Carg10289 (gene) Silver-seed gourd

Overview
NameCarg10289
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCalcium-binding protein
LocationCucurbita_argyrosperma_scaffold_047 : 253572 .. 254060 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTGAATTGACCAAACATCCAAACTCGAGAAAATCCGAAATTTTCCAATCTCGAATCGAAATGGAAATCAACAGTTCGGCACAGTACGGTCGTGTGTTGAGTTACTTCGACGAAGATGGAGACGGCAAGATCTCGCCGTCGGAGCTGAGGAATCGGGTCGGATTGATGGGCGGAGAGCTGCTGCTGGGGGAAGCGGAGATGGCGGTGGAGTCGCTCGACTCGGACGGCGACGGGTTGCTGTGCGCGGGCGATTTCGAACGGCTTCTGGACGTGGGGGAGGAGGAGAAATTGAAGGATTTGAAAGAGGCGTTTGGTCTGTACGATTGCGAAGGTTGCGGGTTCATAACTCCGAAGAGCTTGAAGAGAATGCTGAGAAAATTGGGGGAATCGAAGTCCACAGCAGAGTGCAAGTTGATGATCGGTCAGTTTGATTTGAACGGGGATGGTTTGATTAGCTTTGAGGAGTTTCAGATAATGATGGCGTAA

mRNA sequence

ATGCCTGAATTGACCAAACATCCAAACTCGAGAAAATCCGAAATTTTCCAATCTCGAATCGAAATGGAAATCAACAGTTCGGCACAGTACGGTCGTGTGTTGAGTTACTTCGACGAAGATGGAGACGGCAAGATCTCGCCGTCGGAGCTGAGGAATCGGGTCGGATTGATGGGCGGAGAGCTGCTGCTGGGGGAAGCGGAGATGGCGGTGGAGTCGCTCGACTCGGACGGCGACGGGTTGCTGTGCGCGGGCGATTTCGAACGGCTTCTGGACGTGGGGGAGGAGGAGAAATTGAAGGATTTGAAAGAGGCGTTTGGTCTGTACGATTGCGAAGGTTGCGGGTTCATAACTCCGAAGAGCTTGAAGAGAATGCTGAGAAAATTGGGGGAATCGAAGTCCACAGCAGAGTGCAAGTTGATGATCGGTCAGTTTGATTTGAACGGGGATGGTTTGATTAGCTTTGAGGAGTTTCAGATAATGATGGCGTAA

Coding sequence (CDS)

ATGCCTGAATTGACCAAACATCCAAACTCGAGAAAATCCGAAATTTTCCAATCTCGAATCGAAATGGAAATCAACAGTTCGGCACAGTACGGTCGTGTGTTGAGTTACTTCGACGAAGATGGAGACGGCAAGATCTCGCCGTCGGAGCTGAGGAATCGGGTCGGATTGATGGGCGGAGAGCTGCTGCTGGGGGAAGCGGAGATGGCGGTGGAGTCGCTCGACTCGGACGGCGACGGGTTGCTGTGCGCGGGCGATTTCGAACGGCTTCTGGACGTGGGGGAGGAGGAGAAATTGAAGGATTTGAAAGAGGCGTTTGGTCTGTACGATTGCGAAGGTTGCGGGTTCATAACTCCGAAGAGCTTGAAGAGAATGCTGAGAAAATTGGGGGAATCGAAGTCCACAGCAGAGTGCAAGTTGATGATCGGTCAGTTTGATTTGAACGGGGATGGTTTGATTAGCTTTGAGGAGTTTCAGATAATGATGGCGTAA

Protein sequence

MPELTKHPNSRKSEIFQSRIEMEINSSAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVESLDSDGDGLLCAGDFERLLDVGEEEKLKDLKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQFDLNGDGLISFEEFQIMMA
Homology
[Close]
BLAST of Carg10289 vs. NCBI nr
Match: XP_022921811.1 (putative calcium-binding protein CML19 [Cucurbita moschata])

HSP 1 Score: 295.8 bits (756), Expect = 8.8e-77
Identity = 160/162 (98.77%), Postives = 162/162 (100.00%), Query Frame = 0 

