Cp4.1LG04g16040 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g16040
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionEF hand calcium-binding family protein
LocationCp4.1LG04 : 12518798 .. 12519223 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATCACCAGTGCCGCACACTACGACCACGTCTTGCGTTACTTCGATGAAGATGGCGACGGCAAAATCTCGCCGTCGGAGCTGAGGAATCGTCTCGGATTGATAGGCGGAGAGCTTCTGCCGGCGGAGGCAGAGGCGGCGGTGGAATCGCTCGACTCCGACGGCGACGGACTGCTCTGCGTCGGTGATATCGAGCGGCTACTGGACGTGGGGGAGGAAGAGAAATTGAAGGACTTGAGAGAGGCTTTTGGATTGTACGATGCTGAAGGCTGCGGGTTCATAACTCCGAAGAGCTTGAAGAGAATGCTTAAAAAATTGGGGGAAACGAAATCCACGGCGGAGTGTAAAGTGATGATTCGCCGCTTCGATTTGAACGGTGACGGTCTGATTAGCTTTGAGGAGTTTCAGATCATGATGGCCTGA

mRNA sequence

ATGGAGATCACCAGTGCCGCACACTACGACCACGTCTTGCGTTACTTCGATGAAGATGGCGACGGCAAAATCTCGCCGTCGGAGCTGAGGAATCGTCTCGGATTGATAGGCGGAGAGCTTCTGCCGGCGGAGGCAGAGGCGGCGGTGGAATCGCTCGACTCCGACGGCGACGGACTGCTCTGCGTCGGTGATATCGAGCGGCTACTGGACGTGGGGGAGGAAGAGAAATTGAAGGACTTGAGAGAGGCTTTTGGATTGTACGATGCTGAAGGCTGCGGGTTCATAACTCCGAAGAGCTTGAAGAGAATGCTTAAAAAATTGGGGGAAACGAAATCCACGGCGGAGTGTAAAGTGATGATTCGCCGCTTCGATTTGAACGGTGACGGTCTGATTAGCTTTGAGGAGTTTCAGATCATGATGGCCTGA

Coding sequence (CDS)

ATGGAGATCACCAGTGCCGCACACTACGACCACGTCTTGCGTTACTTCGATGAAGATGGCGACGGCAAAATCTCGCCGTCGGAGCTGAGGAATCGTCTCGGATTGATAGGCGGAGAGCTTCTGCCGGCGGAGGCAGAGGCGGCGGTGGAATCGCTCGACTCCGACGGCGACGGACTGCTCTGCGTCGGTGATATCGAGCGGCTACTGGACGTGGGGGAGGAAGAGAAATTGAAGGACTTGAGAGAGGCTTTTGGATTGTACGATGCTGAAGGCTGCGGGTTCATAACTCCGAAGAGCTTGAAGAGAATGCTTAAAAAATTGGGGGAAACGAAATCCACGGCGGAGTGTAAAGTGATGATTCGCCGCTTCGATTTGAACGGTGACGGTCTGATTAGCTTTGAGGAGTTTCAGATCATGATGGCCTGA

Protein sequence

MEITSAAHYDHVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA
Homology
[Close]
BLAST of Cp4.1LG04g16040 vs. Swiss-Prot
Match: CML31_ORYSJ (Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica GN=CML31 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.0e-28
Identity = 67/131 (51.15%), Postives = 90/131 (68.70%), Query Frame = 1 

Query: 16  FDEDGDGKISPSELRNRLGL-IGGELLPAEAEAAVESLDSDGDGLLCVGDIERLLDVGEE 75
           FD DGDG+IS +ELR  +   +G E+   EA   V S+D+DGDGLLC  +  RL+   E 
Sbjct: 19  FDHDGDGRISAAELRLCMKTTLGEEVSDEEAGQLVASVDADGDGLLCEAEFVRLVQAAEV 78

Query: 76  EKLKD-----LREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRFDLNGDG 135
           E+  +     LREAFG+Y+ EG G ITP SL+RML++LG  +   +C+ MI RFDLNGDG
Sbjct: 79  EEEDERRGTGLREAFGMYEMEGEGCITPTSLRRMLRRLGSDQDIDDCRAMICRFDLNGDG 138

