Cp4.1LG14g03530 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG14g03530
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUbiquitin domain-containing protein
LocationCp4.1LG14 : 2215426 .. 2221810 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTAACACATAAGGAAGGAATACTTGGTATCACCTACCATTTGTGGAGCATCTTGAAGAAAGTTTATATTCTCTCCGGCCTAATCTTTCCCCTTCTATCTGCCTGTGAATTCAAGCTTCTGTTCTAGCGAGACGCAATGGGCTGTGCTGGATCGTCGCAGACCAACGGGGACGGTGAGGTTCACTTCGCTTCTCTGGTTCTTTTTTTTTTCTAGATTCTCGGCGAAATTTTGTTCTATGTTCGTCTGTTGACTTGGCTACTAGGAATATTAGATGATAATCAATGCAAGTTGATTTGCTGTGGTAGGAAGAGCGGGAGTGTTGGTCTAGTAGTATTGAATTTCTCGGTAATGAATTGGATTGCTCTTGATTTGATTTATTCTGTCATAGCGTTGCTTGATGGTGTTCGTATGTTTGTCCTGTGAGTTGTGACTGTGACGGGAGATTCTTGAACTTCACTTGCGATTATCAGATTATGTAGTGGTGCATTAATTAGGATGAGCAGGTCTCGAATTTGGATTATTGCACTAGTTCATTGAAATAGTTTTGTTATTCATTCATTTTGGGAGTGACGGGTTTTTGAAGGTTGCTTAGAGTTATTGCTCACTGGTTCATTTGAGATTTCATGCTGGTGATTCAAATTCCACTACAGATTTATGCTTTCAGATTAATGAAGTTATCAAGATTTGTAGTCGGAATCTTGGCATATTTGTTGCTTAACTAGTTTCGCATTCAGAGAGTTCTATTAGATTAATTGTGAAGCTGTGATGTTAGCATTCCAGGACTAAAATTTCAGCAACTAACACTTAAATGGACAGTATCTTATATTTCTGCTTTATACTTGTAACGCCCCAGATCGCTGGTAGATATTGTCCTCTTTGGGCTTTCCCTTTCGAGCTTCCCCTCAACGCTTTAAAACGCGTCTACCAGGGGAAGGTTTCCACACCCTTATAAATGGTGGTTTGTTCTCCTCCCCAACCAATGTGGGACATCACAATCCACGCCCTTCGGGGCCCAACGTCCTCGCTGGCACTCTTTCCTTCCTCCAATCGATGTGGGACCGCCCCTAAATCCACCCCCTTTGGGGCCAGCATACTTACTGGCACACCGCCTCGTGTCTACCCCCTTTGGGGAACAGCGAGAAGGTTGGCACATCGTCCGGTGTCTGGCTCTGATACCAACCATTTGTAACGCCCCAGATCCACCGCTAGTAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGACTTCCCCTCAAGGCTTTAAAACGCGTCTGCTAGGGGAAGGTTTCCACACCCTTATAAATGGTGGTTTGTTCTCCTCCCCAACCAACGTGGGACATCACAATACTACAATCAAAAGAAATAATAGCGTTTTTAAAGGGATTGAGAGGGAGCTTTTTGTAGTTTGGTCCCTTATGAGATTTAATGTCAAAGTCTTAGGACGAACTTTTGTAATTCTCCTTGTGTTGTTTATAGTTCTGAATGTCTAAGGATTTCATTTAAACTTTTCAAGACTACCATGCTGCTAGCCTTGAATCTGGGTTTTGGTTTATACTTGATCCAAGCCATTGAGATATGACTGAAATTGTTTCTTTATGTAGGTTCCATAAAGAAAATAGGCAAGCCAAAATCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTCGTGCAACTGCGGGAGGAGTTCTGGGACACTGCACCTCACTATGGTGGCCGAAAAGGTAGGCCTGTCTCTAAATATTTTTTGCCAGTGTGTTTATTAGAGGTTAGCTTATCAAAAAAGTTACTAAGAGTTTATTTAGTTAGGAATAGACCTTACATTATTGTATCATACTACGGAGTAGCTCATGATTTTTGGTTTTAGAATCTACATTTCCATCTCGAGCAAAACGTAAAACTAGGGATAGATGACCATTCAATCCATGCAAAAGGTGGCTGCTGTAGTTGCNGAGGTGTTGGATGATGAAAGTCCCACATCAGCTAATTTAGGGAATGATCATGTGTTTATAAACAAAGAATACTCTCCATTGGTGTGAGGCCTTTTGGGGAAGACCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCATTTAACATGGTATCAGAGCCATGCTCTAAACTTAATCGTGCCAATAGATTGGTAAATCCTCAAATAGTCAAACAAAGGACTCCAAAAAGAAAAAGGAGTCGAGCCTCCTCGAACCTACGAAGGTAGTAAAAAATGACTAAGACTCCAAAGGAGTCGAGTCTCGATTAAGGGGAGGCGTGCTTTGTTCGAGGGGAGGGGAGGTGTTGGATGATGAAAATCCTACATTTCTAAGGTACNTCTAAACTTAGTCGTGCCAATAGATTGGTAAATCCTCAAATAGTCGAACAAAGGACTCAAAAAAGAAAAAGGAGTCAAGCCTCCTCGAACCTACGAAGGTAGTAAAAAATGACTAAGACTCCAAAGGAGTCGAGTCTCGATTAAGGGGAGGCGTGCTTTGTTCGAGGGGAGGGGAGGTGTTGGATGATGAAAATCCTACATTTCTAAGGTACGAAGGCAGTAAAAAATGACTAATACTCCAAAGGAGTCGAGCCTATAATAAGGGGAGGCGTGCTTTGTTCGAGGGGAGGTGTTGGGTGATGGANAAAATGACTAAGACTCCTTGGCGTGCTTTGTTCGAGGGGAGGGAAGGTGTTGGATGATGAAAATCCCACATTGGCTAAGGTACGAAGGCAGTAAAAAATGACTAATACTCCAAAGGAGTCGAGCCTCGAATAAGGGGAGGCGTGCTTTGTTCGAGGGGAGGTGTTGGGTGATGGAAATCCCACGTCGGCTAATTTAGGGAATGATCATGGGTTTATAAACAAAGAATACTCTCTCCATTGGTGTGAGGCCTAGGGAATGATCATGGGTTTATAAACAAAGAATACTCTCTCCATTGGTGTGAGGCCTAGGGAATGATCATGGGTTTATAAACAAAGAATACTCTCTCCATTGGTGTGAGGCCTAGGGAATGATCATGGGTTTATAAACAAAGAATACTCTCTCCATTGGTGTGAGGCCTTTTGGGAAGCTCGANCGAAGCAAAGCCATGAGAGCTTGCTTAAAGTGACAATATCATCTCTCCATTGGTGTGAGGCATTTTGGGGAAGCTCGAAGCAAAGCCATGAGAGCTTGCTTAAAGTGACAATATCATACCATTGTGGAGAGTCGGGTTCATTTAACATGGTATCAGAGCCATGCCCTAAACTTAGTCGTGCCAATAGATTGGCAAATCCTCGCGTGTTCGTCTAACACAGGGGACCCAATAAAGGTTGGGATGAATTATCCCTTGGAAACAACTATGATATCTTTCACAGCTATAAGAACAGTTAATCAATTTCCAATTTCTAGGATCCTTCGACTGTTTTTCCTGTTTCCTAATAAACTAAGTTCTTCGGTTTGGAGAGACGGAGGTTTCCTATTTTTATGCCGATTCCAGATTGCCATTGCCAATATCGAAGAATCTCGTTCGATGTGTAGGCTTCTCCAATTGTCTCATTTTGCTTTNTCCTGTTTCCTAATAAACTAAGTTCTTCGGTTTGGAGAGACGAGGTTTCCTATTTTTATGCCGATTCCAGATTGGCATTGCCAACATCGAAGAATCTCGTTCGATGTGTAGGCTTCTCCAATTGTTTCATTTTGCTTTCTAGGAAGAAATGTGATATAGGGAGTTTTTGGTATAATTGATTCATGTTCTTTTATGACATGGTTATTTATTAATTATGCTATGAATGTTGGCTCTTGGATGTAGACATATTTCAAATCAATTTAAATTGCGAGTAAAGATTTATTTTGAGGACTCTTTGTGAAAGCTAAGGCGACACCAAAATGATGAACTTCTTTTTCTCAGGCTTGGAGCCATTATGTTATATTCTTACCTAGGATTATGGAACGTGATTAACTAGAAGTCTTATGTCTCGACTTCACTTTTATACGTGTTTATTCCCCTTTTTCGTAGTCTTCTTGTTAATCTATTTACTTTCGTGGGGTTTCTTCTCCCTTTTATCTCTTTTTTAATAGTCTTTAGTATTTTTGTAAAGCTTAATGGAAACCATTGGGAATCGCCACAATTTNATTTATTAATTATGCTATGAATGTTGGCTCTTGGATGTAGACGTATTTCAAATCAATTTAAATTGCGAGTAAAGATTTATTTTGAGGACTCTTTGTGAGAGCTAAGACGACACCAAAATGATATATTCTTACCTAGGATTGTGGAACGTGATTAACTAGAAGTCTTATGTCTCGACTTCACTTTTATACGTGTTTATTCCCCTTTTTCGTAGTCTTCTTGTTAATCTATTTACTTTCGTGGGGTTTCTTCTCCCTTTTATCTCTTTTTTAATAGTCTTTAGTATTTTTGTAAAGCTTAATGGAAACCATTGGGAATCGCCACAATTTTTTGAAGTGACCTGCCTTGTTTGAATTTCTCTTCGCCCACAATTCATTTTGCAGTCCCTTATTGATCTGTGGTTAAAGACATTAGTTCTTATTTTTCTTCAACTTTCTGCTTTCACTTCCCCCAAATAANGTACACCATTTGTTCGACATTTTAGGCACTTTTGACTACACCTTCAAGGCCCACAATTCTTTGTTCGACATTTGAGGATTTTATCGACGTGGCTAAGTTTAGGGCATGACTTTGATATTATGTTAGGAATCACGATTCTCCACAATGGTATGATATTGTCCATTTTGAGTATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCTAAAAGGCCTCATACTAATGGAGATAGTATTCCCCCCTTATAAACTCATGATCTTCCACTAAATTAACCAATATGGGACTCACTCCCAACAATCCTCCCATCGAACAAAGTATACTATAAGCCTCCCCTGAGGCTTATGGAGCTCTCGAATAGCCTCCCTTAATCGAGGCTCGACTCCTTCCTCTGGAGCCCCTCGAACAAAGTACACCCTTTGTTCGACACTTTAGTCACTCTTGACTACAATCCTCCCCTCGAACAAAGTATACTATAAGCCTCCCCTGAGGCTTATGGAGCTCTCGAATAGCCTCCCTTAATCGAGGCTCGACTCCTTCCTCTGGAGCCCCTCGAATAAAGTACACCATTTGTTGGACACTTTAGTCACTTTTGACTACACTTTCGAGACTCACAATTCTTTGTTCGATATTTGAGGATTTTATTGACATGGCTAACTTTAGGGCATGGCTCTGATACTATGTTAGGAATCACGAATCTCCACAATGGTATGATATTGTCCACTTTGAGCCTAAACTCTCATGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCATACGAATAGAGATAGTATTCCCCAGTTATAAACCCATCATCTTCCACTAAATTAACGGTCTCACTCCCAATAATCCTCAACTGTATCTATACGAAGGTTTCTAATACACGGCACAAATTTCTGTTAATTTTCATTTTTCACTTTCATTAATTGACTTTAGTCGATAAGGATCTTTGGATCTAGCATTTCAAGTGCGGATTGTTTCAAAATTTGAATATTGAACTGATGTAGCATTTTGTACCAAAAATCAAATGAGAAAAAGATGATTGACCATATACGAGCCTTGCAGTAAAGAGAACACTAGTATAATTGAAAGGGCATCTTTAGGCCATGACATACCCCCCTCCAAGTTAACATCGACTTCAACCTTCTTATACATTCCTTTTTCCTTTACTAACTGTTTTTTGTGGTTACCAGAGATTTGGGACGCACTACGAGCAGCTGCCGAAGCCGAGCTTTCCCTTGCGCAAGCCATCATAGACAGCGCCGGAGTAATCATCCAAAATGCAGATTTGACAATCTGTTACGACGAGAGAGGTCGATACCATTGCTTCATTTAAGAAATTATGATACGTTATGTTAGTTTAGTCATCGGTATCGTTTTACCATTGCTCAATCTTACTGCAGGCGCAAAATATGAACTACCCAACTATGTTTTGAGTGAGCCAACCAATTTGATTCGTGACAGTTCATAAAGAGGTAACCATAACTTCATTTCTGCTCTAGCTGAAATCACACAGGTCTGAATAATGCTTGCTTTTAAAAGGTTTCATTTTGGCCCTTAAAACAAACCTACATTATTCATTCCTCTAACTTCTTCTGTAAGTTGCTTTACTCTAAATGGACAAATTGCAACATCGCTTTTCACATTTTTTTGTACAAAACAAACCGGTTTAGCAGTGTCATAAGTTACTTGATTACTTGTATAAATTAAGATTCAATGTAGAATGACTGAAAGTTTGAAAGCTCTGTGATTGATTGTCGTATCTAAGAAGAAGAAAAAAAGAGCAATATTGTGGA

