Carg05017 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05017
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Trigger factor
Location	Cucurbita_argyrosperma_scaffold_060 : 836512 .. 839989 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAGAAACTTTCAAGCTGAGGCGCGCTTGAAAAAAATGGCGTCCGCAACTGCAACGGTGGCCAACATCGCTTTAGAATTCCGGCGGCCAGTATTCACCAAAGTAAGTAATTCTATCCATATTCTCAGTAGCTTAACCAATGAATCGAATCTCGAAGCTCCACCGCATTTTTCCGCCTTCCTTCCGATATGTTTGGGATATTAGCATTTTCAAATTATTTTTTGTGTTGCAGGTTCCTGTTAATGGCCGCCGCCGCAATGCTCTGGTTTATATGAACTTCGGAGGCGTTGAATTTGTAAATGTACAGGATAGGCTGTGTACGAGGTAAACATGTATTTTGATTTTTTTATTTGTTTATTGAGCGGTGTAGTGATGGATATTGCTTGTTCAGTTTCGATTTGGTGAATTGTGCATAGAAACTGATGTATAGAAGTAGGAACGTTTCTTCATTTCCAGGTCCTCAGTTTCTTATAGTCCCCTTGTAGTTGGTTCCAGATTTTTGTCCAGACCGATGGCCATAGGTAGTTCAGGTAATTCTGATTCTAGTCATGAACTCCAGTATGTTACTATTTAGCCTATGTATATTCAAATTTGTAATGGTTTAGACCTATTGTGAACTACGAGGACTAAATAATGTTCATTGACCACATCGTTACAAGTTTTAAAATACAGGAATCAAATTGTTCATGGACCAAATGATCATCAAATGTATTTTTTAACTTTATTTTTCTTCTTCTTTTCTTTCAGAATTGATAACCATTTGGTATTCAAAGTATAAGCTTATAGACATTACTTCCACCTGTGAGGTTCTTTGTTTTGTTATCTGCCTTCTAAAAAGTGTGTTCAAAATTCAAGCCAAATTTGATTTTGTTATTGGAATTGACTAAGAATTTAAATGTTTCTTTAAGAAAGATGGAAACCATAGTAAAGAATTTGTTAGAAAATAAGCATAAACTACATAAACGAAAAGCTAGAAACAAAATCGTTATTGATTCGGGTCATAGTAATTTGGAACCTATGACAAAAGTAGGACAGTTTTTACCAGTAAATCTTGTCTTGCCTGCACTCAGAAGATATTAGTTTCTTCTATATCATGTTTCAAAAAAATTGTGTTGAGTATATTGCAAATCGTGTTTAAGAAACACAATGATGGATTTGGTAAAAGTTATCTCTGTTTTGTTGATCTGTTTTGATGTCATAGGTTTGGAGGCAGCCATCACAGATTACAAAGGTGCTATAACCTTAAAAAATGCTAAAATAGTTGTAGAATCTGAGGATGAAAACAAGATACAGGTAACACTACCTATGTGAACTAGTTGTAGCATGCATAACATTTTTGGTTGTAGCATAGAGTTTTACCACTTTGATTTTCATCCCAAAGGAATTTACATCTAATACTTCTATAGCATTTTAGAATACTTTCCTCTGACAAGTTGTTGAAGATCTCATTCTGCCCGTAAACTATTCAACTTCGTTTCTAGTTTCGCTTTCAAGAGTAGATTTAGTGCTGTTTGATGCATGCTGATACAAATCTTACAAGATGATATGTATATTTCATATTGGAAATTTGGTGGAAGCTTTTATCCTCTTAAGTCATATAAATTATACATATAGTTCCCCATATGAAATACACATCCTACCAAATGTATTTATATTTCATATGGCAAAATGGAGGCTAATCTATTACTTAGGCCTTGCATTCCAAAACTTGATAGAACATGGTTTATTTTATTTATGAACAAGATGGTAAAACTTAGAGGGATAATCAGAGATTTCTCTTCCCCCCAACTGGCAACTACCATACTTAACTCATGAAAAGCTTACATCCTTAAGCGACTACCGTCTCGTTATCTATTCTCTTGCTCTCCCAAACCTCACTTTGTTACAACTTGTGCCCACGGTAGGAAATCAAGATGTAAGGATTGGGTACATATCTTTGATAAATGTCTAATGAAATCTAATGAACAGCTAAGAGTGGACTTGACTGGGGATGAGACGCAAAAGGTATTCGATCAGGTTTTGACGAATCTGGCCCGCTCAGCCCCGCCGATGCCAGGATTTCGTAAGCAAAAAGGAGGTAGTACCGTGATTTTCCTCCCCCCTTCACTGTGAATGTTGTTACAACCGTTCATTCATACTGTATAGACAAGCATGGGAATTGAGAAGTACCGTTTCTATAATTACAAGTTCATATATGTAGCTGCTTTTACATCTCCTAAATTTTTATGTTTAGTAACAGATGACCTGACTTTATATGGTTTCTAATGTTTTCGTGTTTTCATGCCTGTTGATGCTTGGCCAGGGAAAACTTCAAATGTGAGTTGCTTCTCTTTGCCTTTTCAACTTTCCTCTTTGGGTTTCCAAGTACTTTTAAGTTATGTCTTTTTTTTCTCAATATCGTTCTATTCTTATACATATTGTTCTATTCTTCCCCAAGGTTTCTATTTGTAAATAACGAATTCCTTCAGGTCCCAAAAAGCTTCCTCTTAGAAGTCCTTGGTAAGGATCGGGTCACAAAGTTCGTCATACAAGAAATATTAAACTCAACTATGGCAGATTATGCAAAGAAGGCAAGTTGTATCCTCATTGCTTTGCTCCTTTCTTATACCTACTGCCTGTGTGCTGATTGTAATTTGGGAGCTGTTTTTGAATTGGTTTTCCTAGATGCCTTTTAGAAGTTAATTATATTGGGTATATTGAAATCACTATTCGTTAACTATTTACAAACTTATAATTTTGATGATTGTGTCTGTATAGTTTCTATATCTCTATGTTTTTAAAAGTTTCAATTGTGATTTTACGTGAAAGAGCGTTACCATCATTAAGCTGATGACATGACACATGAGATCCCACATTAGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGAGGCGTTTTAAAAACCTTGAGAGAAGTCCAAAAGAGAAAGTCCAAAGAGGAGAATATTTGCGAGCGGTGGGCTTGGGCTTGGGCGGTTACATGACTTGTCTACTGTGCATATATTTTGTTAATTTGGCACAACGTAATAGACAAATGATAGAAAGAAGTCAAACAATTAGATAAAGGAGGACGTAGTTTATGAAATGAATTTGATACAGCTCGTTTTTCTTTTGTTTCGACTCCAACGCAGGAAAATATAAAGGTGAAGGACAAGATGGTTAACACAACTCAAACAGAAGATGAACTGAAAGCGTTGTTCAGACCTGGAAAAGAGTTTGGTTTCAATGCTATACTTGAACTTGAACTTGAACTTGAACCTGAACTTGAACCTGAACTTGAGTCTGCTTCAGAGGATGAAAATTGAGCCAAACAGGTCCCCCTTTCCAAGTGAAGATTTTCTCCACTTGGTTCTTTCTTGGCCCTCTTTCAAAGTTTTGGAAATATTTTGTTGAAGGAATAAATATTTGATTATCCATAGTGATGCATTGATCAGTATTAATGAGTTCTAGTTACT

