CmaCh07G013220 (gene) Cucurbita maxima (Rimu)

NameCmaCh07G013220
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionOzone-responsive stress related protein
LocationCma_Chr07 : 7487180 .. 7489421 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTTTTCAGGCGACATAAATCAGGTACTGATGAAGAATAGTCCGGGAGGAATTTTCAGATCTGATTTTTCTTTTCGCAATCCCCTTCTATTTTCTCTTCCTTATTTATTATATCTTCTAATTTTCTTTTTTGTGTTTGTTTGTTTTTGATTTTCTTCGATCCATTTTTGTTCTGTTATGAGCTTTAGATTTTCTGTATGGCAAGGTGAAGAAAAGAGACCCCTTTTTTGTCGATCTATTCGTGTTTTCTTGTTCTATTTTCACATTATTTGTATGATTTTTTTTTTTTTTTTTAATACGAGTATCTGTATTTTTTTCACTTATCTTAGATCACGATTCTGAAACAACCGTCTTCAATTTCATTCTAAAGATAAATAGAATTTACTAAGAGGTTCTTAGTAATCCCCAATCTCAGGCTAAATGTATTTGATTCTTAGCTGTTGGGATTTATTCTGATTCAACTCAATCTTACGGGTATCGTTTGCTATTTTTCTACATTGGCAAACTTTTATTCAGATTTTTTATTCCTTCGTTCTTCCTGTTTGTGATCTTTTGTGGATTTTCCCTTTTGATTATTAGGGAGGAGAGATATGAAGGTGAACCACAGATTTTTTAGTGCTTCTAAATTGAAAACAGATGGTTGAGACTGATATTAATCTTTCACAAAAGAGAGAAGAAAAGAGTATTGGTTGGGTATGTGTATCATGTCATTTGAATTAAGAAGGTAGTTGGTTTGGAATAAAGTCTTAGAATAAAAATCTTTGAGTGGTTTTAGGGTTTTTATTGGGATTTGATAATTTTGGATGAGAGCGAAGAGAGTAGATGGAAGCAGAAACTCAGAAGTCTCTGCAATTAGGGAGTTCATTTCCTTGTCAAGTTTGTGTTGTGGGTTTCCTCTGTGGAGTTTGTATTGCTTCTCTGTTTCTTGGTGCTTTTACTTTATTTGGTGTCCCTTTGGAATTTGCTTGGAGTTTTTTCTCACCCAATTCAATGTATGCTTCACTTTGGAATTCAACTTCTGAAAATATTAGTAAAAGTTGTCATCATCATAGGAACTATTAAGCTTCAGTCATACTATTTTTCATCCAGTTATTGTTTATGTTTCTGTTTCTTTTTTTCTAAACATAAATAGTTACGGTCATGCTATGAAAAAACCTCATTATGACGTTCTTTTGAAATCTAAGAAAAGAAAGAAATCAAAGAGTATTCTCGGAGGTGTCAAAGCTTTTCAATGATGTTGTTTACCGCGCTATATCTTGTTGTAAATTGTCTAATACTTTTGTTTCCTGGAGGTCACCTCCCTTGTAGTAAATTGGGAAGGTTCTTTCTATAATTATTATGGGCAACACATGCCGTTCGTAAATGAAATCGAGAAACAGGAAATTAGAAACAAAAATGTTATCTATTGGGGCCTTAACTTAATAAAGTAGATAGATGTAGCTGGTGGAGTTTGGTGCAGTTCGATCTAATCCTGCGTATAATATGGTTCATTTGACTTGGGAACGTATCGATCCATTACAGTTAGACGATGGCAGCAAAGTACGTGGCAGCTTCTCTAGTCGGAACATTTGCAATTGCGTATATTGCTGATTACCTTGTTTCTGACAAGAAAATATTTGGAGGTAATGATAGTTTCTTTGGACTTCGGCCATTGCTTGGCTTTCAGTTTCTTTGATGTGCTACCATTGCTCTGTTGTGTTGATTTAATTTGTTTTCAGGAACAACCCCAAGTACTGTTTCGAACAGCGAGTGGTGGGAAGAAACTGACAAGAAATTCCAAGCATGGCCTCGTACTGCCGGTCCACCTGTGGTGATGAACCCAATCAGTCGCCAGAATTTCATCGTCAAAACCCGCTCTGAAGCTTAAATGTTACATTAGTTGTGAATCTATACACTTTTGATTGGATGGATCATTCTGCTATGAAACTACTGCCTAGTCATTAAGCAGTTCTAATCTGCCTTGCCTTCATGTTTTGAGTCGGGAACTTGAAGCAATTCTTGTTGTTCTGATAGTCATTCTTATTCCTCTTTAAAAGTTGCATCGTTGGTTTGTTATGATGATGATGTCATGATGTTGAATCTTAAATAATGCAGTGGAAAATTTCCCACCTCCTTCAGACAACGAACAATCATCATCTTTCTTATTTACTTCGATTTATGAGATCTCCAAGTTCTTCATAGGTGTCTGGTTTGCTTGTTTATGATTTCTTTGTTGCTGTAATTTAGGGTTCATAGTTCAATTT

