Carg20175 (gene) Silver-seed gourd

Overview
NameCarg20175
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCalcium-binding protein
LocationCucurbita_argyrosperma_scaffold_154 : 43825 .. 44250 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATCACCAGTGCGCGGCACTACGACCGCGTCTTGCGTTACTTCGATGAAGATGGCGACGGCAAAATCTCGCCGTCGGAGCTGAGGAATCGTCTCGGATTGATCGGCGGAGAGCTGCTGCCGGCGGAGGCAGAGGTGGCGGTGGAATCGCTCGACTCCGACGGCGACGGACTGCTCTGCGTCGGTGATATCGAGCGGCTACTGGACGTGGGCGAGGAAGAGAAATTGAAGGACTTGAGAGAGGCTTTCGGATTGTACGATGCCGAAGGCTGCGGGTTCATTACTCCGAAAAGCTTGAAGAGAATGCTTAAAAAATTGGGGGAAACGAAATCCACGGCGGAGTGTAAAGTGATGATTCGCCGCTTCGATTTGAACGGTGACGGTTTGATTAGCTTTGAGGAGTTTCAGATCATGATGGCCTGA

mRNA sequence

ATGGAGATCACCAGTGCGCGGCACTACGACCGCGTCTTGCGTTACTTCGATGAAGATGGCGACGGCAAAATCTCGCCGTCGGAGCTGAGGAATCGTCTCGGATTGATCGGCGGAGAGCTGCTGCCGGCGGAGGCAGAGGTGGCGGTGGAATCGCTCGACTCCGACGGCGACGGACTGCTCTGCGTCGGTGATATCGAGCGGCTACTGGACGTGGGCGAGGAAGAGAAATTGAAGGACTTGAGAGAGGCTTTCGGATTGTACGATGCCGAAGGCTGCGGGTTCATTACTCCGAAAAGCTTGAAGAGAATGCTTAAAAAATTGGGGGAAACGAAATCCACGGCGGAGTGTAAAGTGATGATTCGCCGCTTCGATTTGAACGGTGACGGTTTGATTAGCTTTGAGGAGTTTCAGATCATGATGGCCTGA

Coding sequence (CDS)

ATGGAGATCACCAGTGCGCGGCACTACGACCGCGTCTTGCGTTACTTCGATGAAGATGGCGACGGCAAAATCTCGCCGTCGGAGCTGAGGAATCGTCTCGGATTGATCGGCGGAGAGCTGCTGCCGGCGGAGGCAGAGGTGGCGGTGGAATCGCTCGACTCCGACGGCGACGGACTGCTCTGCGTCGGTGATATCGAGCGGCTACTGGACGTGGGCGAGGAAGAGAAATTGAAGGACTTGAGAGAGGCTTTCGGATTGTACGATGCCGAAGGCTGCGGGTTCATTACTCCGAAAAGCTTGAAGAGAATGCTTAAAAAATTGGGGGAAACGAAATCCACGGCGGAGTGTAAAGTGATGATTCGCCGCTTCGATTTGAACGGTGACGGTTTGATTAGCTTTGAGGAGTTTCAGATCATGATGGCCTGA

Protein sequence

MEITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA
Homology
[Close]
BLAST of Carg20175 vs. NCBI nr
Match: XP_022925940.1 (putative calcium-binding protein CML19 [Cucurbita moschata])

HSP 1 Score: 238.8 bits (608), Expect = 1.1e-59
Identity = 139/141 (98.58%), Postives = 139/141 (98.58%), Query Frame = 0 

Query: 1   MEITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLL 60
           MEITSA HYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAE AVESLDSDGDGLL
Sbjct: 1   MEITSAAHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLL 60

Query: 61  CVGDIXXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMI 120
           CVGDIXXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMI
Sbjct: 61  CVGDIXXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMI 120

Query: 121 RRFDLNGDGLISFEEFQIMMA 142
           RRFDLNGDGLISFEEFQIMMA
Sbjct: 121 RRFDLNGDGLISFEEFQIMMA 141

[Close]
BLAST of Carg20175 vs. NCBI nr
Match: XP_022966390.1 (probable calcium-binding protein CML31 [Cucurbita maxima])

HSP 1 Score: 237.7 bits (605), Expect = 2.5e-59
Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0 