mRNA sequence

ATGTACGCAATGGGCTGTGCTGGATCGTCGCAGACCAACGGGGACGGTTCCATAAAGAAAATAGGCAAGCCAAAATCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTCGTGCAACTGCGGGAGGAGTTCTGGGACACTGCACCTCACTATGGTGGCCGAAAAGAGATTTGGGACGCACTACGAGCAGCTGCCGAAGCCGAGCTTTCCCTTGCGCAAGCCATCATAGACAGCGCCGGAGTAATCATCCAAAATGCAGATTTGACAATCTGTTACGACGAGAGAGGCGCAAAATATGAACTACCCAACTATGTTTTGAGTGAGCCAACCAATTTGATTCGTGACAGTTCATAAAGAGGTAACCATAACTTCATTTCTGCTCTAGCTGAAATCACACAGGTCTGAATAATGCTTGCTTTTAAAAGGTTTCATTTTGGCCCTTAAAACAAACCTACATTATTCATTCCTCTAACTTCTTCTGTAAGTTGCTTTACTCTAAATGGACAAATTGCAACATCGCTTTTCACATTTTTTTGTACAAAACAAACCGGTTTAGCAGTGTCATAAGTTACTTGATTACTTGTATAAATTAAGATTCAATGTAGAATGACTGAAAGTTTGAAAGCTCTGTGATTGATTGTCGTATCTAAGAAGAAGAAAAAAAGAGCAATATTGTGGA

Coding sequence (CDS)

ATGTACGCAATGGGCTGTGCTGGATCGTCGCAGACCAACGGGGACGGTTCCATAAAGAAAATAGGCAAGCCAAAATCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTCGTGCAACTGCGGGAGGAGTTCTGGGACACTGCACCTCACTATGGTGGCCGAAAAGAGATTTGGGACGCACTACGAGCAGCTGCCGAAGCCGAGCTTTCCCTTGCGCAAGCCATCATAGACAGCGCCGGAGTAATCATCCAAAATGCAGATTTGACAATCTGTTACGACGAGAGAGGCGCAAAATATGAACTACCCAACTATGTTTTGAGTGAGCCAACCAATTTGATTCGTGACAGTTCATAA

Protein sequence

MYAMGCAGSSQTNGDGSIKKIGKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS
Homology
[Close]
BLAST of Cp4.1LG14g03530 vs. Swiss-Prot
Match: UBTD2_DANRE (Ubiquitin domain-containing protein 2 OS=Danio rerio GN=ubtd2 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-23
Identity = 61/124 (49.19%), Postives = 77/124 (62.10%), Query Frame = 1 

Query: 7   AGSSQTNGDGSIKKIG--------KPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEI 66
           +GS   N DG+   +G        KPK WK   P+T  QL   R+EFWDTAP + GRKEI
Sbjct: 12  SGSLNENSDGTGVALGRNQPLKREKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEI 71

Query: 67  WDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLI 119
           WDAL+AAA+A    +  LAQAIID A + + +  LT CYDE G +Y+LP Y LS P N+I
Sbjct: 72  WDALKAAAQAFESNDHELAQAIIDGASITLPHGALTECYDELGNRYQLPVYCLSPPVNMI 131

[Close]
BLAST of Cp4.1LG14g03530 vs. Swiss-Prot
Match: UBTD1_XENLA (Ubiquitin domain-containing protein 1 OS=Xenopus laevis GN=ubtd1 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 6.1e-23
Identity = 60/124 (48.39%), Postives = 76/124 (61.29%), Query Frame = 1 

Query: 7   AGSSQTNGDGSIKKIG--------KPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEI 66
           +GS   N DG+   +G        KPK WK   P+T  QL   R+EFWDTAP + GRKEI
Sbjct: 12  SGSLNENSDGTGVALGRNQPLKKDKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEI 71

Query: 67  WDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLI 119
           WDAL+AAA A    +  LAQAIID A + + +  LT CYDE G +Y+LP Y L+ P N+I
Sbjct: 72  WDALKAAAHAFESNDHELAQAIIDGASITLPHGALTECYDELGNRYQLPVYCLAPPINMI 131

[Close]
BLAST of Cp4.1LG14g03530 vs. Swiss-Prot
Match: UBTD2_MOUSE (Ubiquitin domain-containing protein 2 OS=Mus musculus GN=Ubtd2 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 6.1e-23
Identity = 60/124 (48.39%), Postives = 76/124 (61.29%), Query Frame = 1 

Query: 7   AGSSQTNGDGSIKKIG--------KPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEI 66
           +GS   N DG+   +G        KPK WK   P+T  QL   R+EFWDTAP + GRKEI
Sbjct: 12  SGSLNENSDGTGVALGRNQPLKKEKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEI 71

Query: 67  WDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLI 119
           WDAL+AAA A    +  LAQAIID A + + +  LT CYDE G +Y+LP Y L+ P N+I
Sbjct: 72  WDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMI 131

