Cp4.1LG18g08810 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG18g08810
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionEF hand calcium-binding family protein
LocationCp4.1LG18 : 8072249 .. 8072674 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATCAACAATTCGGCACAGTACGGTCGTGTGTTGAGTTACTTCGACGAAGATGGAGACGGCAAGATCTCGCCGTCGGAGCTGAGGAATCGGGTCGGATTGATGGGCGGAGAGCTGCTGCTGGGGGAGGCGGAGATGGCGGTGCAGTCGCTCGACTCGGACGGCGATGGGTTGCTGTGCGCGGGCGATTTCGAACGGCTTCTGGACGTGGGGGAGGAGGAGAAATTGAATGATTTGAAAGAGGCGTTTGGTCTGTACGATTGCGAAGGTTGCGGGTTCATAACTCCGAAGAGCTTGAAGAGAATGCTGAGAAAATTGGGGGAATCGAAGTCCACAGCAGAGTGCAAGTTGATGATCGGTCAGTTTGATTTGAATGGGGATGGTTTGATTAGCTTTGAGGAGTTTCAGATAATGATGGCGTAA

mRNA sequence

ATGGAAATCAACAATTCGGCACAGTACGGTCGTGTGTTGAGTTACTTCGACGAAGATGGAGACGGCAAGATCTCGCCGTCGGAGCTGAGGAATCGGGTCGGATTGATGGGCGGAGAGCTGCTGCTGGGGGAGGCGGAGATGGCGGTGCAGTCGCTCGACTCGGACGGCGATGGGTTGCTGTGCGCGGGCGATTTCGAACGGCTTCTGGACGTGGGGGAGGAGGAGAAATTGAATGATTTGAAAGAGGCGTTTGGTCTGTACGATTGCGAAGGTTGCGGGTTCATAACTCCGAAGAGCTTGAAGAGAATGCTGAGAAAATTGGGGGAATCGAAGTCCACAGCAGAGTGCAAGTTGATGATCGGTCAGTTTGATTTGAATGGGGATGGTTTGATTAGCTTTGAGGAGTTTCAGATAATGATGGCGTAA

Coding sequence (CDS)

ATGGAAATCAACAATTCGGCACAGTACGGTCGTGTGTTGAGTTACTTCGACGAAGATGGAGACGGCAAGATCTCGCCGTCGGAGCTGAGGAATCGGGTCGGATTGATGGGCGGAGAGCTGCTGCTGGGGGAGGCGGAGATGGCGGTGCAGTCGCTCGACTCGGACGGCGATGGGTTGCTGTGCGCGGGCGATTTCGAACGGCTTCTGGACGTGGGGGAGGAGGAGAAATTGAATGATTTGAAAGAGGCGTTTGGTCTGTACGATTGCGAAGGTTGCGGGTTCATAACTCCGAAGAGCTTGAAGAGAATGCTGAGAAAATTGGGGGAATCGAAGTCCACAGCAGAGTGCAAGTTGATGATCGGTCAGTTTGATTTGAATGGGGATGGTTTGATTAGCTTTGAGGAGTTTCAGATAATGATGGCGTAA

Protein sequence

MEINNSAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVQSLDSDGDGLLCAGDFERLLDVGEEEKLNDLKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQFDLNGDGLISFEEFQIMMA
Homology
[Close]
BLAST of Cp4.1LG18g08810 vs. Swiss-Prot
Match: CML19_ORYSJ (Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica GN=CML19 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 8.9e-29
Identity = 73/140 (52.14%), Postives = 95/140 (67.86%), Query Frame = 1 

Query: 6   SAQYGRVLSYFDEDGDGKISPSELRNRV-GLMGGELLLGEAEMAVQSLDSDGDGLLCAGD 65
           +A++ RV S FD D DGKIS +ELR  +   +G ++   EAE  V S D+D DGLL   +
Sbjct: 5   TAEFRRVFSAFDRDADGKISAAELRLCMKAALGEDMSAEEAEALVSSADTDDDGLLDEEE 64

Query: 66  FERL---LDVG-EEEKLNDLKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMI 125
           F +L   L++G EEE+   L EAF +Y+ EG G ITP SLKRML KLG  +   EC+ MI
Sbjct: 65  FTKLAVQLEMGDEEERCRGLMEAFRMYEMEGEGRITPASLKRMLSKLGSHQGIEECQTMI 124