Query: 136 LISFEEFQIMM 141
           ++SF+EF+IMM
Sbjct: 139 VLSFDEFKIMM 149

[Close]
BLAST of Cp4.1LG04g16040 vs. Swiss-Prot
Match: CML19_ORYSJ (Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica GN=CML19 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.0e-28
Identity = 72/143 (50.35%), Postives = 94/143 (65.73%), Query Frame = 1 

Query: 3   ITSAAHYDHVLRYFDEDGDGKISPSELRNRL-GLIGGELLPAEAEAAVESLDSDGDGLLC 62
           + + A +  V   FD D DGKIS +ELR  +   +G ++   EAEA V S D+D DGLL 
Sbjct: 2   VAATAEFRRVFSAFDRDADGKISAAELRLCMKAALGEDMSAEEAEALVSSADTDDDGLLD 61

Query: 63  VGDIERL---LDVG-EEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECK 122
             +  +L   L++G EEE+ + L EAF +Y+ EG G ITP SLKRML KLG  +   EC+
Sbjct: 62  EEEFTKLAVQLEMGDEEERCRGLMEAFRMYEMEGEGRITPASLKRMLSKLGSHQGIEECQ 121

Query: 123 VMIRRFDLNGDGLISFEEFQIMM 141
            MI RFDL+GDG+ISFEEF+IMM
Sbjct: 122 TMICRFDLDGDGVISFEEFKIMM 144

[Close]
BLAST of Cp4.1LG04g16040 vs. Swiss-Prot
Match: CML38_ARATH (Calcium-binding protein CML38 OS=Arabidopsis thaliana GN=CML38 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.0e-28
Identity = 67/130 (51.54%), Postives = 89/130 (68.46%), Query Frame = 1 

Query: 12  VLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLLCVGDIERLLDV 71
           V  Y D + DG+ISP EL+     +G +L   EA AAV   D+DGDG+L   +  +L+ V
Sbjct: 47  VFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLIKV 106

Query: 72  G-EEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRFDLNGDGL 131
             EEEK  +L+ AF LY AEG   ITP+SLK MLKKLGE+++T +C+VMI  FDLN DG+
Sbjct: 107 DDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNADGV 166

Query: 132 ISFEEFQIMM 141
           +SF+EF +MM
Sbjct: 167 LSFDEFALMM 176

[Close]
BLAST of Cp4.1LG04g16040 vs. Swiss-Prot
Match: CML39_ARATH (Calcium-binding protein CML39 OS=Arabidopsis thaliana GN=CML39 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-26
Identity = 63/133 (47.37%), Postives = 88/133 (66.17%), Query Frame = 1 

Query: 12  VLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLLCVGDIERLL-- 71
           V  Y D + DG+IS  EL+     +G ++   EAEAAV+  D DGDG+L + +   L+  
Sbjct: 26  VFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALLIKG 85

Query: 72  --DVGEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRFDLNG 131
             +  EEEK + + EAF +Y A+G   ITP SLK ML KLGE+++T +CKVMI+ FDLN 
Sbjct: 86  NDEFTEEEKKRKIMEAFRMYIADGEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFDLNA 145

Query: 132 DGLISFEEFQIMM 141
           DG++SF+EF +MM
Sbjct: 146 DGVLSFDEFALMM 158

[Close]
BLAST of Cp4.1LG04g16040 vs. Swiss-Prot
Match: CML37_ARATH (Calcium-binding protein CML37 OS=Arabidopsis thaliana GN=CML37 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-25
Identity = 62/132 (46.97%), Postives = 86/132 (65.15%), Query Frame = 1 

Query: 12  VLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLLCVGDIERLL-- 71
           V  Y D + DGKIS  EL++ + L+GG L   E E  V++ D DGDG +   +  +L+  
Sbjct: 53  VFDYMDANSDGKISGEELQSCVSLLGGALSSREVEEVVKTSDVDGDGFIDFEEFLKLMEG 112

Query: 72  -DVGEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRFDLNGD 131
            D  +EE+ K+L+EAFG+Y  EG  FIT  SL+R L +LGE+ +   CKVMIR FD N D
Sbjct: 113 EDGSDEERRKELKEAFGMYVMEGEEFITAASLRRTLSRLGESCTVDACKVMIRGFDQNDD 172

