CsaV3_6G007010 (gene) Cucumber (Chinese Long) v3

NameCsaV3_6G007010
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionTrigger factor
Locationchr6 : 5733765 .. 5739906 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCAGCAACAGTAGAGTTGATAACTTCCTTAATAACTTGTTTGTACACCTTAGAAGGTCCCAGTATCTCTAATAGAATGTCTCGGGGTATCTGTTGAGAACAAATGATGAACTTATCAGTAACTTCTCATGTCTTCCCAATTAAGATTGTCAGTAGTTACTTCCTGAAAACCAACAGATTGAGAGTAAAGAAAACTTACATTTGGCGTCTTTCCTGACATCCAACGAAGAGCAGCATGTTTCAAGTCCAATGAAATGAATCGAGGAAAAGAAAAAAGAAAATTAAGCAAATCGGCTCTCTGATTGTTTAGAGAGATCGTTTAGTAACAATTTCATCTCTCTAAGATGAAGATATCTCAATCACCCATAACCTTAAACAAGATTGTTTACAAGTGCTCGCCAGAAAATTAATGGAGCCAGAACAATGTTATGATGATTTTGAGAACGTGAAAATGAAGACAACGAGCACTTCAAAAATAAGAAACATGCCTCCGGATATTACCTCCTTTCACTCTTCTAAAACCTGGAATAGGTTGGGCTTCAGCTACCATTCTGTCAAACACGACATTGAAAATTGCTCGAGTTTTGGCTCCTGACACCTCAACACGAATCTGGTTGCAAACTCCAAAAAATGAAACGTTATGGTAATAATAAGAGTTCCTAAATTTGCATTACATTGTTGTGCATACAACAAGGGTTTAAATCCAACTTCAAAACCTGTATTTTCATGCTCGTTTTATTTTGGTCCCCAGAGATTCAAATATTCTATTTCAATCCCTAAATTTTTGCCTCAAAAATCATTTCAGGTGTGAACGTTATTTTTTTATAAAATTTTAACAGAAACCCAAATAGGTATATCTCTTCGTCTTAATTATTTACAAGATGACTGATTTCTGTGGTGGATAGGTACATTGGTCACTAGTAGGTTCAATTTTGGATTTCAAAGTGAAGTAGTTTTTTTTGTTTAAATGACTGATGAATTATTAATGGCAAGGACTAGAATAGTTCTTCGGGATTAAATAGAATGCGTTAAAGTGAAGTAACTAAAACTTATATTTGAAAGTTTAGGGTCAAAAACAAAATAACTGAAAATTCTAAATTCTAAATAGGACTTAAATGAAGAATAAAAATGTGAGGGTGACAGACAAGGATTCTGAGAATAAACTCACCATGTTTCATACCTTTAGTTCTTTATTCTCCTTTGTATTGGTAACATTAGTGACGGAGAAGTCTTCAAACTGAGAAGATGAAACACTCACATTTTCTGCTCAGAATGAAATTAGAAGTTTTATCCAACATAGTCCTTATACAAATGGATAATGTTGAAATTTCTCTAGGAACAGAAGGAAGTGTATTGTAACCTGATAACACAGCACAAGCAGCTGGAAGATATCTGTTATTTTTACTGCAGAGTGAACATATAACTTTTATAATTAGGAACATACACAACTACTTGTCTTTCAAAACCATACAAGTGATTATGGCTACATAAAATTTTATCCAAAAATGTATTGGCCGCCCTGATGATGAATTGGTGATTTCAGATGATATTCCATGTTAACTTCCTGTTTTGAGTGACTAAATAACAGGACAGGATGCGAAGCATCTAATTCAGAAAATGGAGCAGATCATGAGCATTTAGACTTGCATGCACAAAATTTGCTAGTAAAGCTAGTCTCTTATGAGTTTATACGTTTGGTAAACTTCGATGGTTAACCAATCAGCTCCATCATATGAAAGAAAAGTCCAAAGTAAGTCAATTATCTTCTAAAGTCTTTCTAATTCGGGGCACCATCATTCATAGTTTGGGTTATCATTAGAAACATGGTCAAATTGATATGAAATTACCTCAAGGAAATTTTCCTGCTACCATATCTAATTTGACTGGGAAAAGATACACCTATGCAAGTGAGGTTTGGAGTAAAGTAATCTGTTGTCTGCTTATGATATATAGCCTACATACAATTAAGAAAGAAGGCTGAATAAGAATGAATAAACTTCAGATGAATATAAACAGAGACACCAAAATACTAAGCTACTTTGGCACTTTACACAACCTTCCCCATGTGGGATTTTTCCCCCAGAAAACCAACAGCTATTTTAGCACAAATAGTTCTGACCCAATACACAATATTCAGTGTTATTGCTTGTTACCTCTGTTCTTCACTGCTCATTCAATATAAAGCAATAACATACTGGAAAATTCCATGGATTTATGATTCACTGAAAGTAGAGAAACACAAATTGAGGCGGAGAGAAGGGATGGATTACCTTGGGATTTACAGAAAGAAAGAAGTTGGCAGCAGCAATTTGCATTGTCTCTCTCTGTCTCTCTCTCGTCGCTCTTATCCTCTTTCACCCAAACTCAACCTCCGTTTCATTCAAAACAATGGTTTTCGGTTCAACCAAAATTTTCTTTTCTTTTTTCGAAGTTAAAAATTTTATTTTCTTTTTCCTTTTTTTTTAATGGTTTGTAAGTATTTAACGTCCAACCGCAACGGCGTCGTATTACAACTCGGATAAGTCTCTATTCTGTGAGAACCGAAGACACCGAGCGGCGCTTGGAAAAATGATGTCCGCCACCGCAACCGCAACCGCAACGGTGACCAACATCGCCTCAGAATTCCCGCGGCCAATATTCACCAAAGTAAGCAATTCAATGCACTTCAGCTTCTTTTCATTCCAAGTATTCTTCATAAGCCAAACCAATAACTCGAATTTTTAAGCTCCACCGTATTTTGCCGCCTTCCTATATAAGTTTAGGATGTTATCATTTTCAATTTTTTTTTTTTTTTTTTTTTATGCTTCAGGTTCCTGTTAAAGGCTATTGCCATAATGCTCTGGTTTGTTTGAACTTTGGTGGCGTTGAATTTGATAATGTACGAGATGGGTTGTGTAGGAGGTAAACATGTACTTTTGGTTGGTTTCCAATTTCGATATTGATTCTTAATTTCTTGTTTTTTTTCTTGGGAATTGTAATTACATATGTAGCTTAGAATTGTTCTATTGCAATGGCATTTGAATTGAACAGGAAAACTGATGGATAGAAGTGGGAACATTTTTTTCATTTACAGGTCGTCATTTTCTTATAGCTTCCATAAAATTGGTTCCAGATTTTTGTCGAAACCGACGTCCATAGCTAGTTCAGGTAAATCTGCATACTTAGATTGTTATCATATTGATTGAAGTTTTTACAGTTAAAAGACTGAATGACCAATTTTAAACTATAAGAACGAAGTCATTTCATACTTAAAGTTCATCGACTGGGTCATTGGAAATGTTAATATATAGGAATCAAGTTGTTACATGGTAAAGTTCATGGACTAATTAAATTGTTTATTTGACAGTATTTTATAACCTTTATAACCATTCTTCTTTTCCCTTCCCTTTGTTGTTTGGGAATCTCATTTATTTTTAATGTAGGTTGGAAAGAGTACAAAAATAGAGTAATTAGGAAGCAAATGACAAAAGTAAAGACAGTTTTACTAGTGAATCGCTGTTTAGTATGCACGAGGAGAGTATGATATACTATCTTCTATAATATGTATTAGAAAATTGTGTCTAGTATATCGCAAATCATGTGTATCCAACTCAGTTGTAGACCTAATAAATCATGGGAAGAAACATAGTAATGGATTTGGTAAAATTTATCCCAGTTTTGTCATTAGTGTTAAATCATTAACTATCACTTTTCAGTCAACTCTAGTTGTGCAAAAAGACCCTTTTCTGGATAGATTATGCTGTTTAGTTGATCATCTGTCTTGATTTCATAGGTTTGGAGGCAGCCATCACGGATTACAAAGGCAATCCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAGGAGGAAAACAAGATACAAGTAAGATTTGAATTTCTAGTAATCATTAATAATTTTATTTTGGAAGAGTCCCTGCCTCTCAAAGTGTGTTTGGTTATTGCAAATTTTCTTTTCTATGGAAATCCAACTTAAGTGTTACCTCTTACTTCCATGCTCAATCTCAATCAAGATTGAGTTCCTATCATCATTCCCTTTAATACTTTTTTTGATATGCATTTAGTATTAGTGACCTATAAACAATGTCTCTCATGAAATCTAATTGACAGCTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAACTTAGCCCGCTCAGCACCACCCATGCCAGGATTTCGTAAGCAAAAAGGAGGTAGTACCATGACTTTCATCTCCTTCCACTTTGAATGTTACAAACCACTAATTCATCTGCAGCACAAGTCTTTTACGTGTTCACCATCCATATAGAAAAGTATGGGAATTGAGACTGCCTTTCCTATCCTTAAGCGTTCATATGTGTAGCTGCTTTTACAGCTTATAAGTTCTTATTTCTCGTAGCAGATGACTTTATATGGTTTCTAATGCTTTCCTGTCTTCATGCACGTTGATGCTTTACCAGGGAAAACATCAAATGTGAGTTGCTGCTACTCTTTGCTTTTTCTACTTTACCAGCTTTGTGTTTGCAAGAATTTTCAAAGTTGCTGTTTATATCCAAGTCATCTAATACCTTGCCATCTTTGATAATACTCCCAAGTTTGGTATTTTTTTTTTTTCTTTGTAGTGATTTAGTTCTAATGTTTTATTGTTAAAGAAGTTTGAGTCATCAAGTTACAAATCGCATGAGGTGATTGAATAATGTGTTCATTAAAAATTTGTTTTTTTTTATTTGGATAAATTTGATTTCACACATGATTCATTTCTTCTCAGTATCCTTATTCATTTTTTTGGGCATGTTATGTGAGATTTACATCCTAGTTGCACACAGTATTCTATTCTTCACAAGGTTTTTATTTCTCAATAATTACTTCCTTCAGGTCCCAAAAAGCTTCCTCTTAGAAGTTCTTGGTAAGGACCGAGTCACGAAGTTCATCATACAAGAAATATTGAACTCAACTATGGTAGATTATGCAAAGAAGGCAAGTTTTCTCCTTATTCCCTTATTCCCAGTGCTTATATGGTGATTGTAACTTAGAGATGTTTTTAAATTGGTTTTTCAAGATGGCTTATAGAATTCAATGATATTTGGGTAAGTAAATTCACTATTTATGAACACATCATTTCAAAAAATTTAAAAATTGTTACAAATTAACTTGGATGATTATGTATATATAGTTAAACTATATTCTTAAATTTTAAATTTTGATTTTATGTGGTTTCTACATCATTAACTAAATCATGACCTGACATGTCTATTAGAAAAATGTCTCGTTGATTTGGCAACCATAGCTAACAAATGATGGAAAGAAGTTACCATTTGATAAAATAGGAGTGGCATGATTTATGGACTGAATTTGATATATTACTTGCAAGTAATTGATATGTTTCCTGTGCTGCCTTCTTTTGTTAACGTTGTCCATTTGCTTTTTTCCATTATCTGTCCTGCTGTGCCCAATCAACCAATGTCTATCTAGTTAGAGCATCTGATATTACCATTTAGTCAATAGTATTGATGTTAGTATCTAACATCACTAACATCAATACTAACAATAAACATTCAAACTTTACATGTGTAACCGAACCTTTTCAAAAACTAGGTAGACAAGACATGGTTCACAGTTAAGTTAGTAATTTATCAAAAAGCGGAAGTTTAGATAAACATAAGCTCAACTTTTTTCTTTTCTTTGGACTTCAACACAGGAAAACATAAATGTGAAGGACAAGAAGGTTAGCACAACACAAACAGCAGATGAACTGAAAGTGTTGTTTAATCCAGGAAAAGAGTTTGGTTTTAATGCCATACTTGAACTTGAATCTGCTTCAGATGCTGAAAGTTGAGCTTAAACATGTCCCATTTTTTCAAGTGAAGATTTTGTCCCTTTATTCTTCAATGGGCCTCCTGGTGTCAAAAGCCTTGGAAATTTTACTTGAAACTGATGAAGGCTTATGCATAGTTGAATATCAATACATATATTGTAAACGTGAAATGAACAGTTTGGAGTTTGTTCTGATTAATTTATGTTAGATTTTTATTTTCTGTCTAAGTGCTTTTTAGAAATGTTATCAAAAGCTAATCCAAATTTTGAAAAAGTTAAATTCGTTTTCATTTTATTTCAGTTTTGAAAATTAAATTTATG