Query: 1   MPELTKHPNSRKSEIFQSRIEMEINSSAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGE 60
           MPELTKHPNSRKSE+FQSRIEMEIN+SAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGE
Sbjct: 4   MPELTKHPNSRKSEVFQSRIEMEINNSAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGE 63

Query: 61  LLLGEAEMAVESLDSDGDGLLCAGDFERLXXXXXXXXXXXXKEAFGLYDCEGCGFITPKS 120
           LLLGEAEMAVESLDSDGDGLLCAGDFERLXXXXXXXXXXXXKEAFGLYDCEGCGFITPKS
Sbjct: 64  LLLGEAEMAVESLDSDGDGLLCAGDFERLXXXXXXXXXXXXKEAFGLYDCEGCGFITPKS 123

Query: 121 LKRMLRKLGESKSTAECKLMIGQFDLNGDGLISFEEFQIMMA 163
           LKRMLRKLGESKSTAECKLMIGQFDLNGDGLISFEEFQIMMA
Sbjct: 124 LKRMLRKLGESKSTAECKLMIGQFDLNGDGLISFEEFQIMMA 165

[Close]
BLAST of Carg10289 vs. NCBI nr
Match: XP_023516478.1 (probable calcium-binding protein CML31 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 254.2 bits (648), Expect = 2.9e-64
Identity = 129/141 (91.49%), Postives = 131/141 (92.91%), Query Frame = 0 

Query: 22  MEINSSAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVESLDSDGDGLL 81
           MEIN+SAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAV+SLDSDGDGLL
Sbjct: 1   MEINNSAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVQSLDSDGDGLL 60

Query: 82  CAGDFERLXXXXXXXXXXXXKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMI 141
           CAGDFERL      XX    KEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMI
Sbjct: 61  CAGDFERLLDVGEEXXLNDLKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMI 120

Query: 142 GQFDLNGDGLISFEEFQIMMA 163
           GQFDLNGDGLISFEEFQIMMA
Sbjct: 121 GQFDLNGDGLISFEEFQIMMA 141

[Close]
BLAST of Carg10289 vs. NCBI nr
Match: XP_022987451.1 (putative calcium-binding protein CML19 [Cucurbita maxima])

HSP 1 Score: 243.8 bits (621), Expect = 4.0e-61
Identity = 123/141 (87.23%), Postives = 124/141 (87.94%), Query Frame = 0 

Query: 22  MEINSSAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVESLDSDGDGLL 81
           MEINSSA YGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVESLDSDGDGLL
Sbjct: 1   MEINSSAHYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVESLDSDGDGLL 60

Query: 82  CAGDFERLXXXXXXXXXXXXKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMI 141
           CAGDFERL            KEAF LYDCEGCGFITPKSLK+MLRKLGE KSTAECKLMI
Sbjct: 61  CAGDFERLLEVGEEEKLKDLKEAFALYDCEGCGFITPKSLKKMLRKLGERKSTAECKLMI 120

Query: 142 GQFDLNGDGLISFEEFQIMMA 163
           G FDLNGDGLISFEEFQ MMA
Sbjct: 121 GVFDLNGDGLISFEEFQKMMA 141

[Close]
BLAST of Carg10289 vs. NCBI nr
Match: XP_008464450.1 (PREDICTED: putative calcium-binding protein CML19 [Cucumis melo])

HSP 1 Score: 218.0 bits (554), Expect = 2.3e-53
Identity = 112/142 (78.87%), Postives = 118/142 (83.10%), Query Frame = 0 

Query: 22  MEIN-SSAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVESLDSDGDGL 81
           MEIN S AQY RVLSYFDEDGDGKISPSELRNR+GL+GGELL  EAE AVESLDSDGDGL
Sbjct: 1   MEINKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGL 60

Query: 82  LCAGDFERLXXXXXXXXXXXXKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLM 141
           LCAGD ERL            KEAF LYD EGCGFITPK+LK+MLRKLGE KST ECK+M
Sbjct: 61  LCAGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 120

Query: 142 IGQFDLNGDGLISFEEFQIMMA 163
           I +FDLNGDGLISFEEFQIMMA
Sbjct: 121 IRRFDLNGDGLISFEEFQIMMA 142

[Close]
BLAST of Carg10289 vs. NCBI nr
Match: XP_004138054.1 (PREDICTED: putative calcium-binding protein CML19 [Cucumis sativus] >KGN63491.1 hypothetical protein Csa_1G002110 [Cucumis sativus])

