Cp4.1LG17g10860 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG17g10860
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Trigger factor
Location	Cp4.1LG17 : 8207909 .. 8211524 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGAATTAAACGGCGTCGTATTACAACTTGGATAAGTCTTTGCTGGAAGAGAAACTTTCAAGCTGAGGCGCGCTTGAAAAAAATGGCGTCCGCAACTGCAACGGTGGCCAACATCGCTTTAGAATTCCGGCGGCCAGTTTTCACCAAAGTAAGTAATTCTATCCATATTCTCAGAAGCCTAACTCATGAATCGAATCTCGAAGCTCCACCGCATTTTTCCGCCTTCCTCCCGATATGTTTGGGATATTACCATTTTCAAATCATTTTTTGTGTTGCAGGTTCCTGTTAATGGCCGCCGCCGCAATGCTCTGGTTTGTCTGAACTTCGGAGGCGTTGAATTTGAAAATGTACAGGATAGGCTGTGTACGAGGTAAACATGTATTTTGATTTGTTTTTATTTGTTTATTGAGCGGTGTAGTGATGTATATTGCTTGTTCAGTTAACTGTACATAGAAACTGATGTATAGAAGTAGGAACGTTTCTTCATTTCCAGGTCCTCAGTTTCTTATAGTCCCCTAGTAGTTGGTTCCAGGTTTTTGTCCAGACCGACGGCCATAGCTAGTTCAGGTAATTCTGACTCTAGTCATGAACTTCAGTATGTTACTATTTAGCCTATGTATATTCAAATTTGTAATGGTTTAGATCTATTGTGGACTACGAGGACTAAATTATGTTCATTGACCACATCGTACAAGTTTTAAAATACAGGAATCAAATTGTTCATGGACCAAATTGCTTACTTGATCAAATGTATTTTTTAACTTTATTTTTCTTCTTCTTTTCTTCCAGAATTGATAACCATTTGGTATTCAAAGTATAAGCTTATAAACATTACTTCCACCTATGAGGTTCTTTGTTTTGTTATCTGCCTTCTAAAAAGTGTGTTCAAAATTCAAGCCAAATTTGATTTTGTTATTGGAATTGACCAAGAATTTAAATGTTTCTTTAAGAAAGGTGAAAACCGTAGCAAAGAATTTGTTAGAAAATAAGCATAAACTACGTAATCGAACAGCTAGAAACAAAATCGTTATCGATTCGGGTCATAGTAATTTGGAAGCTATGACAAAAGTTGGACTGTTTTTACCAGTAAATCTTGTCTTGCGTGCACTCAGAAGACATGTTTCAAAAAGTTTAGCATATTGCAAATCGTGTTTAAGAAACGTGATTGTAGACCTAAAAAGTGGGTAAGAAACACAATGATGGATTTGGTAAAAGTTATCCCTGTTTTGTTGATCTTCTGTTTTGATGTCATAGGCTTGGAGGCAGCCATCACAGATTACAAAGGTGCTATAACCTTAAAAAATGCTAAAATAGTTGTAGAATCTGAGGATGAAAGCATGATACAGGTAAAACTACCTATGTGAACTAGTTGTAGCGTGCATAACATTTTAGGTTGTAGCATAGAGTTTTACCACTTTGATTTTCATCCCAAAGGAATTTACATCTAATACTTTTATAGCATTTTAGAATACTTTCCTCTGACAAGTTATCGAAGATCTCATTCTGCCCTTAAACTATTCAACTTCGTTTCTAGTTTCACTTTCAAGAGTAGATTTAATGCTGTTTGATGCATGCTGATACAAATCTTATAAGATGATATGTATATTTCATATTGGAAATTTGGTGGAAGCTTTTATCCTCTTAAGTCATAAATTATACATATAGTTCCCCATATGAAATACAGATCTTACCAAATGTATTTATATTTCATATTGCAAAATGGAGGCTAATCTATTACTTAGGCCTTGCATTCCAAAATTTGATAGAACATGGTTTATTTTATTTATGAACAAGATGGTAAAAACTTAGAGGGATAATCAGAGATTTCTCTTCTCCCCAACTGGCAACTACCATACTTAACTCATGAAAAGCTTACATCCTTAAGAGACTACCGTCTCGTTATCTATTCTCTTACTCTCCCAAACCTCACTTAGTTACAACTTGTGCCCACGGTAGGAAATCAAGATGTAAAGATTGGGTACATATCTTTGATAAATGTCTAATGAAATCTAATGAACAGCTAAGAGTGGACTTGACTGGGGACGAGACGCAAAAGGTATTCGATCAGGTTTTGACGAATTTGGCCCGCTCAGCCCCGCCAATGCCAGGATTTCGTAAGCAAAAAGGAGGTAGTACCGTGATTTTCCTCCCCCCCTTCACTGTGAATGTCGTTACAACCGTTCATTTATACTGCAACACAAGTCTTTTACATGTTCATCCATATAGACAAACATGAGAATTGAGAAGTACCGTTTCTATAATTACGAATTCATATATGCAGCTGCTTTTACCCTCCTAAATTTTTATGTTTAGTAGCAGATGACTCGACTTTATATGGTTTCTAATGTTTTTGTGTTTTCATGCCCGTTGATGCTTGGCCAGGGAAAACTTCAAATGTGAGTTGCTTCTCTTTGCCTTTTCAACTTTCCCCTTTGGGTTTCCAAGTACTTTTAAGTTGTTATGTCCTTTTTTCTCAATATCGTTCTATTCTTATACATATTGTTCTATTCTTCCCCAAGGTTTCTATTTGTAAATAACGAATTCCTTCAGGTCCCAAAAAGCTTCCTCTTAGAAGTCCTTGGTAAGGATCGGGTCACAAAGTTCGTCATACAAGAAATATTAAACTCAACTATGGCAGATTATGCAAAGAAGGCAAGTTGTATCCTCATTGCTTTGCTCCTTTCTTATACCTACTGCCTGTGTGCTGATTGTAATTTGGGAGCTGTTTTTGAATTGGTTTTCCTAGATGCCTTTTAGAAGTTAATTGTATTGGGTATATTGAAATCACTATTCGTTAACTATTTACAAACTTATAATTTTGATGATTGTGTCTGTATAGTTTCTATATCTCTATGTTTTTAAAAGTTTCAATTGTGATTTTACATGATAGAGCGTTACCATCATTAACTAAAATGATGACACGACACGTGAGATCCCACATCAGTTTGAGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTTCCTAGCAGACGCATTTTAAAAATCTTGAGAAAAGTTCAAAATAGAAAGTCCAAAGAGGAGAATATTTGCTAGCGGTGGACTTGGGCTGGTACATGACACGGCTACTACACATATATTTTGTTAATTTGGCACGACGTAACAGACAAATGATAGAAAGAAGTCAAACAATTAGATAAAGGAGGACGTAGTTTATGAAATGAATTTGATACAGCTCGTTTTTCTTTTGTTTCGACTCCAACGCAGGAAGATATAAAGGTGAAGGACAAGATGGTTAACACAACTCAAACAGAAGATGAACTGAAAGTGTTGTTCAGACCTGGAAAAGAGTTTGGTTTCAATGCTATACTTGAACTTGAACCTGAACCCGAACCCGAACCCGAACTTGACTCTGCTTCAGAGGATGAAAATTGAGCCAAACAGGTCCCCCTTTCCAACTGAAGATTTTCTCCACTTGTTCTTTCTTGGCCCTCTTTCAAAGTTTTGGAAATATTTTGTTGAAGGAACAAATGTTTAATTATCCATACTGATGCATTGATCAGTATTAATGAGTTCTAGTTACTAAGTTATTTGTTTACTTGTTATTTTTATCTGTTTTTAGTTCATACTACACCTAAACTAGAACTT