Query: 126 GQFDLNGDGLISFEEFQIMM 141
            +FDL+GDG+ISFEEF+IMM
Sbjct: 125 CRFDLDGDGVISFEEFKIMM 144

[Close]
BLAST of Cp4.1LG18g08810 vs. Swiss-Prot
Match: CML31_ORYSJ (Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica GN=CML31 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-28
Identity = 67/131 (51.15%), Postives = 92/131 (70.23%), Query Frame = 1 

Query: 16  FDEDGDGKISPSELRNRVGL-MGGELLLGEAEMAVQSLDSDGDGLLCAGDFERLLDVGEE 75
           FD DGDG+IS +ELR  +   +G E+   EA   V S+D+DGDGLLC  +F RL+   E 
Sbjct: 19  FDHDGDGRISAAELRLCMKTTLGEEVSDEEAGQLVASVDADGDGLLCEAEFVRLVQAAEV 78

Query: 76  EKLND-----LKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQFDLNGDG 135
           E+ ++     L+EAFG+Y+ EG G ITP SL+RMLR+LG  +   +C+ MI +FDLNGDG
Sbjct: 79  EEEDERRGTGLREAFGMYEMEGEGCITPTSLRRMLRRLGSDQDIDDCRAMICRFDLNGDG 138

Query: 136 LISFEEFQIMM 141
           ++SF+EF+IMM
Sbjct: 139 VLSFDEFKIMM 149

[Close]
BLAST of Cp4.1LG18g08810 vs. Swiss-Prot
Match: CML38_ARATH (Calcium-binding protein CML38 OS=Arabidopsis thaliana GN=CML38 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.4e-28
Identity = 67/130 (51.54%), Postives = 90/130 (69.23%), Query Frame = 1 

Query: 12  VLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVQSLDSDGDGLLCAGDFERLLDV 71
           V SY D + DG+ISP EL+     +G +L   EA  AV+  D+DGDG+L   +F +L+ V
Sbjct: 47  VFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLIKV 106

Query: 72  G-EEEKLNDLKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQFDLNGDGL 131
             EEEK  +LK AF LY  EG   ITP+SLK ML+KLGES++T +C++MI  FDLN DG+
Sbjct: 107 DDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNADGV 166

Query: 132 ISFEEFQIMM 141
           +SF+EF +MM
Sbjct: 167 LSFDEFALMM 176

[Close]
BLAST of Cp4.1LG18g08810 vs. Swiss-Prot
Match: CML23_ORYSJ (Putative calcium-binding protein CML23 OS=Oryza sativa subsp. japonica GN=CML23 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 5.4e-26
Identity = 70/146 (47.95%), Postives = 94/146 (64.38%), Query Frame = 1 

Query: 6   SAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVQSL-DSDGDGLLCAGD 65
           S ++ RV   FD+DGDGKIS +ELR  V    GE +  E   A+ +L D+DGDGLL   +
Sbjct: 4   SDEFRRVFGSFDQDGDGKISATELRLCVKASLGEDMPDEEVQALMALADTDGDGLLDEEE 63

Query: 66  FERLLDV----GEEEKLND------LKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTA 125
           F RL+      G+EE+ +D      L+EAF +Y+ EG G ITP SLK ML KLG     A
Sbjct: 64  FVRLVTEMEADGDEEEDDDDETCRCLREAFAMYEMEGRGCITPLSLKLMLSKLGTHLDVA 123

Query: 126 ECKLMIGQFDLNGDGLISFEEFQIMM 141
           EC+ MI +FD+NGDG+++F+EF+ MM
Sbjct: 124 ECQAMICRFDMNGDGVLTFDEFKTMM 149

[Close]
BLAST of Cp4.1LG18g08810 vs. Swiss-Prot
Match: CML37_ARATH (Calcium-binding protein CML37 OS=Arabidopsis thaliana GN=CML37 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.1e-25
Identity = 63/132 (47.73%), Postives = 85/132 (64.39%), Query Frame = 1 

Query: 12  VLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVQSLDSDGDGLLCAGDFERLL-- 71
           V  Y D + DGKIS  EL++ V L+GG L   E E  V++ D DGDG +   +F +L+  
Sbjct: 53  VFDYMDANSDGKISGEELQSCVSLLGGALSSREVEEVVKTSDVDGDGFIDFEEFLKLMEG 112