HSP 1 Score: 212.2 bits (539), Expect = 1.3e-51
Identity = 111/139 (79.86%), Postives = 118/139 (84.89%), Query Frame = 0 

Query: 24  INSSAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVESLDSDGDGLLCA 83
           + S AQY RVLSYFDEDGDGKISPSELRNR+GL+GGEL   EAE AVESLDSDGDGLLC 
Sbjct: 4   VKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCV 63

Query: 84  GDFERLXXXXXXXXXXXXKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQ 143
           GD ERL   XXXXX    KEAF LYD EGCGFITPK+LK+MLRKLGE KST ECK+MI +
Sbjct: 64  GDIERLLEVXXXXXLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRR 123

Query: 144 FDLNGDGLISFEEFQIMMA 163
           FDLNGDGLISFEEFQIMMA
Sbjct: 124 FDLNGDGLISFEEFQIMMA 142

[Close]
BLAST of Carg10289 vs. TAIR10
Match: AT1G76650.1 (calmodulin-like 38)

HSP 1 Score: 110.2 bits (274), Expect = 1.2e-24
Identity = 61/130 (46.92%), Postives = 81/130 (62.31%), Query Frame = 0 

Query: 33  VLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVESLDSDGDGLLCAGDFERL-XX 92
           V SY D + DG+ISP EL+     +G +L   EA  AV   D+DGDG+L   +F +L   
Sbjct: 47  VFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLIKV 106

Query: 93  XXXXXXXXXXKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQFDLNGDGL 152
                     K AF LY  EG   ITP+SLK ML+KLGES++T +C++MI  FDLN DG+
Sbjct: 107 DDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNADGV 166

Query: 153 ISFEEFQIMM 162
           +SF+EF +MM
Sbjct: 167 LSFDEFALMM 176

[Close]
BLAST of Carg10289 vs. TAIR10
Match: AT1G76640.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 104.8 bits (260), Expect = 5.2e-23
Identity = 59/133 (44.36%), Postives = 79/133 (59.40%), Query Frame = 0 

Query: 33  VLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVESLDSDGDGLLCAGDFERLXXX 92
           V +Y D + DG+IS  EL+     +G ++   EAE AV+  D DGDG+L   +F  L   
Sbjct: 26  VFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALLIKG 85

Query: 93  XXXXXXXXXK----EAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQFDLNG 152
                    K    EAF +Y  +G   ITP SLK ML KLGES++T +CK+MI  FDLN 
Sbjct: 86  NDEFTEEEKKRKIMEAFRMYIADGEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFDLNA 145

Query: 153 DGLISFEEFQIMM 162
           DG++SF+EF +MM
Sbjct: 146 DGVLSFDEFALMM 158

[Close]
BLAST of Carg10289 vs. TAIR10
Match: AT5G42380.1 (calmodulin like 37)

HSP 1 Score: 102.1 bits (253), Expect = 3.4e-22
Identity = 67/174 (38.51%), Postives = 92/174 (52.87%), Query Frame = 0 

Query: 1   MPELTKHPNSRKSEIFQSRIEMEINSSAQYG----------RVLSYFDEDGDGKISPSEL 60
           +  L K  +S++SE  ++  +    SS   G           V  Y D + DGKIS  EL
Sbjct: 11  LSRLYKKVSSKRSESSRNLEDESRTSSNSSGSSSLNVNELRTVFDYMDANSDGKISGEEL 70

Query: 61  RNRVGLMGGELLLGEAEMAVESLDSDGDGLLCAGDFERL---XXXXXXXXXXXXKEAFGL 120
           ++ V L+GG L   E E  V++ D DGDG +   +F +L               KEAFG+
Sbjct: 71  QSCVSLLGGALSSREVEEVVKTSDVDGDGFIDFEEFLKLMEGEDGSDEERRKELKEAFGM 130

Query: 121 YDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQFDLNGDGLISFEEFQIMM 162
           Y  EG  FIT  SL+R L +LGES +   CK+MI  FD N DG++SF+EF +MM
Sbjct: 131 YVMEGEEFITAASLRRTLSRLGESCTVDACKVMIRGFDQNDDGVLSFDEFVLMM 184