mRNA sequence

AAGAGAAACTTTCAAGCTGAGGCGCGCTTGAAAAAAATGGCGTCCGCAACTGCAACGGTGGCCAACATCGCTTTAGAATTCCGGCGGCCAGTATTCACCAAAGTTCCTGTTAATGGCCGCCGCCGCAATGCTCTGGTTTATATGAACTTCGGAGGCGTTGAATTTGTAAATGTACAGGATAGGCTGTGTACGAGGTCCTCAGTTTCTTATAGTCCCCTTGTAGTTGGTTCCAGATTTTTGTCCAGACCGATGGCCATAGGTAGTTCAGGTTTGGAGGCAGCCATCACAGATTACAAAGGTGCTATAACCTTAAAAAATGCTAAAATAGTTGTAGAATCTGAGGATGAAAACAAGATACAGCTAAGAGTGGACTTGACTGGGGATGAGACGCAAAAGGTATTCGATCAGGTTTTGACGAATCTGGCCCGCTCAGCCCCGCCGATGCCAGGATTTCGTAAGCAAAAAGGAGGGAAAACTTCAAATGTCCCAAAAAGCTTCCTCTTAGAAGTCCTTGGTAAGGATCGGGAAAATATAAAGGTGAAGGACAAGATGGTTAACACAACTCAAACAGAAGATGAACTGAAAGCGTTGTTCAGACCTGGAAAAGAGTTTGGTTTCAATGCTATACTTGAACTTGAACTTGAACTTGAACCTGAACTTGAACCTGAACTTGAGTCTGCTTCAGAGGATGAAAATTGAGCCAAACAGGTCCCCCTTTCCAAGTGAAGATTTTCTCCACTTGGTTCTTTCTTGGCCCTCTTTCAAAGTTTTGGAAATATTTTGTTGAAGGAATAAATATTTGATTATCCATAGTGATGCATTGATCAGTATTAATGAGTTCTAGTTACT

Coding sequence (CDS)

ATGGCGTCCGCAACTGCAACGGTGGCCAACATCGCTTTAGAATTCCGGCGGCCAGTATTCACCAAAGTTCCTGTTAATGGCCGCCGCCGCAATGCTCTGGTTTATATGAACTTCGGAGGCGTTGAATTTGTAAATGTACAGGATAGGCTGTGTACGAGGTCCTCAGTTTCTTATAGTCCCCTTGTAGTTGGTTCCAGATTTTTGTCCAGACCGATGGCCATAGGTAGTTCAGGTTTGGAGGCAGCCATCACAGATTACAAAGGTGCTATAACCTTAAAAAATGCTAAAATAGTTGTAGAATCTGAGGATGAAAACAAGATACAGCTAAGAGTGGACTTGACTGGGGATGAGACGCAAAAGGTATTCGATCAGGTTTTGACGAATCTGGCCCGCTCAGCCCCGCCGATGCCAGGATTTCGTAAGCAAAAAGGAGGGAAAACTTCAAATGTCCCAAAAAGCTTCCTCTTAGAAGTCCTTGGTAAGGATCGGGAAAATATAAAGGTGAAGGACAAGATGGTTAACACAACTCAAACAGAAGATGAACTGAAAGCGTTGTTCAGACCTGGAAAAGAGTTTGGTTTCAATGCTATACTTGAACTTGAACTTGAACTTGAACCTGAACTTGAACCTGAACTTGAGTCTGCTTCAGAGGATGAAAATTGA

Protein sequence

MASATATVANIALEFRRPVFTKVPVNGRRRNALVYMNFGGVEFVNVQDRLCTRSSVSYSPLVVGSRFLSRPMAIGSSGLEAAITDYKGAITLKNAKIVVESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRENIKVKDKMVNTTQTEDELKALFRPGKEFGFNAILELELELEPELEPELESASEDEN

Homology

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BLAST of Carg05017 vs. NCBI nr
Match: XP_022960370.1 (uncharacterized protein LOC111461115 [Cucurbita moschata])

HSP 1 Score: 356.7 bits (914), Expect = 5.7e-95
Identity = 192/219 (87.67%), Postives = 193/219 (88.13%), Query Frame = 0


Query: 1   MASATATVANIALEFRRPVFTKVPVNGRRRNALVYMNFGGVEFVNVQDRLCTRSSVSYSP 60
           MASATATVANIA EFRRPVFTKVPVNGRRRNALV +NFGGVEF NVQDRLCTRSSVSYSP
Sbjct: 1   MASATATVANIASEFRRPVFTKVPVNGRRRNALVCLNFGGVEFENVQDRLCTRSSVSYSP 60