Query: 72  -DVGEEEKLNDLKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQFDLNGD 131
            D  +EE+  +LKEAFG+Y  EG  FIT  SL+R L +LGES +   CK+MI  FD N D
Sbjct: 113 EDGSDEERRKELKEAFGMYVMEGEEFITAASLRRTLSRLGESCTVDACKVMIRGFDQNDD 172

Query: 132 GLISFEEFQIMM 141
           G++SF+EF +MM
Sbjct: 173 GVLSFDEFVLMM 184

[Close]
BLAST of Cp4.1LG18g08810 vs. TrEMBL
Match: A0A0A0LU40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G002110 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 5.8e-59
Identity = 114/139 (82.01%), Postives = 124/139 (89.21%), Query Frame = 1 

Query: 3   INNSAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVQSLDSDGDGLLCA 62
           + + AQY RVLSYFDEDGDGKISPSELRNR+GL+GGEL   EAE AV+SLDSDGDGLLC 
Sbjct: 4   VKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCV 63

Query: 63  GDFERLLDVGEEEKLNDLKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQ 122
           GD ERLL+VGEEEKL DLKEAF LYD EGCGFITPK+LK+MLRKLGE KST ECK+MI +
Sbjct: 64  GDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRR 123

Query: 123 FDLNGDGLISFEEFQIMMA 142
           FDLNGDGLISFEEFQIMMA
Sbjct: 124 FDLNGDGLISFEEFQIMMA 142

[Close]
BLAST of Cp4.1LG18g08810 vs. TrEMBL
Match: I1MUN9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G128900 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 9.9e-51
Identity = 98/135 (72.59%), Postives = 117/135 (86.67%), Query Frame = 1 

Query: 7   AQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVQSLDSDGDGLLCAGDFE 66
           A+Y RVL YFDEDGDGKISPSELRNR+ +MGGE++L EAEMA+++LDSDGDGLLC  D  
Sbjct: 5   AEYERVLRYFDEDGDGKISPSELRNRIAMMGGEVMLKEAEMAIEALDSDGDGLLCLDDLM 64

Query: 67  RLLDV-GEEEKLNDLKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQFDL 126
            L++  GEEEKL DL+EAF +YD E CGFITPK+LKRML+KLGESKS  ECK+MI +FDL
Sbjct: 65  NLMEAAGEEEKLKDLREAFDMYDTERCGFITPKALKRMLKKLGESKSMVECKVMISRFDL 124

Query: 127 NGDGLISFEEFQIMM 141
           NGDG++SFEEF+IMM
Sbjct: 125 NGDGMLSFEEFRIMM 139

[Close]
BLAST of Cp4.1LG18g08810 vs. TrEMBL
Match: A0A0B2Q2P5_GLYSO (Putative calcium-binding protein CML31 OS=Glycine soja GN=glysoja_033324 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 3.7e-50
Identity = 97/135 (71.85%), Postives = 116/135 (85.93%), Query Frame = 1 

Query: 7   AQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVQSLDSDGDGLLCAGDFE 66
           A+Y RVL YFDEDGDGKISPSELRNR+ +MGGE++L EAEMA+++LDSDGDGLLC  D  
Sbjct: 4   AEYERVLRYFDEDGDGKISPSELRNRIAMMGGEVMLKEAEMAIEALDSDGDGLLCLDDLM 63

Query: 67  RLLDV-GEEEKLNDLKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQFDL 126
            L++  GEEE L DL+EAF +YD E CGFITPK+LKRML+KLGESKS  ECK+MI +FDL
Sbjct: 64  NLMEAAGEEENLKDLREAFDMYDTERCGFITPKALKRMLKKLGESKSMVECKVMISRFDL 123

Query: 127 NGDGLISFEEFQIMM 141
           NGDG++SFEEF+IMM
Sbjct: 124 NGDGMLSFEEFRIMM 138

[Close]
BLAST of Cp4.1LG18g08810 vs. TrEMBL
Match: A0A0R0JW45_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G047100 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.1e-49
Identity = 96/134 (71.64%), Postives = 116/134 (86.57%), Query Frame = 1 

Query: 8   QYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVQSLDSDGDGLLCAGDFER 67
           +Y RVL YFDEDGDGKISPSELRNR+ +MGGE++L EAEMA+++LDSD DGLLC  D  +
Sbjct: 6   EYERVLRYFDEDGDGKISPSELRNRISMMGGEVMLKEAEMAIEALDSDCDGLLCLEDLMK 65