mRNA sequence

ATGATGTCCGCCACCGCAACCGCAACCGCAACGGTGACCAACATCGCCTCAGAATTCCCGCGGCCAATATTCACCAAAGTTCCTGTTAAAGGCTATTGCCATAATGCTCTGGTTTGTTTGAACTTTGGTGGCGTTGAATTTGATAATGTACGAGATGGGTTGTGTAGGAGGTCGTCATTTTCTTATAGCTTCCATAAAATTGGTTCCAGATTTTTGTCGAAACCGACGTCCATAGCTAGTTCAGGTTTGGAGGCAGCCATCACGGATTACAAAGGCAATCCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAGGAGGAAAACAAGATACAACTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAACTTAGCCCGCTCAGCACCACCCATGCCAGGATTTCGTAAGCAAAAAGGAGGGAAAACATCAAATGTCCCAAAAAGCTTCCTCTTAGAAGTTCTTGGTAAGGACCGAGTCACGAAGTTCATCATACAAGAAATATTGAACTCAACTATGGTAGATTATGCAAAGAAGGAAAACATAAATGTGAAGGACAAGAAGGTTAGCACAACACAAACAGCAGATGAACTGAAAGTGTTGTTTAATCCAGGAAAAGAGTTTGGTTTTAATGCCATACTTGAACTTGAATCTGCTTCAGATGCTGAAAGTTGA