Query: 61  LVVGSRFLSRPMAIGSSGLEAAITDYKGAITLKNAKIVVESEDENKIQLRVDLTGDETQK 120
           LVVGSRFLSRP AI SSGLEAAITDYKGAITLKNAKIVVESEDENKIQLRVDLTGDETQK
Sbjct: 61  LVVGSRFLSRPTAIASSGLEAAITDYKGAITLKNAKIVVESEDENKIQLRVDLTGDETQK 120

Query: 121 VFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDR----------------- 180
           VFDQVLTNLARSAP MPGFRKQKGGKTSNVPKSFLLEVLGKDR                 
Sbjct: 121 VFDQVLTNLARSAPLMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMVDY 180

Query: 181 ---ENIKVKDKMVNTTQTEDELKALFRPGKEFGFNAILE 200
              ENIKVKDKMVNTTQTEDELKALFRPGKEFGFNAILE
Sbjct: 181 AKKENIKVKDKMVNTTQTEDELKALFRPGKEFGFNAILE 219

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BLAST of Carg05017 vs. NCBI nr
Match: XP_023513631.1 (uncharacterized protein LOC111778179 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 353.2 bits (905), Expect = 6.3e-94
Identity = 189/218 (86.70%), Postives = 192/218 (88.07%), Query Frame = 0


Query: 1   MASATATVANIALEFRRPVFTKVPVNGRRRNALVYMNFGGVEFVNVQDRLCTRSSVSYSP 60
           MASATATVANIALEFRRPVFTKVPVNGRRRNALV +NFGGVEF NVQDRLCTRSSVSYSP
Sbjct: 1   MASATATVANIALEFRRPVFTKVPVNGRRRNALVCLNFGGVEFENVQDRLCTRSSVSYSP 60

Query: 61  LVVGSRFLSRPMAIGSSGLEAAITDYKGAITLKNAKIVVESEDENKIQLRVDLTGDETQK 120
           LVVGSRFLSRP AI SSGLEAAITDYKGAITLKNAKIVVESEDE+ IQLRVDLTGDETQK
Sbjct: 61  LVVGSRFLSRPTAIASSGLEAAITDYKGAITLKNAKIVVESEDESMIQLRVDLTGDETQK 120

Query: 121 VFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDR----------------- 180
           VFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDR                 
Sbjct: 121 VFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADY 180

Query: 181 ---ENIKVKDKMVNTTQTEDELKALFRPGKEFGFNAIL 199
              E+IKVKDKMVNTTQTEDELK LFRPGKEFGFNAIL
Sbjct: 181 AKKEDIKVKDKMVNTTQTEDELKVLFRPGKEFGFNAIL 218

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BLAST of Carg05017 vs. NCBI nr
Match: XP_023513632.1 (uncharacterized protein LOC111778179 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 352.8 bits (904), Expect = 8.3e-94
Identity = 189/218 (86.70%), Postives = 191/218 (87.61%), Query Frame = 0


Query: 1   MASATATVANIALEFRRPVFTKVPVNGRRRNALVYMNFGGVEFVNVQDRLCTRSSVSYSP 60
           MASATATVANIALEFRRPVFTKVPVNGRRRNALV +NFGGVEF NVQDRLCTRSSVSYSP
Sbjct: 1   MASATATVANIALEFRRPVFTKVPVNGRRRNALVCLNFGGVEFENVQDRLCTRSSVSYSP 60

Query: 61  LVVGSRFLSRPMAIGSSGLEAAITDYKGAITLKNAKIVVESEDENKIQLRVDLTGDETQK 120
           LVVGSRFLSRP AI SSGLEAAITDYKGAITLKNAKIVVESEDE+ IQLRVDLTGDETQK
Sbjct: 61  LVVGSRFLSRPTAIASSGLEAAITDYKGAITLKNAKIVVESEDESMIQLRVDLTGDETQK 120

Query: 121 VFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDR----------------- 180
           VFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDR                 
Sbjct: 121 VFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADY 180

