CmaCh16G004320 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh16G004320
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUbiquitin domain-containing protein
LocationCma_Chr16 : 2151472 .. 2157962 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCTAATCTTTCCTTCTATCTGCCTGTGAATTGAAGCTTCTGTTCTAGCGAGACGCAATGGGCTGTGCTGGATCGTCGCAGACCAACGGGGAAGGTGAGGTTCACTTCGCTTCTGTGTTTTTTTTTTTTCTAAATTCTCGGCGAAATTTTGTTCTATGTTCGTCTGTTGACTTGGCTACTAGGAATATTAGAAGATAATCAATGCAAGTTGATTTGCTGTGGTAGGGAGAGCGGGAGTGTTGGTCTAGTAGTATTGAATTTCTCGGTAATGAATTGGATTGCTCTTGATTTTATTTATTCTGTCATAGCGTTGCCTGATGGTGTTCGTAAGTTTGTCCTGTGAGTTGTGACTGTGACAGGAGATTCTTGAACTTCACTTGCGATTATCAGATTATGTAGTGGTGCATTAATTAGGATGAGCAGCTCTCAAATTTAGATAATTGCACTAGTTCATGGAAATAGTTGTATTATTCATTCATTTTGGGAGTGACGGGTTTTTGAAGGTTGCTTAGAGTTATTGCTCACTGGTTCATTTGACATTTCATGCTGGTGATTCAAATTCCACTACAGATTTATGCTTTCAGATTAATGAAGTTATCAAGACTTGTAGTCGGAATCTTGGCATATTTGTTGCTTAACTAGTTTCGCATTCAAAGAGTTCTATTAGATTAATTGTGAAGCTGTGATGGTAGCATTCCAGGACTAAAATTTCAGCAACTAACAGTTAAATGGACAGTATCTTATATTTCTGCTTTATACTGCAATCAAAAGAAATAATAGCGTTTTTAGAGGGAGTGAGAGGGAGCTTATTGATGTTTGGTCCCTTGTGAGATTTAATGTCTCTCTTTTGGCAGCAGTTACAAGTTTTTTTTTTTTTCTTTTTGTAATAATTTTTAGAGGGATTGAGAGAGAGTCTTTTGATGATTGGTCCATTGTGAGATTTAATGTCTCTCTTTGGGTGGCGGTGACGAGTTTCTTTCGTAATAGTTTTTAGAGGGATCGAGAGGAAGTCTTTTGATGTCTGGTCCATTAAAAGATTTATGTCTCTCTTTGGGCGGCAGTGACGAGTTCCTTTTGTAATTACTCTCTTTATGGGCTTGTTTTGTGGAGAGGTGATTTTCATTTGACTCTTTTCTACATGCAAAATGTCTAAGGTAATAGTTGTACGTGAAAATTCCTCCCTTTCCCTCTTTATTCTTGTAACAAATATTACAAATGACAGGAATTGTTGATCTTCTTGTTTGTTTTTAAAGAGGAAGAAAACACTTGAGGATACTGAAATGGAAAAGAAGCACTTCAAAAGCGTAAAGAAAAGGATAGAGAAAATTGCAAAATTTTAGGACGAACTTTTGTAATTCTCCTTGTGTTGTTTATAGTTCTGAATGTCTAAGGATTTCATTTAAACTTTTCAAGACTACCATGCTGTTAGCCTTGAATCTGGTTTTGTTGGTTTATACTTGATTCAAGCCATTGAGATATCACTGAAATTGTTTCTTTATGTAGGTTCCATAAAGAAAATACGCAAGCCAAAATCTTGGAAGCATCCTCAGCCAATTACAAGGTTTCAGCTTGTGCAACTGCGGGAGGAGTTCTGGGACACTGCACCTCACTATGGTGGCCGAAAAGGTAGGCCTGTCTCTAAATATTTTTTGCCAGTGTTAAAATCTGCATGGATTATTAGAGGTTAGCTGGTCAAAAAAGTTACTAAGAGTTTATTTAGTTAGGAATAGACCTTACATTGTTGTATCATGCTACGGAGTAGCTCATGACTTTTGGTTTCAGAATCTAATTTTCCGTCTCGAGCAAAATGTAAAACTAGGGATAGATGACCATTCAATCCATGGAAAAGGTGACTACTGTAGTTGCAGGGGACCCAATAAAGGTTAGGATGAGTTATCCCTTGGAAACAACTATGGTATATTTCACAGCTATAAGAACAGTTAATCAATTTCCAGTTTCTAGGATCCTTAGATTGTTTTTCCTGTTTCCTAATGAACTAAGTTCTTCGGTTTGGAGAGACGAGGTTTCCTATTTTTATGCTGATTCCAGATTGCCATTGCCAACATCAAAGAATCTCATTTGATGTGTAGGCTTTTCCAATTGTTTCATTTTGGTTTGTGCTCAAATCAAAGGGGATGCTTTCTGGAAGAAATGTGATATAGGGAGTTTTTGGTATAATTGATTCATGTTTCTTTATTACATGGTTATTTATTAATTATGCCATGAATGTTGGCTCTTGGATGTAGACATCTTTCAAATCAATTTAAATTGCGAGTAAAGATTTATTTTGAGGACTCTTTGTGAGAGCTAAGGCGACACCAAAATGATTAACTTCTTTTTCTCAGGCTTGGAGCCATTATGTTATATACTTACCTAGGATTATGGAACGTGATTAACTAGAAGTCTTATGTCTCGACTTCACTTTTATACGTTTTTTAACCCCCTTTTTCTGTAGTCTTCTTGTTAATCTATTTACTTTCGTGGGGTTTCTTCTCCCTTTTATCTCTTTTTTAATAGTCTTTAGTATTTTTGTAAAGCTCATTGGGAATCGCCACAATTTTTTGAAGTGACCGGCCTTGTTTGAATTTCTCTTCGCCCACAATTCATTTTGCAGTCCCTTATTGATCTGTGGTTAAAGACATCAGTTCTTATTTTTCTTCAACCTTCTGCTTTCACTTCCCCCAAATGGTTTTTATTCCGTATGCTAGATATAAAGCAATGCTATTTGTAATTTAAGTCAAACTGTTTTGGCCCTAACTATGCCTTAGACTATGCTCTTGCCGTGCTTTTGTTTGATGCAAACCTTAACCTTGTATCTATATGAAGGTTTCTAATACACGGCACAAATTTCTGTTAATTTTCATTTTTCACTTTCATTAATTGACTTTAGTCGATAAGGATCTTTGGATCTAGCATTTCAAGTGCGGATTGTTTCAAAATTTGAATATTGAACTGATGTAGCATTTTGTACCAAAAATCAAATGAGAAAAAGATGATTGAACATATACGAGCCTTGCAGTAAAGCGAACACTAATATTATGAATGGGCATCTTTAGGCCATGACATACCCCTCTCCAAGTTAACATCGACTTCAACCTTTTTATACATTCCTTTTTCCTTTACGTCCTGCTTACTAAAATTTACTAACTGTTTTTTGTGGTTACCAGAGATTTGGGACGCACTACGAGCAGCTGCCGAAGCCGAGCTTTCCCTTGCGCAAGCCATCATAGACAGTGCAGGGGTAATCATCCAAAATGCAGATTTGACAATCTGCTACGACGAGAGAGGTCCATACCATTGCTTCATTTAAGAAATTACGATACGTTATTTTAGTTTAGTCATCGGTATCGTTATACCATCGCTCAATCTTACCGCAGGCACAAAATATGAACTACCCAACTATGTTTTGAGTGAGCCAACCAATTTGATTCGTGATAGTTCATAAAGAGGTAACCATAACTTCATTTCTGCTCTAGCTGAAATCACACAGGTCTGAATAATGCTTGCTTTTAAAAGGTTTCATTTTGGTCCTTGATACAAAAATACATTATTCATTCCTCTAACTTTTTCTGTAAGTTGCTTTACTCTAAATGGACAAATTGCAACATCCCTTTTCACATTTTTTTGTACAAAAAAAACCCTTCATTTCATTTGGTTTAGCAGTGTCATAAGTTACTTGATTACTTGTATAAATTAAGATTCGATCTAGAATGACTGAAAGTTTGAAAGCTCTGTGATTGATTGTCGTATAGAGAGAAGAAAAAAAAGAGCAATATTGTGGAAAAGTGCTTTCTTCATCTTTTAGTTTGAATCTTTTTTACCTGAAAGAATGGTATTTTGGTATGCTTTGTTTGAAAAAGCATTAAAAAAGAAAGCCCCTGGAGAAGGGATAGATGACCCAAATGGCGTAGAAAGTGCTTTCAACAATGCTTTTTTGGTCATTTCTACCAAGAAAAGGCTGCTCTTTATCAATCCAAATTCATTCCTTTGCTTGGCTATTGAGTTGAGTTTGATTTTGTTACTTTCACAAATAATCATGGTTGAGTAGACAAATGCATGTGGCCCTAAAGTTTTCTATTTTTTTGAGCATAAAAATTGGTCAAATTTATTATCGAATCCATCGTCCCACCCCGTCCCGCCCCGTCCCGCCCCTTTTGTTCACTATTGACCCAAGAAATTTAAAAGTTTCAATTTCATCCTTTCTACTCTTTTTTTCAGCTCAGTTCGAAGATTACAGAGTTAAAGATGGAACCATTGATTATAAATATTGATCAAAGGTTATTTGGTACTTAACATTACTCGTAGATAACCATATTTAAAATTATATATATTATATGTTTTGAGAACGAGATTCAGTGTAAAGCAAAACGGTCCACCCTCAAACAAGAAAGTCAAAGTGTTGACCAGTCTTACCCTTGGCTTTTGTTATCCTTCCCCCTTCACTCGCTATACCCTGGCGCGTCACTTCACGCACACATTTCTTCTTTTTTTTCTTTTTTTTTTCTTTGTTTGGTTAAAGATAAAAACATACCTCACTTTTTTCTATTTAAAAAATTATATTTTTTAAAGTTATAATATTTTATAATTAATTTTAGAGTATAAATAAATTAGAAAGGTGTGAAATTTATTTATTTATTTATTTATTATACGTCATTGCTATACCATTCTAATTTTAATTTTATCTCGAATTTATATTTCAATCCACATTAAATTTTATTTTATTTTTTAAAAAATTTATGAGTATTTATTAAATAATTTTTAGGAGTGTTTGTTAAATATTTTTTTAACATTTTTAATGTCTTATCTGTTAATTTCTTTATTTCACATAATTTACAAAATCAAAAGTATTAATACTTGAAGCATAGTAACCAAGTAATTGGACCTAAATTAAATGAGTACAAAATTATTTATATTATTAAAAAACGTAAAAAGAAAATTACTTTATTTTTTACAAAATAAAAAAATAAAAGTGAGGTAAGAGTGGGGCCCGATGGGGGCAGGGGCGGGACCCACAAGTGAAAGGTCGTGCTTATTGGCGTGATATGAGGGTGGGGTCACGTGAAAAAGCAGATAAAGCAAAGCCAAACACCACTCGCATCCCCATCATTATGTGCTGCTCCTTCCTACACCCAAATATATCCCAAAGCTCGACCCGACCCGAAAATCATACTCTCTCTCACGTGCGCCGAAAAAACCCGACACGTGTAGCTTCTCTATAGAGGCCGTTGAGAAACTCCACTCCACACAAGCTCCACCTGTCGAACTCTGTTTGGTTCTCTGTCAGAGACGGTTATTCAAACTTCAAACCCCATCTTATTATTTTATTTCTTTATTTCTTTGTTTTTTTTTTCTTTCTTTTTTTAAATTTTATATATGCCTATGTTGCCACTACCATTTTCACTAATTACATCCTTTTTCATCGTATTTATACTATCTTTTTTTATCTCGATATTATGAATGACACGTGGCTCCGTTCTTAGTGACATGACCGAGCGAGTTGCGATGGGGATCACACCCTATAATTGAGATGATGTCATGATATATAAACCATGTTAATGGGGAACTAAGATGACATGATGAGATGCAACGTTATAATGAGAGACATTGATTTCGAGTAAAGGTAAGGTCGAGCTAAAATTACTTGACATAACGTAGAGGCAAGTTGGTTATGTCACAAATGATTGAGCATACACGCCCATGTAGCGTGTGTAACCGAACAAACTTGAATTTTTATAAATTGTGCTCGATGGATGAAAGAGAAATCTTGTCTAAGGTCCGATATGAAACTATAAAATAAAGATAAAAACTTTTACTATAAAATTTTATTTTGAAAATATAATTTTATTTACTTTCCAAAATAAAAAGTTTAAAGAAAAAAAAAAAGAGATTAAAAAAGTAAATGGAAAATGAAATGAAAAGGTAGTGGCAGAACGGTAAATAAAAGGGTAATATTGGTTATTAAAAAGCCCATAAGCTCATTAAGCTTCTTATTCTGTGCTTCCAACCCTTCCATTTTTCACGGAAATGTTTCTCCTCTAGTTTCCCGGGCTTTGCCAGAGAAAAAAAGAGAACACTTTCCTCCGCCGTTCGCGGTGGTCCGATCTAAGATCCGATCGCCGTATTTGATCGGAGCCTTCGGCGAGTATCCAATTCAGATATATTCAGTTCTTCTTCTTCTTCTTACTTTTTGTTGTTTCTTGTCTGATTTATCCAGCGGTTTGTACTTCTCTTTCAGTTCGTTTCATTCACTTGTTACAGAGCCTCGAGGAATTCTCCGTTTTCTAGACTTTTGTCTTTCTTGTCCGACTTGTCTACTTCGAAGTTGCGAAAGAGGTTTTTACACTCAGTTTATTTTGTGTTTCGATCCTTGGACTCGAGTTGATTTCTGTTGGAAGATTTGTGTCTGTTCCTGTGAAGTTTTGTTTGTGATTGTAATTGAATCGTGTTCTTCTTGTGATAGACGGAGGCAATTCGAAAGAATTGCTTACTGA