[Close]
BLAST of Cp4.1LG14g03530 vs. Swiss-Prot
Match: UBTD1_DANRE (Ubiquitin domain-containing protein 1 OS=Danio rerio GN=ubtd1 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-22
Identity = 63/132 (47.73%), Postives = 79/132 (59.85%), Query Frame = 1 

Query: 5   GCAGS--SQTNGDGS------------IKKIGKPKSWKHPQPITRSQLVQLREEFWDTAP 64
           GC G   ++T G GS            +KK  KPK WK   P+T  QL   R+EFWDTAP
Sbjct: 3   GCVGRERAETRGRGSRTQRKRGGRNEPLKK-DKPK-WKSDYPMTEGQLRSKRDEFWDTAP 62

Query: 65  HYGGRKEIWDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYV 119
            + GRKEIWDAL+AAA A    +  LAQAI+D A + + +  LT CYDE G +Y+LP Y 
Sbjct: 63  AFEGRKEIWDALKAAAVALECSDHELAQAIVDGANITLPHGSLTECYDELGNRYQLPVYC 122

[Close]
BLAST of Cp4.1LG14g03530 vs. Swiss-Prot
Match: UBTD2_BOVIN (Ubiquitin domain-containing protein 2 OS=Bos taurus GN=UBTD2 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.8e-22
Identity = 59/124 (47.58%), Postives = 76/124 (61.29%), Query Frame = 1 

Query: 7   AGSSQTNGDGSIKKIG--------KPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEI 66
           +GS   N +G+   +G        KPK WK   P+T  QL   R+EFWDTAP + GRKEI
Sbjct: 12  SGSLNENSEGTGVALGRNQPLKKEKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEI 71

Query: 67  WDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLI 119
           WDAL+AAA A    +  LAQAIID A + + +  LT CYDE G +Y+LP Y L+ P N+I
Sbjct: 72  WDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMI 131

[Close]
BLAST of Cp4.1LG14g03530 vs. TrEMBL
Match: A0A0A0KVJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G083480 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.2e-56
Identity = 108/115 (93.91%), Postives = 111/115 (96.52%), Query Frame = 1 

Query: 4   MGCAGSSQTNGDGSIKKIGKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALR 63
           MGCAGSSQT  DGSIKKI KPKSWKHPQPITRSQL QLR+EFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALR 60

Query: 64  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 119
           AAAEAELSLAQAI+DSAGVI+QNADLTICYDERGAKYELPNYVLSEPTNLIRDSS
Sbjct: 61  AAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 115

[Close]
BLAST of Cp4.1LG14g03530 vs. TrEMBL
Match: M5X7X0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013589mg PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.0e-53
Identity = 99/114 (86.84%), Postives = 110/114 (96.49%), Query Frame = 1 

Query: 4   MGCAGSSQTNGDGSIKKIGKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALR 63
           MGCAGSSQT GDG++KK+ KPK WKHPQP+T+SQL+QLREEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQTKGDGALKKVRKPKPWKHPQPLTKSQLLQLREEFWDTAPHYGGRKEIWDALR 60

Query: 64  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLIRDS 118
           AAAEA+LSLAQAI+DSAGVI+Q+ADLTICYDERGAKYELP YVLSEPTNLIR+S
Sbjct: 61  AAAEADLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLIRES 114

[Close]
BLAST of Cp4.1LG14g03530 vs. TrEMBL
Match: A0A061FG33_THECC (Ubiquitin domain-containing protein OS=Theobroma cacao GN=TCM_032011 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.6e-52
Identity = 98/114 (85.96%), Postives = 108/114 (94.74%), Query Frame = 1 

Query: 4   MGCAGSSQTNGDGSIKKIGKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALR 63
           MGCAGS+   GDG++KKI KPK WKHPQPIT+SQLVQ+REEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSTPAKGDGNVKKIRKPKPWKHPQPITKSQLVQMREEFWDTAPHYGGRKEIWDALR 60

Query: 64  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLIRDS 118
           AAAEA+L+LAQAI+DSAGVI+QNADLTICYDERGAKYELP YVLSEPTNLI+DS
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQNADLTICYDERGAKYELPKYVLSEPTNLIQDS 114

[Close]
BLAST of Cp4.1LG14g03530 vs. TrEMBL
Match: W9RUD2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002639 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 5.7e-52
Identity = 98/114 (85.96%), Postives = 108/114 (94.74%), Query Frame = 1 

Query: 4   MGCAGSSQTNGDGSIKKIGKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALR 63
           MGCAGSSQ  GDG++KKI KPK WKHPQPIT++QL+QLREEFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSSQAKGDGTVKKIRKPKPWKHPQPITKTQLMQLREEFWDTAPHYGGTKEIWDALR 60