Coding sequence (CDS)

ATGATGTCCGCCACCGCAACCGCAACCGCAACGGTGACCAACATCGCCTCAGAATTCCCGCGGCCAATATTCACCAAAGTTCCTGTTAAAGGCTATTGCCATAATGCTCTGGTTTGTTTGAACTTTGGTGGCGTTGAATTTGATAATGTACGAGATGGGTTGTGTAGGAGGTCGTCATTTTCTTATAGCTTCCATAAAATTGGTTCCAGATTTTTGTCGAAACCGACGTCCATAGCTAGTTCAGGTTTGGAGGCAGCCATCACGGATTACAAAGGCAATCCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAGGAGGAAAACAAGATACAACTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAACTTAGCCCGCTCAGCACCACCCATGCCAGGATTTCGTAAGCAAAAAGGAGGGAAAACATCAAATGTCCCAAAAAGCTTCCTCTTAGAAGTTCTTGGTAAGGACCGAGTCACGAAGTTCATCATACAAGAAATATTGAACTCAACTATGGTAGATTATGCAAAGAAGGAAAACATAAATGTGAAGGACAAGAAGGTTAGCACAACACAAACAGCAGATGAACTGAAAGTGTTGTTTAATCCAGGAAAAGAGTTTGGTTTTAATGCCATACTTGAACTTGAATCTGCTTCAGATGCTGAAAGTTGA

Protein sequence

MMSATATATATVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSFSYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNSTMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES
BLAST of CsaV3_6G007010 vs. NCBI nr
Match: XP_011656737.1 (PREDICTED: uncharacterized protein LOC101212225 [Cucumis sativus] >KGN46335.1 hypothetical protein Csa_6G086160 [Cucumis sativus])

HSP 1 Score: 446.0 bits (1146), Expect = 7.6e-122
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0

Query: 1   MMSATAXXXXXVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSF 60
           MMSATAXXXXXVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSF
Sbjct: 1   MMSATAXXXXXVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSF 60

Query: 61  SYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTG 120
           SYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTG
Sbjct: 61  SYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTG 120

Query: 121 DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNS 180
           DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNS
Sbjct: 121 DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNS 180

Query: 181 TMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 234
           TMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES
Sbjct: 181 TMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 233

BLAST of CsaV3_6G007010 vs. NCBI nr
Match: XP_008460020.1 (PREDICTED: uncharacterized protein LOC103498959 [Cucumis melo])

HSP 1 Score: 421.8 bits (1083), Expect = 1.5e-114
Identity = 222/234 (94.87%), Postives = 227/234 (97.01%), Query Frame = 0

Query: 1   MMSATAXXXXXVTNIA-SEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSS 60
           MMSATAXXXXX TNIA SEFPRPIFTKV VKGYCHNALVCLNFGGVEFDNV+DGLCRRSS
Sbjct: 1   MMSATAXXXXXXTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSS 60

Query: 61  FSYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLT 120
           FSYS H+IGSRFLSKPTSIASSGLEAA+TDYKGN ITLKNAKVVVESEEENKIQLRVDLT
Sbjct: 61  FSYSSHRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLT 120

Query: 121 GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILN 180
           GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKF+IQEILN
Sbjct: 121 GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILN 180

Query: 181 STMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 234
           STM DYAKKENINVKD KV+TTQTADELKVLFNPGKEFGFNAILELESASDAES
Sbjct: 181 STMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAES 234

BLAST of CsaV3_6G007010 vs. NCBI nr
Match: XP_022155406.1 (uncharacterized protein LOC111022553 [Momordica charantia])

HSP 1 Score: 368.6 bits (945), Expect = 1.5e-98
Identity = 188/232 (81.03%), Postives = 207/232 (89.22%), Query Frame = 0

Query: 1   MMSATAXXXXXVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSF 60
           M SATA     VTN+ASE+ R  F KVPVKGYC + L C N GGVEFDNV++GLCRRSSF
Sbjct: 1   MASATA----TVTNLASEYRRASFIKVPVKGYCRSVLACSNSGGVEFDNVQNGLCRRSSF 60