mRNA sequence

GCCTAATCTTTCCTTCTATCTGCCTGTGAATTGAAGCTTCTGTTCTAGCGAGACGCAATGGGCTGTGCTGGATCGTCGCAGACCAACGGGGAAGGTTCCATAAAGAAAATACGCAAGCCAAAATCTTGGAAGCATCCTCAGCCAATTACAAGGTTTCAGCTTGTGCAACTGCGGGAGGAGTTCTGGGACACTGCACCTCACTATGGTGGCCGAAAAGAGATTTGGGACGCACTACGAGCAGCTGCCGAAGCCGAGCTTTCCCTTGCGCAAGCCATCATAGACAGTGCAGGGGTAATCATCCAAAATGCAGATTTGACAATCTGCTACGACGAGAGAGGCACAAAATATGAACTACCCAACTATGTTTTGATTTCCCGGGCTTTGCCAGAGAAAAAAAGAGAACACTTTCCTCCGCCGTTCGCGGTGGTCCGATCTAAGATCCGATCGCCGTATTTGATCGGAGCCTTCGGCGAGTATCCAATTCAGATATATTCAGTTCTTCTTCTTCTTCTTACTTTTTGTTGTTTCTTGTCTGATTTATCCAGCGGTTTGTACTTCTCTTTCAGTTCGTTTCATTCACTTGTTACAGAGCCTCGAGGAATTCTCCGTTTTCTAGACTTTTGTCTTTCTTGTCCGACTTGTCTACTTCGAAGTTGCGAAAGAGGTTTTTACACTCAGTTTATTTTGTGTTTCGATCCTTGGACTCGAGTTGATTTCTGTTGGAAGATTTGTGTCTGTTCCTGTGAAGTTTTGTTTGTGATTGTAATTGAATCGTGTTCTTCTTGTGATAGACGGAGGCAATTCGAAAGAATTGCTTACTGA

Coding sequence (CDS)