Query: 68  LLDV-GEEEKLNDLKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQFDLN 127
           L++  GEEEKL DL+EAF +YD E CGFITPK+LKRML+KLGESKS  ECK+MI +FDLN
Sbjct: 66  LMEAAGEEEKLKDLREAFNMYDMERCGFITPKALKRMLKKLGESKSMDECKVMISRFDLN 125

Query: 128 GDGLISFEEFQIMM 141
           GDG++SFEEF+IMM
Sbjct: 126 GDGMLSFEEFRIMM 139

[Close]
BLAST of Cp4.1LG18g08810 vs. TrEMBL
Match: A0A0B2RMN6_GLYSO (Putative calcium-binding protein CML31 OS=Glycine soja GN=glysoja_016738 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.1e-49
Identity = 96/134 (71.64%), Postives = 116/134 (86.57%), Query Frame = 1 

Query: 8   QYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVQSLDSDGDGLLCAGDFER 67
           +Y RVL YFDEDGDGKISPSELRNR+ +MGGE++L EAEMA+++LDSD DGLLC  D  +
Sbjct: 5   EYERVLRYFDEDGDGKISPSELRNRISMMGGEVMLKEAEMAIEALDSDCDGLLCLEDLMK 64

Query: 68  LLDV-GEEEKLNDLKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQFDLN 127
           L++  GEEEKL DL+EAF +YD E CGFITPK+LKRML+KLGESKS  ECK+MI +FDLN
Sbjct: 65  LMEAAGEEEKLKDLREAFNMYDMERCGFITPKALKRMLKKLGESKSMDECKVMISRFDLN 124

Query: 128 GDGLISFEEFQIMM 141
           GDG++SFEEF+IMM
Sbjct: 125 GDGMLSFEEFRIMM 138

[Close]
BLAST of Cp4.1LG18g08810 vs. TAIR10
Match: AT1G76650.1 (AT1G76650.1 calmodulin-like 38)

HSP 1 Score: 125.9 bits (315), Expect = 1.9e-29
Identity = 67/130 (51.54%), Postives = 90/130 (69.23%), Query Frame = 1 

Query: 12  VLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVQSLDSDGDGLLCAGDFERLLDV 71
           V SY D + DG+ISP EL+     +G +L   EA  AV+  D+DGDG+L   +F +L+ V
Sbjct: 47  VFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLIKV 106

Query: 72  G-EEEKLNDLKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQFDLNGDGL 131
             EEEK  +LK AF LY  EG   ITP+SLK ML+KLGES++T +C++MI  FDLN DG+
Sbjct: 107 DDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNADGV 166

Query: 132 ISFEEFQIMM 141
           +SF+EF +MM
Sbjct: 167 LSFDEFALMM 176

[Close]
BLAST of Cp4.1LG18g08810 vs. TAIR10
Match: AT5G42380.1 (AT5G42380.1 calmodulin like 37)

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-26
Identity = 63/132 (47.73%), Postives = 85/132 (64.39%), Query Frame = 1 

Query: 12  VLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVQSLDSDGDGLLCAGDFERLL-- 71
           V  Y D + DGKIS  EL++ V L+GG L   E E  V++ D DGDG +   +F +L+  
Sbjct: 53  VFDYMDANSDGKISGEELQSCVSLLGGALSSREVEEVVKTSDVDGDGFIDFEEFLKLMEG 112

Query: 72  -DVGEEEKLNDLKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQFDLNGD 131
            D  +EE+  +LKEAFG+Y  EG  FIT  SL+R L +LGES +   CK+MI  FD N D
Sbjct: 113 EDGSDEERRKELKEAFGMYVMEGEEFITAASLRRTLSRLGESCTVDACKVMIRGFDQNDD 172

Query: 132 GLISFEEFQIMM 141
           G++SF+EF +MM
Sbjct: 173 GVLSFDEFVLMM 184

[Close]
BLAST of Cp4.1LG18g08810 vs. TAIR10
Match: AT1G76640.1 (AT1G76640.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 115.5 bits (288), Expect = 2.6e-26
Identity = 62/133 (46.62%), Postives = 85/133 (63.91%), Query Frame = 1 

Query: 12  VLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVQSLDSDGDGLLCAGDFERLL-- 71
           V +Y D + DG+IS  EL+     +G ++   EAE AV+  D DGDG+L   +F  L+  
Sbjct: 26  VFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALLIKG 85