Query: 132 GLISFEEFQIMM 141
           G++SF+EF +MM
Sbjct: 173 GVLSFDEFVLMM 184

[Close]
BLAST of Cp4.1LG04g16040 vs. TrEMBL
Match: A0A0A0LU40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G002110 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-62
Identity = 121/139 (87.05%), Postives = 129/139 (92.81%), Query Frame = 1 

Query: 3   ITSAAHYDHVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLLCV 62
           + S A YD VL YFDEDGDGKISPSELRNRLGLIGGEL  AEAEAAVESLDSDGDGLLCV
Sbjct: 4   VKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCV 63

Query: 63  GDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRR 122
           GDIERLL+VGEEEKLKDL+EAF LYD+EGCGFITPK+LK+ML+KLGE KST ECK+MIRR
Sbjct: 64  GDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRR 123

Query: 123 FDLNGDGLISFEEFQIMMA 142
           FDLNGDGLISFEEFQIMMA
Sbjct: 124 FDLNGDGLISFEEFQIMMA 142

[Close]
BLAST of Cp4.1LG04g16040 vs. TrEMBL
Match: I1MUN9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G128900 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.6e-51
Identity = 100/135 (74.07%), Postives = 118/135 (87.41%), Query Frame = 1 

Query: 7   AHYDHVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLLCVGDIE 66
           A Y+ VLRYFDEDGDGKISPSELRNR+ ++GGE++  EAE A+E+LDSDGDGLLC+ D+ 
Sbjct: 5   AEYERVLRYFDEDGDGKISPSELRNRIAMMGGEVMLKEAEMAIEALDSDGDGLLCLDDLM 64

Query: 67  RLLDV-GEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRFDL 126
            L++  GEEEKLKDLREAF +YD E CGFITPK+LKRMLKKLGE+KS  ECKVMI RFDL
Sbjct: 65  NLMEAAGEEEKLKDLREAFDMYDTERCGFITPKALKRMLKKLGESKSMVECKVMISRFDL 124

Query: 127 NGDGLISFEEFQIMM 141
           NGDG++SFEEF+IMM
Sbjct: 125 NGDGMLSFEEFRIMM 139

[Close]
BLAST of Cp4.1LG04g16040 vs. TrEMBL
Match: A0A0B2Q2P5_GLYSO (Putative calcium-binding protein CML31 OS=Glycine soja GN=glysoja_033324 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 9.9e-51
Identity = 99/135 (73.33%), Postives = 117/135 (86.67%), Query Frame = 1 

Query: 7   AHYDHVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLLCVGDIE 66
           A Y+ VLRYFDEDGDGKISPSELRNR+ ++GGE++  EAE A+E+LDSDGDGLLC+ D+ 
Sbjct: 4   AEYERVLRYFDEDGDGKISPSELRNRIAMMGGEVMLKEAEMAIEALDSDGDGLLCLDDLM 63

Query: 67  RLLDV-GEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRFDL 126
            L++  GEEE LKDLREAF +YD E CGFITPK+LKRMLKKLGE+KS  ECKVMI RFDL
Sbjct: 64  NLMEAAGEEENLKDLREAFDMYDTERCGFITPKALKRMLKKLGESKSMVECKVMISRFDL 123

Query: 127 NGDGLISFEEFQIMM 141
           NGDG++SFEEF+IMM
Sbjct: 124 NGDGMLSFEEFRIMM 138

[Close]
BLAST of Cp4.1LG04g16040 vs. TrEMBL
Match: A0A0R0JW45_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G047100 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-49
Identity = 98/133 (73.68%), Postives = 117/133 (87.97%), Query Frame = 1 

Query: 9   YDHVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLLCVGDIERL 68
           Y+ VLRYFDEDGDGKISPSELRNR+ ++GGE++  EAE A+E+LDSD DGLLC+ D+ +L
Sbjct: 7   YERVLRYFDEDGDGKISPSELRNRISMMGGEVMLKEAEMAIEALDSDCDGLLCLEDLMKL 66