[Close]
BLAST of Carg10289 vs. TAIR10
Match: AT3G50770.1 (calmodulin-like 41)

HSP 1 Score: 97.4 bits (241), Expect = 8.4e-21
Identity = 57/143 (39.86%), Postives = 82/143 (57.34%), Query Frame = 0 

Query: 26  SSAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVESLDSDGDGLLCAGD 85
           S  +  +V S+FD DGDGKIS  ELR+  G +G  +    A+ A+  +D+D DG L   D
Sbjct: 61  SKEELRQVFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFED 120

Query: 86  F------ERLXXXXXXXXXXXXKEAFGLYDCE-GCGFITPKSLKRMLRKLGESKSTAECK 145
           F        L            K AF +++ E G G ITPK L++ML KLGES++  EC+
Sbjct: 121 FVGLMTRRDLYGDGEVDGDGELKTAFEMFEVEKGSGCITPKGLQKMLVKLGESRTYGECE 180

Query: 146 LMIGQFDLNGDGLISFEEFQIMM 162
            MI  +D++G+G++ F EF+ MM
Sbjct: 181 AMIKFYDIDGNGILDFHEFRQMM 203

[Close]
BLAST of Carg10289 vs. TAIR10
Match: AT1G24620.1 (EF hand calcium-binding protein family)

HSP 1 Score: 92.0 bits (227), Expect = 3.5e-19
Identity = 54/131 (41.22%), Postives = 72/131 (54.96%), Query Frame = 0 

Query: 33  VLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVESLDSDGDGLLCAGDFERL--X 92
           V   FD +GDGKIS  EL   +  +G E+   E E A+  +D  GDG +   +F  L   
Sbjct: 41  VFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFVELNTK 100

Query: 93  XXXXXXXXXXXKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQFDLNGDG 152
                      K+AF +YD +G G I+ + L  +LR LG+  S AEC+ MIG  D +GDG
Sbjct: 101 GMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECSIAECRKMIGGVDKDGDG 160

Query: 153 LISFEEFQIMM 162
            I FEEF+IMM
Sbjct: 161 TIDFEEFKIMM 171

[Close]
BLAST of Carg10289 vs. Swiss-Prot
Match: sp|Q8RYJ8|CML19_ORYSJ (Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica OX=39947 GN=CML19 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 9.1e-25
Identity = 67/143 (46.85%), Postives = 88/143 (61.54%), Query Frame = 0 

Query: 24  INSSAQYGRVLSYFDEDGDGKISPSELRNRV-GLMGGELLLGEAEMAVESLDSDGDGLLC 83
           + ++A++ RV S FD D DGKIS +ELR  +   +G ++   EAE  V S D+D DGLL 
Sbjct: 2   VAATAEFRRVFSAFDRDADGKISAAELRLCMKAALGEDMSAEEAEALVSSADTDDDGLLD 61

Query: 84  AGDFER----LXXXXXXXXXXXXKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECK 143
             +F +    L             EAF +Y+ EG G ITP SLKRML KLG  +   EC+
Sbjct: 62  EEEFTKLAVQLEMGDEEERCRGLMEAFRMYEMEGEGRITPASLKRMLSKLGSHQGIEECQ 121

Query: 144 LMIGQFDLNGDGLISFEEFQIMM 162
            MI +FDL+GDG+ISFEEF+IMM
Sbjct: 122 TMICRFDLDGDGVISFEEFKIMM 144

[Close]
BLAST of Carg10289 vs. Swiss-Prot
Match: sp|Q9SRE6|CML38_ARATH (Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.2e-23
Identity = 61/130 (46.92%), Postives = 81/130 (62.31%), Query Frame = 0 

Query: 33  VLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVESLDSDGDGLLCAGDFERL-XX 92
           V SY D + DG+ISP EL+     +G +L   EA  AV   D+DGDG+L   +F +L   
Sbjct: 47  VFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLIKV 106

Query: 93  XXXXXXXXXXKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQFDLNGDGL 152
                     K AF LY  EG   ITP+SLK ML+KLGES++T +C++MI  FDLN DG+
Sbjct: 107 DDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNADGV 166

