CSPI06G06680 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G06680
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionTrigger factor
LocationChr6 : 5757744 .. 5761016 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCGCCACCGCAACCGCAACCGCAACGGTGACCAACATCGCCTCAGAATTCCCGCGGCCAATATTCACCAAAGTAAGCAATTCAATGCACTTCAGCTTCTTTTCATTCCAAGTATTCTTCATAAGCCAAACCAATAACTCGAATTTTTAAGCTCCACCGTATTTTGCCGCCTTCCTATATAAGTTTAGGATGTTATCATTTTCAAATTTTTTTTTTTTTTTTTTTTTTATGCTTCAGGTTCCTGTTAAAGGCTTTTGCCATAATGCTTTGGTTTGTTTGAACTTTGGTGGCGTTGAATTTGATAATGTACGAGATGGGTTGTGTAGGAGGTAAACATGTACTTTGGTTGGTTTCCAATTTCGATATTGATTCTTAATTTCTTGTTTTTTTTCTTGGGAATTGTAATTACATATGTAGCTTAGAATTGTTCTATTGTAATGGCATTTGAATTGAACATGAAAACTGATGGATAGAAGTGGGAACATTTTTTTCATTTACAGGTCGTCATTTTCTTATAGCTTCCATAAAATTGGTTCCAGATTTTTGTCGAAACCGACGTCCATAGCTAGTTCAGGTAAATCTGCATACTTAGATTGTTATCATATTGATTGAAGTTTTTACAGTTAAAAGACTGAATGACCAATTTTAAACTATAAGAACGAAGTCATTTCATACTTAAAGTTCATCGACTGGGTCATTGGAAATGTTAATATATAGGAATCAAGTTGTTACATGGTAAAGTTCATGGACTAATTAAATTGTTATTTGACAGTATTTTATAACCTTTATAACCATTCTTCTTTTCCCTTCCCTTTGTTGTTTGGGAATCTCATTTATTTTTAATGTAGGTTGGAAAGAGTACAAAAATAGAGTAATTAGGAAGCAAATGACAAAAGTAAAGACAGTTTTACTAGTGAATCGCTGTTTAGTATGCACGAGGAGAGTATGATATACTATCTTCTATAATATGTATTAGAAAATTGTGTCTAGTATATCGCAAATCATGTGTATCCAACTCAGTTGTAGACCTAATAAATCATGGGAAGAAACATAGTAATGGATTTGGTAAAATTTATCCCAGTTTTATCATTAGTGTTAAATCATTAACTATCACCTTTCAGTCAACTCTAGTTGTGCAAAAAGACCCTTTTCTGGATAGATTATGCTGTTTAGTTGATCATCTGTCTTGATTTCATAGGTTTGGAGGCAGCCATCACGGATTACAAAGGCAATCCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAGGAGGAAAACAAGATACAAGTAAGATTTGAATTTCTAGTAATCATTAATAATTTTATTTTGGAAGAGTCCATGCCTCTCAAAGTGTGTTTGGTTATTGCAAATTTTCTTTTCTATGGAAATCCAACTTAAGTGTTACCTCTTACTTCCATGCTCAATCTCAATCACGATTGAGTTCCTATCATCATTCCCTTTAATTCTTTTTTTGATATGCATTTAGTATTAGTGACCTATAAACAATGTTTCTCATGAAATCTAATTGACAGCTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAACTTAGCCCGCTCAGCACCACCCATGCCAGGATTTCGTAAGCAAAAAGGAGGTAGTACCATGATTTTCATCTCCTTCCACTTTGAATGTTACAAACCACTAATTCATCTGCAGCACAAGTCTTTTACGTGTTCACCATCCATATAGAAAAGTATGGGAATTGAGACTGCCTTTCCTATCCTTAAGCGTTCATATGTGTAGCTGCTTTTACAGCTTATAAGTTCTTATTTCTCGTAGCAGATGACTTTATATGGTTTCTAATGCTTTCCTGTCTTCATGCACGTTGATGCTTTACCAGGGAAAACATCAAATGTGAGTTGCTGCTACTCTTTGCTTTTTCTACTTTACCAGCTTTGTGTTTGCAAGAATTTTCAAAGTTGCTGTTTATATCCAAGTCATCTAATACCTTGCCATCTTTGATAATACTCCCAAGTTTGGTATTTTTTTTCTTTTTTTGTAGTGATTTAGTTCTATTGTTTTATTGTTAAAGAAGTTTGAGTCATCAAGTTACAAATCGCATGAGGTGATTGAATAATGTGTTCATTAAAAATTTGTTTTTTTTTTATTTGGATAAATTTGATTTCACACATGATTCATTTCTTCTCAGTATCCTTATTCATTTTTTTGGGCATGTTATGTGAGATTTACATCCTAGTTGCACACAGTATTCTATTCTTCACAAGGTTTTTATTTCTCAATAATTACTTCCTTCAGGTCCCAAAGAGCTTCCTCTTAGAAGTTCTTGGTAAGGACCGAGTCACGAAGTTCGTCATACAAGAAATATTGAACTCAACTATGGTAGATTATGCAAAGAAGGCAAGTTTTCTCCTTATTCCCTTATTCCCAGTGCCTATATGGTGATTGTAACTTAGAGATGTTTTTAAATTGGTTTTTCAAGATGGCTTATAGAATTCAATGATATTTGGGTAAGTAAATTCACTATTTATGAACACATCATTTCAAAAAATTTTAAAATTGTTACGAATTAACTTGGATGATTATGTATATATAGTTAAACTATATTCTTAAATTTTAAATTTTGATTTTATGTGGTTTCTACATCATTAACTAAATCATGACCTGACATGTCTATTAGAAAAATGTCTCGTTGATTTGGCAACCATAGCTAACAAATGATGGAAAGAAGTTACCATTTGATAAAATAGGAGTGGCATGATTTATGGATTGAATTTGATATATTACTTGCAAGTAATTGATATGTTTCCTGTGCTGCCTTCTTTTGTTAACGTTGTCCATTTGCTTTTTTCCATTATCTGTCCTGCTGTGCCCAATCAACCAATGTCTATCTAGTTAGAGCATCTGATATTACCATTTAGTCAATAGTATTGATGTTAGTATCTAACATCACTAACATCAATACTAACAATAAACATTCAAACTTTACATGTGTAACCGAACCTTTTCAAAAACTAGGTAGACAAGACATGGTTCACAGTTAAGTTAGTAATTTATCAAAAAGCGGAAGTTTAGATAAACATAAGCTCAACTTTTTTCTTTTCTTTGGACTCCAACACAGGAAAACATAAATGTGAAGGACAAGAAGGTTAGCACAACACAAACAGCAGATGAACTGAAAGTGTTGTTTAATCCAGGAAAAGAGTTTGGTTTTAATGCCATACTTGAACTTGAATCTGCTTCAGATGCTGAAAGTTGA