Query: 1   MEITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLL 60
           MEITSA HYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAE AVESLDSDGDGLL
Sbjct: 1   MEITSAAHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLL 60

Query: 61  CVGDIXXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMI 120
           CVGDIXXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMI
Sbjct: 61  CVGDIXXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMI 120

Query: 121 RRFDLNGDGLISFEEFQIMMA 142
           RRFDLNGDGLISF+EFQIMMA
Sbjct: 121 RRFDLNGDGLISFDEFQIMMA 141

[Close]
BLAST of Carg20175 vs. NCBI nr
Match: XP_023529455.1 (probable calcium-binding protein CML31 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236.9 bits (603), Expect = 4.2e-59
Identity = 138/141 (97.87%), Postives = 138/141 (97.87%), Query Frame = 0 

Query: 1   MEITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLL 60
           MEITSA HYD VLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAE AVESLDSDGDGLL
Sbjct: 1   MEITSAAHYDHVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEAAVESLDSDGDGLL 60

Query: 61  CVGDIXXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMI 120
           CVGDIXXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMI
Sbjct: 61  CVGDIXXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMI 120

Query: 121 RRFDLNGDGLISFEEFQIMMA 142
           RRFDLNGDGLISFEEFQIMMA
Sbjct: 121 RRFDLNGDGLISFEEFQIMMA 141

[Close]
BLAST of Carg20175 vs. NCBI nr
Match: XP_008464450.1 (PREDICTED: putative calcium-binding protein CML19 [Cucumis melo])

HSP 1 Score: 208.4 bits (529), Expect = 1.6e-50
Identity = 107/142 (75.35%), Postives = 112/142 (78.87%), Query Frame = 0 

Query: 1   MEIT-SARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGL 60
           MEI  S   YDRVL YFDEDGDGKISPSELRNRLGLIGGELL AEAE AVESLDSDGDGL
Sbjct: 1   MEINKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGL 60

Query: 61  LCVGDIXXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVM 120
           LC GDI                  F LYD+EGCGFITPK+LK+ML+KLGE KST ECK+M
Sbjct: 61  LCAGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 120

Query: 121 IRRFDLNGDGLISFEEFQIMMA 142
           IRRFDLNGDGLISFEEFQIMMA
Sbjct: 121 IRRFDLNGDGLISFEEFQIMMA 142

[Close]
BLAST of Carg20175 vs. NCBI nr
Match: XP_004138054.1 (PREDICTED: putative calcium-binding protein CML19 [Cucumis sativus] >KGN63491.1 hypothetical protein Csa_1G002110 [Cucumis sativus])

HSP 1 Score: 207.6 bits (527), Expect = 2.8e-50
Identity = 109/139 (78.42%), Postives = 115/139 (82.73%), Query Frame = 0 

Query: 3   ITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCV 62
           + S   YDRVL YFDEDGDGKISPSELRNRLGLIGGEL  AEAE AVESLDSDGDGLLCV
Sbjct: 4   VKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCV 63

Query: 63  GDIXXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRR 122
           GDI      XXXXX       F LYD+EGCGFITPK+LK+ML+KLGE KST ECK+MIRR
Sbjct: 64  GDIERLLEVXXXXXLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRR 123

Query: 123 FDLNGDGLISFEEFQIMMA 142
           FDLNGDGLISFEEFQIMMA
Sbjct: 124 FDLNGDGLISFEEFQIMMA 142

[Close]
BLAST of Carg20175 vs. TAIR10
Match: AT1G76650.1 (calmodulin-like 38)

HSP 1 Score: 105.5 bits (262), Expect = 2.7e-23
Identity = 59/135 (43.70%), Postives = 78/135 (57.78%), Query Frame = 0 

Query: 7   RHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDI- 66
           R  + V  Y D + DG+ISP EL+     +G +L   EA  AV   D+DGDG+L   +  
Sbjct: 42  RELEAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFS 101

Query: 67  XXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRFDL 126
                             F LY AEG   ITP+SLK MLKKLGE+++T +C+VMI  FDL
Sbjct: 102 QLIKVDDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDL 161

