Cucsa.348550 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.348550
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionTrigger factor
Locationscaffold03487 : 16558 .. 19943 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGGAAAAATGATGTCCGCCACCGCAACCGCAACCGCAACGGTGACCAACATCGCCTCAGAATTCCCGCGGCCAATATTCACCAAAGTAAGCAATTCAATGCACTTCAGCTTCTTTTCATTCCAAGTATTCTTCATAAGCCAAACCAATAACTCGAATTTTTAAGCTCCACCGTATTTTGCCGCCTTCCTATATAAGTTTAGGATGTTATCATtTTCAATTTTTTTTTTTTTTTTtttAtGCTTCAGGTTCCTGTTAAAGGCTATTGCCATAATGCTCTGGTTTGTTTGAACTTTGGTGGCGTTGAATTTGATAATGTACGAGATGGGTTGTGTAGGAGGTAAACATGTACTTTTGGTTGGTTTCCAATTTCGATATTGATTCTTAATTTCTTGTTTTTTTtCTTGGGAATTGTAATTACATATGTAGCTTAGAATTGTTCTATTGCAATGGCATTTGAATTGAACAGGAAAACTGATGGATAGAAGTGGGAACATTTTTTtCATTTACAGGTCGTCATTTTCTTATAGCTTCCATAAAATTGGTTCCAGATTTTTGTCGAAACCGACGTCCATAGCTAGTTCAGGTAAATCTGCATACTTAGATTGTTATCATATTGATTGAAGTTTTTACAGTTAAAAGACTGAATGACCAATTTTAAACTATAAGAACGAAGTCATTTCATACTTAAAGTTCATCGACTGGGTCATTGGAAATGTTAATATATAGGAATCAAGTTGTTACATGGTAAAGTTCATGGACTAATTAAATTGTTTATTTGACAGTATTTTATAACCTTTATAACCATTCTTCTTTTCCCTTCCCTTTGTTGTTTGGGAATCTCATTTATTTTTAATGTAGGTTGGAAAGAGTACAAAAATAGAGTAATTAGGAAGCAAATGACAAAAGTAAAGACAGTTTTACTAGTGAATCGCTGTTTAGTATGCACGAGGAGAGTATGATATACTATCTTCTATAATATGTATTAGAAAATTGTGTCTAGTATATCGCAAATCATGTGTATCCAACTCAGTTGTAGACCTAATAAATCATGGGAAGAAACATAGTAATGGATTTGGTAAAATTTATCCCAGTTTTGTCATTAGTGTTAAATCATTAACTATCACTTTTCAGTCAACTCTAGTTGTGCAAAAAGACCCTTTTCTGGATAGATTATGCTGTTTAGTTGATCATCTGTCTTGATTTCATAGGTTTGGAGGCAGCCATCACGGATTACAAAGGCAATCCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAGGAGGAAAACAAGATACAAGTAAGATTTGAATTTCTAGTAATCATTAATAATTTTATTTTGGAAGAGTCCCTGCCTCTCAAAGTGTGTTTGGTTATTGCAAATTTTCTTTTCTATGGAAATCCAACTTAAGTGTTACCTCTTACTTCCATGCTCAATCTCAATCAAGATTGAGTTCCTATCATCATTCCCTTTAATACTTTTTTtGATATGCATTTAGTATTAGTGACCTATAAACAATGTCTCTCATGAAATCTAATTGACAGCTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAACTTAGCCCGCTCAGCACCACCCATGCCAGGATTTCGTAAGCAAAAAGGAGGTAGTACCATGACTTTCATCTCCTTCCACTTTGAATGTTACAAACCACTAATTCATCTGCAGCACAAGTCTTTTACGTGTTCACCATCCATATAGAAAAGTATGGGAATTGAGACTGCCTTTCCTATCCTTAAGCGTTCATATGTGTAGCTGCTTTTACAGCTTATAAGTTCTTATTTCTCGTAGCAGATGACTTTATATGGTTTCTAATGCTTTCCTGTCTTCATGCACGTTGATGCTTTACCAGGGAAAACATCAAATGTGAGTTGCTGCTACTCTTTGCTTTTTCTACTTTACCAGCTTTGTGTTTGCAAGAATTTTCAAAGTTGCTGTTTATATCCAAGTCATCTAATACCTTGCCATCTTTGATAATACTCCCAAGTTTGGTATttTTTTTTTtCTTTGTAGTGATTTAGTTCTAATGTTTTATTGTTAAAGAAGTTTGAGTCATCAAGTTACAAATCGCATGAGGTGATTGAATAATGTGTTCATTAAAAATTTGTTTTTTTtATTTGGATAAATTTGATTTCACACATGATTCATTTCTTCTCAGTATCCTTATTCATTTTTTTGGGCATGTTATGTGAGATTTACATCCTAGTTGCACACAGTATTCTATTCTTCACAAGGTTTTTATTTCTCAATAATTACTTCCTTCAGGTCCCAAAAAGCTTCCTCTTAGAAGTTCTTGGTAAGGACCGAGTCACGAAGTTCATCATACAAGAAATATTGAACTCAACTATGGTAGATTATGCAAAGAAGGCAAGTTTTCTCCTTATTCCCTTATTCCCAGTGCTTATATGGTGATTGTAACTTAGAGATGTTTTTAAATTGGTTTTTCAAGATGGCTTATAGAATTCAATGATATTTGGGTAAGTAAATTCACTATTTATGAACACATCATTTCAAAAAaTTTAAAAATTGTTACAAATTAACTTGGATGATTATGTATATATAGTTAAACTATATTCTTAAATTTTAAATTTTGATTTTATGTGGTTTCTACATCATTAACTAAATCATGACCTGACATGTCTATTAGAAAAATGTCTCGTTGATTTGGCAACCATAGCTAACAAATGATGGAAAGAAGTTACCATTTGATAAAATAGGAGTGGCATGATTTATGGACTGAATTTGATATATTACTTGCAAGTAATTGATATGTTTCCTGTGCTGCCTTCTTTTGTTAACGTTGTCCATTTGCTTTTTTCCATTATCTGTCCTGCTGTGCCCAATCAACCAATGTCTATCTAGTTAGAGCATCTGATATTACCATTTAGTCAATAGTATTGATGTTAGTATCTAACATCACTAACATCAATACTAACAATAAACATTCAAACTTTACATGTGTAACCGAACCTTTTCAAAAACTAGGTAGACAAGACATGGTTCACAGTTAAGTTAGTAATTTATCAAAAAGCGGAAGTTTAGATAAACATAAGCTCAACTTTTTTCTTTtCTTTGGACTTCAACACAGGAAAACATAAATGTGAAGGACAAGAAGGTTAGCACAACACAAACAGCAGATGAACTGAAAGTGTTGTTTAATCCAGGAAAAGAGTTTGGTTTTAATGCCATACTTGAACTTGAATCTGCTTCAGATGCTGAAAGTTGAGCTTAAACATGTCCCATTTTTTCAAGTGAAGATTTTGTCCCTTTATTCTTCAATGGGCCTCCTGGTGTCAAAAGCCTTGGAAATTTTACTTGAAACTGATGAAGGC