mRNA sequence

ATGTCCGCCACCGCAACCGCAACCGCAACGGTGACCAACATCGCCTCAGAATTCCCGCGGCCAATATTCACCAAAGTTCCTGTTAAAGGCTTTTGCCATAATGCTTTGGTTTGTTTGAACTTTGGTGGCGTTGAATTTGATAATGTACGAGATGGGTTGTGTAGGAGGTCGTCATTTTCTTATAGCTTCCATAAAATTGGTTCCAGATTTTTGTCGAAACCGACGTCCATAGCTAGTTCAGGTTTGGAGGCAGCCATCACGGATTACAAAGGCAATCCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAGGAGGAAAACAAGATACAACTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAACTTAGCCCGCTCAGCACCACCCATGCCAGGATTTCGTAAGCAAAAAGGAGGGAAAACATCAAATGTCCCAAAGAGCTTCCTCTTAGAAGTTCTTGGTAAGGACCGAGTCACGAAGTTCGTCATACAAGAAATATTGAACTCAACTATGGTAGATTATGCAAAGAAGGAAAACATAAATGTGAAGGACAAGAAGGTTAGCACAACACAAACAGCAGATGAACTGAAAGTGTTGTTTAATCCAGGAAAAGAGTTTGGTTTTAATGCCATACTTGAACTTGAATCTGCTTCAGATGCTGAAAGTTGA