Query: 61  SYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTG 120
           S S HK+GSRFLS+PTSIASSGLEAAITDYKGN I LKNAK+VVESE+EN IQLRVDL+G
Sbjct: 61  SCSPHKLGSRFLSRPTSIASSGLEAAITDYKGNAIALKNAKIVVESEDENLIQLRVDLSG 120

Query: 121 DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNS 180
           DETQK+FDQVLTNLARSAPPMPGFR QKGGKTSNVPKSFLLEVLG++RVTKF+IQEILNS
Sbjct: 121 DETQKIFDQVLTNLARSAPPMPGFRMQKGGKTSNVPKSFLLEVLGEERVTKFVIQEILNS 180

Query: 181 TMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAE 233
           TM DYAKKEN+NVKDKKV+TTQTADELK+LF PGKEFGFNAILELESA+  +
Sbjct: 181 TMADYAKKENVNVKDKKVNTTQTADELKLLFTPGKEFGFNAILELESANSED 228

BLAST of CsaV3_6G007010 vs. NCBI nr
Match: XP_023004174.1 (uncharacterized protein LOC111497577 [Cucurbita maxima])

HSP 1 Score: 364.4 bits (934), Expect = 2.9e-97
Identity = 192/233 (82.40%), Postives = 207/233 (88.84%), Query Frame = 0

Query: 1   MMSATAXXXXXVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSF 60
           M SATA XXX V NIASEF RP+FTKVPV G   NAL+C+NFGGVEF+NV+D LC RSS 
Sbjct: 1   MASATATXXXTVANIASEFRRPVFTKVPVNGRRRNALICMNFGGVEFENVQDRLCTRSSV 60

Query: 61  SYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTG 120
           SYS   +GSRFLS+PT+IASSGLEAAITDYKG  ITLKNAK+VVESE+ENKIQLRV+LTG
Sbjct: 61  SYSLLVVGSRFLSRPTAIASSGLEAAITDYKG-AITLKNAKIVVESEDENKIQLRVNLTG 120

Query: 121 DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNS 180
           DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKF+IQEILNS
Sbjct: 121 DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNS 180

Query: 181 TMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 234
           TM DYAKKENI VKDK V+TTQT DELKVLF PGKEFGFNAILELE   + +S
Sbjct: 181 TMADYAKKENIKVKDKMVNTTQTEDELKVLFRPGKEFGFNAILELELEPELDS 232

BLAST of CsaV3_6G007010 vs. NCBI nr
Match: XP_022960370.1 (uncharacterized protein LOC111461115 [Cucurbita moschata])

HSP 1 Score: 353.2 bits (905), Expect = 6.7e-94
Identity = 188/224 (83.93%), Postives = 198/224 (88.39%), Query Frame = 0

Query: 1   MMSATAXXXXXVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSF 60
           M SATA     V NIASEF RP+FTKVPV G   NALVCLNFGGVEF+NV+D LC RSS 
Sbjct: 1   MASATA----TVANIASEFRRPVFTKVPVNGRRRNALVCLNFGGVEFENVQDRLCTRSSV 60

Query: 61  SYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTG 120
           SYS   +GSRFLS+PT+IASSGLEAAITDYKG  ITLKNAK+VVESE+ENKIQLRVDLTG
Sbjct: 61  SYSPLVVGSRFLSRPTAIASSGLEAAITDYKG-AITLKNAKIVVESEDENKIQLRVDLTG 120

Query: 121 DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNS 180
           DETQKVFDQVLTNLARSAP MPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKF+IQEILNS
Sbjct: 121 DETQKVFDQVLTNLARSAPLMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNS 180

Query: 181 TMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILE 225
           TMVDYAKKENI VKDK V+TTQT DELK LF PGKEFGFNAILE
Sbjct: 181 TMVDYAKKENIKVKDKMVNTTQTEDELKALFRPGKEFGFNAILE 219

BLAST of CsaV3_6G007010 vs. TAIR10
Match: AT2G30695.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 113.2 bits (282), Expect = 2.1e-25
Identity = 52/126 (41.27%), Postives = 90/126 (71.43%), Query Frame = 0

Query: 104 VESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEV 163
           VE+E  N++++ V ++G++TQ VF+ V   +  +A P+PGFR+ KGGKT N+PK  LLE+
Sbjct: 75  VETETSNEVKVHVQVSGEKTQTVFNHVFEKMVAAAQPIPGFRRVKGGKTPNIPKDVLLEI 134

Query: 164 LGKDRVTKFIIQEILNSTMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAIL 223
           LG  +V K +I++++NS + DY K+E++ V  K+++  Q+ ++L+  F PG+ F F+A +
Sbjct: 135 LGYSKVYKQVIKKLINSAIEDYVKQEDLKV-GKELTVVQSYEDLEETFEPGESFSFDATI 194

