCATGGCCTCGTACTGCCGGTCCACCTGTGGTGATGAACCCAATCAGTCGCCAGAATTTCATCGTCAAAACCCGCTCTGAAGCTTAAATGTTACATTAGTTGTGAATCTATACACTTTTGATTGGATGGATCATTCTGCTATGAAACTACTGCCTAGTCATTAAGCAGTTCTAATCTGCCTTGCCTTCATGTTTTGAGTCGGGAACTTGAAGCAATTCTTGTTGTTCTGATAGTCATTCTTATTCCTCTTTAAAAGTTGCATCGTTGGTTTGTTATGATGATGATGTCATGATGTTGAATCTTAAATAATGCAGTGGAAAATTTCCCACCTCCTTCAGACAACGAACAATCATCATCTTTCTTATTTACTTCGATTTATGAGATCTCCAAGTTCTTCATAGGTGTCTGGTTTGCTTGTTTATGATTTCTTTGTTGCTGTAATTTAGGGTTCATAGTTCAATTT CCTTTTCAGGCGACATAAATCAGGTACTGATGAAGAATAGTCCGGGAGGAATTTTCAGATCTGATTTTTCTTTTCGCAATCCCCTTCTATTTTCTCTTCCTTATTTATTATATCTTCTAATTTTCTTTTTTGTGTTTGTTTGTTTTTGATTTTCTTCGATCCATTTTTGTTCTGTTATGAGCTTTAGATTTTCTGTATGGCAAGGTGAAGAAAAGAGACCCCTTTTTTGTCGATCTATTCGTGTTTTCTTGTTCTATTTTCACATTATTTGTATGATTTTTTTTTTTTTTTTTAATACGAGTATCTGTATTTTTTTCACTTATCTTAGATCACGATTCTGAAACAACCGTCTTCAATTTCATTCTAAAGATAAATAGAATTTACTAAGAGGTTCTTAGTAATCCCCAATCTCAGGCTAAATGTATTTGATTCTTAGCTGTTGGGATTTATTCTGATTCAACTCAATCTTACGGGTATCGTTTGCTATTTTTCTACATTGGCAAACTTTTATTCAGATTTTTTATTCCTTCGTTCTTCCTGTTTGTGATCTTTTGTGGATTTTCCCTTTTGATTATTAGGGAGGAGAGATATGAAGGTGAACCACAGATTTTTTAGTGCTTCTAAATTGAAAACAGATGGTTGAGACTGATATTAATCTTTCACAAAAGAGAGAAGAAAAGAGTATTGGTTGGTTAGACGATGGCAGCAAAGTACGTGGCAGCTTCTCTAGTCGGAACATTTGCAATTGCGTATATTGCTGATTACCTTGTTTCTGACAAGAAAATATTTGGAGGAACAACCCCAAGTACTGTTTCGAACAGCGAGTGGTGGGAAGAAACTGACAAGAAATTCCAAGCATGGCCTCGTACTGCCGGTCCACCTGTGGTGATGAACCCAATCAGTCGCCAGAATTTCATCGTCAAAACCCGCTCTGAAGCTTAAATGTTACATTAGTTGTGAATCTATACACTTTTGATTGGATGGATCATTCTGCTATGAAACTACTGCCTAGTCATTAAGCAGTTCTAATCTGCCTTGCCTTCATGTTTTGAGTCGGGAACTTGAAGCAATTCTTGTTGTTCTGATAGTCATTCTTATTCCTCTTTAAAAGTTGCATCGTTGGTTTGTTATGATGATGATGTCATGATGTTGAATCTTAAATAATGCAGTGGAAAATTTCCCACCTCCTTCAGACAACGAACAATCATCATCTTTCTTATTTACTTCGATTTATGAGATCTCCAAGTTCTTCATAGGTGTCTGGTTTGCTTGTTTATGATTTCTTTGTTGCTGTAATTTAGGGTTCATAGTTCAATTT ATGGCAGCAAAGTACGTGGCAGCTTCTCTAGTCGGAACATTTGCAATTGCGTATATTGCTGATTACCTTGTTTCTGACAAGAAAATATTTGGAGGAACAACCCCAAGTACTGTTTCGAACAGCGAGTGGTGGGAAGAAACTGACAAGAAATTCCAAGCATGGCCTCGTACTGCCGGTCCACCTGTGGTGATGAACCCAATCAGTCGCCAGAATTTCATCGTCAAAACCCGCTCTGAAGCTTAA MAAKYVAASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVKTRSEA
BLAST of CmaCh07G013220 vs. TrEMBL
Match: A0A0D2NRU0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G230600 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 2.2e-31 Identity = 67/80 (83.75%), Postives = 73/80 (91.25%), Query Frame = 1
BLAST of CmaCh07G013220 vs. TrEMBL
Match: A0A0A0KYC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G166930 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 8.4e-31 Identity = 66/80 (82.50%), Postives = 72/80 (90.00%), Query Frame = 1