Coding sequence (CDS)

ATGTCCGCCACCGCAACCGCAACCGCAACGGTGACCAACATCGCCTCAGAATTCCCGCGGCCAATATTCACCAAAGTTCCTGTTAAAGGCTTTTGCCATAATGCTTTGGTTTGTTTGAACTTTGGTGGCGTTGAATTTGATAATGTACGAGATGGGTTGTGTAGGAGGTCGTCATTTTCTTATAGCTTCCATAAAATTGGTTCCAGATTTTTGTCGAAACCGACGTCCATAGCTAGTTCAGGTTTGGAGGCAGCCATCACGGATTACAAAGGCAATCCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAGGAGGAAAACAAGATACAACTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAACTTAGCCCGCTCAGCACCACCCATGCCAGGATTTCGTAAGCAAAAAGGAGGGAAAACATCAAATGTCCCAAAGAGCTTCCTCTTAGAAGTTCTTGGTAAGGACCGAGTCACGAAGTTCGTCATACAAGAAATATTGAACTCAACTATGGTAGATTATGCAAAGAAGGAAAACATAAATGTGAAGGACAAGAAGGTTAGCACAACACAAACAGCAGATGAACTGAAAGTGTTGTTTAATCCAGGAAAAGAGTTTGGTTTTAATGCCATACTTGAACTTGAATCTGCTTCAGATGCTGAAAGTTGA
Homology
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BLAST of CSPI06G06680 vs. Swiss-Prot
Match: TIG_NOSS1 (Trigger factor OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=tig PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.4e-07
Identity = 39/126 (30.95%), Postives = 68/126 (53.97%), Query Frame = 1 

Query: 100 KVVVESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFL 159
           KV  E    ++I L +++T + TQK ++QV+ NL+R+   +PGFRK K      VP+  L
Sbjct: 2   KVTQEKLPASQIGLEIEITPEITQKTYEQVIKNLSRTV-NIPGFRKGK------VPRQVL 61

Query: 160 LEVLGKDRVTKFVIQEILNSTMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFN 219
           L+ LGK  +    ++E+L   +    K+E+I    +      + D+L   + PG+   F 
Sbjct: 62  LQRLGKTHIKAAALEELLQDGIEQAIKQESIAAIGQP-RLRSSFDDLINSYEPGQPLTFT 119

Query: 220 AILELE 226
           A +++E
Sbjct: 122 AAVDVE 119

[Close]
BLAST of CSPI06G06680 vs. Swiss-Prot
Match: TIG_ANAVT (Trigger factor OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=tig PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.4e-07
Identity = 39/126 (30.95%), Postives = 68/126 (53.97%), Query Frame = 1 

Query: 100 KVVVESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFL 159
           KV  E    ++I L +++T + TQK ++QV+ NL+R+   +PGFRK K      VP+  L
Sbjct: 2   KVTQEKLPASQIGLEIEITPEITQKTYEQVIKNLSRTV-NIPGFRKGK------VPRQVL 61

Query: 160 LEVLGKDRVTKFVIQEILNSTMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFN 219
           L+ LGK  +    ++E+L   +    K+E+I    +      + D+L   + PG+   F 
Sbjct: 62  LQRLGKTHIKAAALEELLQDGIEQAIKQESIAAIGQP-RLRSSFDDLINSYEPGQPLTFT 119