mRNA sequence

AAGGAATTAAACGGCGTCGTATTACAACTTGGATAAGTCTTTGCTGGAAGAGAAACTTTCAAGCTGAGGCGCGCTTGAAAAAAATGGCGTCCGCAACTGCAACGGTGGCCAACATCGCTTTAGAATTCCGGCGGCCAGTTTTCACCAAAGTTCCTGTTAATGGCCGCCGCCGCAATGCTCTGGTTTGTCTGAACTTCGGAGGCGTTGAATTTGAAAATGTACAGGATAGGCTGTGTACGAGGTCCTCAGTTTCTTATAGTCCCCTAGTAGTTGGCTTGGAGGCAGCCATCACAGATTACAAAGGTGCTATAACCTTAAAAAATGCTAAAATAGTTGTAGAATCTGAGGATGAAAGCATGATACAGCTAAGAGTGGACTTGACTGGGGACGAGACGCAAAAGGTATTCGATCAGGTTTTGACGAATTTGGCCCGCTCAGCCCCGCCAATGCCAGGATTTCGTAAGCAAAAAGGAGTTCATACTACACCTAAACTAGAACTT

Coding sequence (CDS)

ATGGCGTCCGCAACTGCAACGGTGGCCAACATCGCTTTAGAATTCCGGCGGCCAGTTTTCACCAAAGTTCCTGTTAATGGCCGCCGCCGCAATGCTCTGGTTTGTCTGAACTTCGGAGGCGTTGAATTTGAAAATGTACAGGATAGGCTGTGTACGAGGTCCTCAGTTTCTTATAGTCCCCTAGTAGTTGGCTTGGAGGCAGCCATCACAGATTACAAAGGTGCTATAACCTTAAAAAATGCTAAAATAGTTGTAGAATCTGAGGATGAAAGCATGATACAGCTAAGAGTGGACTTGACTGGGGACGAGACGCAAAAGGTATTCGATCAGGTTTTGACGAATTTGGCCCGCTCAGCCCCGCCAATGCCAGGATTTCGTAAGCAAAAAGGAGTTCATACTACACCTAAACTAGAACTT

Protein sequence

MASATATVANIALEFRRPVFTKVPVNGRRRNALVCLNFGGVEFENVQDRLCTRSSVSYSPLVVGLEAAITDYKGAITLKNAKIVVESEDESMIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGVHTTPKLEL

Homology

[Close]

BLAST of Cp4.1LG17g10860 vs. TrEMBL
Match: A0A0A0K988_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G086160 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.8e-47
Identity = 108/148 (72.97%), Postives = 117/148 (79.05%), Query Frame = 1


Query: 2   ASATATVANIALEFRRPVFTKVPVNGRRRNALVCLNFGGVEFENVQDRLCTRSSVSYS-- 61
           A+ATATV NIA EF RP+FTKVPV G   NALVCLNFGGVEF+NV+D LC RSS SYS  
Sbjct: 6   ATATATVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSFSYSFH 65

Query: 62  ---------PLVV---GLEAAITDYKG-AITLKNAKIVVESEDESMIQLRVDLTGDETQK 121
                    P  +   GLEAAITDYKG  ITLKNAK+VVESE+E+ IQLRVDLTGDETQK
Sbjct: 66  KIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGDETQK 125

Query: 122 VFDQVLTNLARSAPPMPGFRKQKGVHTT 135
           VFDQVLTNLARSAPPMPGFRKQKG  T+
Sbjct: 126 VFDQVLTNLARSAPPMPGFRKQKGGKTS 153

[Close]

BLAST of Cp4.1LG17g10860 vs. TrEMBL
Match: A0A067EES7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025691mg PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 9.8e-19
Identity = 49/71 (69.01%), Postives = 62/71 (87.32%), Query Frame = 1


Query: 64  GLEAAITDYKGAITLKNAKIVVESEDESMIQLRVDLTGDETQKVFDQVLTNLARSAPPMP 123
           G+E +IT+ +  IT+K+AKIVVES+DE  IQ+RVDLTGD TQ+VFD+VLTNLARSAPP+P
Sbjct: 79  GVEVSITEPEDLITVKDAKIVVESQDEDKIQVRVDLTGDATQRVFDKVLTNLARSAPPIP 138

Query: 124 GFRKQKGVHTT 135
           GFR++KG  TT
Sbjct: 139 GFRREKGGKTT 149

[Close]

BLAST of Cp4.1LG17g10860 vs. TrEMBL
Match: A0A067EB32_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025691mg PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 9.8e-19
Identity = 49/71 (69.01%), Postives = 62/71 (87.32%), Query Frame = 1


Query: 64  GLEAAITDYKGAITLKNAKIVVESEDESMIQLRVDLTGDETQKVFDQVLTNLARSAPPMP 123
           G+E +IT+ +  IT+K+AKIVVES+DE  IQ+RVDLTGD TQ+VFD+VLTNLARSAPP+P
Sbjct: 74  GVEVSITEPEDLITVKDAKIVVESQDEDKIQVRVDLTGDATQRVFDKVLTNLARSAPPIP 133

Query: 124 GFRKQKGVHTT 135
           GFR++KG  TT
Sbjct: 134 GFRREKGGKTT 144

[Close]