Query: 224 ELESAS 230
           +L+ AS
Sbjct: 195 KLQEAS 199

BLAST of CsaV3_6G007010 vs. Swiss-Prot
Match: sp|Q3M725|TIG_ANAVT (Trigger factor OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=tig PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.3e-07
Identity = 39/126 (30.95%), Postives = 68/126 (53.97%), Query Frame = 0

Query: 101 KVVVESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFL 160
           KV  E    ++I L +++T + TQK ++QV+ NL+R+   +PGFRK K      VP+  L
Sbjct: 2   KVTQEKLPASQIGLEIEITPEITQKTYEQVIKNLSRTV-NIPGFRKGK------VPRQVL 61

Query: 161 LEVLGKDRVTKFIIQEILNSTMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFN 220
           L+ LGK  +    ++E+L   +    K+E+I    +      + D+L   + PG+   F 
Sbjct: 62  LQRLGKTHIKAAALEELLQDGIEQAIKQESIAAIGQP-RLRSSFDDLINSYEPGQPLTFT 119

Query: 221 AILELE 227
           A +++E
Sbjct: 122 AAVDVE 119

BLAST of CsaV3_6G007010 vs. Swiss-Prot
Match: sp|Q8YQX9|TIG_NOSS1 (Trigger factor OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=tig PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.3e-07
Identity = 39/126 (30.95%), Postives = 68/126 (53.97%), Query Frame = 0

Query: 101 KVVVESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFL 160
           KV  E    ++I L +++T + TQK ++QV+ NL+R+   +PGFRK K      VP+  L
Sbjct: 2   KVTQEKLPASQIGLEIEITPEITQKTYEQVIKNLSRTV-NIPGFRKGK------VPRQVL 61

Query: 161 LEVLGKDRVTKFIIQEILNSTMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFN 220
           L+ LGK  +    ++E+L   +    K+E+I    +      + D+L   + PG+   F 
Sbjct: 62  LQRLGKTHIKAAALEELLQDGIEQAIKQESIAAIGQP-RLRSSFDDLINSYEPGQPLTFT 119

Query: 221 AILELE 227
           A +++E
Sbjct: 122 AAVDVE 119

BLAST of CsaV3_6G007010 vs. Swiss-Prot
Match: sp|B1XL18|TIG_SYNP2 (Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=tig PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.3e-07
Identity = 34/125 (27.20%), Postives = 66/125 (52.80%), Query Frame = 0

Query: 101 KVVVESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFL 160
           KV+ E    +++ L +++  D TQK +D  +  LAR+   +PGFRK K      VPK  L
Sbjct: 2   KVIQEKLPASQVGLEIEVPADVTQKAYDDTVRKLARTV-NLPGFRKGK------VPKQIL 61

Query: 161 LEVLGKDRVTKFIIQEILNSTMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFN 220
           ++ LG +R+   +++++++ ++     +ENI           + D+L   + PG+   F 
Sbjct: 62  IQRLGPNRIKASVLEDLIDDSLKAAIAQENIEALG-NFQLKSSFDDLISAYKPGEASSFK 118

Query: 221 AILEL 226
           A +++
Sbjct: 122 AAVDV 118

BLAST of CsaV3_6G007010 vs. Swiss-Prot
Match: sp|B2IT89|TIG_NOSP7 (Trigger factor OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=tig PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.0e-04
Identity = 35/126 (27.78%), Postives = 66/126 (52.38%), Query Frame = 0

Query: 101 KVVVESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFL 160
           KV  E    ++I L +++T + T++ ++QV+ NLA +A  +PGFR+ K      VP+  L
Sbjct: 2   KVTQEKLPASQIGLEIEITPEITKQTYEQVIKNLASTA-NIPGFRRGK------VPRPIL 61

Query: 161 LEVLGKDRVTKFIIQEILNSTMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFN 220
           L+ LG  R+    ++E++   +    K+E I    +      + ++L   + PGK     
Sbjct: 62  LQRLGTTRIKAAALEELIQDGIEQAVKQEAIPAIGQP-QLRSSFEDLINNYEPGKPLTIL 119

Query: 221 AILELE 227
           A +++E
Sbjct: 122 AAVDVE 119

BLAST of CsaV3_6G007010 vs. TrEMBL
Match: tr|A0A0A0K988|A0A0A0K988_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G086160 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 5.0e-122
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0

Query: 1   MMSATAXXXXXVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSF 60
           MMSATAXXXXXVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSF
Sbjct: 1   MMSATAXXXXXVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSF 60

Query: 61  SYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTG 120
           SYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTG
Sbjct: 61  SYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTG 120