Query: 127 NGDGLISFEEFQIMM 141
           N DG++SF+EF +MM
Sbjct: 162 NADGVLSFDEFALMM 176

[Close]
BLAST of Carg20175 vs. TAIR10
Match: AT1G76640.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 102.8 bits (255), Expect = 1.7e-22
Identity = 57/138 (41.30%), Postives = 79/138 (57.25%), Query Frame = 0 

Query: 7   RHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGD-- 66
           R  + V  Y D + DG+IS  EL+     +G ++   EAE AV+  D DGDG+L + +  
Sbjct: 21  RDLEAVFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFA 80

Query: 67  --IXXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRR 126
             I                  F +Y A+G   ITP SLK ML KLGE+++T +CKVMI+ 
Sbjct: 81  LLIKGNDEFTEEEKKRKIMEAFRMYIADGEDCITPGSLKMMLMKLGESRTTDDCKVMIQA 140

Query: 127 FDLNGDGLISFEEFQIMM 141
           FDLN DG++SF+EF +MM
Sbjct: 141 FDLNADGVLSFDEFALMM 158

[Close]
BLAST of Carg20175 vs. TAIR10
Match: AT5G42380.1 (calmodulin like 37)

HSP 1 Score: 94.4 bits (233), Expect = 6.2e-20
Identity = 54/132 (40.91%), Postives = 73/132 (55.30%), Query Frame = 0 

Query: 12  VLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGD---IXXX 71
           V  Y D + DGKIS  EL++ + L+GG L   E E  V++ D DGDG +   +   +   
Sbjct: 53  VFDYMDANSDGKISGEELQSCVSLLGGALSSREVEEVVKTSDVDGDGFIDFEEFLKLMEG 112

Query: 72  XXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRFDLNGD 131
                          FG+Y  EG  FIT  SL+R L +LGE+ +   CKVMIR FD N D
Sbjct: 113 EDGSDEERRKELKEAFGMYVMEGEEFITAASLRRTLSRLGESCTVDACKVMIRGFDQNDD 172

Query: 132 GLISFEEFQIMM 141
           G++SF+EF +MM
Sbjct: 173 GVLSFDEFVLMM 184

[Close]
BLAST of Carg20175 vs. TAIR10
Match: AT3G50770.1 (calmodulin-like 41)

HSP 1 Score: 90.5 bits (223), Expect = 8.9e-19
Identity = 50/137 (36.50%), Postives = 76/137 (55.47%), Query Frame = 0 

Query: 11  RVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDI----- 70
           +V  +FD DGDGKIS  ELR+  G +G  +    A+ A+  +D+D DG L   D      
Sbjct: 67  QVFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFEDFVGLMT 126

Query: 71  -XXXXXXXXXXXXXXXXXXFGLYDAE-GCGFITPKSLKRMLKKLGETKSTAECKVMIRRF 130
                              F +++ E G G ITPK L++ML KLGE+++  EC+ MI+ +
Sbjct: 127 RRDLYGDGEVDGDGELKTAFEMFEVEKGSGCITPKGLQKMLVKLGESRTYGECEAMIKFY 186

Query: 131 DLNGDGLISFEEFQIMM 141
           D++G+G++ F EF+ MM
Sbjct: 187 DIDGNGILDFHEFRQMM 203

[Close]
BLAST of Carg20175 vs. TAIR10
Match: AT1G24620.1 (EF hand calcium-binding protein family)

HSP 1 Score: 84.0 bits (206), Expect = 8.3e-17
Identity = 50/139 (35.97%), Postives = 70/139 (50.36%), Query Frame = 0 

Query: 4   TSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVG 63
           T  R  + V + FD +GDGKIS  EL   +  +G E+   E E A+  +D  GDG +   
Sbjct: 33  TEIRELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFE 92

Query: 64  DI--XXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIR 123
           +                     F +YD +G G I+ + L  +L+ LG+  S AEC+ MI 
Sbjct: 93  EFVELNTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECSIAECRKMIG 152

Query: 124 RFDLNGDGLISFEEFQIMM 141
             D +GDG I FEEF+IMM
Sbjct: 153 GVDKDGDGTIDFEEFKIMM 171

[Close]
BLAST of Carg20175 vs. Swiss-Prot
Match: sp|Q9SRE6|CML38_ARATH (Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.8e-22
Identity = 59/135 (43.70%), Postives = 78/135 (57.78%), Query Frame = 0 