ATGGGCTGTGCTGGATCGTCGCAGACCAACGGGGAAGGTTCCATAAAGAAAATACGCAAGCCAAAATCTTGGAAGCATCCTCAGCCAATTACAAGGTTTCAGCTTGTGCAACTGCGGGAGGAGTTCTGGGACACTGCACCTCACTATGGTGGCCGAAAAGAGATTTGGGACGCACTACGAGCAGCTGCCGAAGCCGAGCTTTCCCTTGCGCAAGCCATCATAGACAGTGCAGGGGTAATCATCCAAAATGCAGATTTGACAATCTGCTACGACGAGAGAGGCACAAAATATGAACTACCCAACTATGTTTTGATTTCCCGGGCTTTGCCAGAGAAAAAAAGAGAACACTTTCCTCCGCCGTTCGCGGTGGTCCGATCTAAGATCCGATCGCCGTATTTGATCGGAGCCTTCGGCGAGTATCCAATTCAGATATATTCAGTTCTTCTTCTTCTTCTTACTTTTTGTTGTTTCTTGTCTGATTTATCCAGCGGTTTGTACTTCTCTTTCAGTTCGTTTCATTCACTTGTTACAGAGCCTCGAGGAATTCTCCGTTTTCTAGACTTTTGTCTTTCTTGTCCGACTTGTCTACTTCGAAGTTGCGAAAGAGGTTTTTACACTCAGTTTATTTTGTGTTTCGATCCTTGGACTCGAGTTGATTTCTGTTGGAAGATTTGTGTCTGTTCCTGTGAAGTTTTGTTTGTGATTGTAATTGAATCGTGTTCTTCTTGTGATAGACGGAGGCAATTCGAAAGAATTGCTTACTGA

Protein sequence

MGCAGSSQTNGEGSIKKIRKPKSWKHPQPITRFQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGTKYELPNYVLISRALPEKKREHFPPPFAVVRSKIRSPYLIGAFGEYPIQIYSVLLLLLTFCCFLSDLSSGLYFSFSSFHSLVTEPRGILRFLDFCLSCPTCLLRSCERGFYTQFILCFDPWTRVDFCWKICVCSCEVLFVIVIESCSSCDRRRQFERIAY
Homology
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BLAST of CmaCh16G004320 vs. Swiss-Prot
Match: UBTD2_DANRE (Ubiquitin domain-containing protein 2 OS=Danio rerio GN=ubtd2 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.0e-19
Identity = 53/104 (50.96%), Postives = 65/104 (62.50%), Query Frame = 1 

Query: 5   GSSQTNGEGSIKKIRKPKSWKHPQPITRFQLVQLREEFWDTAPHYGGRKEIWDALRAAAE 64
           G+    G     K  KPK WK   P+T  QL   R+EFWDTAP + GRKEIWDAL+AAA+
Sbjct: 21  GTGVALGRNQPLKREKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAQ 80

Query: 65  A----ELSLAQAIIDSAGVIIQNADLTICYDERGTKYELPNYVL 105
           A    +  LAQAIID A + + +  LT CYDE G +Y+LP Y L
Sbjct: 81  AFESNDHELAQAIIDGASITLPHGALTECYDELGNRYQLPVYCL 123

[Close]
BLAST of CmaCh16G004320 vs. Swiss-Prot
Match: UBTD2_BOVIN (Ubiquitin domain-containing protein 2 OS=Bos taurus GN=UBTD2 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 5.2e-19
Identity = 57/114 (50.00%), Postives = 70/114 (61.40%), Query Frame = 1 

Query: 4   AGSSQTNGEGS---------IKKIRKPKSWKHPQPITRFQLVQLREEFWDTAPHYGGRKE 63
           +GS   N EG+         +KK  KPK WK   P+T  QL   R+EFWDTAP + GRKE
Sbjct: 12  SGSLNENSEGTGVALGRNQPLKK-EKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKE 71

Query: 64  IWDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICYDERGTKYELPNYVL 105
           IWDAL+AAA A    +  LAQAIID A + + +  LT CYDE G +Y+LP Y L
Sbjct: 72  IWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCL 123

[Close]
BLAST of CmaCh16G004320 vs. Swiss-Prot
Match: UBTD2_HUMAN (Ubiquitin domain-containing protein 2 OS=Homo sapiens GN=UBTD2 PE=1 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 5.2e-19
Identity = 57/114 (50.00%), Postives = 70/114 (61.40%), Query Frame = 1 

Query: 4   AGSSQTNGEGS---------IKKIRKPKSWKHPQPITRFQLVQLREEFWDTAPHYGGRKE 63
           +GS   N EG+         +KK  KPK WK   P+T  QL   R+EFWDTAP + GRKE
Sbjct: 12  SGSLNENSEGTGVALGRNQPLKK-EKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKE 71

Query: 64  IWDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICYDERGTKYELPNYVL 105
           IWDAL+AAA A    +  LAQAIID A + + +  LT CYDE G +Y+LP Y L
Sbjct: 72  IWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCL 123