Query: 121 DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNS 180
           DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNS
Sbjct: 121 DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNS 180

Query: 181 TMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 234
           TMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES
Sbjct: 181 TMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 233

BLAST of CsaV3_6G007010 vs. TrEMBL
Match: tr|A0A1S3CBN2|A0A1S3CBN2_CUCME (uncharacterized protein LOC103498959 OS=Cucumis melo OX=3656 GN=LOC103498959 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.0e-114
Identity = 222/234 (94.87%), Postives = 227/234 (97.01%), Query Frame = 0

Query: 1   MMSATAXXXXXVTNIA-SEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSS 60
           MMSATAXXXXX TNIA SEFPRPIFTKV VKGYCHNALVCLNFGGVEFDNV+DGLCRRSS
Sbjct: 1   MMSATAXXXXXXTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSS 60

Query: 61  FSYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLT 120
           FSYS H+IGSRFLSKPTSIASSGLEAA+TDYKGN ITLKNAKVVVESEEENKIQLRVDLT
Sbjct: 61  FSYSSHRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLT 120

Query: 121 GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILN 180
           GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKF+IQEILN
Sbjct: 121 GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILN 180

Query: 181 STMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 234
           STM DYAKKENINVKD KV+TTQTADELKVLFNPGKEFGFNAILELESASDAES
Sbjct: 181 STMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAES 234

BLAST of CsaV3_6G007010 vs. TrEMBL
Match: tr|A0A251RKJ4|A0A251RKJ4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G586900 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 9.7e-65
Identity = 136/217 (62.67%), Postives = 167/217 (76.96%), Query Frame = 0

Query: 13  TNIASEFPRPIFTKVPVKGYCHNALVCLNFGG-VEFDNVRDGLCRRSSFSYSFHKIGSRF 72
           T + S F      K PV+ YC  AL C N    VEF N      +R  F+ S HK G   
Sbjct: 3   TVVPSHFQSLGLPKFPVRSYCSRALTCQNATRIVEFCNT-----QRKLFT-SPHKTGHAR 62

Query: 73  LSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGDETQKVFDQVL 132
           LS+    A SGLEA+I D +GN ITLK AK+V+ES E+NKIQ+RVDLTGD+T+KVFD+VL
Sbjct: 63  LSRLIYAAGSGLEASIADVEGNLITLKTAKIVIESREDNKIQVRVDLTGDDTEKVFDKVL 122

Query: 133 TNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNSTMVDYAKKENI 192
           TNLAR+APP+PGFR+QKGGKTS VPKSFLL++LGK+RVTKF+IQEI++STM DY KKEN+
Sbjct: 123 TNLARTAPPVPGFRRQKGGKTSKVPKSFLLDILGKERVTKFVIQEIISSTMGDYVKKENL 182

Query: 193 NVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESA 229
           NVK+ K++TTQTA+ELK+LF PG EFGFNAILELE++
Sbjct: 183 NVKENKINTTQTAEELKLLFKPGTEFGFNAILELENS 213

BLAST of CsaV3_6G007010 vs. TrEMBL
Match: tr|A0A251RKM3|A0A251RKM3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G586900 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.4e-63
Identity = 132/202 (65.35%), Postives = 162/202 (80.20%), Query Frame = 0

Query: 28  PVKGYCHNALVCLNFGG-VEFDNVRDGLCRRSSFSYSFHKIGSRFLSKPTSIASSGLEAA 87
           PV+ YC  AL C N    VEF N      +R  F+ S HK G   LS+    A SGLEA+
Sbjct: 19  PVRSYCSRALTCQNATRIVEFCNT-----QRKLFT-SPHKTGHARLSRLIYAAGSGLEAS 78

Query: 88  ITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRK 147
           I D +GN ITLK AK+V+ES E+NKIQ+RVDLTGD+T+KVFD+VLTNLAR+APP+PGFR+
Sbjct: 79  IADVEGNLITLKTAKIVIESREDNKIQVRVDLTGDDTEKVFDKVLTNLARTAPPVPGFRR 138

Query: 148 QKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNSTMVDYAKKENINVKDKKVSTTQTADE 207
           QKGGKTS VPKSFLL++LGK+RVTKF+IQEI++STM DY KKEN+NVK+ K++TTQTA+E
Sbjct: 139 QKGGKTSKVPKSFLLDILGKERVTKFVIQEIISSTMGDYVKKENLNVKENKINTTQTAEE 198