Query: 7   RHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDI- 66
           R  + V  Y D + DG+ISP EL+     +G +L   EA  AV   D+DGDG+L   +  
Sbjct: 42  RELEAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFS 101

Query: 67  XXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRFDL 126
                             F LY AEG   ITP+SLK MLKKLGE+++T +C+VMI  FDL
Sbjct: 102 QLIKVDDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDL 161

Query: 127 NGDGLISFEEFQIMM 141
           N DG++SF+EF +MM
Sbjct: 162 NADGVLSFDEFALMM 176

[Close]
BLAST of Carg20175 vs. Swiss-Prot
Match: sp|Q8RYJ8|CML19_ORYSJ (Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica OX=39947 GN=CML19 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-21
Identity = 62/143 (43.36%), Postives = 79/143 (55.24%), Query Frame = 0 

Query: 3   ITSARHYDRVLRYFDEDGDGKISPSELRNRL-GLIGGELLPAEAEVAVESLDSDGDGLLC 62
           + +   + RV   FD D DGKIS +ELR  +   +G ++   EAE  V S D+D DGLL 
Sbjct: 2   VAATAEFRRVFSAFDRDADGKISAAELRLCMKAALGEDMSAEEAEALVSSADTDDDGLLD 61

Query: 63  VGDI----XXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECK 122
             +                       F +Y+ EG G ITP SLKRML KLG  +   EC+
Sbjct: 62  EEEFTKLAVQLEMGDEEERCRGLMEAFRMYEMEGEGRITPASLKRMLSKLGSHQGIEECQ 121

Query: 123 VMIRRFDLNGDGLISFEEFQIMM 141
            MI RFDL+GDG+ISFEEF+IMM
Sbjct: 122 TMICRFDLDGDGVISFEEFKIMM 144

[Close]
BLAST of Carg20175 vs. Swiss-Prot
Match: sp|Q9SRE7|CML39_ARATH (Calcium-binding protein CML39 OS=Arabidopsis thaliana OX=3702 GN=CML39 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.1e-21
Identity = 57/138 (41.30%), Postives = 79/138 (57.25%), Query Frame = 0 

Query: 7   RHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGD-- 66
           R  + V  Y D + DG+IS  EL+     +G ++   EAE AV+  D DGDG+L + +  
Sbjct: 21  RDLEAVFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFA 80

Query: 67  --IXXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRR 126
             I                  F +Y A+G   ITP SLK ML KLGE+++T +CKVMI+ 
Sbjct: 81  LLIKGNDEFTEEEKKRKIMEAFRMYIADGEDCITPGSLKMMLMKLGESRTTDDCKVMIQA 140

Query: 127 FDLNGDGLISFEEFQIMM 141
           FDLN DG++SF+EF +MM
Sbjct: 141 FDLNADGVLSFDEFALMM 158

[Close]
BLAST of Carg20175 vs. Swiss-Prot
Match: sp|Q8RYJ9|CML23_ORYSJ (Putative calcium-binding protein CML23 OS=Oryza sativa subsp. japonica OX=39947 GN=CML23 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.2e-19
Identity = 72/149 (48.32%), Postives = 93/149 (62.42%), Query Frame = 0 

Query: 3   ITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESL-DSDGDGLLC 62
           + ++  + RV   FD+DGDGKIS +ELR  +    GE +P E   A+ +L D+DGDGLL 
Sbjct: 1   MVASDEFRRVFGSFDQDGDGKISATELRLCVKASLGEDMPDEEVQALMALADTDGDGLLD 60

Query: 63  ----------VGDIXXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETK 122
                     +   XXXXXXXXXXXX      F +Y+ EG G ITP SLK ML KLG   
Sbjct: 61  EEEFVRLVTEMXXXXXXXXXXXXXXXRCLREAFAMYEMEGRGCITPLSLKLMLSKLGTHL 120

Query: 123 STAECKVMIRRFDLNGDGLISFEEFQIMM 141
             AEC+ MI RFD+NGDG+++F+EF+ MM
Sbjct: 121 DVAECQAMICRFDMNGDGVLTFDEFKTMM 149