Query: 153 ISFEEFQIMM 162
           +SF+EF +MM
Sbjct: 167 LSFDEFALMM 176

[Close]
BLAST of Carg10289 vs. Swiss-Prot
Match: sp|Q8RYJ9|CML23_ORYSJ (Putative calcium-binding protein CML23 OS=Oryza sativa subsp. japonica OX=39947 GN=CML23 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.9e-22
Identity = 74/147 (50.34%), Postives = 95/147 (64.63%), Query Frame = 0 

Query: 26  SSAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVESL-DSDGDGLLCAG 85
           +S ++ RV   FD+DGDGKIS +ELR  V    GE +  E   A+ +L D+DGDGLL   
Sbjct: 3   ASDEFRRVFGSFDQDGDGKISATELRLCVKASLGEDMPDEEVQALMALADTDGDGLLDEE 62

Query: 86  DFERL----------XXXXXXXXXXXXKEAFGLYDCEGCGFITPKSLKRMLRKLGESKST 145
           +F RL          XXXXXXXXX   +EAF +Y+ EG G ITP SLK ML KLG     
Sbjct: 63  EFVRLVTEMXXXXXXXXXXXXXXXRCLREAFAMYEMEGRGCITPLSLKLMLSKLGTHLDV 122

Query: 146 AECKLMIGQFDLNGDGLISFEEFQIMM 162
           AEC+ MI +FD+NGDG+++F+EF+ MM
Sbjct: 123 AECQAMICRFDMNGDGVLTFDEFKTMM 149

[Close]
BLAST of Carg10289 vs. Swiss-Prot
Match: sp|Q9SRE7|CML39_ARATH (Calcium-binding protein CML39 OS=Arabidopsis thaliana OX=3702 GN=CML39 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 9.4e-22
Identity = 59/133 (44.36%), Postives = 79/133 (59.40%), Query Frame = 0 

Query: 33  VLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVESLDSDGDGLLCAGDFERLXXX 92
           V +Y D + DG+IS  EL+     +G ++   EAE AV+  D DGDG+L   +F  L   
Sbjct: 26  VFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALLIKG 85

Query: 93  XXXXXXXXXK----EAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQFDLNG 152
                    K    EAF +Y  +G   ITP SLK ML KLGES++T +CK+MI  FDLN 
Sbjct: 86  NDEFTEEEKKRKIMEAFRMYIADGEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFDLNA 145

Query: 153 DGLISFEEFQIMM 162
           DG++SF+EF +MM
Sbjct: 146 DGVLSFDEFALMM 158

[Close]
BLAST of Carg10289 vs. Swiss-Prot
Match: sp|Q9FIH9|CML37_ARATH (Calcium-binding protein CML37 OS=Arabidopsis thaliana OX=3702 GN=CML37 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 6.1e-21
Identity = 67/174 (38.51%), Postives = 92/174 (52.87%), Query Frame = 0 

Query: 1   MPELTKHPNSRKSEIFQSRIEMEINSSAQYG----------RVLSYFDEDGDGKISPSEL 60
           +  L K  +S++SE  ++  +    SS   G           V  Y D + DGKIS  EL
Sbjct: 11  LSRLYKKVSSKRSESSRNLEDESRTSSNSSGSSSLNVNELRTVFDYMDANSDGKISGEEL 70

Query: 61  RNRVGLMGGELLLGEAEMAVESLDSDGDGLLCAGDFERL---XXXXXXXXXXXXKEAFGL 120
           ++ V L+GG L   E E  V++ D DGDG +   +F +L               KEAFG+
Sbjct: 71  QSCVSLLGGALSSREVEEVVKTSDVDGDGFIDFEEFLKLMEGEDGSDEERRKELKEAFGM 130

Query: 121 YDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQFDLNGDGLISFEEFQIMM 162
           Y  EG  FIT  SL+R L +LGES +   CK+MI  FD N DG++SF+EF +MM
Sbjct: 131 YVMEGEEFITAASLRRTLSRLGESCTVDACKVMIRGFDQNDDGVLSFDEFVLMM 184

[Close]
BLAST of Carg10289 vs. TrEMBL
Match: tr|A0A1S3CN12|A0A1S3CN12_CUCME (putative calcium-binding protein CML19 OS=Cucumis melo OX=3656 GN=LOC103502330 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.5e-53
Identity = 112/142 (78.87%), Postives = 118/142 (83.10%), Query Frame = 0 