Query: 64  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLIRDS 118
           AAAEA+LSLAQAI+DSAGVI+Q+ADLTICYDERGAKYELP YVLSEPTNLI+DS
Sbjct: 61  AAAEADLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLIQDS 114

[Close]
BLAST of Cp4.1LG14g03530 vs. TrEMBL
Match: B9I1R9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s10900g PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 5.7e-52
Identity = 97/114 (85.09%), Postives = 108/114 (94.74%), Query Frame = 1 

Query: 4   MGCAGSSQTNGDGSIKKIGKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALR 63
           MGCAGSSQ   DG++KKI KPK WKHPQPIT+SQL+Q+R+EFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQAKSDGNVKKIRKPKPWKHPQPITKSQLMQMRDEFWDTAPHYGGRKEIWDALR 60

Query: 64  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLIRDS 118
           AAA+AELSLAQAI+DSAGVI+QNADLTICYDERGAKYELP YVLSEPTNLIR++
Sbjct: 61  AAADAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPKYVLSEPTNLIRET 114

[Close]
BLAST of Cp4.1LG14g03530 vs. TAIR10
Match: AT1G53400.1 (AT1G53400.1 Ubiquitin domain-containing protein)

HSP 1 Score: 199.5 bits (506), Expect = 1.1e-51
Identity = 90/110 (81.82%), Postives = 103/110 (93.64%), Query Frame = 1 

Query: 4   MGCAGSSQTNGDGSIKKIGKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALR 63
           MGCAGS+Q+  DGS+KKI KPK WKH QPIT+++L++LREEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSTQSQADGSVKKIRKPKPWKHTQPITKAELMKLREEFWDTAPHYGGRKEIWDALR 60

Query: 64  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNL 114
           AAAEA++SLAQAI+DSAGVI+QN DLT+CYDERGAKYELP YVLSEPTNL
Sbjct: 61  AAAEADISLAQAIVDSAGVIVQNTDLTVCYDERGAKYELPKYVLSEPTNL 110

[Close]
BLAST of Cp4.1LG14g03530 vs. TAIR10
Match: AT5G45740.1 (AT5G45740.1 Ubiquitin domain-containing protein)

HSP 1 Score: 178.3 bits (451), Expect = 2.7e-45
Identity = 82/115 (71.30%), Postives = 97/115 (84.35%), Query Frame = 1 

Query: 4   MGCAGSSQTNGDGSIK--KIGKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDA 63
           MGC GSSQ   +G  K  KI KPK W H +PITR+QL  +REEFWDT+PHYGG++EIW+A
Sbjct: 1   MGCIGSSQARNEGGAKRKKIMKPKPWAHTEPITRAQLTNMREEFWDTSPHYGGQREIWEA 60

Query: 64  LRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLIRD 117
           LRAAAEA+L LAQ I+DSAGVI+QN DLT+C+DERGA+YELP YVLSEPTNLIR+
Sbjct: 61  LRAAAEADLKLAQTIVDSAGVIVQNRDLTLCWDERGARYELPRYVLSEPTNLIRE 115

[Close]
BLAST of Cp4.1LG14g03530 vs. TAIR10
Match: AT1G16960.1 (AT1G16960.1 Ubiquitin domain-containing protein)

HSP 1 Score: 171.4 bits (433), Expect = 3.3e-43
Identity = 80/112 (71.43%), Postives = 98/112 (87.50%), Query Frame = 1 

Query: 4   MGCAGSSQTNGDGSIKKIGKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALR 63
           MGC+ SS+T  +G  +KI +PK+WKHPQPI+R +L Q+REEFWDTAPHYGG+KEIWDALR
Sbjct: 1   MGCS-SSRTIAEGKKEKIRRPKTWKHPQPISRDELTQMREEFWDTAPHYGGKKEIWDALR 60

Query: 64  AAAEA-ELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLI 115
           AAAE  +LSLAQ I++SAGVI+QN DLTICYDE+G+KYELP YVL +P+NLI
Sbjct: 61  AAAEEDDLSLAQTILESAGVIVQNTDLTICYDEKGSKYELPKYVLRDPSNLI 111

[Close]
BLAST of Cp4.1LG14g03530 vs. NCBI nr
Match: gi|449438909|ref|XP_004137230.1| (PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis sativus])

HSP 1 Score: 226.1 bits (575), Expect = 3.2e-56
Identity = 108/115 (93.91%), Postives = 111/115 (96.52%), Query Frame = 1 

Query: 4   MGCAGSSQTNGDGSIKKIGKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALR 63
           MGCAGSSQT  DGSIKKI KPKSWKHPQPITRSQL QLR+EFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALR 60

Query: 64  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 119
           AAAEAELSLAQAI+DSAGVI+QNADLTICYDERGAKYELPNYVLSEPTNLIRDSS
Sbjct: 61  AAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 115