Query: 220 AILELE 226
           A +++E
Sbjct: 122 AAVDVE 119

[Close]
BLAST of CSPI06G06680 vs. Swiss-Prot
Match: TIG_SYNP2 (Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=tig PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.2e-07
Identity = 35/125 (28.00%), Postives = 66/125 (52.80%), Query Frame = 1 

Query: 100 KVVVESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFL 159
           KV+ E    +++ L +++  D TQK +D  +  LAR+   +PGFRK K      VPK  L
Sbjct: 2   KVIQEKLPASQVGLEIEVPADVTQKAYDDTVRKLARTVN-LPGFRKGK------VPKQIL 61

Query: 160 LEVLGKDRVTKFVIQEILNSTMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFN 219
           ++ LG +R+   V++++++ ++     +ENI           + D+L   + PG+   F 
Sbjct: 62  IQRLGPNRIKASVLEDLIDDSLKAAIAQENIEALG-NFQLKSSFDDLISAYKPGEASSFK 118

Query: 220 AILEL 225
           A +++
Sbjct: 122 AAVDV 118

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BLAST of CSPI06G06680 vs. TrEMBL
Match: A0A0A0K988_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G086160 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 2.5e-123
Identity = 230/232 (99.14%), Postives = 232/232 (100.00%), Query Frame = 1 

Query: 1   MSATATATATVTNIASEFPRPIFTKVPVKGFCHNALVCLNFGGVEFDNVRDGLCRRSSFS 60
           MSATATATATVTNIASEFPRPIFTKVPVKG+CHNALVCLNFGGVEFDNVRDGLCRRSSFS
Sbjct: 2   MSATATATATVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSFS 61

Query: 61  YSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGD 120
           YSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGD
Sbjct: 62  YSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGD 121

Query: 121 ETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNST 180
           ETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKF+IQEILNST
Sbjct: 122 ETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNST 181

Query: 181 MVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 233
           MVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES
Sbjct: 182 MVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 233

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BLAST of CSPI06G06680 vs. TrEMBL
Match: M5XGM1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011327mg PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.9e-60
Identity = 121/172 (70.35%), Postives = 147/172 (85.47%), Query Frame = 1 

Query: 56  RSSFSYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRV 115
           R  F  S HK G   LS+    A SGLEA+I D +GN ITLK AK+V+ES E+NKIQ+RV
Sbjct: 38  RLLFFCSPHKTGHARLSRLIYAAGSGLEASIADVEGNLITLKTAKIVIESREDNKIQVRV 97

Query: 116 DLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQE 175
           DLTGD+T+KVFD+VLTNLAR+APP+PGFR+QKGGKTS VPKSFLL++LGK+RVTKFVIQE
Sbjct: 98  DLTGDDTEKVFDKVLTNLARTAPPVPGFRRQKGGKTSKVPKSFLLDILGKERVTKFVIQE 157

Query: 176 ILNSTMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESA 228
           I++STM DY KKEN+NVK+ K++TTQTA+ELK+LF PG EFGFNAILELE++
Sbjct: 158 IISSTMGDYVKKENLNVKENKINTTQTAEELKLLFKPGTEFGFNAILELENS 209

[Close]
BLAST of CSPI06G06680 vs. TrEMBL
Match: F6HAX0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0094g00420 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.3e-57
Identity = 119/203 (58.62%), Postives = 154/203 (75.86%), Query Frame = 1 

Query: 32  CHNALV-CLNFGGVEFDNVRDGLCRRSSFSYSFHKIGSRFLSKPTSIASSGLEAAITDYK 91
           CH+ ++ C N   + F + +  LC R  +  + H+   RFLSKP S   SG +A+I D K
Sbjct: 668 CHDHVISCQNTTSISFPHRQQDLCGRLLYPCNLHQGSLRFLSKPISAVGSGSKASIIDPK 727

Query: 92  GNPITLKNAKVVVESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGK 151
            N IT+KNAK+VVES+E+++IQLRVD+ G +TQ+VFD VLTNLARSAPP+PGFR+QKGG 
Sbjct: 728 DNDITIKNAKIVVESQEDDEIQLRVDVAGVDTQRVFDHVLTNLARSAPPIPGFRRQKGGN 787

Query: 152 TSNVPKSFLLEVLGKDRVTKFVIQEILNSTMVDYAKKENINVKDKKVSTTQTADELKVLF 211
           +  VPKSFLL++LG++RVTKFVIQEI+ +T+ DY  KEN+NVKDKK++TT  A+ELK LF
Sbjct: 788 SLYVPKSFLLQILGEERVTKFVIQEIITATVSDYVMKENLNVKDKKITTTPAAEELKSLF 847

Query: 212 NPGKEFGFNAILELE-SASDAES 233
            PG EF FNA LELE S S+A S
Sbjct: 848 TPGNEFRFNATLELEKSESEATS 870

[Close]
BLAST of CSPI06G06680 vs. TrEMBL
Match: I3S2E8_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.7e-53
Identity = 107/161 (66.46%), Postives = 136/161 (84.47%), Query Frame = 1 

Query: 69  RFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGDETQKVFDQ 128
           R L+ P S  +SGLEA+ITD   N   L NA++V+ESE+E+KIQLRVDLTGD+T++VFD+
Sbjct: 71  RHLNTPISAVNSGLEASITDSDENSAILTNAQIVLESEDESKIQLRVDLTGDQTERVFDR 130

Query: 129 VLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMVDYAKKE 188
            L +L R+APP+PGFR QKGGK+S +PKSFL+++LG++RVTKFVIQEILNSTM +YAKKE
Sbjct: 131 TLISLGRTAPPVPGFRMQKGGKSSKIPKSFLVQILGEERVTKFVIQEILNSTMANYAKKE 190

Query: 189 NINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASD 230
           N++VK KKVSTTQTA+ELK  F PGKEFGFN I+E E++ D
Sbjct: 191 NLDVKGKKVSTTQTAEELKKSFTPGKEFGFNVIIEPENSED 231

[Close]
BLAST of CSPI06G06680 vs. TrEMBL
Match: A0A0D2SDS9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G351700 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 4.6e-53
Identity = 105/162 (64.81%), Postives = 139/162 (85.80%), Query Frame = 1 

Query: 69  RFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGDETQKVFDQ 128
           R+  KP S  +SGLEA+I+D     I LK+AK+VVES++ENKIQLRVD+TG ETQKVF++
Sbjct: 48  RYRRKPISALASGLEASISDADDKLIALKDAKIVVESKDENKIQLRVDVTGIETQKVFNK 107

Query: 129 VLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMVDYAKKE 188
           VLT+LAR APP+PGFR++KGGKT+ VP+ FLL++LG++RVTKFV+QEI+ ST+ DY K+E
Sbjct: 108 VLTDLARQAPPIPGFRREKGGKTTKVPREFLLQILGEERVTKFVVQEIVTSTVADYVKEE 167

Query: 189 NINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDA 231
           N+NVKDKKVST+Q+A+ELKV F PGK+F FNA+LELE + ++
Sbjct: 168 NLNVKDKKVSTSQSAEELKVSFTPGKDFWFNAVLELEESENS 209

[Close]
BLAST of CSPI06G06680 vs. TAIR10
Match: AT2G30695.1 (AT2G30695.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 113.6 bits (283), Expect = 1.6e-25
Identity = 53/126 (42.06%), Postives = 90/126 (71.43%), Query Frame = 1 

Query: 103 VESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEV 162
           VE+E  N++++ V ++G++TQ VF+ V   +  +A P+PGFR+ KGGKT N+PK  LLE+
Sbjct: 75  VETETSNEVKVHVQVSGEKTQTVFNHVFEKMVAAAQPIPGFRRVKGGKTPNIPKDVLLEI 134