mRNA sequence

CTTGGAAAAATGATGTCCGCCACCGCAACCGCAACCGCAACGGTGACCAACATCGCCTCAGAATTCCCGCGGCCAATATTCACCAAAGTTCCTGTTAAAGGCTATTGCCATAATGCTCTGGTTTGTTTGAACTTTGGTGGCGTTGAATTTGATAATGTACGAGATGGGTTGTGTAGGAGGTCGTCATTTTCTTATAGCTTCCATAAAATTGGTTCCAGATTTTTGTCGAAACCGACGTCCATAGCTAGTTCAGGTTTGGAGGCAGCCATCACGGATTACAAAGGCAATCCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAGGAGGAAAACAAGATACAACTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAACTTAGCCCGCTCAGCACCACCCATGCCAGGATTTCGTAAGCAAAAAGGAGGGAAAACATCAAATGTCCCAAAAAGCTTCCTCTTAGAAGTTCTTGGTAAGGACCGAGTCACGAAGTTCATCATACAAGAAATATTGAACTCAACTATGGTAGATTATGCAAAGAAGGAAAACATAAATGTGAAGGACAAGAAGGTTAGCACAACACAAACAGCAGATGAACTGAAAGTGTTGTTTAATCCAGGAAAAGAGTTTGGTTTTAATGCCATACTTGAACTTGAATCTGCTTCAGATGCTGAAAGTTGAGCTTAAACATGTCCCATTTTTTCAAGTGAAGATTTTGTCCCTTTATTCTTCAATGGGCCTCCTGGTGTCAAAAGCCTTGGAAATTTTACTTGAAACTGATGAAGGC