[Close]
BLAST of CmaCh16G004320 vs. Swiss-Prot
Match: UBTD1_DANRE (Ubiquitin domain-containing protein 1 OS=Danio rerio GN=ubtd1 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 5.2e-19
Identity = 58/121 (47.93%), Postives = 72/121 (59.50%), Query Frame = 1 

Query: 2   GCAGS--SQTNGEGS------------IKKIRKPKSWKHPQPITRFQLVQLREEFWDTAP 61
           GC G   ++T G GS            +KK  KPK WK   P+T  QL   R+EFWDTAP
Sbjct: 3   GCVGRERAETRGRGSRTQRKRGGRNEPLKK-DKPK-WKSDYPMTEGQLRSKRDEFWDTAP 62

Query: 62  HYGGRKEIWDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICYDERGTKYELPNYV 105
            + GRKEIWDAL+AAA A    +  LAQAI+D A + + +  LT CYDE G +Y+LP Y 
Sbjct: 63  AFEGRKEIWDALKAAAVALECSDHELAQAIVDGANITLPHGSLTECYDELGNRYQLPVYC 121

[Close]
BLAST of CmaCh16G004320 vs. Swiss-Prot
Match: UBTD2_MOUSE (Ubiquitin domain-containing protein 2 OS=Mus musculus GN=Ubtd2 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.8e-19
Identity = 53/104 (50.96%), Postives = 64/104 (61.54%), Query Frame = 1 

Query: 5   GSSQTNGEGSIKKIRKPKSWKHPQPITRFQLVQLREEFWDTAPHYGGRKEIWDALRAAAE 64
           G+    G     K  KPK WK   P+T  QL   R+EFWDTAP + GRKEIWDAL+AAA 
Sbjct: 21  GTGVALGRNQPLKKEKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAH 80

Query: 65  A----ELSLAQAIIDSAGVIIQNADLTICYDERGTKYELPNYVL 105
           A    +  LAQAIID A + + +  LT CYDE G +Y+LP Y L
Sbjct: 81  AFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCL 123

[Close]
BLAST of CmaCh16G004320 vs. TrEMBL
Match: A0A0A0KVJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G083480 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 9.8e-49
Identity = 95/104 (91.35%), Postives = 99/104 (95.19%), Query Frame = 1 

Query: 1   MGCAGSSQTNGEGSIKKIRKPKSWKHPQPITRFQLVQLREEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQT  +GSIKKIRKPKSWKHPQPITR QL QLR+EFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGTKYELPNYVL 105
           AAAEAELSLAQAI+DSAGVI+QNADLTICYDERG KYELPNYVL
Sbjct: 61  AAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVL 104

[Close]
BLAST of CmaCh16G004320 vs. TrEMBL
Match: M5X7X0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013589mg PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.0e-46
Identity = 88/104 (84.62%), Postives = 99/104 (95.19%), Query Frame = 1 

Query: 1   MGCAGSSQTNGEGSIKKIRKPKSWKHPQPITRFQLVQLREEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQT G+G++KK+RKPK WKHPQP+T+ QL+QLREEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQTKGDGALKKVRKPKPWKHPQPLTKSQLLQLREEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGTKYELPNYVL 105
           AAAEA+LSLAQAI+DSAGVI+Q+ADLTICYDERG KYELP YVL
Sbjct: 61  AAAEADLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVL 104

[Close]
BLAST of CmaCh16G004320 vs. TrEMBL
Match: B9SEV6_RICCO (Ubiquitin domain-containing protein, putative OS=Ricinus communis GN=RCOM_0106280 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.0e-45
Identity = 88/104 (84.62%), Postives = 96/104 (92.31%), Query Frame = 1 

Query: 1   MGCAGSSQTNGEGSIKKIRKPKSWKHPQPITRFQLVQLREEFWDTAPHYGGRKEIWDALR 60
           MGC GSS   G+G++KKIRKPK WKHPQPIT+ QLVQ+R+EFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCVGSSHAKGDGTMKKIRKPKPWKHPQPITKSQLVQMRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGTKYELPNYVL 105
           AAAEAELSLAQAI+DSAGVI+QNADLTICYDERG KYELP YVL
Sbjct: 61  AAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPKYVL 104