BLAST of Cp4.1LG17g10860 vs. TrEMBL
Match: V4TRN9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021832mg PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 9.8e-19
Identity = 49/71 (69.01%), Postives = 62/71 (87.32%), Query Frame = 1


Query: 64  GLEAAITDYKGAITLKNAKIVVESEDESMIQLRVDLTGDETQKVFDQVLTNLARSAPPMP 123
           G+E +IT+ +  IT+K+AKIVVES+DE  IQ+RVDLTGD TQ+VFD+VLTNLARSAPP+P
Sbjct: 79  GVEVSITEPEDLITVKDAKIVVESQDEDKIQVRVDLTGDATQRVFDKVLTNLARSAPPIP 138

Query: 124 GFRKQKGVHTT 135
           GFR++KG  TT
Sbjct: 139 GFRREKGGKTT 149

[Close]

BLAST of Cp4.1LG17g10860 vs. TrEMBL
Match: A0A067EMG4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025691mg PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 9.8e-19
Identity = 49/71 (69.01%), Postives = 62/71 (87.32%), Query Frame = 1


Query: 64  GLEAAITDYKGAITLKNAKIVVESEDESMIQLRVDLTGDETQKVFDQVLTNLARSAPPMP 123
           G+E +IT+ +  IT+K+AKIVVES+DE  IQ+RVDLTGD TQ+VFD+VLTNLARSAPP+P
Sbjct: 79  GVEVSITEPEDLITVKDAKIVVESQDEDKIQVRVDLTGDATQRVFDKVLTNLARSAPPIP 138

Query: 124 GFRKQKGVHTT 135
           GFR++KG  TT
Sbjct: 139 GFRREKGGKTT 149

[Close]

BLAST of Cp4.1LG17g10860 vs. TAIR10
Match: AT2G30695.1 (AT2G30695.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 51.2 bits (121), Expect = 5.9e-07
Identity = 30/90 (33.33%), Postives = 55/90 (61.11%), Query Frame = 1


Query: 45  NVQDRLCTRSSVSYSPLVVGLEAAITDYKGAITLKNAKIV-VESEDESMIQLRVDLTGDE 104
           +VQ +LCTR++   +   V + AA +D + +   ++  I  VE+E  + +++ V ++G++
Sbjct: 37  SVQQKLCTRAT---NRQFVAVCAAPSDVETSSKDESVLITKVETETSNEVKVHVQVSGEK 96

Query: 105 TQKVFDQVLTNLARSAPPMPGFRKQKGVHT 134
           TQ VF+ V   +  +A P+PGFR+ KG  T
Sbjct: 97  TQTVFNHVFEKMVAAAQPIPGFRRVKGGKT 123

[Close]

BLAST of Cp4.1LG17g10860 vs. NCBI nr
Match: gi|778711475|ref|XP_011656737.1| (PREDICTED: uncharacterized protein LOC101212225 [Cucumis sativus])

HSP 1 Score: 195.7 bits (496), Expect = 5.5e-47
Identity = 108/148 (72.97%), Postives = 117/148 (79.05%), Query Frame = 1


Query: 2   ASATATVANIALEFRRPVFTKVPVNGRRRNALVCLNFGGVEFENVQDRLCTRSSVSYS-- 61
           A+ATATV NIA EF RP+FTKVPV G   NALVCLNFGGVEF+NV+D LC RSS SYS  
Sbjct: 6   ATATATVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSFSYSFH 65

Query: 62  ---------PLVV---GLEAAITDYKG-AITLKNAKIVVESEDESMIQLRVDLTGDETQK 121
                    P  +   GLEAAITDYKG  ITLKNAK+VVESE+E+ IQLRVDLTGDETQK
Sbjct: 66  KIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGDETQK 125

Query: 122 VFDQVLTNLARSAPPMPGFRKQKGVHTT 135
           VFDQVLTNLARSAPPMPGFRKQKG  T+
Sbjct: 126 VFDQVLTNLARSAPPMPGFRKQKGGKTS 153

[Close]

BLAST of Cp4.1LG17g10860 vs. NCBI nr
Match: gi|659120113|ref|XP_008460020.1| (PREDICTED: uncharacterized protein LOC103498959 [Cucumis melo])

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-45
Identity = 107/149 (71.81%), Postives = 116/149 (77.85%), Query Frame = 1


