Cp4.1LG18g01900 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG18g01900
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG18 : 3606296 .. 3606562 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCGGCCGCGACACCAACGTCAGCCGTCACAAGTTCTTCCGCCGGAGCTGATCTCCGGTGTGGATCCGTCTCAGATCTTGGACTTCGGCCAGGCAGTTGCCAGAACAGTTTCCGGCCAACCCCACAAGGCAACTGAAGCTGCTACGAATGTGGCCACCGCCGCTGCGGTCCTTCAGCGGTCCAAGACTTCCGGTGGTCAGGAGGGCTCCGGGTCCGGGTCCGGCCATTTCCCTCAGCTCCCGAAAACGCCGCCGTCTACTTAA

mRNA sequence

ATGCCTCGGCCGCGACACCAACGTCAGCCGTCACAAGTTCTTCCGCCGGAGCTGATCTCCGGTGTGGATCCGTCTCAGATCTTGGACTTCGGCCAGGCAGTTGCCAGAACAGTTTCCGGCCAACCCCACAAGGCAACTGAAGCTGCTACGAATGTGGCCACCGCCGCTGCGGTCCTTCAGCGGTCCAAGACTTCCGGTGGTCAGGAGGGCTCCGGGTCCGGGTCCGGCCATTTCCCTCAGCTCCCGAAAACGCCGCCGTCTACTTAA

Coding sequence (CDS)

ATGCCTCGGCCGCGACACCAACGTCAGCCGTCACAAGTTCTTCCGCCGGAGCTGATCTCCGGTGTGGATCCGTCTCAGATCTTGGACTTCGGCCAGGCAGTTGCCAGAACAGTTTCCGGCCAACCCCACAAGGCAACTGAAGCTGCTACGAATGTGGCCACCGCCGCTGCGGTCCTTCAGCGGTCCAAGACTTCCGGTGGTCAGGAGGGCTCCGGGTCCGGGTCCGGCCATTTCCCTCAGCTCCCGAAAACGCCGCCGTCTACTTAA

Protein sequence

MPRPRHQRQPSQVLPPELISGVDPSQILDFGQAVARTVSGQPHKATEAATNVATAAAVLQRSKTSGGQEGSGSGSGHFPQLPKTPPST
Homology
[Close]
BLAST of Cp4.1LG18g01900 vs. TrEMBL
Match: A0A0A0M0A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G629040 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 8.7e-21
Identity = 62/91 (68.13%), Postives = 67/91 (73.63%), Query Frame = 1 

Query: 1  MPRPRHQRQPSQVLPPELISGVDPSQILDFGQAVARTVSGQPHKATEAATNVATAAA--- 60
          MPRPRHQRQ SQVLPP+ IS  DPSQILDF   VA  VSGQPH+ ++A  N A AAA   
Sbjct: 1  MPRPRHQRQLSQVLPPDFISAEDPSQILDFSIGVAGAVSGQPHQPSQATANAAAAAAAAT 60

Query: 61 VLQRSKTSGGQEGSGSGSGHFPQLPKTPPST 89
          VLQRSK   GQE  GSG+GHF QLPKT PST
Sbjct: 61 VLQRSKNPAGQE--GSGAGHFSQLPKTAPST 89

[Close]
BLAST of Cp4.1LG18g01900 vs. NCBI nr
Match: gi|700211451|gb|KGN66547.1| (hypothetical protein Csa_1G629040 [Cucumis sativus])

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-20
Identity = 62/91 (68.13%), Postives = 67/91 (73.63%), Query Frame = 1 

Query: 1  MPRPRHQRQPSQVLPPELISGVDPSQILDFGQAVARTVSGQPHKATEAATNVATAAA--- 60
          MPRPRHQRQ SQVLPP+ IS  DPSQILDF   VA  VSGQPH+ ++A  N A AAA   
Sbjct: 1  MPRPRHQRQLSQVLPPDFISAEDPSQILDFSIGVAGAVSGQPHQPSQATANAAAAAAAAT 60

Query: 61 VLQRSKTSGGQEGSGSGSGHFPQLPKTPPST 89
          VLQRSK   GQE  GSG+GHF QLPKT PST
Sbjct: 61 VLQRSKNPAGQE--GSGAGHFSQLPKTAPST 89

The following BLAST results are available for this feature:
BLAST of Cp4.1LG18g01900 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG18g01900 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M0A1_CUCSA8.7e-2168.13Uncharacterized protein OS=Cucumis sativus GN=Csa_1G629040 PE=4 SV=1[more]
BLAST of Cp4.1LG18g01900 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG18g01900 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211451|gb|KGN66547.1|1.2e-2068.13hypothetical protein Csa_1G629040 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG18g01900.1Cp4.1LG18g01900.1mRNA