Coding sequence (CDS)

ATGATGTCCGCCACCGCAACCGCAACCGCAACGGTGACCAACATCGCCTCAGAATTCCCGCGGCCAATATTCACCAAAGTTCCTGTTAAAGGCTATTGCCATAATGCTCTGGTTTGTTTGAACTTTGGTGGCGTTGAATTTGATAATGTACGAGATGGGTTGTGTAGGAGGTCGTCATTTTCTTATAGCTTCCATAAAATTGGTTCCAGATTTTTGTCGAAACCGACGTCCATAGCTAGTTCAGGTTTGGAGGCAGCCATCACGGATTACAAAGGCAATCCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAGGAGGAAAACAAGATACAACTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAACTTAGCCCGCTCAGCACCACCCATGCCAGGATTTCGTAAGCAAAAAGGAGGGAAAACATCAAATGTCCCAAAAAGCTTCCTCTTAGAAGTTCTTGGTAAGGACCGAGTCACGAAGTTCATCATACAAGAAATATTGAACTCAACTATGGTAGATTATGCAAAGAAGGAAAACATAAATGTGAAGGACAAGAAGGTTAGCACAACACAAACAGCAGATGAACTGAAAGTGTTGTTTAATCCAGGAAAAGAGTTTGGTTTTAATGCCATACTTGAACTTGAATCTGCTTCAGATGCTGAAAGTTGA

Protein sequence

MMSATATATATVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSFSYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNSTMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES*
Homology
[Close]
BLAST of Cucsa.348550 vs. Swiss-Prot
Match: TIG_SYNP2 (Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=tig PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.4e-08
Identity = 34/125 (27.20%), Postives = 66/125 (52.80%), Query Frame = 1 

Query: 101 KVVVESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFL 160
           KV+ E    +++ L +++  D TQK +D  +  LAR+   +PGFRK K      VPK  L
Sbjct: 2   KVIQEKLPASQVGLEIEVPADVTQKAYDDTVRKLARTV-NLPGFRKGK------VPKQIL 61

Query: 161 LEVLGKDRVTKFIIQEILNSTMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFN 220
           ++ LG +R+   +++++++ ++     +ENI           + D+L   + PG+   F 
Sbjct: 62  IQRLGPNRIKASVLEDLIDDSLKAAIAQENIEALG-NFQLKSSFDDLISAYKPGEASSFK 118

Query: 221 AILEL 226
           A +++
Sbjct: 122 AAVDV 118

[Close]
BLAST of Cucsa.348550 vs. TrEMBL
Match: A0A0A0K988_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G086160 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 5.3e-126
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1 

Query: 1   MMSATATATATVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSF 60
           MMSATATATATVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSF
Sbjct: 1   MMSATATATATVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSF 60

Query: 61  SYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTG 120
           SYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTG
Sbjct: 61  SYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTG 120

Query: 121 DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNS 180
           DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNS
Sbjct: 121 DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNS 180

Query: 181 TMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 234
           TMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES
Sbjct: 181 TMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 233

[Close]
BLAST of Cucsa.348550 vs. TrEMBL
Match: M5XGM1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011327mg PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 3.5e-61
Identity = 120/172 (69.77%), Postives = 147/172 (85.47%), Query Frame = 1 

Query: 57  RSSFSYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRV 116
           R  F  S HK G   LS+    A SGLEA+I D +GN ITLK AK+V+ES E+NKIQ+RV
Sbjct: 38  RLLFFCSPHKTGHARLSRLIYAAGSGLEASIADVEGNLITLKTAKIVIESREDNKIQVRV 97