[Close]
BLAST of Cp4.1LG14g03530 vs. NCBI nr
Match: gi|659101695|ref|XP_008451743.1| (PREDICTED: ubiquitin domain-containing protein 2-like [Cucumis melo])

HSP 1 Score: 220.3 bits (560), Expect = 1.8e-54
Identity = 105/114 (92.11%), Postives = 108/114 (94.74%), Query Frame = 1 

Query: 4   MGCAGSSQTNGDGSIKKIGKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALR 63
           MGCAGSS T  DGSIKKI KPKSWKHPQPITRSQL QLR+EFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALR 60

Query: 64  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLIRDS 118
           AAAEAELSLAQ I+DSAGVI+QNADLTICYDERGAKYELPNYVLSEPTNLIRDS
Sbjct: 61  AAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDS 114

[Close]
BLAST of Cp4.1LG14g03530 vs. NCBI nr
Match: gi|595904566|ref|XP_007213986.1| (hypothetical protein PRUPE_ppa013589mg [Prunus persica])

HSP 1 Score: 215.3 bits (547), Expect = 5.7e-53
Identity = 99/114 (86.84%), Postives = 110/114 (96.49%), Query Frame = 1 

Query: 4   MGCAGSSQTNGDGSIKKIGKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALR 63
           MGCAGSSQT GDG++KK+ KPK WKHPQP+T+SQL+QLREEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQTKGDGALKKVRKPKPWKHPQPLTKSQLLQLREEFWDTAPHYGGRKEIWDALR 60

Query: 64  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLIRDS 118
           AAAEA+LSLAQAI+DSAGVI+Q+ADLTICYDERGAKYELP YVLSEPTNLIR+S
Sbjct: 61  AAAEADLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLIRES 114

[Close]
BLAST of Cp4.1LG14g03530 vs. NCBI nr
Match: gi|694411304|ref|XP_009334023.1| (PREDICTED: ubiquitin domain-containing protein 1-like [Pyrus x bretschneideri])

HSP 1 Score: 213.8 bits (543), Expect = 1.7e-52
Identity = 97/114 (85.09%), Postives = 110/114 (96.49%), Query Frame = 1 

Query: 4   MGCAGSSQTNGDGSIKKIGKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALR 63
           MGCAGSSQT GDG++KK+ KPK WKHPQP+T+SQL+QLREEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQTKGDGTLKKVRKPKPWKHPQPLTKSQLLQLREEFWDTAPHYGGRKEIWDALR 60

Query: 64  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLIRDS 118
           AA+EA++SLAQAI+DSAGVI+QNADLTICYDERGAKYELP YVLSEPTNLI++S
Sbjct: 61  AASEADISLAQAIVDSAGVIVQNADLTICYDERGAKYELPKYVLSEPTNLIQES 114

[Close]
BLAST of Cp4.1LG14g03530 vs. NCBI nr
Match: gi|590610771|ref|XP_007021914.1| (Ubiquitin domain-containing protein [Theobroma cacao])

HSP 1 Score: 212.6 bits (540), Expect = 3.7e-52
Identity = 98/114 (85.96%), Postives = 108/114 (94.74%), Query Frame = 1 

Query: 4   MGCAGSSQTNGDGSIKKIGKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALR 63
           MGCAGS+   GDG++KKI KPK WKHPQPIT+SQLVQ+REEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSTPAKGDGNVKKIRKPKPWKHPQPITKSQLVQMREEFWDTAPHYGGRKEIWDALR 60

Query: 64  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLIRDS 118
           AAAEA+L+LAQAI+DSAGVI+QNADLTICYDERGAKYELP YVLSEPTNLI+DS
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQNADLTICYDERGAKYELPKYVLSEPTNLIQDS 114