Query: 69  LDV-GEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRFDLNG 128
           ++  GEEEKLKDLREAF +YD E CGFITPK+LKRMLKKLGE+KS  ECKVMI RFDLNG
Sbjct: 67  MEAAGEEEKLKDLREAFNMYDMERCGFITPKALKRMLKKLGESKSMDECKVMISRFDLNG 126

Query: 129 DGLISFEEFQIMM 141
           DG++SFEEF+IMM
Sbjct: 127 DGMLSFEEFRIMM 139

[Close]
BLAST of Cp4.1LG04g16040 vs. TrEMBL
Match: A0A0B2RMN6_GLYSO (Putative calcium-binding protein CML31 OS=Glycine soja GN=glysoja_016738 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-49
Identity = 98/133 (73.68%), Postives = 117/133 (87.97%), Query Frame = 1 

Query: 9   YDHVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLLCVGDIERL 68
           Y+ VLRYFDEDGDGKISPSELRNR+ ++GGE++  EAE A+E+LDSD DGLLC+ D+ +L
Sbjct: 6   YERVLRYFDEDGDGKISPSELRNRISMMGGEVMLKEAEMAIEALDSDCDGLLCLEDLMKL 65

Query: 69  LDV-GEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRFDLNG 128
           ++  GEEEKLKDLREAF +YD E CGFITPK+LKRMLKKLGE+KS  ECKVMI RFDLNG
Sbjct: 66  MEAAGEEEKLKDLREAFNMYDMERCGFITPKALKRMLKKLGESKSMDECKVMISRFDLNG 125

Query: 129 DGLISFEEFQIMM 141
           DG++SFEEF+IMM
Sbjct: 126 DGMLSFEEFRIMM 138

[Close]
BLAST of Cp4.1LG04g16040 vs. TAIR10
Match: AT1G76650.1 (AT1G76650.1 calmodulin-like 38)

HSP 1 Score: 126.7 bits (317), Expect = 1.1e-29
Identity = 67/130 (51.54%), Postives = 89/130 (68.46%), Query Frame = 1 

Query: 12  VLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLLCVGDIERLLDV 71
           V  Y D + DG+ISP EL+     +G +L   EA AAV   D+DGDG+L   +  +L+ V
Sbjct: 47  VFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLIKV 106

Query: 72  G-EEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRFDLNGDGL 131
             EEEK  +L+ AF LY AEG   ITP+SLK MLKKLGE+++T +C+VMI  FDLN DG+
Sbjct: 107 DDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNADGV 166

Query: 132 ISFEEFQIMM 141
           +SF+EF +MM
Sbjct: 167 LSFDEFALMM 176

[Close]
BLAST of Cp4.1LG04g16040 vs. TAIR10
Match: AT1G76640.1 (AT1G76640.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 120.9 bits (302), Expect = 6.1e-28
Identity = 63/133 (47.37%), Postives = 88/133 (66.17%), Query Frame = 1 

Query: 12  VLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLLCVGDIERLL-- 71
           V  Y D + DG+IS  EL+     +G ++   EAEAAV+  D DGDG+L + +   L+  
Sbjct: 26  VFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALLIKG 85

Query: 72  --DVGEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRFDLNG 131
             +  EEEK + + EAF +Y A+G   ITP SLK ML KLGE+++T +CKVMI+ FDLN 
Sbjct: 86  NDEFTEEEKKRKIMEAFRMYIADGEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFDLNA 145

Query: 132 DGLISFEEFQIMM 141
           DG++SF+EF +MM
Sbjct: 146 DGVLSFDEFALMM 158

[Close]
BLAST of Cp4.1LG04g16040 vs. TAIR10
Match: AT5G42380.1 (AT5G42380.1 calmodulin like 37)

HSP 1 Score: 117.5 bits (293), Expect = 6.8e-27
Identity = 62/132 (46.97%), Postives = 86/132 (65.15%), Query Frame = 1 

Query: 12  VLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLLCVGDIERLL-- 71
           V  Y D + DGKIS  EL++ + L+GG L   E E  V++ D DGDG +   +  +L+  
Sbjct: 53  VFDYMDANSDGKISGEELQSCVSLLGGALSSREVEEVVKTSDVDGDGFIDFEEFLKLMEG 112