mRNA sequence

CCTTTTCAGGCGACATAAATCAGGTACTGATGAAGAATAGTCCGGGAGGAATTTTCAGATCTGATTTTTCTTTTCGCAATCCCCTTCTATTTTCTCTTCCTTATTTATTATATCTTCTAATTTTCTTTTTTGTGTTTGTTTGTTTTTGATTTTCTTCGATCCATTTTTGTTCTGTTATGAGCTTTAGATTTTCTGTATGGCAAGGTGAAGAAAAGAGACCCCTTTTTTGTCGATCTATTCGTGTTTTCTTGTTCTATTTTCACATTATTTGTATGATTTTTTTTTTTTTTTTTAATACGAGTATCTGTATTTTTTTCACTTATCTTAGATCACGATTCTGAAACAACCGTCTTCAATTTCATTCTAAAGATAAATAGAATTTACTAAGAGGTTCTTAGTAATCCCCAATCTCAGGCTAAATGTATTTGATTCTTAGCTGTTGGGATTTATTCTGATTCAACTCAATCTTACGGGTATCGTTTGCTATTTTTCTACATTGGCAAACTTTTATTCAGATTTTTTATTCCTTCGTTCTTCCTGTTTGTGATCTTTTGTGGATTTTCCCTTTTGATTATTAGGGAGGAGAGATATGAAGGTGAACCACAGATTTTTTAGTGCTTCTAAATTGAAAACAGATGGTTGAGACTGATATTAATCTTTCACAAAAGAGAGAAGAAAAGAGTATTGGTTGGTTAGACGATGGCAGCAAAGTACGTGGCAGCTTCTCTAGTCGGAACATTTGCAATTGCGTATATTGCTGATTACCTTGTTTCTGACAAGAAAATATTTGGAGGAACAACCCCAAGTACTGTTTCGAACAGCGAGTGGTGGGAAGAAACTGACAAGAAATTCCAAGCATGGCCTCGTACTGCCGGTCCACCTGTGGTGATGAACCCAATCAGTCGCCAGAATTTCATCGTCAAAACCCGCTCTGAAGCTTAAATGTTACATTAGTTGTGAATCTATACACTTTTGATTGGATGGATCATTCTGCTATGAAACTACTGCCTAGTCATTAAGCAGTTCTAATCTGCCTTGCCTTCATGTTTTGAGTCGGGAACTTGAAGCAATTCTTGTTGTTCTGATAGTCATTCTTATTCCTCTTTAAAAGTTGCATCGTTGGTTTGTTATGATGATGATGTCATGATGTTGAATCTTAAATAATGCAGTGGAAAATTTCCCACCTCCTTCAGACAACGAACAATCATCATCTTTCTTATTTACTTCGATTTATGAGATCTCCAAGTTCTTCATAGGTGTCTGGTTTGCTTGTTTATGATTTCTTTGTTGCTGTAATTTAGGGTTCATAGTTCAATTT

Coding sequence (CDS)

