Cucsa.348550.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTGGAAAAATGATGTCCGCCACCGCAACCGCAACCGCAACGGTGACCAACATCGCCTCAGAATTCCCGCGGCCAATATTCACCAAAGTAAGCAATTCAATGCACTTCAGCTTCTTTTCATTCCAAGTATTCTTCATAAGCCAAACCAATAACTCGAATTTTTAAGCTCCACCGTATTTTGCCGCCTTCCTATATAAGTTTAGGATGTTATCATtTTCAATTTTTTTTTTTTTTTTtttAtGCTTCAGGTTCCTGTTAAAGGCTATTGCCATAATGCTCTGGTTTGTTTGAACTTTGGTGGCGTTGAATTTGATAATGTACGAGATGGGTTGTGTAGGAGGTAAACATGTACTTTTGGTTGGTTTCCAATTTCGATATTGATTCTTAATTTCTTGTTTTTTTtCTTGGGAATTGTAATTACATATGTAGCTTAGAATTGTTCTATTGCAATGGCATTTGAATTGAACAGGAAAACTGATGGATAGAAGTGGGAACATTTTTTtCATTTACAGGTCGTCATTTTCTTATAGCTTCCATAAAATTGGTTCCAGATTTTTGTCGAAACCGACGTCCATAGCTAGTTCAGGTAAATCTGCATACTTAGATTGTTATCATATTGATTGAAGTTTTTACAGTTAAAAGACTGAATGACCAATTTTAAACTATAAGAACGAAGTCATTTCATACTTAAAGTTCATCGACTGGGTCATTGGAAATGTTAATATATAGGAATCAAGTTGTTACATGGTAAAGTTCATGGACTAATTAAATTGTTTATTTGACAGTATTTTATAACCTTTATAACCATTCTTCTTTTCCCTTCCCTTTGTTGTTTGGGAATCTCATTTATTTTTAATGTAGGTTGGAAAGAGTACAAAAATAGAGTAATTAGGAAGCAAATGACAAAAGTAAAGACAGTTTTACTAGTGAATCGCTGTTTAGTATGCACGAGGAGAGTATGATATACTATCTTCTATAATATGTATTAGAAAATTGTGTCTAGTATATCGCAAATCATGTGTATCCAACTCAGTTGTAGACCTAATAAATCATGGGAAGAAACATAGTAATGGATTTGGTAAAATTTATCCCAGTTTTGTCATTAGTGTTAAATCATTAACTATCACTTTTCAGTCAACTCTAGTTGTGCAAAAAGACCCTTTTCTGGATAGATTATGCTGTTTAGTTGATCATCTGTCTTGATTTCATAGGTTTGGAGGCAGCCATCACGGATTACAAAGGCAATCCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAGGAGGAAAACAAGATACAAGTAAGATTTGAATTTCTAGTAATCATTAATAATTTTATTTTGGAAGAGTCCCTGCCTCTCAAAGTGTGTTTGGTTATTGCAAATTTTCTTTTCTATGGAAATCCAACTTAAGTGTTACCTCTTACTTCCATGCTCAATCTCAATCAAGATTGAGTTCCTATCATCATTCCCTTTAATACTTTTTTtGATATGCATTTAGTATTAGTGACCTATAAACAATGTCTCTCATGAAATCTAATTGACAGCTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAACTTAGCCCGCTCAGCACCACCCATGCCAGGATTTCGTAAGCAAAAAGGAGGTAGTACCATGACTTTCATCTCCTTCCACTTTGAATGTTACAAACCACTAATTCATCTGCAGCACAAGTCTTTTACGTGTTCACCATCCATATAGAAAAGTATGGGAATTGAGACTGCCTTTCCTATCCTTAAGCGTTCATATGTGTAGCTGCTTTTACAGCTTATAAGTTCTTATTTCTCGTAGCAGATGACTTTATATGGTTTCTAATGCTTTCCTGTCTTCATGCACGTTGATGCTTTACCAGGGAAAACATCAAATGTGAGTTGCTGCTACTCTTTGCTTTTTCTACTTTACCAGCTTTGTGTTTGCAAGAATTTTCAAAGTTGCTGTTTATATCCAAGTCATCTAATACCTTGCCATCTTTGATAATACTCCCAAGTTTGGTATttTTTTTTTtCTTTGTAGTGATTTAGTTCTAATGTTTTATTGTTAAAGAAGTTTGAGTCATCAAGTTACAAATCGCATGAGGTGATTGAATAATGTGTTCATTAAAAATTTGTTTTTTTtATTTGGATAAATTTGATTTCACACATGATTCATTTCTTCTCAGTATCCTTATTCATTTTTTTGGGCATGTTATGTGAGATTTACATCCTAGTTGCACACAGTATTCTATTCTTCACAAGGTTTTTATTTCTCAATAATTACTTCCTTCAGGTCCCAAAAAGCTTCCTCTTAGAAGTTCTTGGTAAGGACCGAGTCACGAAGTTCATCATACAAGAAATATTGAACTCAACTATGGTAGATTATGCAAAGAAGGCAAGTTTTCTCCTTATTCCCTTATTCCCAGTGCTTATATGGTGATTGTAACTTAGAGATGTTTTTAAATTGGTTTTTCAAGATGGCTTATAGAATTCAATGATATTTGGGTAAGTAAATTCACTATTTATGAACACATCATTTCAAAAAaTTTAAAAATTGTTACAAATTAACTTGGATGATTATGTATATATAGTTAAACTATATTCTTAAATTTTAAATTTTGATTTTATGTGGTTTCTACATCATTAACTAAATCATGACCTGACATGTCTATTAGAAAAATGTCTCGTTGATTTGGCAACCATAGCTAACAAATGATGGAAAGAAGTTACCATTTGATAAAATAGGAGTGGCATGATTTATGGACTGAATTTGATATATTACTTGCAAGTAATTGATATGTTTCCTGTGCTGCCTTCTTTTGTTAACGTTGTCCATTTGCTTTTTTCCATTATCTGTCCTGCTGTGCCCAATCAACCAATGTCTATCTAGTTAGAGCATCTGATATTACCATTTAGTCAATAGTATTGATGTTAGTATCTAACATCACTAACATCAATACTAACAATAAACATTCAAACTTTACATGTGTAACCGAACCTTTTCAAAAACTAGGTAGACAAGACATGGTTCACAGTTAAGTTAGTAATTTATCAAAAAGCGGAAGTTTAGATAAACATAAGCTCAACTTTTTTCTTTtCTTTGGACTTCAACACAGGAAAACATAAATGTGAAGGACAAGAAGGTTAGCACAACACAAACAGCAGATGAACTGAAAGTGTTGTTTAATCCAGGAAAAGAGTTTGGTTTTAATGCCATACTTGAACTTGAATCTGCTTCAGATGCTGAAAGTTGAGCTTAAACATGTCCCATTTTTTCAAGTGAAGATTTTGTCCCTTTATTCTTCAATGGGCCTCCTGGTGTCAAAAGCCTTGGAAATTTTACTTGAAACTGATGAAGGC CTTGGAAAAATGATGTCCGCCACCGCAACCGCAACCGCAACGGTGACCAACATCGCCTCAGAATTCCCGCGGCCAATATTCACCAAAGTTCCTGTTAAAGGCTATTGCCATAATGCTCTGGTTTGTTTGAACTTTGGTGGCGTTGAATTTGATAATGTACGAGATGGGTTGTGTAGGAGGTCGTCATTTTCTTATAGCTTCCATAAAATTGGTTCCAGATTTTTGTCGAAACCGACGTCCATAGCTAGTTCAGGTTTGGAGGCAGCCATCACGGATTACAAAGGCAATCCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAGGAGGAAAACAAGATACAACTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAACTTAGCCCGCTCAGCACCACCCATGCCAGGATTTCGTAAGCAAAAAGGAGGGAAAACATCAAATGTCCCAAAAAGCTTCCTCTTAGAAGTTCTTGGTAAGGACCGAGTCACGAAGTTCATCATACAAGAAATATTGAACTCAACTATGGTAGATTATGCAAAGAAGGAAAACATAAATGTGAAGGACAAGAAGGTTAGCACAACACAAACAGCAGATGAACTGAAAGTGTTGTTTAATCCAGGAAAAGAGTTTGGTTTTAATGCCATACTTGAACTTGAATCTGCTTCAGATGCTGAAAGTTGAGCTTAAACATGTCCCATTTTTTCAAGTGAAGATTTTGTCCCTTTATTCTTCAATGGGCCTCCTGGTGTCAAAAGCCTTGGAAATTTTACTTGAAACTGATGAAGGC ATGATGTCCGCCACCGCAACCGCAACCGCAACGGTGACCAACATCGCCTCAGAATTCCCGCGGCCAATATTCACCAAAGTTCCTGTTAAAGGCTATTGCCATAATGCTCTGGTTTGTTTGAACTTTGGTGGCGTTGAATTTGATAATGTACGAGATGGGTTGTGTAGGAGGTCGTCATTTTCTTATAGCTTCCATAAAATTGGTTCCAGATTTTTGTCGAAACCGACGTCCATAGCTAGTTCAGGTTTGGAGGCAGCCATCACGGATTACAAAGGCAATCCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAGGAGGAAAACAAGATACAACTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAACTTAGCCCGCTCAGCACCACCCATGCCAGGATTTCGTAAGCAAAAAGGAGGGAAAACATCAAATGTCCCAAAAAGCTTCCTCTTAGAAGTTCTTGGTAAGGACCGAGTCACGAAGTTCATCATACAAGAAATATTGAACTCAACTATGGTAGATTATGCAAAGAAGGAAAACATAAATGTGAAGGACAAGAAGGTTAGCACAACACAAACAGCAGATGAACTGAAAGTGTTGTTTAATCCAGGAAAAGAGTTTGGTTTTAATGCCATACTTGAACTTGAATCTGCTTCAGATGCTGAAAGTTGA MMSATATATATVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSFSYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNSTMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES*
BLAST of Cucsa.348550.1 vs. Swiss-Prot
Match: TIG_SYNP2 (Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=tig PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 8.4e-08 Identity = 34/125 (27.20%), Postives = 66/125 (52.80%), Query Frame = 1
BLAST of Cucsa.348550.1 vs. TrEMBL