[Close]
BLAST of Carg20175 vs. Swiss-Prot
Match: sp|Q9FIH9|CML37_ARATH (Calcium-binding protein CML37 OS=Arabidopsis thaliana OX=3702 GN=CML37 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-18
Identity = 54/132 (40.91%), Postives = 73/132 (55.30%), Query Frame = 0 

Query: 12  VLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGD---IXXX 71
           V  Y D + DGKIS  EL++ + L+GG L   E E  V++ D DGDG +   +   +   
Sbjct: 53  VFDYMDANSDGKISGEELQSCVSLLGGALSSREVEEVVKTSDVDGDGFIDFEEFLKLMEG 112

Query: 72  XXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRFDLNGD 131
                          FG+Y  EG  FIT  SL+R L +LGE+ +   CKVMIR FD N D
Sbjct: 113 EDGSDEERRKELKEAFGMYVMEGEEFITAASLRRTLSRLGESCTVDACKVMIRGFDQNDD 172

Query: 132 GLISFEEFQIMM 141
           G++SF+EF +MM
Sbjct: 173 GVLSFDEFVLMM 184

[Close]
BLAST of Carg20175 vs. TrEMBL
Match: tr|A0A1S3CN12|A0A1S3CN12_CUCME (putative calcium-binding protein CML19 OS=Cucumis melo OX=3656 GN=LOC103502330 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.1e-50
Identity = 107/142 (75.35%), Postives = 112/142 (78.87%), Query Frame = 0 

Query: 1   MEIT-SARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGL 60
           MEI  S   YDRVL YFDEDGDGKISPSELRNRLGLIGGELL AEAE AVESLDSDGDGL
Sbjct: 1   MEINKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELLQAEAEAAVESLDSDGDGL 60

Query: 61  LCVGDIXXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVM 120
           LC GDI                  F LYD+EGCGFITPK+LK+ML+KLGE KST ECK+M
Sbjct: 61  LCAGDIERLLEVGEEEKLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMM 120

Query: 121 IRRFDLNGDGLISFEEFQIMMA 142
           IRRFDLNGDGLISFEEFQIMMA
Sbjct: 121 IRRFDLNGDGLISFEEFQIMMA 142

[Close]
BLAST of Carg20175 vs. TrEMBL
Match: tr|A0A0A0LU40|A0A0A0LU40_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002110 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.8e-50
Identity = 109/139 (78.42%), Postives = 115/139 (82.73%), Query Frame = 0 

Query: 3   ITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCV 62
           + S   YDRVL YFDEDGDGKISPSELRNRLGLIGGEL  AEAE AVESLDSDGDGLLCV
Sbjct: 4   VKSGAQYDRVLSYFDEDGDGKISPSELRNRLGLIGGELQQAEAEAAVESLDSDGDGLLCV 63

Query: 63  GDIXXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRR 122
           GDI      XXXXX       F LYD+EGCGFITPK+LK+ML+KLGE KST ECK+MIRR
Sbjct: 64  GDIERLLEVXXXXXLKDLKEAFALYDSEGCGFITPKNLKKMLRKLGERKSTEECKMMIRR 123

Query: 123 FDLNGDGLISFEEFQIMMA 142
           FDLNGDGLISFEEFQIMMA
Sbjct: 124 FDLNGDGLISFEEFQIMMA 142

[Close]
BLAST of Carg20175 vs. TrEMBL
Match: tr|M5WYD1|M5WYD1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa019709mg PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.9e-40
Identity = 91/139 (65.47%), Postives = 102/139 (73.38%), Query Frame = 0 

Query: 3   ITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCV 62
           +TS R +DRVL YFDEDGDGKISPSELR  LG +GGELL  EAEVAVE LDSDGDGLL +
Sbjct: 1   MTSNRGFDRVLSYFDEDGDGKISPSELRRGLGFMGGELLQKEAEVAVELLDSDGDGLLGL 60

Query: 63  GD-IXXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIR 122
            D +                  F +YD EGCGFITPKSLKRML  LGE++S  ECKVMI 
Sbjct: 61  EDLVCLMEGGEEEEKVKGLRDAFQVYDVEGCGFITPKSLKRMLSSLGESRSIDECKVMIN 120