BLAST of CmaCh07G013220 vs. TrEMBL
Match: A0A061EWV8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024708 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 1.9e-30 Identity = 63/80 (78.75%), Postives = 72/80 (90.00%), Query Frame = 1
BLAST of CmaCh07G013220 vs. TrEMBL
Match: A0A0B0PHX2_GOSAR (Nucleolar 12 OS=Gossypium arboreum GN=F383_30394 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 2.4e-30 Identity = 65/80 (81.25%), Postives = 72/80 (90.00%), Query Frame = 1
BLAST of CmaCh07G013220 vs. TrEMBL
Match: A9P9Z0_POPTR (Stress-related ozone-induced family protein OS=Populus trichocarpa GN=POPTR_0006s05040g PE=2 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 4.2e-30 Identity = 61/77 (79.22%), Postives = 71/77 (92.21%), Query Frame = 1
BLAST of CmaCh07G013220 vs. TAIR10
Match: AT1G01170.1 (AT1G01170.1 Protein of unknown function (DUF1138)) HSP 1 Score: 129.4 bits (324), Expect = 9.8e-31 Identity = 58/77 (75.32%), Postives = 66/77 (85.71%), Query Frame = 1
BLAST of CmaCh07G013220 vs. TAIR10
Match: AT4G00860.1 (AT4G00860.1 Protein of unknown function (DUF1138)) HSP 1 Score: 107.8 bits (268), Expect = 3.1e-24 Identity = 46/77 (59.74%), Postives = 60/77 (77.92%), Query Frame = 1
BLAST of CmaCh07G013220 vs. NCBI nr
Match: gi|659134221|ref|XP_008467091.1| (PREDICTED: uncharacterized protein LOC103504527 [Cucumis melo]) HSP 1 Score: 143.7 bits (361), Expect = 1.4e-31 Identity = 66/77 (85.71%), Postives = 72/77 (93.51%), Query Frame = 1
BLAST of CmaCh07G013220 vs. NCBI nr
Match: gi|823136581|ref|XP_012468054.1| (PREDICTED: uncharacterized protein LOC105786244 [Gossypium raimondii]) HSP 1 Score: 142.5 bits (358), Expect = 3.2e-31 Identity = 67/80 (83.75%), Postives = 73/80 (91.25%), Query Frame = 1
BLAST of CmaCh07G013220 vs. NCBI nr
Match: gi|449463344|ref|XP_004149394.1| (PREDICTED: uncharacterized protein LOC101213065 [Cucumis sativus]) HSP 1 Score: 140.6 bits (353), Expect = 1.2e-30 Identity = 66/80 (82.50%), Postives = 72/80 (90.00%), Query Frame = 1
BLAST of CmaCh07G013220 vs. NCBI nr
Match: gi|590636108|ref|XP_007028779.1| (Uncharacterized protein TCM_024708 [Theobroma cacao]) HSP 1 Score: 139.4 bits (350), Expect = 2.7e-30 Identity = 63/80 (78.75%), Postives = 72/80 (90.00%), Query Frame = 1
BLAST of CmaCh07G013220 vs. NCBI nr
Match: gi|728845132|gb|KHG24575.1| (Nucleolar 12 [Gossypium arboreum]) HSP 1 Score: 139.0 bits (349), Expect = 3.5e-30 Identity = 65/80 (81.25%), Postives = 72/80 (90.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|