Query: 163 LGKDRVTKFVIQEILNSTMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAIL 222
           LG  +V K VI++++NS + DY K+E++ V  K+++  Q+ ++L+  F PG+ F F+A +
Sbjct: 135 LGYSKVYKQVIKKLINSAIEDYVKQEDLKV-GKELTVVQSYEDLEETFEPGESFSFDATI 194

Query: 223 ELESAS 229
           +L+ AS
Sbjct: 195 KLQEAS 199

[Close]
BLAST of CSPI06G06680 vs. NCBI nr
Match: gi|778711475|ref|XP_011656737.1| (PREDICTED: uncharacterized protein LOC101212225 [Cucumis sativus])

HSP 1 Score: 449.5 bits (1155), Expect = 3.5e-123
Identity = 230/232 (99.14%), Postives = 232/232 (100.00%), Query Frame = 1 

Query: 1   MSATATATATVTNIASEFPRPIFTKVPVKGFCHNALVCLNFGGVEFDNVRDGLCRRSSFS 60
           MSATATATATVTNIASEFPRPIFTKVPVKG+CHNALVCLNFGGVEFDNVRDGLCRRSSFS
Sbjct: 2   MSATATATATVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSFS 61

Query: 61  YSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGD 120
           YSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGD
Sbjct: 62  YSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGD 121

Query: 121 ETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNST 180
           ETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKF+IQEILNST
Sbjct: 122 ETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNST 181

Query: 181 MVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 233
           MVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES
Sbjct: 182 MVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 233

[Close]
BLAST of CSPI06G06680 vs. NCBI nr
Match: gi|659120113|ref|XP_008460020.1| (PREDICTED: uncharacterized protein LOC103498959 [Cucumis melo])

HSP 1 Score: 427.9 bits (1099), Expect = 1.1e-116
Identity = 222/233 (95.28%), Postives = 227/233 (97.42%), Query Frame = 1 

Query: 1   MSATATATATVTNIAS-EFPRPIFTKVPVKGFCHNALVCLNFGGVEFDNVRDGLCRRSSF 60
           MSATATATATVTNIAS EFPRPIFTKV VKG+CHNALVCLNFGGVEFDNV+DGLCRRSSF
Sbjct: 2   MSATATATATVTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSF 61

Query: 61  SYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTG 120
           SYS H+IGSRFLSKPTSIASSGLEAA+TDYKGN ITLKNAKVVVESEEENKIQLRVDLTG
Sbjct: 62  SYSSHRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLTG 121

Query: 121 DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNS 180
           DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNS
Sbjct: 122 DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNS 181

Query: 181 TMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 233
           TM DYAKKENINVKD KV+TTQTADELKVLFNPGKEFGFNAILELESASDAES
Sbjct: 182 TMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAES 234

[Close]
BLAST of CSPI06G06680 vs. NCBI nr
Match: gi|645223426|ref|XP_008218625.1| (PREDICTED: uncharacterized protein LOC103318938 isoform X2 [Prunus mume])

HSP 1 Score: 253.4 bits (646), Expect = 3.7e-64
Identity = 135/218 (61.93%), Postives = 167/218 (76.61%), Query Frame = 1 

Query: 12  TNIASEFPRPIFTKVPVKGFCHNALVCLNFGGVEFDNVRDGLC--RRSSFSYSFHKIGSR 71
           T + S F      K PV+ +C  AL C N   +       G C  +R  F+ S HK G  
Sbjct: 3   TVVPSHFQSLGLPKFPVRSYCSRALTCQNATRIV------GFCNTQRKLFT-SPHKTGHA 62

Query: 72  FLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGDETQKVFDQV 131
            LS+    A SGLEA+I D +GN ITLK+AK+VVES+E+NKIQ+RVDLTGD+T+KVFD+V
Sbjct: 63  RLSRLICAAGSGLEASIADVEGNLITLKSAKIVVESQEDNKIQVRVDLTGDDTEKVFDKV 122