Query: 72  --DVGEEEKLNDLKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQFDLNG 131
             +  EEEK   + EAF +Y  +G   ITP SLK ML KLGES++T +CK+MI  FDLN 
Sbjct: 86  NDEFTEEEKKRKIMEAFRMYIADGEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFDLNA 145

Query: 132 DGLISFEEFQIMM 141
           DG++SF+EF +MM
Sbjct: 146 DGVLSFDEFALMM 158

[Close]
BLAST of Cp4.1LG18g08810 vs. TAIR10
Match: AT3G50770.1 (AT3G50770.1 calmodulin-like 41)

HSP 1 Score: 105.1 bits (261), Expect = 3.5e-23
Identity = 59/137 (43.07%), Postives = 86/137 (62.77%), Query Frame = 1 

Query: 11  RVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVQSLDSDGDGLLCAGDFERLL- 70
           +V S+FD DGDGKIS  ELR+  G +G  +    A+ A+  +D+D DG L   DF  L+ 
Sbjct: 67  QVFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFEDFVGLMT 126

Query: 71  -----DVGEEEKLNDLKEAFGLYDCE-GCGFITPKSLKRMLRKLGESKSTAECKLMIGQF 130
                  GE +   +LK AF +++ E G G ITPK L++ML KLGES++  EC+ MI  +
Sbjct: 127 RRDLYGDGEVDGDGELKTAFEMFEVEKGSGCITPKGLQKMLVKLGESRTYGECEAMIKFY 186

Query: 131 DLNGDGLISFEEFQIMM 141
           D++G+G++ F EF+ MM
Sbjct: 187 DIDGNGILDFHEFRQMM 203

[Close]
BLAST of Cp4.1LG18g08810 vs. TAIR10
Match: AT3G01830.1 (AT3G01830.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 102.8 bits (255), Expect = 1.7e-22
Identity = 65/143 (45.45%), Postives = 88/143 (61.54%), Query Frame = 1 

Query: 3   INNSAQYGRVLSYFDEDGDGKISPSELRNRV-GLMGGELLLGEAEMAVQSL--DSDGDGL 62
           +N   +Y RV S FD+   GK+S S +   V  +  G+  + + E        +S  D  
Sbjct: 6   VNKRDEYQRVFSCFDKSHQGKVSVSTIERCVDAIKSGKRAVVDQEDTTNPNPEESTDDKS 65

Query: 63  LCAGDFERLLDVGEE-EKLNDLKEAFGLYD-CEGCGFITPKSLKRMLRKLGESKSTAECK 122
           L   DF +L++ GEE +K  DLKEAF LY+  EG   ITPKSLKRML  LGESKS  +C+
Sbjct: 66  LELEDFVKLVEEGEEADKEKDLKEAFKLYEESEG---ITPKSLKRMLSLLGESKSLKDCE 125

Query: 123 LMIGQFDLNGDGLISFEEFQIMM 141
           +MI QFD+N DG+I+F+EF+ MM
Sbjct: 126 VMISQFDINRDGIINFDEFRAMM 145

[Close]
BLAST of Cp4.1LG18g08810 vs. NCBI nr
Match: gi|659128944|ref|XP_008464450.1| (PREDICTED: putative calcium-binding protein CML19 [Cucumis melo])

HSP 1 Score: 242.3 bits (617), Expect = 5.2e-61
Identity = 121/142 (85.21%), Postives = 129/142 (90.85%), Query Frame = 1 

Query: 1   MEINNS-AQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVQSLDSDGDGL 60
           MEIN S AQY RVLSYFDEDGDGKISPSELRNR+GL+GGELL  EAE AV+SLDSDGDGL
Sbjct: 1   MEINKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGL 60

Query: 61  LCAGDFERLLDVGEEEKLNDLKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLM 120
           LCAGD ERLL+VGEEEKL DLKEAF LYD EGCGFITPK+LK+MLRKLGE KST ECK+M
Sbjct: 61  LCAGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 120

Query: 121 IGQFDLNGDGLISFEEFQIMMA 142
           I +FDLNGDGLISFEEFQIMMA
Sbjct: 121 IRRFDLNGDGLISFEEFQIMMA 142

[Close]
BLAST of Cp4.1LG18g08810 vs. NCBI nr
Match: gi|449440564|ref|XP_004138054.1| (PREDICTED: putative calcium-binding protein CML19 [Cucumis sativus])

HSP 1 Score: 235.0 bits (598), Expect = 8.3e-59
Identity = 114/139 (82.01%), Postives = 124/139 (89.21%), Query Frame = 1 