[Close]
BLAST of CmaCh16G004320 vs. TrEMBL
Match: B9I1R9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s10900g PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.3e-45
Identity = 87/104 (83.65%), Postives = 97/104 (93.27%), Query Frame = 1 

Query: 1   MGCAGSSQTNGEGSIKKIRKPKSWKHPQPITRFQLVQLREEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQ   +G++KKIRKPK WKHPQPIT+ QL+Q+R+EFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQAKSDGNVKKIRKPKPWKHPQPITKSQLMQMRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGTKYELPNYVL 105
           AAA+AELSLAQAI+DSAGVI+QNADLTICYDERG KYELP YVL
Sbjct: 61  AAADAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPKYVL 104

[Close]
BLAST of CmaCh16G004320 vs. TrEMBL
Match: A0A061FG33_THECC (Ubiquitin domain-containing protein OS=Theobroma cacao GN=TCM_032011 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.3e-45
Identity = 87/104 (83.65%), Postives = 97/104 (93.27%), Query Frame = 1 

Query: 1   MGCAGSSQTNGEGSIKKIRKPKSWKHPQPITRFQLVQLREEFWDTAPHYGGRKEIWDALR 60
           MGCAGS+   G+G++KKIRKPK WKHPQPIT+ QLVQ+REEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSTPAKGDGNVKKIRKPKPWKHPQPITKSQLVQMREEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGTKYELPNYVL 105
           AAAEA+L+LAQAI+DSAGVI+QNADLTICYDERG KYELP YVL
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQNADLTICYDERGAKYELPKYVL 104

[Close]
BLAST of CmaCh16G004320 vs. TAIR10
Match: AT1G53400.1 (AT1G53400.1 Ubiquitin domain-containing protein)

HSP 1 Score: 185.3 bits (469), Expect = 4.8e-47
Identity = 83/104 (79.81%), Postives = 96/104 (92.31%), Query Frame = 1 

Query: 1   MGCAGSSQTNGEGSIKKIRKPKSWKHPQPITRFQLVQLREEFWDTAPHYGGRKEIWDALR 60
           MGCAGS+Q+  +GS+KKIRKPK WKH QPIT+ +L++LREEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSTQSQADGSVKKIRKPKPWKHTQPITKAELMKLREEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGTKYELPNYVL 105
           AAAEA++SLAQAI+DSAGVI+QN DLT+CYDERG KYELP YVL
Sbjct: 61  AAAEADISLAQAIVDSAGVIVQNTDLTVCYDERGAKYELPKYVL 104

[Close]
BLAST of CmaCh16G004320 vs. TAIR10
Match: AT1G16960.1 (AT1G16960.1 Ubiquitin domain-containing protein)

HSP 1 Score: 164.5 bits (415), Expect = 8.7e-41
Identity = 78/105 (74.29%), Postives = 93/105 (88.57%), Query Frame = 1 

Query: 1   MGCAGSSQTNGEGSIKKIRKPKSWKHPQPITRFQLVQLREEFWDTAPHYGGRKEIWDALR 60
           MGC+ SS+T  EG  +KIR+PK+WKHPQPI+R +L Q+REEFWDTAPHYGG+KEIWDALR
Sbjct: 1   MGCS-SSRTIAEGKKEKIRRPKTWKHPQPISRDELTQMREEFWDTAPHYGGKKEIWDALR 60

Query: 61  AAAEA-ELSLAQAIIDSAGVIIQNADLTICYDERGTKYELPNYVL 105
           AAAE  +LSLAQ I++SAGVI+QN DLTICYDE+G+KYELP YVL
Sbjct: 61  AAAEEDDLSLAQTILESAGVIVQNTDLTICYDEKGSKYELPKYVL 104

[Close]
BLAST of CmaCh16G004320 vs. TAIR10
Match: AT5G45740.1 (AT5G45740.1 Ubiquitin domain-containing protein)

HSP 1 Score: 160.6 bits (405), Expect = 1.3e-39
Identity = 74/106 (69.81%), Postives = 86/106 (81.13%), Query Frame = 1 