ATGGCAGCAAAGTACGTGGCAGCTTCTCTAGTCGGAACATTTGCAATTGCGTATATTGCTGATTACCTTGTTTCTGACAAGAAAATATTTGGAGGAACAACCCCAAGTACTGTTTCGAACAGCGAGTGGTGGGAAGAAACTGACAAGAAATTCCAAGCATGGCCTCGTACTGCCGGTCCACCTGTGGTGATGAACCCAATCAGTCGCCAGAATTTCATCGTCAAAACCCGCTCTGAAGCTTAA

Protein sequence

MAAKYVAASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVKTRSEA
BLAST of CmaCh07G013220 vs. TrEMBL
Match: A0A0D2NRU0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G230600 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.2e-31
Identity = 67/80 (83.75%), Postives = 73/80 (91.25%), Query Frame = 1

Query: 1  MAAKYVAASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60
          MAAKY+ ASL G+FAIAY++D LVSD KIFGGTTPSTVSN  WWEETDKKFQAWPRTAGP
Sbjct: 1  MAAKYIIASLAGSFAIAYVSDLLVSDSKIFGGTTPSTVSNKGWWEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRSEA 81
          PVVMNPISRQNFIVK+ SE+
Sbjct: 61 PVVMNPISRQNFIVKSGSES 80

BLAST of CmaCh07G013220 vs. TrEMBL
Match: A0A0A0KYC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G166930 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 8.4e-31
Identity = 66/80 (82.50%), Postives = 72/80 (90.00%), Query Frame = 1

Query: 1  MAAKYVAASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60
          MAAKY+  SL+G   +AYI D+L+SDKKIFGGTTPSTVSNSEW EETDKKFQAWPRTAGP
Sbjct: 1  MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRSEA 81
          PVVMNPISRQNFIVKTR E+
Sbjct: 61 PVVMNPISRQNFIVKTRPES 80

BLAST of CmaCh07G013220 vs. TrEMBL
Match: A0A061EWV8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024708 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.9e-30
Identity = 63/80 (78.75%), Postives = 72/80 (90.00%), Query Frame = 1

Query: 1  MAAKYVAASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60
          MA KY+  +++G+FAIAY+ D L++DKKIFGGTTPSTVSN EWWEETDKKFQAWPRTAGP
Sbjct: 1  MATKYIIPAVLGSFAIAYVCDQLIADKKIFGGTTPSTVSNKEWWEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRSEA 81
          PVVMNPISRQNFIVK  SE+
Sbjct: 61 PVVMNPISRQNFIVKAGSES 80

BLAST of CmaCh07G013220 vs. TrEMBL
Match: A0A0B0PHX2_GOSAR (Nucleolar 12 OS=Gossypium arboreum GN=F383_30394 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.4e-30
Identity = 65/80 (81.25%), Postives = 72/80 (90.00%), Query Frame = 1

Query: 1  MAAKYVAASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60
          MAAKY+ AS+ G+FAIAY++D LVSD KIFGGTTPSTVSN  WWEETDKKFQAWPR AGP
Sbjct: 1  MAAKYIIASVAGSFAIAYVSDLLVSDSKIFGGTTPSTVSNKGWWEETDKKFQAWPRKAGP 60

Query: 61 PVVMNPISRQNFIVKTRSEA 81
          PVVMNPISRQNFIVK+ SE+
Sbjct: 61 PVVMNPISRQNFIVKSGSES 80

BLAST of CmaCh07G013220 vs. TrEMBL
Match: A9P9Z0_POPTR (Stress-related ozone-induced family protein OS=Populus trichocarpa GN=POPTR_0006s05040g PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 4.2e-30
Identity = 61/77 (79.22%), Postives = 71/77 (92.21%), Query Frame = 1

Query: 1  MAAKYVAASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60
          M+ KY+ ++LVG+FAIAY+ DY+VSDKKIFGGTTP TVSN EWWEETDKKFQAWPRT GP
Sbjct: 1  MSTKYIVSALVGSFAIAYVCDYVVSDKKIFGGTTPRTVSNKEWWEETDKKFQAWPRTGGP 60