Query: 3   INNSAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVQSLDSDGDGLLCA 62
           + + AQY RVLSYFDEDGDGKISPSELRNR+GL+GGEL   EAE AV+SLDSDGDGLLC 
Sbjct: 4   VKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCV 63

Query: 63  GDFERLLDVGEEEKLNDLKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQ 122
           GD ERLL+VGEEEKL DLKEAF LYD EGCGFITPK+LK+MLRKLGE KST ECK+MI +
Sbjct: 64  GDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRR 123

Query: 123 FDLNGDGLISFEEFQIMMA 142
           FDLNGDGLISFEEFQIMMA
Sbjct: 124 FDLNGDGLISFEEFQIMMA 142

[Close]
BLAST of Cp4.1LG18g08810 vs. NCBI nr
Match: gi|356563192|ref|XP_003549848.1| (PREDICTED: putative calcium-binding protein CML19 [Glycine max])

HSP 1 Score: 207.6 bits (527), Expect = 1.4e-50
Identity = 98/135 (72.59%), Postives = 117/135 (86.67%), Query Frame = 1 

Query: 7   AQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVQSLDSDGDGLLCAGDFE 66
           A+Y RVL YFDEDGDGKISPSELRNR+ +MGGE++L EAEMA+++LDSDGDGLLC  D  
Sbjct: 5   AEYERVLRYFDEDGDGKISPSELRNRIAMMGGEVMLKEAEMAIEALDSDGDGLLCLDDLM 64

Query: 67  RLLDV-GEEEKLNDLKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQFDL 126
            L++  GEEEKL DL+EAF +YD E CGFITPK+LKRML+KLGESKS  ECK+MI +FDL
Sbjct: 65  NLMEAAGEEEKLKDLREAFDMYDTERCGFITPKALKRMLKKLGESKSMVECKVMISRFDL 124

Query: 127 NGDGLISFEEFQIMM 141
           NGDG++SFEEF+IMM
Sbjct: 125 NGDGMLSFEEFRIMM 139

[Close]
BLAST of Cp4.1LG18g08810 vs. NCBI nr
Match: gi|734356349|gb|KHN14097.1| (Putative calcium-binding protein CML31 [Glycine soja])

HSP 1 Score: 205.7 bits (522), Expect = 5.4e-50
Identity = 97/135 (71.85%), Postives = 116/135 (85.93%), Query Frame = 1 

Query: 7   AQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVQSLDSDGDGLLCAGDFE 66
           A+Y RVL YFDEDGDGKISPSELRNR+ +MGGE++L EAEMA+++LDSDGDGLLC  D  
Sbjct: 4   AEYERVLRYFDEDGDGKISPSELRNRIAMMGGEVMLKEAEMAIEALDSDGDGLLCLDDLM 63

Query: 67  RLLDV-GEEEKLNDLKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQFDL 126
            L++  GEEE L DL+EAF +YD E CGFITPK+LKRML+KLGESKS  ECK+MI +FDL
Sbjct: 64  NLMEAAGEEENLKDLREAFDMYDTERCGFITPKALKRMLKKLGESKSMVECKVMISRFDL 123

Query: 127 NGDGLISFEEFQIMM 141
           NGDG++SFEEF+IMM
Sbjct: 124 NGDGMLSFEEFRIMM 138

[Close]
BLAST of Cp4.1LG18g08810 vs. NCBI nr
Match: gi|571453757|ref|XP_006579596.1| (PREDICTED: putative calcium-binding protein CML19 [Glycine max])

HSP 1 Score: 202.2 bits (513), Expect = 5.9e-49
Identity = 96/134 (71.64%), Postives = 116/134 (86.57%), Query Frame = 1 

Query: 8   QYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVQSLDSDGDGLLCAGDFER 67
           +Y RVL YFDEDGDGKISPSELRNR+ +MGGE++L EAEMA+++LDSD DGLLC  D  +
Sbjct: 6   EYERVLRYFDEDGDGKISPSELRNRISMMGGEVMLKEAEMAIEALDSDCDGLLCLEDLMK 65

Query: 68  LLDV-GEEEKLNDLKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQFDLN 127
           L++  GEEEKL DL+EAF +YD E CGFITPK+LKRML+KLGESKS  ECK+MI +FDLN
Sbjct: 66  LMEAAGEEEKLKDLREAFNMYDMERCGFITPKALKRMLKKLGESKSMDECKVMISRFDLN 125