Query: 72  -DVGEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRFDLNGD 131
            D  +EE+ K+L+EAFG+Y  EG  FIT  SL+R L +LGE+ +   CKVMIR FD N D
Sbjct: 113 EDGSDEERRKELKEAFGMYVMEGEEFITAASLRRTLSRLGESCTVDACKVMIRGFDQNDD 172

Query: 132 GLISFEEFQIMM 141
           G++SF+EF +MM
Sbjct: 173 GVLSFDEFVLMM 184

[Close]
BLAST of Cp4.1LG04g16040 vs. TAIR10
Match: AT3G50770.1 (AT3G50770.1 calmodulin-like 41)

HSP 1 Score: 102.4 bits (254), Expect = 2.3e-22
Identity = 55/136 (40.44%), Postives = 84/136 (61.76%), Query Frame = 1 

Query: 12  VLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLLCVGDIERLLDV 71
           V  +FD DGDGKIS  ELR+  G +G  +    A+ A+  +D+D DG L   D   L+  
Sbjct: 68  VFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFEDFVGLMTR 127

Query: 72  ------GEEEKLKDLREAFGLYDAE-GCGFITPKSLKRMLKKLGETKSTAECKVMIRRFD 131
                 GE +   +L+ AF +++ E G G ITPK L++ML KLGE+++  EC+ MI+ +D
Sbjct: 128 RDLYGDGEVDGDGELKTAFEMFEVEKGSGCITPKGLQKMLVKLGESRTYGECEAMIKFYD 187

Query: 132 LNGDGLISFEEFQIMM 141
           ++G+G++ F EF+ MM
Sbjct: 188 IDGNGILDFHEFRQMM 203

[Close]
BLAST of Cp4.1LG04g16040 vs. TAIR10
Match: AT5G37770.1 (AT5G37770.1 EF hand calcium-binding protein family)

HSP 1 Score: 98.2 bits (243), Expect = 4.3e-21
Identity = 50/136 (36.76%), Postives = 78/136 (57.35%), Query Frame = 1 

Query: 12  VLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLLCVGDIERLLDV 71
           V + FD++GDGKIS  EL+  +  +     P E    ++  D DG+G + + +   L  +
Sbjct: 21  VFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLDGNGFIDLDEFVALFQI 80

Query: 72  G------EEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRFDL 131
           G          + DL+EAF LYD +G G I+ K L  ++K LGE  S  +CK MI + D+
Sbjct: 81  GIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGEKCSVQDCKKMISKVDI 140

Query: 132 NGDGLISFEEFQIMMA 142
           +GDG ++F+EF+ MM+
Sbjct: 141 DGDGCVNFDEFKKMMS 156

[Close]
BLAST of Cp4.1LG04g16040 vs. NCBI nr
Match: gi|659128944|ref|XP_008464450.1| (PREDICTED: putative calcium-binding protein CML19 [Cucumis melo])

HSP 1 Score: 248.1 bits (632), Expect = 9.5e-63
Identity = 124/142 (87.32%), Postives = 131/142 (92.25%), Query Frame = 1 

Query: 1   MEIT-SAAHYDHVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGL 60
           MEI  S A YD VL YFDEDGDGKISPSELRNRLGLIGGELL AEAEAAVESLDSDGDGL
Sbjct: 1   MEINKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGL 60

Query: 61  LCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVM 120
           LC GDIERLL+VGEEEKLKDL+EAF LYD+EGCGFITPK+LK+ML+KLGE KST ECK+M
Sbjct: 61  LCAGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 120

Query: 121 IRRFDLNGDGLISFEEFQIMMA 142
           IRRFDLNGDGLISFEEFQIMMA
Sbjct: 121 IRRFDLNGDGLISFEEFQIMMA 142

[Close]
BLAST of Cp4.1LG04g16040 vs. NCBI nr
Match: gi|449440564|ref|XP_004138054.1| (PREDICTED: putative calcium-binding protein CML19 [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 1.6e-62
Identity = 121/139 (87.05%), Postives = 129/139 (92.81%), Query Frame = 1 

Query: 3   ITSAAHYDHVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLLCV 62
           + S A YD VL YFDEDGDGKISPSELRNRLGLIGGEL  AEAEAAVESLDSDGDGLLCV
Sbjct: 4   VKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCV 63