Query: 117 DLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQE 176
           DLTGD+T+KVFD+VLTNLAR+APP+PGFR+QKGGKTS VPKSFLL++LGK+RVTKF+IQE
Sbjct: 98  DLTGDDTEKVFDKVLTNLARTAPPVPGFRRQKGGKTSKVPKSFLLDILGKERVTKFVIQE 157

Query: 177 ILNSTMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESA 229
           I++STM DY KKEN+NVK+ K++TTQTA+ELK+LF PG EFGFNAILELE++
Sbjct: 158 IISSTMGDYVKKENLNVKENKINTTQTAEELKLLFKPGTEFGFNAILELENS 209

[Close]
BLAST of Cucsa.348550 vs. TrEMBL
Match: F6HAX0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0094g00420 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 6.2e-58
Identity = 118/203 (58.13%), Postives = 154/203 (75.86%), Query Frame = 1 

Query: 33  CHNALV-CLNFGGVEFDNVRDGLCRRSSFSYSFHKIGSRFLSKPTSIASSGLEAAITDYK 92
           CH+ ++ C N   + F + +  LC R  +  + H+   RFLSKP S   SG +A+I D K
Sbjct: 668 CHDHVISCQNTTSISFPHRQQDLCGRLLYPCNLHQGSLRFLSKPISAVGSGSKASIIDPK 727

Query: 93  GNPITLKNAKVVVESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGK 152
            N IT+KNAK+VVES+E+++IQLRVD+ G +TQ+VFD VLTNLARSAPP+PGFR+QKGG 
Sbjct: 728 DNDITIKNAKIVVESQEDDEIQLRVDVAGVDTQRVFDHVLTNLARSAPPIPGFRRQKGGN 787

Query: 153 TSNVPKSFLLEVLGKDRVTKFIIQEILNSTMVDYAKKENINVKDKKVSTTQTADELKVLF 212
           +  VPKSFLL++LG++RVTKF+IQEI+ +T+ DY  KEN+NVKDKK++TT  A+ELK LF
Sbjct: 788 SLYVPKSFLLQILGEERVTKFVIQEIITATVSDYVMKENLNVKDKKITTTPAAEELKSLF 847

Query: 213 NPGKEFGFNAILELE-SASDAES 234
            PG EF FNA LELE S S+A S
Sbjct: 848 TPGNEFRFNATLELEKSESEATS 870

[Close]
BLAST of Cucsa.348550 vs. TrEMBL
Match: I3S2E8_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 3.2e-54
Identity = 106/161 (65.84%), Postives = 136/161 (84.47%), Query Frame = 1 

Query: 70  RFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGDETQKVFDQ 129
           R L+ P S  +SGLEA+ITD   N   L NA++V+ESE+E+KIQLRVDLTGD+T++VFD+
Sbjct: 71  RHLNTPISAVNSGLEASITDSDENSAILTNAQIVLESEDESKIQLRVDLTGDQTERVFDR 130

Query: 130 VLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNSTMVDYAKKE 189
            L +L R+APP+PGFR QKGGK+S +PKSFL+++LG++RVTKF+IQEILNSTM +YAKKE
Sbjct: 131 TLISLGRTAPPVPGFRMQKGGKSSKIPKSFLVQILGEERVTKFVIQEILNSTMANYAKKE 190

Query: 190 NINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASD 231
           N++VK KKVSTTQTA+ELK  F PGKEFGFN I+E E++ D
Sbjct: 191 NLDVKGKKVSTTQTAEELKKSFTPGKEFGFNVIIEPENSED 231

[Close]
BLAST of Cucsa.348550 vs. TrEMBL
Match: A0A0D2SDS9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G351700 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 7.1e-54
Identity = 104/162 (64.20%), Postives = 139/162 (85.80%), Query Frame = 1 

Query: 70  RFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGDETQKVFDQ 129
           R+  KP S  +SGLEA+I+D     I LK+AK+VVES++ENKIQLRVD+TG ETQKVF++
Sbjct: 48  RYRRKPISALASGLEASISDADDKLIALKDAKIVVESKDENKIQLRVDVTGIETQKVFNK 107