Query: 22  MEIN-SSAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVESLDSDGDGL 81
           MEIN S AQY RVLSYFDEDGDGKISPSELRNR+GL+GGELL  EAE AVESLDSDGDGL
Sbjct: 1   MEINKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGL 60

Query: 82  LCAGDFERLXXXXXXXXXXXXKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLM 141
           LCAGD ERL            KEAF LYD EGCGFITPK+LK+MLRKLGE KST ECK+M
Sbjct: 61  LCAGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 120

Query: 142 IGQFDLNGDGLISFEEFQIMMA 163
           I +FDLNGDGLISFEEFQIMMA
Sbjct: 121 IRRFDLNGDGLISFEEFQIMMA 142

[Close]
BLAST of Carg10289 vs. TrEMBL
Match: tr|A0A0A0LU40|A0A0A0LU40_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002110 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 8.5e-52
Identity = 111/139 (79.86%), Postives = 118/139 (84.89%), Query Frame = 0 

Query: 24  INSSAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVESLDSDGDGLLCA 83
           + S AQY RVLSYFDEDGDGKISPSELRNR+GL+GGEL   EAE AVESLDSDGDGLLC 
Sbjct: 4   VKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCV 63

Query: 84  GDFERLXXXXXXXXXXXXKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIGQ 143
           GD ERL   XXXXX    KEAF LYD EGCGFITPK+LK+MLRKLGE KST ECK+MI +
Sbjct: 64  GDIERLLEVXXXXXLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRR 123

Query: 144 FDLNGDGLISFEEFQIMMA 163
           FDLNGDGLISFEEFQIMMA
Sbjct: 124 FDLNGDGLISFEEFQIMMA 142

[Close]
BLAST of Carg10289 vs. TrEMBL
Match: tr|A0A2P6P4Z4|A0A2P6P4Z4_ROSCH (Putative EF-hand domain pair protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0190421 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.0e-41
Identity = 93/139 (66.91%), Postives = 104/139 (74.82%), Query Frame = 0 

Query: 24  INSSAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVESLDSDGDGLLCA 83
           + S+  + RV SYFDEDGDGKISPSELRNR+GLMGGE+L  EAE+AV  LDSDGDGLL  
Sbjct: 1   MQSNRGFERVFSYFDEDGDGKISPSELRNRLGLMGGEMLQNEAEVAVGFLDSDGDGLLGL 60

Query: 84  GDFERL-XXXXXXXXXXXXKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIG 143
            D   L             +EAF +YD EGCGFITPKSLKRML +LGESKS  ECK+MI 
Sbjct: 61  DDLVGLMEGGEEEEKMKGLREAFEVYDEEGCGFITPKSLKRMLNRLGESKSIEECKVMIN 120

Query: 144 QFDLNGDGLISFEEFQIMM 162
           QFDLNGDGLISFEEF +MM
Sbjct: 121 QFDLNGDGLISFEEFTVMM 139

[Close]
BLAST of Carg10289 vs. TrEMBL
Match: tr|M5WYD1|M5WYD1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa019709mg PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.3e-39
Identity = 91/139 (65.47%), Postives = 103/139 (74.10%), Query Frame = 0 

Query: 24  INSSAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVESLDSDGDGLLCA 83
           + S+  + RVLSYFDEDGDGKISPSELR  +G MGGELL  EAE+AVE LDSDGDGLL  
Sbjct: 1   MTSNRGFDRVLSYFDEDGDGKISPSELRRGLGFMGGELLQKEAEVAVELLDSDGDGLLGL 60

Query: 84  GDFERL-XXXXXXXXXXXXKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIG 143
            D   L             ++AF +YD EGCGFITPKSLKRML  LGES+S  ECK+MI 
Sbjct: 61  EDLVCLMEGGEEEEKVKGLRDAFQVYDVEGCGFITPKSLKRMLSSLGESRSIDECKVMIN 120

Query: 144 QFDLNGDGLISFEEFQIMM 162
           QFDLNGDG+ISFEEF+IMM
Sbjct: 121 QFDLNGDGVISFEEFRIMM 139

[Close]
BLAST of Carg10289 vs. TrEMBL
Match: tr|A0A251P8V2|A0A251P8V2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G152700 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.3e-39
Identity = 91/139 (65.47%), Postives = 103/139 (74.10%), Query Frame = 0 