Query: 128 GDGLISFEEFQIMM 141
           GDG++SFEEF+IMM
Sbjct: 126 GDGMLSFEEFRIMM 139

The following BLAST results are available for this feature:
BLAST of Cp4.1LG18g08810 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CML19_ORYSJ8.9e-2952.14Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica GN=CML19 ... [more]
CML31_ORYSJ1.2e-2851.15Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica GN=CML31 ... [more]
CML38_ARATH3.4e-2851.54Calcium-binding protein CML38 OS=Arabidopsis thaliana GN=CML38 PE=2 SV=1[more]
CML23_ORYSJ5.4e-2647.95Putative calcium-binding protein CML23 OS=Oryza sativa subsp. japonica GN=CML23 ... [more]
CML37_ARATH2.1e-2547.73Calcium-binding protein CML37 OS=Arabidopsis thaliana GN=CML37 PE=2 SV=1[more]
BLAST of Cp4.1LG18g08810 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LU40_CUCSA5.8e-5982.01Uncharacterized protein OS=Cucumis sativus GN=Csa_1G002110 PE=4 SV=1[more]
I1MUN9_SOYBN9.9e-5172.59Uncharacterized protein OS=Glycine max GN=GLYMA_17G128900 PE=4 SV=1[more]
A0A0B2Q2P5_GLYSO3.7e-5071.85Putative calcium-binding protein CML31 OS=Glycine soja GN=glysoja_033324 PE=4 SV... [more]
A0A0R0JW45_SOYBN4.1e-4971.64Uncharacterized protein OS=Glycine max GN=GLYMA_05G047100 PE=4 SV=1[more]
A0A0B2RMN6_GLYSO4.1e-4971.64Putative calcium-binding protein CML31 OS=Glycine soja GN=glysoja_016738 PE=4 SV... [more]
BLAST of Cp4.1LG18g08810 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G76650.11.9e-2951.54 calmodulin-like 38[more]
AT5G42380.11.2e-2647.73 calmodulin like 37[more]
AT1G76640.12.6e-2646.62 Calcium-binding EF-hand family protein[more]
AT3G50770.13.5e-2343.07 calmodulin-like 41[more]
AT3G01830.11.7e-2245.45 Calcium-binding EF-hand family protein[more]
BLAST of Cp4.1LG18g08810 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659128944|ref|XP_008464450.1|5.2e-6185.21PREDICTED: putative calcium-binding protein CML19 [Cucumis melo][more]
gi|449440564|ref|XP_004138054.1|8.3e-5982.01PREDICTED: putative calcium-binding protein CML19 [Cucumis sativus][more]
gi|356563192|ref|XP_003549848.1|1.4e-5072.59PREDICTED: putative calcium-binding protein CML19 [Glycine max][more]
gi|734356349|gb|KHN14097.1|5.4e-5071.85Putative calcium-binding protein CML31 [Glycine soja][more]
gi|571453757|ref|XP_006579596.1|5.9e-4971.64PREDICTED: putative calcium-binding protein CML19 [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
IPR002048EF_hand_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0044237 cellular metabolic process
biological_process GO:0071229 cellular response to acid chemical
biological_process GO:0071310 cellular response to organic substance
biological_process GO:1901701 cellular response to oxygen-containing compound
biological_process GO:0098542 defense response to other organism
biological_process GO:0045087 innate immune response
biological_process GO:0071704 organic substance metabolic process
biological_process GO:0031347 regulation of defense response
biological_process GO:0007165 signal transduction
biological_process GO:0044710 single-organism metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG18g08810.1Cp4.1LG18g08810.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 14..31
score: 3.
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 78..140
score: 1.7
IPR002048EF-hand domainSMARTSM00054efh_1coord: 8..36
score: 1.2coord: 44..72
score: 58.0coord: 79..107