Query: 208 LKVLFNPGKEFGFNAILELESA 229
           LK+LF PG EFGFNAILELE++
Sbjct: 199 LKLLFKPGTEFGFNAILELENS 214

BLAST of CsaV3_6G007010 vs. TrEMBL
Match: tr|A0A2P4KWJ5|A0A2P4KWJ5_QUESU (Trigger factor OS=Quercus suber OX=58331 GN=CFP56_31076 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.3e-61
Identity = 129/220 (58.64%), Postives = 161/220 (73.18%), Query Frame = 0

Query: 12  VTNIASEF---PRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSFSYSFHKIG 71
           +T I SEF   PR       V   C + L C       F +++  LCR   F  S  K G
Sbjct: 37  MTTIPSEFQQQPRTSTKSCRVTIGCSHVLTCPKSTCTNFCDMQHYLCRSLLFPSSPQKRG 96

Query: 72  SRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGDETQKVFD 131
              L+KP S +SSGLEA++TD KG  I LK+AK+V+ES++ENK+Q++VDLTGDET+KVFD
Sbjct: 97  LTLLTKPISASSSGLEASVTDQKGKTIKLKSAKIVIESQDENKMQIQVDLTGDETEKVFD 156

Query: 132 QVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNSTMVDYAKK 191
           QVLTNLAR+APP+PGFR+QKGGKTS VPKSFLL++LG++RVTKF+IQEI+NSTM DY K 
Sbjct: 157 QVLTNLARTAPPVPGFRRQKGGKTSQVPKSFLLQMLGEERVTKFVIQEIVNSTMDDYVKN 216

Query: 192 ENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESA 229
           EN+NVKD K++T Q  +EL   F PGKEF FNAILELE +
Sbjct: 217 ENLNVKDNKINTIQKVEELMSSFTPGKEFRFNAILELEGS 256

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011656737.17.6e-122100.00PREDICTED: uncharacterized protein LOC101212225 [Cucumis sativus] >KGN46335.1 hy... [more]
XP_008460020.11.5e-11494.87PREDICTED: uncharacterized protein LOC103498959 [Cucumis melo][more]
XP_022155406.11.5e-9881.03uncharacterized protein LOC111022553 [Momordica charantia][more]
XP_023004174.12.9e-9782.40uncharacterized protein LOC111497577 [Cucurbita maxima][more]
XP_022960370.16.7e-9483.93uncharacterized protein LOC111461115 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT2G30695.12.1e-2541.27FUNCTIONS IN: molecular_function unknown[more]
Match NameE-valueIdentityDescription
sp|Q3M725|TIG_ANAVT3.3e-0730.95Trigger factor OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) OX=240292 G... [more]
sp|Q8YQX9|TIG_NOSS13.3e-0730.95Trigger factor OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690... [more]
sp|B1XL18|TIG_SYNP24.3e-0727.20Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=320... [more]
sp|B2IT89|TIG_NOSP72.0e-0427.78Trigger factor OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0K988|A0A0A0K988_CUCSA5.0e-122100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G086160 PE=4 SV=1[more]
tr|A0A1S3CBN2|A0A1S3CBN2_CUCME1.0e-11494.87uncharacterized protein LOC103498959 OS=Cucumis melo OX=3656 GN=LOC103498959 PE=... [more]
tr|A0A251RKJ4|A0A251RKJ4_PRUPE9.7e-6562.67Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G586900 PE=4 SV=1[more]
tr|A0A251RKM3|A0A251RKM3_PRUPE1.4e-6365.35Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G586900 PE=4 SV=1[more]
tr|A0A2P4KWJ5|A0A2P4KWJ5_QUESU1.3e-6158.64Trigger factor OS=Quercus suber OX=58331 GN=CFP56_31076 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
GO:0006457protein folding
Vocabulary: INTERPRO
TermDefinition
IPR005215Trig_fac
IPR036611Trigger_fac_ribosome-bd_sf
IPR008881Trigger_fac_ribosome-bd_bac
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0015031 protein transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G007010.1CsaV3_6G007010.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008881Trigger factor, ribosome-binding, bacterialPFAMPF05697Trigger_Ncoord: 101..225
e-value: 1.2E-13
score: 51.6
IPR036611Trigger factor ribosome-binding domain superfamilyGENE3DG3DSA:3.30.70.1050coord: 102..225
e-value: 2.0E-9
score: 39.6
IPR036611Trigger factor ribosome-binding domain superfamilySUPERFAMILYSSF102735Trigger factor ribosome-binding domaincoord: 101..224
NoneNo IPR availablePANTHERPTHR30560:SF2SUBFAMILY NOT NAMEDcoord: 69..230
IPR005215Trigger factorPANTHERPTHR30560TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASEcoord: 69..230

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_6G007010Cp4.1LG17g10860Cucurbita pepo (Zucchini)cpecucB0408
The following gene(s) are paralogous to this gene:

None