Query: 24  INSSAQYGRVLSYFDEDGDGKISPSELRNRVGLMGGELLLGEAEMAVESLDSDGDGLLCA 83
           + S+  + RVLSYFDEDGDGKISPSELR  +G MGGELL  EAE+AVE LDSDGDGLL  
Sbjct: 1   MKSNRGFDRVLSYFDEDGDGKISPSELRRGLGFMGGELLQKEAEVAVELLDSDGDGLLGL 60

Query: 84  GDFERL-XXXXXXXXXXXXKEAFGLYDCEGCGFITPKSLKRMLRKLGESKSTAECKLMIG 143
            D   L             ++AF +YD EGCGFITPKSLKRML  LGES+S  ECK+MI 
Sbjct: 61  EDLVCLMEGGEEEEKVKGLRDAFQVYDVEGCGFITPKSLKRMLSSLGESRSIDECKVMIN 120

Query: 144 QFDLNGDGLISFEEFQIMM 162
           QFDLNGDG+ISFEEF+IMM
Sbjct: 121 QFDLNGDGVISFEEFRIMM 139

The following BLAST results are available for this feature:
BLAST of Carg10289 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022921811.18.8e-7798.77putative calcium-binding protein CML19 [Cucurbita moschata][more]
XP_023516478.12.9e-6491.49probable calcium-binding protein CML31 [Cucurbita pepo subsp. pepo][more]
XP_022987451.14.0e-6187.23putative calcium-binding protein CML19 [Cucurbita maxima][more]
XP_008464450.12.3e-5378.87PREDICTED: putative calcium-binding protein CML19 [Cucumis melo][more]
XP_004138054.11.3e-5179.86PREDICTED: putative calcium-binding protein CML19 [Cucumis sativus] >KGN63491.1 ... [more]
BLAST of Carg10289 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G76650.11.2e-2446.92calmodulin-like 38[more]
AT1G76640.15.2e-2344.36Calcium-binding EF-hand family protein[more]
AT5G42380.13.4e-2238.51calmodulin like 37[more]
AT3G50770.18.4e-2139.86calmodulin-like 41[more]
AT1G24620.13.5e-1941.22EF hand calcium-binding protein family[more]
BLAST of Carg10289 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8RYJ8|CML19_ORYSJ9.1e-2546.85Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
sp|Q9SRE6|CML38_ARATH2.2e-2346.92Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=2 SV=1[more]
sp|Q8RYJ9|CML23_ORYSJ1.9e-2250.34Putative calcium-binding protein CML23 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
sp|Q9SRE7|CML39_ARATH9.4e-2244.36Calcium-binding protein CML39 OS=Arabidopsis thaliana OX=3702 GN=CML39 PE=2 SV=1[more]
sp|Q9FIH9|CML37_ARATH6.1e-2138.51Calcium-binding protein CML37 OS=Arabidopsis thaliana OX=3702 GN=CML37 PE=2 SV=1[more]
BLAST of Carg10289 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CN12|A0A1S3CN12_CUCME1.5e-5378.87putative calcium-binding protein CML19 OS=Cucumis melo OX=3656 GN=LOC103502330 P... [more]
tr|A0A0A0LU40|A0A0A0LU40_CUCSA8.5e-5279.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002110 PE=4 SV=1[more]
tr|A0A2P6P4Z4|A0A2P6P4Z4_ROSCH3.0e-4166.91Putative EF-hand domain pair protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7... [more]
tr|M5WYD1|M5WYD1_PRUPE1.3e-3965.47Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa019709mg PE=4 SV=1[more]
tr|A0A251P8V2|A0A251P8V2_PRUPE1.3e-3965.47Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G152700 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg10289-RACarg10289-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 65..93
e-value: 59.0
score: 3.5
coord: 100..128
e-value: 0.27
score: 20.3
coord: 136..162
e-value: 1.1
score: 17.3
coord: 29..57
e-value: 1.2
score: 17.2
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 35..52
e-value: 4.2E-5
score: 22.8
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 99..161
e-value: 7.4E-13
score: 48.7
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 132..162
score: 12.672
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 61..95
score: 5.894
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 25..60
score: 11.25
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 96..131
score: 10.775
IPR002048EF-hand domainCDDcd00051EFhcoord: 100..162
e-value: 1.72223E-13
score: 61.0245
NoneNo IPR availableGENE3DG3DSA:1.10.238.10coord: 92..162
e-value: 1.0E-20
score: 75.7
NoneNo IPR availableGENE3DG3DSA:1.10.238.10coord: 1..91
e-value: 1.5E-9
score: 40.0
NoneNo IPR availablePANTHERPTHR43996FAMILY NOT NAMEDcoord: 27..161
NoneNo IPR availablePANTHERPTHR43996:SF8SUBFAMILY NOT NAMEDcoord: 27..161
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 145..157
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 38..50
IPR011992EF-hand domain pairSUPERFAMILYSSF47473EF-handcoord: 25..161