Query: 132 LTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMVDYAKKEN 191
           LTNLAR+APP+PGFR+QKGGKTS VPKSFLL++LGK+RVTKFVIQEI++STM DY KKEN
Sbjct: 123 LTNLARTAPPVPGFRRQKGGKTSKVPKSFLLDILGKERVTKFVIQEIISSTMGDYVKKEN 182

Query: 192 INVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESA 228
           +NVK+ K++TTQTA+ELK+LF PG EFGFNAILELE +
Sbjct: 183 LNVKENKINTTQTAEELKLLFKPGTEFGFNAILELEDS 213

[Close]
BLAST of CSPI06G06680 vs. NCBI nr
Match: gi|645223424|ref|XP_008218623.1| (PREDICTED: uncharacterized protein LOC103318938 isoform X1 [Prunus mume])

HSP 1 Score: 250.4 bits (638), Expect = 3.1e-63
Identity = 131/203 (64.53%), Postives = 162/203 (79.80%), Query Frame = 1 

Query: 27  PVKGFCHNALVCLNFGGVEFDNVRDGLC--RRSSFSYSFHKIGSRFLSKPTSIASSGLEA 86
           PV+ +C  AL C N   +       G C  +R  F+ S HK G   LS+    A SGLEA
Sbjct: 19  PVRSYCSRALTCQNATRIV------GFCNTQRKLFT-SPHKTGHARLSRLICAAGSGLEA 78

Query: 87  AITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFR 146
           +I D +GN ITLK+AK+VVES+E+NKIQ+RVDLTGD+T+KVFD+VLTNLAR+APP+PGFR
Sbjct: 79  SIADVEGNLITLKSAKIVVESQEDNKIQVRVDLTGDDTEKVFDKVLTNLARTAPPVPGFR 138

Query: 147 KQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMVDYAKKENINVKDKKVSTTQTAD 206
           +QKGGKTS VPKSFLL++LGK+RVTKFVIQEI++STM DY KKEN+NVK+ K++TTQTA+
Sbjct: 139 RQKGGKTSKVPKSFLLDILGKERVTKFVIQEIISSTMGDYVKKENLNVKENKINTTQTAE 198

Query: 207 ELKVLFNPGKEFGFNAILELESA 228
           ELK+LF PG EFGFNAILELE +
Sbjct: 199 ELKLLFKPGTEFGFNAILELEDS 214

[Close]
BLAST of CSPI06G06680 vs. NCBI nr
Match: gi|596187577|ref|XP_007223422.1| (hypothetical protein PRUPE_ppa011327mg [Prunus persica])

HSP 1 Score: 239.6 bits (610), Expect = 5.6e-60
Identity = 121/172 (70.35%), Postives = 147/172 (85.47%), Query Frame = 1 

Query: 56  RSSFSYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRV 115
           R  F  S HK G   LS+    A SGLEA+I D +GN ITLK AK+V+ES E+NKIQ+RV
Sbjct: 38  RLLFFCSPHKTGHARLSRLIYAAGSGLEASIADVEGNLITLKTAKIVIESREDNKIQVRV 97

Query: 116 DLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQE 175
           DLTGD+T+KVFD+VLTNLAR+APP+PGFR+QKGGKTS VPKSFLL++LGK+RVTKFVIQE
Sbjct: 98  DLTGDDTEKVFDKVLTNLARTAPPVPGFRRQKGGKTSKVPKSFLLDILGKERVTKFVIQE 157

Query: 176 ILNSTMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESA 228
           I++STM DY KKEN+NVK+ K++TTQTA+ELK+LF PG EFGFNAILELE++
Sbjct: 158 IISSTMGDYVKKENLNVKENKINTTQTAEELKLLFKPGTEFGFNAILELENS 209