score: 0.27coord: 115..141
score:
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 75..110
score: 10.469coord: 111..141
score: 12.672coord: 40..74
score: 6.061coord: 4..39
score: 11
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 57..140
score: 2.7E-22coord: 10..56
score: 7.
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 9..141
score: 4.49
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 53..65
score: -coord: 17..29
score: -coord: 124..136
scor
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 1..140
score: 3.9
NoneNo IPR availablePANTHERPTHR10891:SF621SUBFAMILY NOT NAMEDcoord: 1..140
score: 3.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG18g08810Cucsa.157410Cucumber (Gy14) v1cgycpeB0420
Cp4.1LG18g08810CmaCh10G000700Cucurbita maxima (Rimu)cmacpeB080
Cp4.1LG18g08810CmaCh11G014910Cucurbita maxima (Rimu)cmacpeB130
Cp4.1LG18g08810CmaCh11G000410Cucurbita maxima (Rimu)cmacpeB133
Cp4.1LG18g08810CmoCh10G000650Cucurbita moschata (Rifu)cmocpeB055
Cp4.1LG18g08810CmoCh11G016280Cucurbita moschata (Rifu)cmocpeB111
Cp4.1LG18g08810CmoCh11G000420Cucurbita moschata (Rifu)cmocpeB109
Cp4.1LG18g08810Cla019269Watermelon (97103) v1cpewmB373
Cp4.1LG18g08810Csa1G002110Cucumber (Chinese Long) v2cpecuB361
Cp4.1LG18g08810MELO3C026214Melon (DHL92) v3.5.1cpemeB328
Cp4.1LG18g08810ClCG05G013360Watermelon (Charleston Gray)cpewcgB332
Cp4.1LG18g08810ClCG06G017800Watermelon (Charleston Gray)cpewcgB336
Cp4.1LG18g08810CSPI01G00620Wild cucumber (PI 183967)cpecpiB361
Cp4.1LG18g08810Lsi06G016340Bottle gourd (USVL1VR-Ls)cpelsiB298
Cp4.1LG18g08810MELO3C026214.2Melon (DHL92) v3.6.1cpemedB386
Cp4.1LG18g08810CsaV3_3G027200Cucumber (Chinese Long) v3cpecucB0457
Cp4.1LG18g08810CsaV3_1G000650Cucumber (Chinese Long) v3cpecucB0442
Cp4.1LG18g08810Bhi02G000399Wax gourdcpewgoB0469
Cp4.1LG18g08810CsGy3G024090Cucumber (Gy14) v2cgybcpeB361
Cp4.1LG18g08810CsGy1G000630Cucumber (Gy14) v2cgybcpeB053
Cp4.1LG18g08810Carg15572Silver-seed gourdcarcpeB0516
Cp4.1LG18g08810Carg20175Silver-seed gourdcarcpeB1456
Cp4.1LG18g08810Carg10289Silver-seed gourdcarcpeB0508
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG18g08810Cp4.1LG04g16040Cucurbita pepo (Zucchini)cpecpeB361
Cp4.1LG18g08810Cp4.1LG04g05890Cucurbita pepo (Zucchini)cpecpeB367
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG18g08810Cucurbita pepo (Zucchini)cpecpeB029
Cp4.1LG18g08810Cucurbita pepo (Zucchini)cpecpeB351
Cp4.1LG18g08810Cucurbita pepo (Zucchini)cpecpeB358
Cp4.1LG18g08810Cucumber (Gy14) v1cgycpeB1035
Cp4.1LG18g08810Cucurbita maxima (Rimu)cmacpeB227
Cp4.1LG18g08810Cucurbita maxima (Rimu)cmacpeB274
Cp4.1LG18g08810Cucurbita moschata (Rifu)cmocpeB194
Cp4.1LG18g08810Cucurbita moschata (Rifu)cmocpeB236
Cp4.1LG18g08810Cucurbita moschata (Rifu)cmocpeB389
Cp4.1LG18g08810Wild cucumber (PI 183967)cpecpiB359
Cp4.1LG18g08810Cucumber (Chinese Long) v2cpecuB359
Cp4.1LG18g08810Bottle gourd (USVL1VR-Ls)cpelsiB288
Cp4.1LG18g08810Watermelon (Charleston Gray)cpewcgB325
Cp4.1LG18g08810Watermelon (97103) v1cpewmB352
Cp4.1LG18g08810Melon (DHL92) v3.5.1cpemeB324
Cp4.1LG18g08810Cucumber (Gy14) v2cgybcpeB049
Cp4.1LG18g08810Melon (DHL92) v3.6.1cpemedB381
Cp4.1LG18g08810Silver-seed gourdcarcpeB0610
Cp4.1LG18g08810Silver-seed gourdcarcpeB0695
Cp4.1LG18g08810Silver-seed gourdcarcpeB1398
Cp4.1LG18g08810Cucumber (Chinese Long) v3cpecucB0439
Cp4.1LG18g08810Wax gourdcpewgoB0447