Match: A0A0A0K988_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G086160 PE=4 SV=1) HSP 1 Score: 458.4 bits (1178), Expect = 5.3e-126 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1
BLAST of Cucsa.348550.1 vs. TrEMBL
Match: M5XGM1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011327mg PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 3.5e-61 Identity = 120/172 (69.77%), Postives = 147/172 (85.47%), Query Frame = 1
BLAST of Cucsa.348550.1 vs. TrEMBL
Match: F6HAX0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0094g00420 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 6.2e-58 Identity = 118/203 (58.13%), Postives = 154/203 (75.86%), Query Frame = 1
BLAST of Cucsa.348550.1 vs. TrEMBL
Match: I3S2E8_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 3.2e-54 Identity = 106/161 (65.84%), Postives = 136/161 (84.47%), Query Frame = 1
BLAST of Cucsa.348550.1 vs. TrEMBL
Match: A0A0D2SDS9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G351700 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 7.1e-54 Identity = 104/162 (64.20%), Postives = 139/162 (85.80%), Query Frame = 1
BLAST of Cucsa.348550.1 vs. TAIR10
Match: AT2G30695.1 (AT2G30695.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 115.5 bits (288), Expect = 4.3e-26 Identity = 52/126 (41.27%), Postives = 90/126 (71.43%), Query Frame = 1
BLAST of Cucsa.348550.1 vs. NCBI nr
Match: gi|778711475|ref|XP_011656737.1| (PREDICTED: uncharacterized protein LOC101212225 [Cucumis sativus]) HSP 1 Score: 458.4 bits (1178), Expect = 7.6e-126 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1
BLAST of Cucsa.348550.1 vs. NCBI nr
Match: gi|659120113|ref|XP_008460020.1| (PREDICTED: uncharacterized protein LOC103498959 [Cucumis melo]) HSP 1 Score: 436.0 bits (1120), Expect = 4.1e-119 Identity = 223/234 (95.30%), Postives = 228/234 (97.44%), Query Frame = 1
BLAST of Cucsa.348550.1 vs. NCBI nr
Match: gi|645223426|ref|XP_008218625.1| (PREDICTED: uncharacterized protein LOC103318938 isoform X2 [Prunus mume]) HSP 1 Score: 257.3 bits (656), Expect = 2.6e-65 Identity = 135/218 (61.93%), Postives = 167/218 (76.61%), Query Frame = 1
BLAST of Cucsa.348550.1 vs. NCBI nr
Match: gi|645223424|ref|XP_008218623.1| (PREDICTED: uncharacterized protein LOC103318938 isoform X1 [Prunus mume]) HSP 1 Score: 254.2 bits (648), Expect = 2.2e-64 Identity = 131/203 (64.53%), Postives = 162/203 (79.80%), Query Frame = 1
BLAST of Cucsa.348550.1 vs. NCBI nr
Match: gi|596187577|ref|XP_007223422.1| (hypothetical protein PRUPE_ppa011327mg [Prunus persica]) HSP 1 Score: 243.0 bits (619), Expect = 5.0e-61 Identity = 120/172 (69.77%), Postives = 147/172 (85.47%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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