Query: 123 RFDLNGDGLISFEEFQIMM 141
           +FDLNGDG+ISFEEF+IMM
Sbjct: 121 QFDLNGDGVISFEEFRIMM 139

[Close]
BLAST of Carg20175 vs. TrEMBL
Match: tr|A0A2P6P4Z4|A0A2P6P4Z4_ROSCH (Putative EF-hand domain pair protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0190421 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 5.0e-40
Identity = 90/137 (65.69%), Postives = 101/137 (73.72%), Query Frame = 0 

Query: 5   SARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGD 64
           S R ++RV  YFDEDGDGKISPSELRNRLGL+GGE+L  EAEVAV  LDSDGDGLL + D
Sbjct: 3   SNRGFERVFSYFDEDGDGKISPSELRNRLGLMGGEMLQNEAEVAVGFLDSDGDGLLGLDD 62

Query: 65  -IXXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRF 124
            +                  F +YD EGCGFITPKSLKRML +LGE+KS  ECKVMI +F
Sbjct: 63  LVGLMEGGEEEEKMKGLREAFEVYDEEGCGFITPKSLKRMLNRLGESKSIEECKVMINQF 122

Query: 125 DLNGDGLISFEEFQIMM 141
           DLNGDGLISFEEF +MM
Sbjct: 123 DLNGDGLISFEEFTVMM 139

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BLAST of Carg20175 vs. TrEMBL
Match: tr|A0A251P8V2|A0A251P8V2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G152700 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.9e-39
Identity = 90/137 (65.69%), Postives = 100/137 (72.99%), Query Frame = 0 

Query: 5   SARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGD 64
           S R +DRVL YFDEDGDGKISPSELR  LG +GGELL  EAEVAVE LDSDGDGLL + D
Sbjct: 3   SNRGFDRVLSYFDEDGDGKISPSELRRGLGFMGGELLQKEAEVAVELLDSDGDGLLGLED 62

Query: 65  -IXXXXXXXXXXXXXXXXXXFGLYDAEGCGFITPKSLKRMLKKLGETKSTAECKVMIRRF 124
            +                  F +YD EGCGFITPKSLKRML  LGE++S  ECKVMI +F
Sbjct: 63  LVCLMEGGEEEEKVKGLRDAFQVYDVEGCGFITPKSLKRMLSSLGESRSIDECKVMINQF 122