Query: 63  GDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRR 122
           GDIERLL+VGEEEKLKDL+EAF LYD+EGCGFITPK+LK+ML+KLGE KST ECK+MIRR
Sbjct: 64  GDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRR 123

Query: 123 FDLNGDGLISFEEFQIMMA 142
           FDLNGDGLISFEEFQIMMA
Sbjct: 124 FDLNGDGLISFEEFQIMMA 142

[Close]
BLAST of Cp4.1LG04g16040 vs. NCBI nr
Match: gi|356563192|ref|XP_003549848.1| (PREDICTED: putative calcium-binding protein CML19 [Glycine max])

HSP 1 Score: 209.5 bits (532), Expect = 3.7e-51
Identity = 100/135 (74.07%), Postives = 118/135 (87.41%), Query Frame = 1 

Query: 7   AHYDHVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLLCVGDIE 66
           A Y+ VLRYFDEDGDGKISPSELRNR+ ++GGE++  EAE A+E+LDSDGDGLLC+ D+ 
Sbjct: 5   AEYERVLRYFDEDGDGKISPSELRNRIAMMGGEVMLKEAEMAIEALDSDGDGLLCLDDLM 64

Query: 67  RLLDV-GEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRFDL 126
            L++  GEEEKLKDLREAF +YD E CGFITPK+LKRMLKKLGE+KS  ECKVMI RFDL
Sbjct: 65  NLMEAAGEEEKLKDLREAFDMYDTERCGFITPKALKRMLKKLGESKSMVECKVMISRFDL 124

Query: 127 NGDGLISFEEFQIMM 141
           NGDG++SFEEF+IMM
Sbjct: 125 NGDGMLSFEEFRIMM 139

[Close]
BLAST of Cp4.1LG04g16040 vs. NCBI nr
Match: gi|734356349|gb|KHN14097.1| (Putative calcium-binding protein CML31 [Glycine soja])

HSP 1 Score: 207.6 bits (527), Expect = 1.4e-50
Identity = 99/135 (73.33%), Postives = 117/135 (86.67%), Query Frame = 1 

Query: 7   AHYDHVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLLCVGDIE 66
           A Y+ VLRYFDEDGDGKISPSELRNR+ ++GGE++  EAE A+E+LDSDGDGLLC+ D+ 
Sbjct: 4   AEYERVLRYFDEDGDGKISPSELRNRIAMMGGEVMLKEAEMAIEALDSDGDGLLCLDDLM 63

Query: 67  RLLDV-GEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRFDL 126
            L++  GEEE LKDLREAF +YD E CGFITPK+LKRMLKKLGE+KS  ECKVMI RFDL
Sbjct: 64  NLMEAAGEEENLKDLREAFDMYDTERCGFITPKALKRMLKKLGESKSMVECKVMISRFDL 123

Query: 127 NGDGLISFEEFQIMM 141
           NGDG++SFEEF+IMM
Sbjct: 124 NGDGMLSFEEFRIMM 138

[Close]
BLAST of Cp4.1LG04g16040 vs. NCBI nr
Match: gi|571453757|ref|XP_006579596.1| (PREDICTED: putative calcium-binding protein CML19 [Glycine max])

HSP 1 Score: 204.1 bits (518), Expect = 1.6e-49
Identity = 98/133 (73.68%), Postives = 117/133 (87.97%), Query Frame = 1 

Query: 9   YDHVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLLCVGDIERL 68
           Y+ VLRYFDEDGDGKISPSELRNR+ ++GGE++  EAE A+E+LDSD DGLLC+ D+ +L
Sbjct: 7   YERVLRYFDEDGDGKISPSELRNRISMMGGEVMLKEAEMAIEALDSDCDGLLCLEDLMKL 66

Query: 69  LDV-GEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRFDLNG 128
           ++  GEEEKLKDLREAF +YD E CGFITPK+LKRMLKKLGE+KS  ECKVMI RFDLNG
Sbjct: 67  MEAAGEEEKLKDLREAFNMYDMERCGFITPKALKRMLKKLGESKSMDECKVMISRFDLNG 126