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g03530 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UBTD2_DANRE1.2e-2349.19Ubiquitin domain-containing protein 2 OS=Danio rerio GN=ubtd2 PE=2 SV=1[more]
UBTD1_XENLA6.1e-2348.39Ubiquitin domain-containing protein 1 OS=Xenopus laevis GN=ubtd1 PE=2 SV=1[more]
UBTD2_MOUSE6.1e-2348.39Ubiquitin domain-containing protein 2 OS=Mus musculus GN=Ubtd2 PE=2 SV=1[more]
UBTD1_DANRE1.4e-2247.73Ubiquitin domain-containing protein 1 OS=Danio rerio GN=ubtd1 PE=2 SV=1[more]
UBTD2_BOVIN1.8e-2247.58Ubiquitin domain-containing protein 2 OS=Bos taurus GN=UBTD2 PE=2 SV=1[more]
BLAST of Cp4.1LG14g03530 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVJ9_CUCSA2.2e-5693.91Uncharacterized protein OS=Cucumis sativus GN=Csa_4G083480 PE=4 SV=1[more]
M5X7X0_PRUPE4.0e-5386.84Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013589mg PE=4 SV=1[more]
A0A061FG33_THECC2.6e-5285.96Ubiquitin domain-containing protein OS=Theobroma cacao GN=TCM_032011 PE=4 SV=1[more]
W9RUD2_9ROSA5.7e-5285.96Uncharacterized protein OS=Morus notabilis GN=L484_002639 PE=4 SV=1[more]
B9I1R9_POPTR5.7e-5285.09Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s10900g PE=4 SV=1[more]
BLAST of Cp4.1LG14g03530 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G53400.11.1e-5181.82 Ubiquitin domain-containing protein[more]
AT5G45740.12.7e-4571.30 Ubiquitin domain-containing protein[more]
AT1G16960.13.3e-4371.43 Ubiquitin domain-containing protein[more]
BLAST of Cp4.1LG14g03530 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449438909|ref|XP_004137230.1|3.2e-5693.91PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis sativus][more]
gi|659101695|ref|XP_008451743.1|1.8e-5492.11PREDICTED: ubiquitin domain-containing protein 2-like [Cucumis melo][more]
gi|595904566|ref|XP_007213986.1|5.7e-5386.84hypothetical protein PRUPE_ppa013589mg [Prunus persica][more]
gi|694411304|ref|XP_009334023.1|1.7e-5285.09PREDICTED: ubiquitin domain-containing protein 1-like [Pyrus x bretschneideri][more]
gi|590610771|ref|XP_007021914.1|3.7e-5285.96Ubiquitin domain-containing protein [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0043130ubiquitin binding
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0043130 ubiquitin binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g03530.1Cp4.1LG14g03530.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13609UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATEDcoord: 1..118
score: 1.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG14g03530Cucsa.273680Cucumber (Gy14) v1cgycpeB0714
Cp4.1LG14g03530CmaCh16G004320Cucurbita maxima (Rimu)cmacpeB344
Cp4.1LG14g03530CmaCh04G006650Cucurbita maxima (Rimu)cmacpeB716
Cp4.1LG14g03530CmoCh16G004650Cucurbita moschata (Rifu)cmocpeB307
Cp4.1LG14g03530Csa4G083480Cucumber (Chinese Long) v2cpecuB221
Cp4.1LG14g03530MELO3C016122Melon (DHL92) v3.5.1cpemeB196
Cp4.1LG14g03530ClCG07G010180Watermelon (Charleston Gray)cpewcgB209
Cp4.1LG14g03530CSPI04G07920Wild cucumber (PI 183967)cpecpiB223
Cp4.1LG14g03530Lsi07G002840Bottle gourd (USVL1VR-Ls)cpelsiB188
Cp4.1LG14g03530MELO3C016122.2Melon (DHL92) v3.6.1cpemedB239
Cp4.1LG14g03530CsaV3_4G033020Cucumber (Chinese Long) v3cpecucB0270
Cp4.1LG14g03530CsaV3_4G008140Cucumber (Chinese Long) v3cpecucB0266
Cp4.1LG14g03530Bhi09G002880Wax gourdcpewgoB0309
Cp4.1LG14g03530Bhi01G002489Wax gourdcpewgoB0294
Cp4.1LG14g03530CsGy4G021220Cucumber (Gy14) v2cgybcpeB490
Cp4.1LG14g03530CsGy4G007790Cucumber (Gy14) v2cgybcpeB487
Cp4.1LG14g03530Carg13089Silver-seed gourdcarcpeB0060
Cp4.1LG14g03530Carg11362Silver-seed gourdcarcpeB0926
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG14g03530Cp4.1LG01g00630Cucurbita pepo (Zucchini)cpecpeB235
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG14g03530Cucurbita pepo (Zucchini)cpecpeB234
Cp4.1LG14g03530Cucurbita pepo (Zucchini)cpecpeB236
Cp4.1LG14g03530Cucurbita maxima (Rimu)cmacpeB715
Cp4.1LG14g03530Cucurbita maxima (Rimu)cmacpeB717
Cp4.1LG14g03530Cucurbita moschata (Rifu)cmocpeB668
Cp4.1LG14g03530Cucurbita moschata (Rifu)cmocpeB669
Cp4.1LG14g03530Cucurbita moschata (Rifu)cmocpeB670
Cp4.1LG14g03530Watermelon (97103) v1cpewmB219
Cp4.1LG14g03530Silver-seed gourdcarcpeB0057
Cp4.1LG14g03530Silver-seed gourdcarcpeB0059