The following BLAST results are available for this feature:
BLAST of CSPI06G06680 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TIG_NOSS12.4e-0730.95Trigger factor OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=tig PE=3 SV=1[more]
TIG_ANAVT2.4e-0730.95Trigger factor OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=tig PE=3... [more]
TIG_SYNP23.2e-0728.00Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=tig... [more]
BLAST of CSPI06G06680 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K988_CUCSA2.5e-12399.14Uncharacterized protein OS=Cucumis sativus GN=Csa_6G086160 PE=4 SV=1[more]
M5XGM1_PRUPE3.9e-6070.35Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011327mg PE=4 SV=1[more]
F6HAX0_VITVI2.3e-5758.62Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0094g00420 PE=4 SV=... [more]
I3S2E8_LOTJA2.7e-5366.46Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
A0A0D2SDS9_GOSRA4.6e-5364.81Uncharacterized protein OS=Gossypium raimondii GN=B456_009G351700 PE=4 SV=1[more]
BLAST of CSPI06G06680 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G30695.11.6e-2542.06 FUNCTIONS IN: molecular_function unknown[more]
BLAST of CSPI06G06680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778711475|ref|XP_011656737.1|3.5e-12399.14PREDICTED: uncharacterized protein LOC101212225 [Cucumis sativus][more]
gi|659120113|ref|XP_008460020.1|1.1e-11695.28PREDICTED: uncharacterized protein LOC103498959 [Cucumis melo][more]
gi|645223426|ref|XP_008218625.1|3.7e-6461.93PREDICTED: uncharacterized protein LOC103318938 isoform X2 [Prunus mume][more]
gi|645223424|ref|XP_008218623.1|3.1e-6364.53PREDICTED: uncharacterized protein LOC103318938 isoform X1 [Prunus mume][more]
gi|596187577|ref|XP_007223422.1|5.6e-6070.35hypothetical protein PRUPE_ppa011327mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008881Trigger_fac_ribosome-bd_bac
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0015031protein transport
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0015031 protein transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G06680.1CSPI06G06680.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008881Trigger factor, ribosome-binding, bacterialGENE3DG3DSA:3.30.70.1050coord: 100..223
score: 2.4
IPR008881Trigger factor, ribosome-binding, bacterialPFAMPF05697Trigger_Ncoord: 100..224
score: 3.7
IPR008881Trigger factor, ribosome-binding, bacterialunknownSSF102735Trigger factor ribosome-binding domaincoord: 100..223
score: 3.79
NoneNo IPR availablePANTHERPTHR30560TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASEcoord: 69..232
score: 4.0
NoneNo IPR availablePANTHERPTHR30560:SF2SUBFAMILY NOT NAMEDcoord: 69..232
score: 4.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G06680Csa6G086150Cucumber (Chinese Long) v2cpicuB314
CSPI06G06680Lsi09G018310Bottle gourd (USVL1VR-Ls)cpilsiB404
CSPI06G06680Cp4.1LG17g10860Cucurbita pepo (Zucchini)cpecpiB328
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G06680Silver-seed gourdcarcpiB0095
CSPI06G06680Silver-seed gourdcarcpiB0804
CSPI06G06680Cucumber (Chinese Long) v3cpicucB364
CSPI06G06680Watermelon (97103) v2cpiwmbB495
CSPI06G06680Wax gourdcpiwgoB548
CSPI06G06680Cucumber (Gy14) v1cgycpiB517
CSPI06G06680Cucurbita maxima (Rimu)cmacpiB379
CSPI06G06680Cucurbita maxima (Rimu)cmacpiB928
CSPI06G06680Cucurbita moschata (Rifu)cmocpiB367
CSPI06G06680Cucurbita moschata (Rifu)cmocpiB907
CSPI06G06680Melon (DHL92) v3.5.1cpimeB433
CSPI06G06680Watermelon (Charleston Gray)cpiwcgB503
CSPI06G06680Watermelon (97103) v1cpiwmB556
CSPI06G06680Melon (DHL92) v3.6.1cpimedB431
CSPI06G06680Cucumber (Gy14) v2cgybcpiB288