Query: 61 PVVMNPISRQNFIVKTR 78
          PVVMNPI+RQNFIVK++
Sbjct: 61 PVVMNPITRQNFIVKSQ 77

BLAST of CmaCh07G013220 vs. TAIR10
Match: AT1G01170.1 (AT1G01170.1 Protein of unknown function (DUF1138))

HSP 1 Score: 129.4 bits (324), Expect = 9.8e-31
Identity = 58/77 (75.32%), Postives = 66/77 (85.71%), Query Frame = 1

Query: 3  AKYVAASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPV 62
          AKY+  +L+G+F I+YI D ++SD KIFGGTTP TVSN EWW  TD+KFQAWPRTAGPPV
Sbjct: 7  AKYIIGALIGSFGISYIFDKVISDNKIFGGTTPGTVSNKEWWAATDEKFQAWPRTAGPPV 66

Query: 63 VMNPISRQNFIVKTRSE 80
          VMNPISRQNFIVKTR E
Sbjct: 67 VMNPISRQNFIVKTRPE 83

BLAST of CmaCh07G013220 vs. TAIR10
Match: AT4G00860.1 (AT4G00860.1 Protein of unknown function (DUF1138))

HSP 1 Score: 107.8 bits (268), Expect = 3.1e-24
Identity = 46/77 (59.74%), Postives = 60/77 (77.92%), Query Frame = 1

Query: 3  AKYVAASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGPPV 62
          A Y+  +L G+  +AY+ D ++SD K+FGGTTP T++N EW   T+++ QAWPR AGPPV
Sbjct: 4  ATYIIGALAGSAVVAYVCDKVISDDKLFGGTTPGTITNKEWGAATEERLQAWPRVAGPPV 63

Query: 63 VMNPISRQNFIVKTRSE 80
          VMNPISRQNFIVK+R E
Sbjct: 64 VMNPISRQNFIVKSRPE 80

BLAST of CmaCh07G013220 vs. NCBI nr
Match: gi|659134221|ref|XP_008467091.1| (PREDICTED: uncharacterized protein LOC103504527 [Cucumis melo])

HSP 1 Score: 143.7 bits (361), Expect = 1.4e-31
Identity = 66/77 (85.71%), Postives = 72/77 (93.51%), Query Frame = 1

Query: 1  MAAKYVAASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60
          MAAKY+  SL+G  A+AYI D+L+SDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP
Sbjct: 1  MAAKYIVGSLLGATAVAYIGDHLISDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTR 78
          PVVMNPISRQNFIVK+R
Sbjct: 61 PVVMNPISRQNFIVKSR 77

BLAST of CmaCh07G013220 vs. NCBI nr
Match: gi|823136581|ref|XP_012468054.1| (PREDICTED: uncharacterized protein LOC105786244 [Gossypium raimondii])

HSP 1 Score: 142.5 bits (358), Expect = 3.2e-31
Identity = 67/80 (83.75%), Postives = 73/80 (91.25%), Query Frame = 1

Query: 1  MAAKYVAASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60
          MAAKY+ ASL G+FAIAY++D LVSD KIFGGTTPSTVSN  WWEETDKKFQAWPRTAGP
Sbjct: 1  MAAKYIIASLAGSFAIAYVSDLLVSDSKIFGGTTPSTVSNKGWWEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRSEA 81
          PVVMNPISRQNFIVK+ SE+
Sbjct: 61 PVVMNPISRQNFIVKSGSES 80

BLAST of CmaCh07G013220 vs. NCBI nr
Match: gi|449463344|ref|XP_004149394.1| (PREDICTED: uncharacterized protein LOC101213065 [Cucumis sativus])

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-30
Identity = 66/80 (82.50%), Postives = 72/80 (90.00%), Query Frame = 1

Query: 1  MAAKYVAASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60
          MAAKY+  SL+G   +AYI D+L+SDKKIFGGTTPSTVSNSEW EETDKKFQAWPRTAGP
Sbjct: 1  MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRSEA 81
          PVVMNPISRQNFIVKTR E+
Sbjct: 61 PVVMNPISRQNFIVKTRPES 80

BLAST of CmaCh07G013220 vs. NCBI nr
Match: gi|590636108|ref|XP_007028779.1| (Uncharacterized protein TCM_024708 [Theobroma cacao])