Query: 181 ---ENIKVKDKMVNTTQTEDELKALFRPGKEFGFNAIL 199
               NIKVKDKMVNTTQTEDELK LFRPGKEFGFNAIL
Sbjct: 181 AKKANIKVKDKMVNTTQTEDELKVLFRPGKEFGFNAIL 218

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BLAST of Carg05017 vs. NCBI nr
Match: XP_023004174.1 (uncharacterized protein LOC111497577 [Cucurbita maxima])

HSP 1 Score: 349.7 bits (896), Expect = 7.0e-93
Identity = 191/224 (85.27%), Postives = 193/224 (86.16%), Query Frame = 0


Query: 1   MASATA----TVANIALEFRRPVFTKVPVNGRRRNALVYMNFGGVEFVNVQDRLCTRSSV 60
           MASATA    TVANIA EFRRPVFTKVPVNGRRRNAL+ MNFGGVEF NVQDRLCTRSSV
Sbjct: 1   MASATATXXXTVANIASEFRRPVFTKVPVNGRRRNALICMNFGGVEFENVQDRLCTRSSV 60

Query: 61  SYSPLVVGSRFLSRPMAIGSSGLEAAITDYKGAITLKNAKIVVESEDENKIQLRVDLTGD 120
           SYS LVVGSRFLSRP AI SSGLEAAITDYKGAITLKNAKIVVESEDENKIQLRV+LTGD
Sbjct: 61  SYSLLVVGSRFLSRPTAIASSGLEAAITDYKGAITLKNAKIVVESEDENKIQLRVNLTGD 120

Query: 121 ETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDR------------- 180
           ETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDR             
Sbjct: 121 ETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNST 180

Query: 181 -------ENIKVKDKMVNTTQTEDELKALFRPGKEFGFNAILEL 201
                  ENIKVKDKMVNTTQTEDELK LFRPGKEFGFNAILEL
Sbjct: 181 MADYAKKENIKVKDKMVNTTQTEDELKVLFRPGKEFGFNAILEL 224

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BLAST of Carg05017 vs. NCBI nr
Match: XP_011656737.1 (PREDICTED: uncharacterized protein LOC101212225 [Cucumis sativus] >KGN46335.1 hypothetical protein Csa_6G086160 [Cucumis sativus])

HSP 1 Score: 296.2 bits (757), Expect = 9.2e-77
Identity = 166/225 (73.78%), Postives = 175/225 (77.78%), Query Frame = 0


Query: 1   MASATA----TVANIALEFRRPVFTKVPVNGRRRNALVYMNFGGVEFVNVQDRLCTRSSV 60
           M SATA     V NIA EF RP+FTKVPV G   NALV +NFGGVEF NV+D LC RSS 
Sbjct: 1   MMSATAXXXXXVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSF 60

Query: 61  SYSPLVVGSRFLSRPMAIGSSGLEAAITDYKG-AITLKNAKIVVESEDENKIQLRVDLTG 120
           SYS   +GSRFLS+P +I SSGLEAAITDYKG  ITLKNAK+VVESE+ENKIQLRVDLTG
Sbjct: 61  SYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTG 120

Query: 121 DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDR------------ 180
           DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDR            
Sbjct: 121 DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNS 180

Query: 181 --------ENIKVKDKMVNTTQTEDELKALFRPGKEFGFNAILEL 201
                   ENI VKDK V+TTQT DELK LF PGKEFGFNAILEL
Sbjct: 181 TMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILEL 225

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BLAST of Carg05017 vs. TAIR10
Match: AT2G30695.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 86.7 bits (213), Expect = 2.0e-17
Identity = 54/175 (30.86%), Postives = 93/175 (53.14%), Query Frame = 0


Query: 45  NVQDRLCTRSSVSYSPLVVGSRFLSRPMAIGSSGLEAAITDYKGAITLKNAKIVVESEDE 104
           +VQ +LCTR++          +F++  +    S +E +  D    IT       VE+E  
Sbjct: 37  SVQQKLCTRAT--------NRQFVA--VCAAPSDVETSSKDESVLIT------KVETETS 96