Query: 2   ASATATVANIAL-EFRRPVFTKVPVNGRRRNALVCLNFGGVEFENVQDRLCTRSSVSYSP 61
           A+ATATV NIA  EF RP+FTKV V G   NALVCLNFGGVEF+NVQD LC RSS SYS 
Sbjct: 6   ATATATVTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSS 65

Query: 62  LVVG--------------LEAAITDYKG-AITLKNAKIVVESEDESMIQLRVDLTGDETQ 121
             +G              LEAA+TDYKG AITLKNAK+VVESE+E+ IQLRVDLTGDETQ
Sbjct: 66  HRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLTGDETQ 125

Query: 122 KVFDQVLTNLARSAPPMPGFRKQKGVHTT 135
           KVFDQVLTNLARSAPPMPGFRKQKG  T+
Sbjct: 126 KVFDQVLTNLARSAPPMPGFRKQKGGKTS 154

[Close]

BLAST of Cp4.1LG17g10860 vs. NCBI nr
Match: gi|720008759|ref|XP_010258721.1| (PREDICTED: uncharacterized protein LOC104598383 [Nelumbo nucifera])

HSP 1 Score: 109.8 bits (273), Expect = 4.0e-21
Identity = 66/136 (48.53%), Postives = 87/136 (63.97%), Query Frame = 1


Query: 11  IALEFRRPVFTKVPVNGRRRNALVCLNFGGVEFENVQDRLCTRSSVSY---------SPL 70
           + L FRR ++  +P       ++ C N   + F ++++ L TR    Y         S  
Sbjct: 369 LRLGFRRVMYRSLP-----SLSVTCRNNTNITFHDIKEDLSTRLLFPYFRPHRCLCQSIF 428

Query: 71  VVG--LEAAITDYKGA-ITLKNAKIVVESEDESMIQLRVDLTGDETQKVFDQVLTNLARS 130
            VG  LEA+ITD KG    L+NAKIVVES DE  IQ+RVDLTG+ETQK+FD+VLTNLAR+
Sbjct: 429 AVGSGLEASITDPKGTGRALENAKIVVESHDEDKIQVRVDLTGEETQKIFDEVLTNLART 488

Query: 131 APPMPGFRKQKGVHTT 135
           APP+PGFR+QKG  T+
Sbjct: 489 APPIPGFRRQKGGKTS 499

[Close]

BLAST of Cp4.1LG17g10860 vs. NCBI nr
Match: gi|645223426|ref|XP_008218625.1| (PREDICTED: uncharacterized protein LOC103318938 isoform X2 [Prunus mume])

HSP 1 Score: 105.1 bits (261), Expect = 9.8e-20
Identity = 65/123 (52.85%), Postives = 82/123 (66.67%), Query Frame = 1


Query: 22  KVPVNGRRRNALVCLNFGG-VEFENVQDRLCTR----SSVSYSPLVV----GLEAAITDY 81
           K PV      AL C N    V F N Q +L T          S L+     GLEA+I D 
Sbjct: 16  KFPVRSYCSRALTCQNATRIVGFCNTQRKLFTSPHKTGHARLSRLICAAGSGLEASIADV 75

Query: 82  KG-AITLKNAKIVVESEDESMIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGV 135
           +G  ITLK+AKIVVES++++ IQ+RVDLTGD+T+KVFD+VLTNLAR+APP+PGFR+QKG 
Sbjct: 76  EGNLITLKSAKIVVESQEDNKIQVRVDLTGDDTEKVFDKVLTNLARTAPPVPGFRRQKGG 135

[Close]

BLAST of Cp4.1LG17g10860 vs. NCBI nr
Match: gi|694329251|ref|XP_009355392.1| (PREDICTED: uncharacterized protein LOC103946417 isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 104.0 bits (258), Expect = 2.2e-19
Identity = 55/82 (67.07%), Postives = 68/82 (82.93%), Query Frame = 1


Query: 54  SSVSYSPLVVGLEAAITDYKG-AITLKNAKIVVESEDESMIQLRVDLTGDETQKVFDQVL 113
           SS  Y+    GLEA+I D +G  ITLK AKIVVES+D++ IQ+RVDLTGD+TQKVFD+VL
Sbjct: 73  SSPIYAAAGSGLEASIGDAQGNLITLKTAKIVVESQDDNKIQVRVDLTGDDTQKVFDRVL 132