Query: 130 VLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNSTMVDYAKKE 189
           VLT+LAR APP+PGFR++KGGKT+ VP+ FLL++LG++RVTKF++QEI+ ST+ DY K+E
Sbjct: 108 VLTDLARQAPPIPGFRREKGGKTTKVPREFLLQILGEERVTKFVVQEIVTSTVADYVKEE 167

Query: 190 NINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDA 232
           N+NVKDKKVST+Q+A+ELKV F PGK+F FNA+LELE + ++
Sbjct: 168 NLNVKDKKVSTSQSAEELKVSFTPGKDFWFNAVLELEESENS 209

[Close]
BLAST of Cucsa.348550 vs. TAIR10
Match: AT2G30695.1 (AT2G30695.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 115.5 bits (288), Expect = 4.3e-26
Identity = 52/126 (41.27%), Postives = 90/126 (71.43%), Query Frame = 1 

Query: 104 VESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEV 163
           VE+E  N++++ V ++G++TQ VF+ V   +  +A P+PGFR+ KGGKT N+PK  LLE+
Sbjct: 75  VETETSNEVKVHVQVSGEKTQTVFNHVFEKMVAAAQPIPGFRRVKGGKTPNIPKDVLLEI 134

Query: 164 LGKDRVTKFIIQEILNSTMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAIL 223
           LG  +V K +I++++NS + DY K+E++ V  K+++  Q+ ++L+  F PG+ F F+A +
Sbjct: 135 LGYSKVYKQVIKKLINSAIEDYVKQEDLKV-GKELTVVQSYEDLEETFEPGESFSFDATI 194

Query: 224 ELESAS 230
           +L+ AS
Sbjct: 195 KLQEAS 199

[Close]
BLAST of Cucsa.348550 vs. NCBI nr
Match: gi|778711475|ref|XP_011656737.1| (PREDICTED: uncharacterized protein LOC101212225 [Cucumis sativus])

HSP 1 Score: 458.4 bits (1178), Expect = 7.6e-126
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1 

Query: 1   MMSATATATATVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSF 60
           MMSATATATATVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSF
Sbjct: 1   MMSATATATATVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSF 60

Query: 61  SYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTG 120
           SYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTG
Sbjct: 61  SYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTG 120

Query: 121 DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNS 180
           DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNS
Sbjct: 121 DETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNS 180

Query: 181 TMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 234
           TMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES
Sbjct: 181 TMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 233

[Close]
BLAST of Cucsa.348550 vs. NCBI nr
Match: gi|659120113|ref|XP_008460020.1| (PREDICTED: uncharacterized protein LOC103498959 [Cucumis melo])

HSP 1 Score: 436.0 bits (1120), Expect = 4.1e-119
Identity = 223/234 (95.30%), Postives = 228/234 (97.44%), Query Frame = 1 

Query: 1   MMSATATATATVTNIAS-EFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSS 60
           MMSATATATATVTNIAS EFPRPIFTKV VKGYCHNALVCLNFGGVEFDNV+DGLCRRSS
Sbjct: 1   MMSATATATATVTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSS 60

Query: 61  FSYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLT 120
           FSYS H+IGSRFLSKPTSIASSGLEAA+TDYKGN ITLKNAKVVVESEEENKIQLRVDLT
Sbjct: 61  FSYSSHRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLT 120

Query: 121 GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILN 180
           GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKF+IQEILN
Sbjct: 121 GDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILN 180

Query: 181 STMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 234
           STM DYAKKENINVKD KV+TTQTADELKVLFNPGKEFGFNAILELESASDAES
Sbjct: 181 STMADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAES 234

[Close]
BLAST of Cucsa.348550 vs. NCBI nr
Match: gi|645223426|ref|XP_008218625.1| (PREDICTED: uncharacterized protein LOC103318938 isoform X2 [Prunus mume])

HSP 1 Score: 257.3 bits (656), Expect = 2.6e-65
Identity = 135/218 (61.93%), Postives = 167/218 (76.61%), Query Frame = 1 