Query: 125 DLNGDGLISFEEFQIMM 141
           DLNGDG+ISFEEF+IMM
Sbjct: 123 DLNGDGVISFEEFRIMM 139

The following BLAST results are available for this feature:
BLAST of Carg20175 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022925940.11.1e-5998.58putative calcium-binding protein CML19 [Cucurbita moschata][more]
XP_022966390.12.5e-5997.87probable calcium-binding protein CML31 [Cucurbita maxima][more]
XP_023529455.14.2e-5997.87probable calcium-binding protein CML31 [Cucurbita pepo subsp. pepo][more]
XP_008464450.11.6e-5075.35PREDICTED: putative calcium-binding protein CML19 [Cucumis melo][more]
XP_004138054.12.8e-5078.42PREDICTED: putative calcium-binding protein CML19 [Cucumis sativus] >KGN63491.1 ... [more]
BLAST of Carg20175 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G76650.12.7e-2343.70calmodulin-like 38[more]
AT1G76640.11.7e-2241.30Calcium-binding EF-hand family protein[more]
AT5G42380.16.2e-2040.91calmodulin like 37[more]
AT3G50770.18.9e-1936.50calmodulin-like 41[more]
AT1G24620.18.3e-1735.97EF hand calcium-binding protein family[more]
BLAST of Carg20175 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SRE6|CML38_ARATH4.8e-2243.70Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=2 SV=1[more]
sp|Q8RYJ8|CML19_ORYSJ1.4e-2143.36Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
sp|Q9SRE7|CML39_ARATH3.1e-2141.30Calcium-binding protein CML39 OS=Arabidopsis thaliana OX=3702 GN=CML39 PE=2 SV=1[more]
sp|Q8RYJ9|CML23_ORYSJ2.2e-1948.32Putative calcium-binding protein CML23 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
sp|Q9FIH9|CML37_ARATH1.1e-1840.91Calcium-binding protein CML37 OS=Arabidopsis thaliana OX=3702 GN=CML37 PE=2 SV=1[more]
BLAST of Carg20175 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CN12|A0A1S3CN12_CUCME1.1e-5075.35putative calcium-binding protein CML19 OS=Cucumis melo OX=3656 GN=LOC103502330 P... [more]
tr|A0A0A0LU40|A0A0A0LU40_CUCSA1.8e-5078.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002110 PE=4 SV=1[more]
tr|M5WYD1|M5WYD1_PRUPE2.9e-4065.47Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa019709mg PE=4 SV=1[more]
tr|A0A2P6P4Z4|A0A2P6P4Z4_ROSCH5.0e-4065.69Putative EF-hand domain pair protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7... [more]
tr|A0A251P8V2|A0A251P8V2_PRUPE1.9e-3965.69Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G152700 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20175-RACarg20175-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 79..107
e-value: 0.1
score: 21.7
coord: 8..36
e-value: 0.1
score: 21.7
coord: 115..141
e-value: 0.078
score: 22.1
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 12..31
e-value: 8.8E-6
score: 24.9
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 78..140
e-value: 1.2E-12
score: 48.0
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 4..39
score: 12.087
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 40..74
score: 5.698
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 75..110
score: 11.473
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 111..141
score: 14.262
IPR002048EF-hand domainCDDcd00051EFhcoord: 79..141
e-value: 4.69217E-15
score: 64.8765
NoneNo IPR availableGENE3DG3DSA:1.10.238.10coord: 2..69
e-value: 1.1E-9
score: 40.4
NoneNo IPR availableGENE3DG3DSA:1.10.238.10coord: 70..141
e-value: 3.2E-22
score: 80.6
NoneNo IPR availablePANTHERPTHR43996:SF8SUBFAMILY NOT NAMEDcoord: 7..140
NoneNo IPR availablePANTHERPTHR43996FAMILY NOT NAMEDcoord: 7..140
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 17..29
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 124..136
IPR011992EF-hand domain pairSUPERFAMILYSSF47473EF-handcoord: 11..140

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg20175Cla019269Watermelon (97103) v1carwmB1047
Carg20175Csa1G002110Cucumber (Chinese Long) v2carcuB1062
Carg20175MELO3C026214Melon (DHL92) v3.5.1carmeB1015
Carg20175ClCG06G017800Watermelon (Charleston Gray)carwcgB1019
Carg20175CSPI01G00620Wild cucumber (PI 183967)carcpiB1083
Carg20175Cucsa.157410Cucumber (Gy14) v1carcgyB1161
Carg20175CmaCh11G014910Cucurbita maxima (Rimu)carcmaB1450
Carg20175CmaCh11G000410Cucurbita maxima (Rimu)carcmaB1449
Carg20175CmaCh10G000700Cucurbita maxima (Rimu)carcmaB1448
Carg20175CmoCh10G000650Cucurbita moschata (Rifu)carcmoB1402
Carg20175CmoCh11G016280Cucurbita moschata (Rifu)carcmoB1404
Carg20175CmoCh11G000420Cucurbita moschata (Rifu)carcmoB1403
Carg20175Lsi06G016340Bottle gourd (USVL1VR-Ls)carlsiB955
Carg20175Cp4.1LG04g05890Cucurbita pepo (Zucchini)carcpeB1457
Carg20175Cp4.1LG04g16040Cucurbita pepo (Zucchini)carcpeB1458
Carg20175Cp4.1LG18g08810Cucurbita pepo (Zucchini)carcpeB1456
Carg20175CsGy1G000630Cucumber (Gy14) v2carcgybB1031
Carg20175MELO3C026214.2Melon (DHL92) v3.6.1carmedB1027
Carg20175CsaV3_1G000650Cucumber (Chinese Long) v3carcucB1095
Carg20175Cla97C06G127530Watermelon (97103) v2carwmbB1105
Carg20175Bhi02G000399Wax gourdcarwgoB1226
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg20175Carg10289Silver-seed gourdcarcarB396
Carg20175Carg15572Silver-seed gourdcarcarB399
The following block(s) are covering this gene:
GeneOrganismBlock
Carg20175Silver-seed gourdcarcarB446
Carg20175Silver-seed gourdcarcarB484