Query: 114 TNLARSAPPMPGFRKQKGVHTT 135
           TNLAR+APP+PGFR+QKG  T+
Sbjct: 133 TNLARTAPPVPGFRRQKGGKTS 154

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g10860 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG17g10860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K988_CUCSA	3.8e-47	72.97	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G086160 PE=4 SV=1	[more]
A0A067EES7_CITSI	9.8e-19	69.01	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025691mg PE=4 SV=1	[more]
A0A067EB32_CITSI	9.8e-19	69.01	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025691mg PE=4 SV=1	[more]
V4TRN9_9ROSI	9.8e-19	69.01	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021832mg PE=4 SV=1	[more]
A0A067EMG4_CITSI	9.8e-19	69.01	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025691mg PE=4 SV=1	[more]

BLAST of Cp4.1LG17g10860 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G30695.1	5.9e-07	33.33	FUNCTIONS IN: molecular_function unknown	[more]

BLAST of Cp4.1LG17g10860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778711475\|ref\|XP_011656737.1\|	5.5e-47	72.97	PREDICTED: uncharacterized protein LOC101212225 [Cucumis sativus]	[more]
gi\|659120113\|ref\|XP_008460020.1\|	1.8e-45	71.81	PREDICTED: uncharacterized protein LOC103498959 [Cucumis melo]	[more]
gi\|720008759\|ref\|XP_010258721.1\|	4.0e-21	48.53	PREDICTED: uncharacterized protein LOC104598383 [Nelumbo nucifera]	[more]
gi\|645223426\|ref\|XP_008218625.1\|	9.8e-20	52.85	PREDICTED: uncharacterized protein LOC103318938 isoform X2 [Prunus mume]	[more]
gi\|694329251\|ref\|XP_009355392.1\|	2.2e-19	67.07	PREDICTED: uncharacterized protein LOC103946417 isoform X2 [Pyrus x bretschneide...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0015031	protein transport
GO:0006457	protein folding

Vocabulary: **INTERPRO**
Term	Definition
IPR008881	Trigger_fac_ribosome-bd_bac

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0015031	protein transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g10860.1	Cp4.1LG17g10860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008881	Trigger factor, ribosome-binding, bacterial	PFAM	PF05697	Trigger_N	coord: 82..129 score: 5.
None	No IPR available	PANTHER	PTHR30560	TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE	coord: 9..131 score: 8.7
None	No IPR available	PANTHER	PTHR30560:SF2	SUBFAMILY NOT NAMED	coord: 9..131 score: 8.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG17g10860	Cucsa.348550	Cucumber (Gy14) v1	cgycpeB0912
Cp4.1LG17g10860	CmaCh08G001870	Cucurbita maxima (Rimu)	cmacpeB914
Cp4.1LG17g10860	CmoCh08G001930	Cucurbita moschata (Rifu)	cmocpeB851
Cp4.1LG17g10860	Cla007032	Watermelon (97103) v1	cpewmB344
Cp4.1LG17g10860	Csa6G086160	Cucumber (Chinese Long) v2	cpecuB327
Cp4.1LG17g10860	MELO3C022427	Melon (DHL92) v3.5.1	cpemeB288
Cp4.1LG17g10860	ClCG06G001070	Watermelon (Charleston Gray)	cpewcgB302
Cp4.1LG17g10860	CSPI06G06680	Wild cucumber (PI 183967)	cpecpiB328
Cp4.1LG17g10860	Lsi09G018300	Bottle gourd (USVL1VR-Ls)	cpelsiB253
Cp4.1LG17g10860	MELO3C022427.2	Melon (DHL92) v3.6.1	cpemedB336
Cp4.1LG17g10860	CsaV3_6G007010	Cucumber (Chinese Long) v3	cpecucB0408
Cp4.1LG17g10860	Bhi12G002192	Wax gourd	cpewgoB0380
Cp4.1LG17g10860	CsGy6G006690	Cucumber (Gy14) v2	cgybcpeB788
Cp4.1LG17g10860	Carg05017	Silver-seed gourd	carcpeB0125

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG17g10860	Cucurbita pepo (Zucchini)	cpecpeB175
Cp4.1LG17g10860	Cucurbita maxima (Rimu)	cmacpeB394
Cp4.1LG17g10860	Cucurbita moschata (Rifu)	cmocpeB356