Query: 13  TNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLC--RRSSFSYSFHKIGSR 72
           T + S F      K PV+ YC  AL C N   +       G C  +R  F+ S HK G  
Sbjct: 3   TVVPSHFQSLGLPKFPVRSYCSRALTCQNATRIV------GFCNTQRKLFT-SPHKTGHA 62

Query: 73  FLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGDETQKVFDQV 132
            LS+    A SGLEA+I D +GN ITLK+AK+VVES+E+NKIQ+RVDLTGD+T+KVFD+V
Sbjct: 63  RLSRLICAAGSGLEASIADVEGNLITLKSAKIVVESQEDNKIQVRVDLTGDDTEKVFDKV 122

Query: 133 LTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNSTMVDYAKKEN 192
           LTNLAR+APP+PGFR+QKGGKTS VPKSFLL++LGK+RVTKF+IQEI++STM DY KKEN
Sbjct: 123 LTNLARTAPPVPGFRRQKGGKTSKVPKSFLLDILGKERVTKFVIQEIISSTMGDYVKKEN 182

Query: 193 INVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESA 229
           +NVK+ K++TTQTA+ELK+LF PG EFGFNAILELE +
Sbjct: 183 LNVKENKINTTQTAEELKLLFKPGTEFGFNAILELEDS 213

[Close]
BLAST of Cucsa.348550 vs. NCBI nr
Match: gi|645223424|ref|XP_008218623.1| (PREDICTED: uncharacterized protein LOC103318938 isoform X1 [Prunus mume])

HSP 1 Score: 254.2 bits (648), Expect = 2.2e-64
Identity = 131/203 (64.53%), Postives = 162/203 (79.80%), Query Frame = 1 

Query: 28  PVKGYCHNALVCLNFGGVEFDNVRDGLC--RRSSFSYSFHKIGSRFLSKPTSIASSGLEA 87
           PV+ YC  AL C N   +       G C  +R  F+ S HK G   LS+    A SGLEA
Sbjct: 19  PVRSYCSRALTCQNATRIV------GFCNTQRKLFT-SPHKTGHARLSRLICAAGSGLEA 78

Query: 88  AITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFR 147
           +I D +GN ITLK+AK+VVES+E+NKIQ+RVDLTGD+T+KVFD+VLTNLAR+APP+PGFR
Sbjct: 79  SIADVEGNLITLKSAKIVVESQEDNKIQVRVDLTGDDTEKVFDKVLTNLARTAPPVPGFR 138

Query: 148 KQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNSTMVDYAKKENINVKDKKVSTTQTAD 207
           +QKGGKTS VPKSFLL++LGK+RVTKF+IQEI++STM DY KKEN+NVK+ K++TTQTA+
Sbjct: 139 RQKGGKTSKVPKSFLLDILGKERVTKFVIQEIISSTMGDYVKKENLNVKENKINTTQTAE 198

Query: 208 ELKVLFNPGKEFGFNAILELESA 229
           ELK+LF PG EFGFNAILELE +
Sbjct: 199 ELKLLFKPGTEFGFNAILELEDS 214

[Close]
BLAST of Cucsa.348550 vs. NCBI nr
Match: gi|596187577|ref|XP_007223422.1| (hypothetical protein PRUPE_ppa011327mg [Prunus persica])

HSP 1 Score: 243.0 bits (619), Expect = 5.0e-61
Identity = 120/172 (69.77%), Postives = 147/172 (85.47%), Query Frame = 1 

Query: 57  RSSFSYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRV 116
           R  F  S HK G   LS+    A SGLEA+I D +GN ITLK AK+V+ES E+NKIQ+RV
Sbjct: 38  RLLFFCSPHKTGHARLSRLIYAAGSGLEASIADVEGNLITLKTAKIVIESREDNKIQVRV 97

Query: 117 DLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQE 176
           DLTGD+T+KVFD+VLTNLAR+APP+PGFR+QKGGKTS VPKSFLL++LGK+RVTKF+IQE
Sbjct: 98  DLTGDDTEKVFDKVLTNLARTAPPVPGFRRQKGGKTSKVPKSFLLDILGKERVTKFVIQE 157