Query: 129 DGLISFEEFQIMM 141
           DG++SFEEF+IMM
Sbjct: 127 DGMLSFEEFRIMM 139

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g16040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CML31_ORYSJ2.0e-2851.15Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica GN=CML31 ... [more]
CML19_ORYSJ2.0e-2850.35Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica GN=CML19 ... [more]
CML38_ARATH2.0e-2851.54Calcium-binding protein CML38 OS=Arabidopsis thaliana GN=CML38 PE=2 SV=1[more]
CML39_ARATH1.1e-2647.37Calcium-binding protein CML39 OS=Arabidopsis thaliana GN=CML39 PE=2 SV=1[more]
CML37_ARATH1.2e-2546.97Calcium-binding protein CML37 OS=Arabidopsis thaliana GN=CML37 PE=2 SV=1[more]
BLAST of Cp4.1LG04g16040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LU40_CUCSA1.1e-6287.05Uncharacterized protein OS=Cucumis sativus GN=Csa_1G002110 PE=4 SV=1[more]
I1MUN9_SOYBN2.6e-5174.07Uncharacterized protein OS=Glycine max GN=GLYMA_17G128900 PE=4 SV=1[more]
A0A0B2Q2P5_GLYSO9.9e-5173.33Putative calcium-binding protein CML31 OS=Glycine soja GN=glysoja_033324 PE=4 SV... [more]
A0A0R0JW45_SOYBN1.1e-4973.68Uncharacterized protein OS=Glycine max GN=GLYMA_05G047100 PE=4 SV=1[more]
A0A0B2RMN6_GLYSO1.1e-4973.68Putative calcium-binding protein CML31 OS=Glycine soja GN=glysoja_016738 PE=4 SV... [more]
BLAST of Cp4.1LG04g16040 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G76650.11.1e-2951.54 calmodulin-like 38[more]
AT1G76640.16.1e-2847.37 Calcium-binding EF-hand family protein[more]
AT5G42380.16.8e-2746.97 calmodulin like 37[more]
AT3G50770.12.3e-2240.44 calmodulin-like 41[more]
AT5G37770.14.3e-2136.76 EF hand calcium-binding protein family[more]
BLAST of Cp4.1LG04g16040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659128944|ref|XP_008464450.1|9.5e-6387.32PREDICTED: putative calcium-binding protein CML19 [Cucumis melo][more]
gi|449440564|ref|XP_004138054.1|1.6e-6287.05PREDICTED: putative calcium-binding protein CML19 [Cucumis sativus][more]
gi|356563192|ref|XP_003549848.1|3.7e-5174.07PREDICTED: putative calcium-binding protein CML19 [Glycine max][more]
gi|734356349|gb|KHN14097.1|1.4e-5073.33Putative calcium-binding protein CML31 [Glycine soja][more]
gi|571453757|ref|XP_006579596.1|1.6e-4973.68PREDICTED: putative calcium-binding protein CML19 [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
IPR002048EF_hand_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0044237 cellular metabolic process
biological_process GO:0071229 cellular response to acid chemical
biological_process GO:0071310 cellular response to organic substance
biological_process GO:1901701 cellular response to oxygen-containing compound
biological_process GO:0098542 defense response to other organism
biological_process GO:0045087 innate immune response
biological_process GO:0071704 organic substance metabolic process
biological_process GO:0031347 regulation of defense response
biological_process GO:0007165 signal transduction
biological_process GO:0044710 single-organism metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g16040.1Cp4.1LG04g16040.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 12..31
score: 7.
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 78..140
score: 5.5
IPR002048EF-hand domainSMARTSM00054efh_1coord: 115..141
