CSPI01G31020 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G31020
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 25552322 .. 25552843 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAAAATTCCCTCTCTCTCTCTCTCTCTCTAACTATGCCCCGCCCGCGACACCAACGTCAGCTCTCTCAAGTTCTCCCCCCGGACTTCATCTCCGCCGAGGATCCGTCTCAGATCTTGGACTTCTCTATCGGAGTCGCCGGTGCTGTTTCCGGCCAACCCCATCAGCCATCTCAAGCTACTGCAAATGCTGCTGCCGCAGCCGCCGCTTCCACCGTTCTTCAGCGGTCAAAGAATCCAGCAGGTCAGGAAGGCTCCGGCGCCGGTCACTTCTCTCAGCTTCCAAAAACGGCACCCTCTACTTGAACACCCAACTCTCCGTCTGTCTTGAAACCTTTTTTTCTTTTTTTCTTTTTTACTTTAATTCTCTCTCTCTCTAGATTTCATGTCTTTGTAATGTTAGTTTTTCTTTTTCTTTTAGGTCAATGAGAGATCCTTTCTCTCTTTTATCTCAAACCCAGAAATAAATTTGATGAAATGGAAGAAGGGTTGTTCATGTGGATCTTCATCTCGGAATTTCATCG

mRNA sequence

ATGCCCCGCCCGCGACACCAACGTCAGCTCTCTCAAGTTCTCCCCCCGGACTTCATCTCCGCCGAGGATCCGTCTCAGATCTTGGACTTCTCTATCGGAGTCGCCGGTGCTGTTTCCGGCCAACCCCATCAGCCATCTCAAGCTACTGCAAATGCTGCTGCCGCAGCCGCCGCTTCCACCGTTCTTCAGCGGTCAAAGAATCCAGCAGGTCAGGAAGGCTCCGGCGCCGGTCACTTCTCTCAGCTTCCAAAAACGGCACCCTCTACTTGA

Coding sequence (CDS)

ATGCCCCGCCCGCGACACCAACGTCAGCTCTCTCAAGTTCTCCCCCCGGACTTCATCTCCGCCGAGGATCCGTCTCAGATCTTGGACTTCTCTATCGGAGTCGCCGGTGCTGTTTCCGGCCAACCCCATCAGCCATCTCAAGCTACTGCAAATGCTGCTGCCGCAGCCGCCGCTTCCACCGTTCTTCAGCGGTCAAAGAATCCAGCAGGTCAGGAAGGCTCCGGCGCCGGTCACTTCTCTCAGCTTCCAAAAACGGCACCCTCTACTTGA
Homology
[Close]
BLAST of CSPI01G31020 vs. TrEMBL
Match: A0A0A0M0A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G629040 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 4.2e-39
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 1 

Query: 1  MPRPRHQRQLSQVLPPDFISAEDPSQILDFSIGVAGAVSGQPHQPSQATANAAAAAAAST 60
          MPRPRHQRQLSQVLPPDFISAEDPSQILDFSIGVAGAVSGQPHQPSQATANAAAAAAA+T
Sbjct: 1  MPRPRHQRQLSQVLPPDFISAEDPSQILDFSIGVAGAVSGQPHQPSQATANAAAAAAAAT 60

Query: 61 VLQRSKNPAGQEGSGAGHFSQLPKTAPST 90
          VLQRSKNPAGQEGSGAGHFSQLPKTAPST
Sbjct: 61 VLQRSKNPAGQEGSGAGHFSQLPKTAPST 89

[Close]
BLAST of CSPI01G31020 vs. NCBI nr
Match: gi|700211451|gb|KGN66547.1| (hypothetical protein Csa_1G629040 [Cucumis sativus])

HSP 1 Score: 168.3 bits (425), Expect = 6.1e-39
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 1 

Query: 1  MPRPRHQRQLSQVLPPDFISAEDPSQILDFSIGVAGAVSGQPHQPSQATANAAAAAAAST 60
          MPRPRHQRQLSQVLPPDFISAEDPSQILDFSIGVAGAVSGQPHQPSQATANAAAAAAA+T
Sbjct: 1  MPRPRHQRQLSQVLPPDFISAEDPSQILDFSIGVAGAVSGQPHQPSQATANAAAAAAAAT 60

Query: 61 VLQRSKNPAGQEGSGAGHFSQLPKTAPST 90
          VLQRSKNPAGQEGSGAGHFSQLPKTAPST
Sbjct: 61 VLQRSKNPAGQEGSGAGHFSQLPKTAPST 89

The following BLAST results are available for this feature:
BLAST of CSPI01G31020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G31020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M0A1_CUCSA4.2e-3998.88Uncharacterized protein OS=Cucumis sativus GN=Csa_1G629040 PE=4 SV=1[more]
BLAST of CSPI01G31020 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI01G31020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211451|gb|KGN66547.1|6.1e-3998.88hypothetical protein Csa_1G629040 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G31020.1CSPI01G31020.1mRNA