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg10289Cla019269Watermelon (97103) v1carwmB0356
Carg10289Csa1G002110Cucumber (Chinese Long) v2carcuB0391
Carg10289MELO3C026214Melon (DHL92) v3.5.1carmeB0369
Carg10289ClCG06G017800Watermelon (Charleston Gray)carwcgB0357
Carg10289CSPI01G00620Wild cucumber (PI 183967)carcpiB0396
Carg10289Cucsa.157410Cucumber (Gy14) v1carcgyB0422
Carg10289CmaCh11G000410Cucurbita maxima (Rimu)carcmaB0511
Carg10289CmaCh10G000700Cucurbita maxima (Rimu)carcmaB0510
Carg10289CmoCh11G000420Cucurbita moschata (Rifu)carcmoB0494
Carg10289CmoCh10G000650Cucurbita moschata (Rifu)carcmoB0493
Carg10289Lsi06G016340Bottle gourd (USVL1VR-Ls)carlsiB331
Carg10289Cp4.1LG18g08810Cucurbita pepo (Zucchini)carcpeB0508
Carg10289Cp4.1LG04g16040Cucurbita pepo (Zucchini)carcpeB0514
Carg10289CsGy1G000630Cucumber (Gy14) v2carcgybB0371
Carg10289MELO3C026214.2Melon (DHL92) v3.6.1carmedB0375
Carg10289CsaV3_1G000650Cucumber (Chinese Long) v3carcucB0395
Carg10289Cla97C05G094910Watermelon (97103) v2carwmbB0381
Carg10289Cla97C06G127530Watermelon (97103) v2carwmbB0382
Carg10289Bhi02G000399Wax gourdcarwgoB0447
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg10289Carg15572Silver-seed gourdcarcarB387
Carg10289Carg20175Silver-seed gourdcarcarB396
The following block(s) are covering this gene:
GeneOrganismBlock
Carg10289Wild cucumber (PI 183967)carcpiB0398
Carg10289Cucumber (Chinese Long) v2carcuB0393
Carg10289Cucumber (Chinese Long) v3carcucB0397
Carg10289Bottle gourd (USVL1VR-Ls)carlsiB330
Carg10289Melon (DHL92) v3.5.1carmeB0366
Carg10289Melon (DHL92) v3.6.1carmedB0372
Carg10289Watermelon (Charleston Gray)carwcgB0356
Carg10289Watermelon (97103) v1carwmB0354
Carg10289Watermelon (97103) v2carwmbB0379
Carg10289Wax gourdcarwgoB0445
Carg10289Silver-seed gourdcarcarB388
Carg10289Silver-seed gourdcarcarB390
Carg10289Silver-seed gourdcarcarB395
Carg10289Cucumber (Gy14) v2carcgybB0373
Carg10289Cucumber (Gy14) v1carcgyB0424
Carg10289Cucurbita maxima (Rimu)carcmaB0513
Carg10289Cucurbita maxima (Rimu)carcmaB0515
Carg10289Cucurbita moschata (Rifu)carcmoB0495
Carg10289Cucurbita moschata (Rifu)carcmoB0497
Carg10289Cucurbita moschata (Rifu)carcmoB0498
Carg10289Cucurbita moschata (Rifu)carcmoB0500
Carg10289Cucurbita pepo (Zucchini)carcpeB0507
Carg10289Cucurbita pepo (Zucchini)carcpeB0510
Carg10289Cucurbita pepo (Zucchini)carcpeB0513