Query: 105 NKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRE 164
           N++++ V ++G++TQ VF+ V   +  +A P+PGFR+ KGGKT N+PK  LLE+LG  + 
Sbjct: 97  NEVKVHVQVSGEKTQTVFNHVFEKMVAAAQPIPGFRRVKGGKTPNIPKDVLLEILGYSKV 156

Query: 165 NIKVKDKMVNT-------------------TQTEDELKALFRPGKEFGFNAILEL 201
             +V  K++N+                    Q+ ++L+  F PG+ F F+A ++L
Sbjct: 157 YKQVIKKLINSAIEDYVKQEDLKVGKELTVVQSYEDLEETFEPGESFSFDATIKL 195

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BLAST of Carg05017 vs. TrEMBL
Match: tr|A0A0A0K988|A0A0A0K988_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G086160 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 6.1e-77
Identity = 166/225 (73.78%), Postives = 175/225 (77.78%), Query Frame = 0


Query: 1   MASATA----TVANIALEFRRPVFTKVPVNGRRRNALVYMNFGGVEFVNVQDRLCTRSSV 60
           M SATA     V NIA EF RP+FTKVPV G   NALV +NFGGVEF NV+D LC RSS 
Sbjct: 1   MMSATAXXXXXVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSF 60

Query: 61  SYSPLVVGSRFLSRPMAIGSSGLEAAITDYKG-AITLKNAKIVVESEDENKIQLRVDLTG 120
           SYS   +GSRFLS+P +I SSGLEAAITDYKG  ITLKNAK+VVESE+ENKIQLRVDLTG
Sbjct: 61  SYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTG 120

Query: 121 DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDR------------ 180
           DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDR            
Sbjct: 121 DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNS 180

Query: 181 --------ENIKVKDKMVNTTQTEDELKALFRPGKEFGFNAILEL 201
                   ENI VKDK V+TTQT DELK LF PGKEFGFNAILEL
Sbjct: 181 TMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILEL 225

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BLAST of Carg05017 vs. TrEMBL
Match: tr|A0A1S3CBN2|A0A1S3CBN2_CUCME (uncharacterized protein LOC103498959 OS=Cucumis melo OX=3656 GN=LOC103498959 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 4.4e-75
Identity = 165/226 (73.01%), Postives = 173/226 (76.55%), Query Frame = 0


Query: 1   MASATA----TVANIA-LEFRRPVFTKVPVNGRRRNALVYMNFGGVEFVNVQDRLCTRSS 60
           M SATA       NIA  EF RP+FTKV V G   NALV +NFGGVEF NVQD LC RSS
Sbjct: 1   MMSATAXXXXXXTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSS 60

Query: 61  VSYSPLVVGSRFLSRPMAIGSSGLEAAITDYKG-AITLKNAKIVVESEDENKIQLRVDLT 120
            SYS   +GSRFLS+P +I SSGLEAA+TDYKG AITLKNAK+VVESE+ENKIQLRVDLT
Sbjct: 61  FSYSSHRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLT 120

Query: 121 GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDR----------- 180
           GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDR           
Sbjct: 121 GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILN 180

Query: 181 ---------ENIKVKDKMVNTTQTEDELKALFRPGKEFGFNAILEL 201
                    ENI VKD  VNTTQT DELK LF PGKEFGFNAILEL
Sbjct: 181 STMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILEL 226

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BLAST of Carg05017 vs. TrEMBL
Match: tr|A0A2I4DJP7|A0A2I4DJP7_9ROSI (uncharacterized protein LOC108980819 OS=Juglans regia OX=51240 GN=LOC108980819 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.1e-49
Identity = 119/223 (53.36%), Postives = 147/223 (65.92%), Query Frame = 0


Query: 1   MASATATVANIALEFRRPVFT--KVPVNGRRRNALVYMNFGGVEFVNVQDRLCTRSSVSY 60
           MAS TAT+  +  EF+  + T  +  V   R   L   N   + F NVQ  LC R  + +
Sbjct: 1   MASITATMKTVPSEFQLQLRTSRQFSVTSCRSVILTGRNTTCINFCNVQKYLCRRLLIHH 60