HSP 1 Score: 139.4 bits (350), Expect = 2.7e-30
Identity = 63/80 (78.75%), Postives = 72/80 (90.00%), Query Frame = 1

Query: 1  MAAKYVAASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60
          MA KY+  +++G+FAIAY+ D L++DKKIFGGTTPSTVSN EWWEETDKKFQAWPRTAGP
Sbjct: 1  MATKYIIPAVLGSFAIAYVCDQLIADKKIFGGTTPSTVSNKEWWEETDKKFQAWPRTAGP 60

Query: 61 PVVMNPISRQNFIVKTRSEA 81
          PVVMNPISRQNFIVK  SE+
Sbjct: 61 PVVMNPISRQNFIVKAGSES 80

BLAST of CmaCh07G013220 vs. NCBI nr
Match: gi|728845132|gb|KHG24575.1| (Nucleolar 12 [Gossypium arboreum])

HSP 1 Score: 139.0 bits (349), Expect = 3.5e-30
Identity = 65/80 (81.25%), Postives = 72/80 (90.00%), Query Frame = 1

Query: 1  MAAKYVAASLVGTFAIAYIADYLVSDKKIFGGTTPSTVSNSEWWEETDKKFQAWPRTAGP 60
          MAAKY+ AS+ G+FAIAY++D LVSD KIFGGTTPSTVSN  WWEETDKKFQAWPR AGP
Sbjct: 1  MAAKYIIASVAGSFAIAYVSDLLVSDSKIFGGTTPSTVSNKGWWEETDKKFQAWPRKAGP 60

Query: 61 PVVMNPISRQNFIVKTRSEA 81
          PVVMNPISRQNFIVK+ SE+
Sbjct: 61 PVVMNPISRQNFIVKSGSES 80

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0D2NRU0_GOSRA2.2e-3183.75Uncharacterized protein OS=Gossypium raimondii GN=B456_002G230600 PE=4 SV=1[more]
A0A0A0KYC7_CUCSA8.4e-3182.50Uncharacterized protein OS=Cucumis sativus GN=Csa_4G166930 PE=4 SV=1[more]
A0A061EWV8_THECC1.9e-3078.75Uncharacterized protein OS=Theobroma cacao GN=TCM_024708 PE=4 SV=1[more]
A0A0B0PHX2_GOSAR2.4e-3081.25Nucleolar 12 OS=Gossypium arboreum GN=F383_30394 PE=4 SV=1[more]
A9P9Z0_POPTR4.2e-3079.22Stress-related ozone-induced family protein OS=Populus trichocarpa GN=POPTR_0006... [more]
Match NameE-valueIdentityDescription
AT1G01170.19.8e-3175.32 Protein of unknown function (DUF1138)[more]
AT4G00860.13.1e-2459.74 Protein of unknown function (DUF1138)[more]
Match NameE-valueIdentityDescription
gi|659134221|ref|XP_008467091.1|1.4e-3185.71PREDICTED: uncharacterized protein LOC103504527 [Cucumis melo][more]
gi|823136581|ref|XP_012468054.1|3.2e-3183.75PREDICTED: uncharacterized protein LOC105786244 [Gossypium raimondii][more]
gi|449463344|ref|XP_004149394.1|1.2e-3082.50PREDICTED: uncharacterized protein LOC101213065 [Cucumis sativus][more]
gi|590636108|ref|XP_007028779.1|2.7e-3078.75Uncharacterized protein TCM_024708 [Theobroma cacao][more]
gi|728845132|gb|KHG24575.1|3.5e-3081.25Nucleolar 12 [Gossypium arboreum][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009515DUF1138
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh07G013220.1CmaCh07G013220.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009515Protein of unknown function DUF1138PFAMPF06592DUF1138coord: 3..75
score: 5.7
NoneNo IPR availablePANTHERPTHR34267FAMILY NOT NAMEDcoord: 2..79
score: 1.1
NoneNo IPR availablePANTHERPTHR34267:SF1AT0ZI1 PROTEINcoord: 2..79
score: 1.1

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh07G013220CmaCh03G000690Cucurbita maxima (Rimu)cmacmaB530