score: 0.078coord: 8..36
score: 0.17coord: 79..107
score:
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 75..110
score: 11.473coord: 40..74
score: 6.228coord: 111..141
score: 14.262coord: 4..39
score: 12
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 10..53
score: 5.4E-10coord: 54..140
score: 8.0
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 12..140
score: 2.55
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 53..65
score: -coord: 17..29
score: -coord: 124..136
scor
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 1..140
score: 3.0
NoneNo IPR availablePANTHERPTHR10891:SF621SUBFAMILY NOT NAMEDcoord: 1..140
score: 3.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g16040Cucsa.157410Cucumber (Gy14) v1cgycpeB0422
Cp4.1LG04g16040CmaCh10G000700Cucurbita maxima (Rimu)cmacpeB094
Cp4.1LG04g16040CmaCh11G014910Cucurbita maxima (Rimu)cmacpeB152
Cp4.1LG04g16040CmaCh11G000410Cucurbita maxima (Rimu)cmacpeB155
Cp4.1LG04g16040CmoCh10G000650Cucurbita moschata (Rifu)cmocpeB070
Cp4.1LG04g16040CmoCh11G016280Cucurbita moschata (Rifu)cmocpeB131
Cp4.1LG04g16040CmoCh11G000420Cucurbita moschata (Rifu)cmocpeB129
Cp4.1LG04g16040Cla019269Watermelon (97103) v1cpewmB679
Cp4.1LG04g16040Csa1G002110Cucumber (Chinese Long) v2cpecuB653
Cp4.1LG04g16040Csa3G588520Cucumber (Chinese Long) v2cpecuB676
Cp4.1LG04g16040MELO3C026214Melon (DHL92) v3.5.1cpemeB615
Cp4.1LG04g16040ClCG06G017800Watermelon (Charleston Gray)cpewcgB616
Cp4.1LG04g16040CSPI03G25670Wild cucumber (PI 183967)cpecpiB679
Cp4.1LG04g16040CSPI01G00620Wild cucumber (PI 183967)cpecpiB656
Cp4.1LG04g16040Lsi06G016340Bottle gourd (USVL1VR-Ls)cpelsiB556
Cp4.1LG04g16040MELO3C026214.2Melon (DHL92) v3.6.1cpemedB727
Cp4.1LG04g16040CsaV3_3G027200Cucumber (Chinese Long) v3cpecucB0844
Cp4.1LG04g16040CsaV3_1G000650Cucumber (Chinese Long) v3cpecucB0814
Cp4.1LG04g16040Bhi02G000399Wax gourdcpewgoB0898
Cp4.1LG04g16040Bhi01G001594Wax gourdcpewgoB0842
Cp4.1LG04g16040CsGy3G024090Cucumber (Gy14) v2cgybcpeB421
Cp4.1LG04g16040CsGy1G000630Cucumber (Gy14) v2cgybcpeB126
Cp4.1LG04g16040Carg20175Silver-seed gourdcarcpeB1458
Cp4.1LG04g16040Carg10289Silver-seed gourdcarcpeB0514
Cp4.1LG04g16040Carg15572Silver-seed gourdcarcpeB0520
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG04g16040Cp4.1LG18g08810Cucurbita pepo (Zucchini)cpecpeB361
Cp4.1LG04g16040Cp4.1LG04g05890Cucurbita pepo (Zucchini)cpecpeB491
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g16040Cucumber (Gy14) v2cgybcpeB123
Cp4.1LG04g16040Melon (DHL92) v3.6.1cpemedB713
Cp4.1LG04g16040Silver-seed gourdcarcpeB0699
Cp4.1LG04g16040Silver-seed gourdcarcpeB1402
Cp4.1LG04g16040Cucumber (Chinese Long) v3cpecucB0808
Cp4.1LG04g16040Wax gourdcpewgoB0870
Cp4.1LG04g16040Cucurbita pepo (Zucchini)cpecpeB443
Cp4.1LG04g16040Cucurbita maxima (Rimu)cmacpeB247
Cp4.1LG04g16040Cucurbita maxima (Rimu)cmacpeB288
Cp4.1LG04g16040Cucurbita moschata (Rifu)cmocpeB213
Cp4.1LG04g16040Cucurbita moschata (Rifu)cmocpeB250
Cp4.1LG04g16040Cucurbita moschata (Rifu)cmocpeB410
Cp4.1LG04g16040Wild cucumber (PI 183967)cpecpiB652
Cp4.1LG04g16040Cucumber (Chinese Long) v2cpecuB648
Cp4.1LG04g16040Bottle gourd (USVL1VR-Ls)cpelsiB538
Cp4.1LG04g16040Watermelon (Charleston Gray)cpewcgB602
Cp4.1LG04g16040Watermelon (97103) v1cpewmB646
Cp4.1LG04g16040Melon (DHL92) v3.5.1cpemeB603