Query: 61  SPLVVGSRFLSRPMAIGSSGLEAAITDYK-GAITLKNAKIVVESEDENKIQLRVDLTGDE 120
           SP   G     R ++  SSGLEA+ITD K  AITLKNA+IV+ES+DENKIQL+V L GDE
Sbjct: 61  SPHRRGPTHFPRQISASSSGLEASITDQKDNAITLKNAEIVIESQDENKIQLKVQLPGDE 120

Query: 121 TQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDR-------------- 180
           TQKVFD+VL NLA +APP+PGFR+QKGGKTS VPKSFLL+++G++R              
Sbjct: 121 TQKVFDKVLANLASTAPPVPGFRRQKGGKTSQVPKSFLLQIIGEERVTKFVIQEIVNSSL 180

Query: 181 ------ENIKVKDKMVNTTQTEDELKALFRPGKEFGFNAILEL 201
                 EN+KVKD  +NTTQT  ELK+LF PGKEFGFNAI+EL
Sbjct: 181 ADYVKKENLKVKDNKINTTQTAAELKSLFTPGKEFGFNAIVEL 223

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BLAST of Carg05017 vs. TrEMBL
Match: tr|A0A251RKJ4|A0A251RKJ4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G586900 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 8.0e-45
Identity = 111/201 (55.22%), Postives = 133/201 (66.17%), Query Frame = 0


Query: 22  KVPVNGRRRNALVYMNFGG-VEFVNVQDRLCTRSSVSYSPLVVGSRFLSRPMAIGSSGLE 81
           K PV      AL   N    VEF N Q +L T      SP   G   LSR +    SGLE
Sbjct: 16  KFPVRSYCSRALTCQNATRIVEFCNTQRKLFT------SPHKTGHARLSRLIYAAGSGLE 75

Query: 82  AAITDYKG-AITLKNAKIVVESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGF 141
           A+I D +G  ITLK AKIV+ES ++NKIQ+RVDLTGD+T+KVFD+VLTNLAR+APP+PGF
Sbjct: 76  ASIADVEGNLITLKTAKIVIESREDNKIQVRVDLTGDDTEKVFDKVLTNLARTAPPVPGF 135

Query: 142 RKQKGGKTSNVPKSFLLEVLGKDR--------------------ENIKVKDKMVNTTQTE 201
           R+QKGGKTS VPKSFLL++LGK+R                    EN+ VK+  +NTTQT 
Sbjct: 136 RRQKGGKTSKVPKSFLLDILGKERVTKFVIQEIISSTMGDYVKKENLNVKENKINTTQTA 195

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BLAST of Carg05017 vs. TrEMBL
Match: tr|A0A251RKM3|A0A251RKM3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G586900 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.3e-44
Identity = 105/181 (58.01%), Postives = 127/181 (70.17%), Query Frame = 0


Query: 41  VEFVNVQDRLCTRSSVSYSPLVVGSRFLSRPMAIGSSGLEAAITDYKG-AITLKNAKIVV 100
           VEF N Q +L T      SP   G   LSR +    SGLEA+I D +G  ITLK AKIV+
Sbjct: 37  VEFCNTQRKLFT------SPHKTGHARLSRLIYAAGSGLEASIADVEGNLITLKTAKIVI 96

Query: 101 ESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVL 160
           ES ++NKIQ+RVDLTGD+T+KVFD+VLTNLAR+APP+PGFR+QKGGKTS VPKSFLL++L
Sbjct: 97  ESREDNKIQVRVDLTGDDTEKVFDKVLTNLARTAPPVPGFRRQKGGKTSKVPKSFLLDIL 156

Query: 161 GKDR--------------------ENIKVKDKMVNTTQTEDELKALFRPGKEFGFNAILE 201
           GK+R                    EN+ VK+  +NTTQT +ELK LF+PG EFGFNAILE
Sbjct: 157 GKERVTKFVIQEIISSTMGDYVKKENLNVKENKINTTQTAEELKLLFKPGTEFGFNAILE 211

The following BLAST results are available for this feature:

BLAST of Carg05017 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960370.1	5.7e-95	87.67	uncharacterized protein LOC111461115 [Cucurbita moschata]	[more]
XP_023513631.1	6.3e-94	86.70	uncharacterized protein LOC111778179 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023513632.1	8.3e-94	86.70	uncharacterized protein LOC111778179 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023004174.1	7.0e-93	85.27	uncharacterized protein LOC111497577 [Cucurbita maxima]	[more]
XP_011656737.1	9.2e-77	73.78	PREDICTED: uncharacterized protein LOC101212225 [Cucumis sativus] >KGN46335.1 hy...	[more]

BLAST of Carg05017 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G30695.1	2.0e-17	30.86	FUNCTIONS IN: molecular_function unknown	[more]

BLAST of Carg05017 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg05017 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K988\|A0A0A0K988_CUCSA	6.1e-77	73.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G086160 PE=4 SV=1	[more]
tr\|A0A1S3CBN2\|A0A1S3CBN2_CUCME	4.4e-75	73.01	uncharacterized protein LOC103498959 OS=Cucumis melo OX=3656 GN=LOC103498959 PE=...	[more]
tr\|A0A2I4DJP7\|A0A2I4DJP7_9ROSI	1.1e-49	53.36	uncharacterized protein LOC108980819 OS=Juglans regia OX=51240 GN=LOC108980819 P...	[more]
tr\|A0A251RKJ4\|A0A251RKJ4_PRUPE	8.0e-45	55.22	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G586900 PE=4 SV=1	[more]
tr\|A0A251RKM3\|A0A251RKM3_PRUPE	2.3e-44	58.01	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G586900 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0015031	protein transport
GO:0006457	protein folding

Vocabulary: **INTERPRO**
Term	Definition
IPR036611	Trigger_fac_ribosome-bd_sf
IPR005215	Trig_fac
IPR008881	Trigger_fac_ribosome-bd_bac

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0015031	protein transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05017-RA	Carg05017-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008881	Trigger factor, ribosome-binding, bacterial	PFAM	PF05697	Trigger_N	coord: 96..211 e-value: 6.1E-9 score: 36.3
IPR005215	Trigger factor	PANTHER	PTHR30560	TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE	coord: 63..209
None	No IPR available	PANTHER	PTHR30560:SF2	SUBFAMILY NOT NAMED	coord: 63..209
IPR036611	Trigger factor ribosome-binding domain superfamily	SUPERFAMILY	SSF102735	Trigger factor ribosome-binding domain	coord: 96..209

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05017	Cla007032	Watermelon (97103) v1	carwmB0084
Carg05017	Csa6G086150	Cucumber (Chinese Long) v2	carcuB0091
Carg05017	MELO3C022427	Melon (DHL92) v3.5.1	carmeB0081
Carg05017	ClCG06G001070	Watermelon (Charleston Gray)	carwcgB0084
Carg05017	CSPI06G06670	Wild cucumber (PI 183967)	carcpiB0095
Carg05017	Cucsa.348540	Cucumber (Gy14) v1	carcgyB0098
Carg05017	CmaCh08G001870	Cucurbita maxima (Rimu)	carcmaB0112
Carg05017	CmoCh08G001930	Cucurbita moschata (Rifu)	carcmoB0119
Carg05017	Lsi09G018310	Bottle gourd (USVL1VR-Ls)	carlsiB071
Carg05017	Cp4.1LG12g09820	Cucurbita pepo (Zucchini)	carcpeB0121
Carg05017	Cp4.1LG17g10860	Cucurbita pepo (Zucchini)	carcpeB0125
Carg05017	CsGy6G006690	Cucumber (Gy14) v2	carcgybB0091
Carg05017	MELO3C022427.2	Melon (DHL92) v3.6.1	carmedB0082
Carg05017	CsaV3_6G007000	Cucumber (Chinese Long) v3	carcucB0098
Carg05017	Cla97C06G110340	Watermelon (97103) v2	carwmbB0079
Carg05017	Bhi12G002192	Wax gourd	carwgoB0091

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05017	Cucurbita maxima (Rimu)	carcmaB0110
Carg05017	Cucurbita moschata (Rifu)	carcmoB0118