Query: 177 ILNSTMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESA 229
           I++STM DY KKEN+NVK+ K++TTQTA+ELK+LF PG EFGFNAILELE++
Sbjct: 158 IISSTMGDYVKKENLNVKENKINTTQTAEELKLLFKPGTEFGFNAILELENS 209

The following BLAST results are available for this feature:
BLAST of Cucsa.348550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TIG_SYNP28.4e-0827.20Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=tig... [more]
BLAST of Cucsa.348550 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K988_CUCSA5.3e-126100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G086160 PE=4 SV=1[more]
M5XGM1_PRUPE3.5e-6169.77Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011327mg PE=4 SV=1[more]
F6HAX0_VITVI6.2e-5858.13Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0094g00420 PE=4 SV=... [more]
I3S2E8_LOTJA3.2e-5465.84Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
A0A0D2SDS9_GOSRA7.1e-5464.20Uncharacterized protein OS=Gossypium raimondii GN=B456_009G351700 PE=4 SV=1[more]
BLAST of Cucsa.348550 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G30695.14.3e-2641.27 FUNCTIONS IN: molecular_function unknown[more]
BLAST of Cucsa.348550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778711475|ref|XP_011656737.1|7.6e-126100.00PREDICTED: uncharacterized protein LOC101212225 [Cucumis sativus][more]
gi|659120113|ref|XP_008460020.1|4.1e-11995.30PREDICTED: uncharacterized protein LOC103498959 [Cucumis melo][more]
gi|645223426|ref|XP_008218625.1|2.6e-6561.93PREDICTED: uncharacterized protein LOC103318938 isoform X2 [Prunus mume][more]
gi|645223424|ref|XP_008218623.1|2.2e-6464.53PREDICTED: uncharacterized protein LOC103318938 isoform X1 [Prunus mume][more]
gi|596187577|ref|XP_007223422.1|5.0e-6169.77hypothetical protein PRUPE_ppa011327mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008881Trigger_fac_ribosome-bd_bac
IPR008881Trigger_fac_ribosome-bd_bac
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0015031protein transport
GO:0006457protein folding
GO:0015031protein transport
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0015031 protein transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.348550.1Cucsa.348550.1mRNA
Cucsa.348550.2Cucsa.348550.2mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008881Trigger factor, ribosome-binding, bacterialGENE3DG3DSA:3.30.70.1050coord: 67..190
score: 3.2
IPR008881Trigger factor, ribosome-binding, bacterialPFAMPF05697Trigger_Ncoord: 67..191
score: 6.4
IPR008881Trigger factor, ribosome-binding, bacterialunknownSSF102735Trigger factor ribosome-binding domaincoord: 67..190
score: 5.23
NoneNo IPR availablePANTHERPTHR30560TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASEcoord: 36..199
score: 4.4
NoneNo IPR availablePANTHERPTHR30560:SF2SUBFAMILY NOT NAMEDcoord: 36..199
score: 4.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.348550Csa6G086150Cucumber (Chinese Long) v2cgycuB490
Cucsa.348550Lsi09G018310Bottle gourd (USVL1VR-Ls)cgylsiB562
Cucsa.348550Cp4.1LG17g10860Cucurbita pepo (Zucchini)cgycpeB0912
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.348550Wax gourdcgywgoB698
Cucsa.348550Cucurbita maxima (Rimu)cgycmaB0956
Cucsa.348550Cucurbita moschata (Rifu)cgycmoB0956
Cucsa.348550Wild cucumber (PI 183967)cgycpiB517
Cucsa.348550Melon (DHL92) v3.5.1cgymeB564
Cucsa.348550Watermelon (Charleston Gray)cgywcgB595
Cucsa.348550Watermelon (97103) v1cgywmB626
Cucsa.348550Melon (DHL92) v3.6.1cgymedB565
Cucsa.348550Silver-seed gourdcarcgyB0098
Cucsa.348550Cucumber (Chinese Long) v3cgycucB532
Cucsa.348550Watermelon (97103) v2cgywmbB596