Query: 1   MGCAGSSQTNGEGSIK--KIRKPKSWKHPQPITRFQLVQLREEFWDTAPHYGGRKEIWDA 60
           MGC GSSQ   EG  K  KI KPK W H +PITR QL  +REEFWDT+PHYGG++EIW+A
Sbjct: 1   MGCIGSSQARNEGGAKRKKIMKPKPWAHTEPITRAQLTNMREEFWDTSPHYGGQREIWEA 60

Query: 61  LRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGTKYELPNYVL 105
           LRAAAEA+L LAQ I+DSAGVI+QN DLT+C+DERG +YELP YVL
Sbjct: 61  LRAAAEADLKLAQTIVDSAGVIVQNRDLTLCWDERGARYELPRYVL 106

[Close]
BLAST of CmaCh16G004320 vs. NCBI nr
Match: gi|449438909|ref|XP_004137230.1| (PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 1.4e-48
Identity = 95/104 (91.35%), Postives = 99/104 (95.19%), Query Frame = 1 

Query: 1   MGCAGSSQTNGEGSIKKIRKPKSWKHPQPITRFQLVQLREEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQT  +GSIKKIRKPKSWKHPQPITR QL QLR+EFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGTKYELPNYVL 105
           AAAEAELSLAQAI+DSAGVI+QNADLTICYDERG KYELPNYVL
Sbjct: 61  AAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVL 104

[Close]
BLAST of CmaCh16G004320 vs. NCBI nr
Match: gi|659101695|ref|XP_008451743.1| (PREDICTED: ubiquitin domain-containing protein 2-like [Cucumis melo])

HSP 1 Score: 197.6 bits (501), Expect = 2.6e-47
Identity = 93/104 (89.42%), Postives = 97/104 (93.27%), Query Frame = 1 

Query: 1   MGCAGSSQTNGEGSIKKIRKPKSWKHPQPITRFQLVQLREEFWDTAPHYGGRKEIWDALR 60
           MGCAGSS T  +GSIKKIRKPKSWKHPQPITR QL QLR+EFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGTKYELPNYVL 105
           AAAEAELSLAQ I+DSAGVI+QNADLTICYDERG KYELPNYVL
Sbjct: 61  AAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELPNYVL 104

[Close]
BLAST of CmaCh16G004320 vs. NCBI nr
Match: gi|694411304|ref|XP_009334023.1| (PREDICTED: ubiquitin domain-containing protein 1-like [Pyrus x bretschneideri])

HSP 1 Score: 194.1 bits (492), Expect = 2.9e-46
Identity = 87/104 (83.65%), Postives = 99/104 (95.19%), Query Frame = 1 

Query: 1   MGCAGSSQTNGEGSIKKIRKPKSWKHPQPITRFQLVQLREEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQT G+G++KK+RKPK WKHPQP+T+ QL+QLREEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQTKGDGTLKKVRKPKPWKHPQPLTKSQLLQLREEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGTKYELPNYVL 105
           AA+EA++SLAQAI+DSAGVI+QNADLTICYDERG KYELP YVL
Sbjct: 61  AASEADISLAQAIVDSAGVIVQNADLTICYDERGAKYELPKYVL 104

[Close]
BLAST of CmaCh16G004320 vs. NCBI nr
Match: gi|595904566|ref|XP_007213986.1| (hypothetical protein PRUPE_ppa013589mg [Prunus persica])

HSP 1 Score: 194.1 bits (492), Expect = 2.9e-46
Identity = 88/104 (84.62%), Postives = 99/104 (95.19%), Query Frame = 1 

Query: 1   MGCAGSSQTNGEGSIKKIRKPKSWKHPQPITRFQLVQLREEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQT G+G++KK+RKPK WKHPQP+T+ QL+QLREEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQTKGDGALKKVRKPKPWKHPQPLTKSQLLQLREEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGTKYELPNYVL 105
           AAAEA+LSLAQAI+DSAGVI+Q+ADLTICYDERG KYELP YVL
Sbjct: 61  AAAEADLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVL 104

[Close]
BLAST of CmaCh16G004320 vs. NCBI nr
Match: gi|694430909|ref|XP_009342907.1| (PREDICTED: ubiquitin domain-containing protein 1-like [Pyrus x bretschneideri])

HSP 1 Score: 192.6 bits (488), Expect = 8.5e-46
Identity = 87/104 (83.65%), Postives = 99/104 (95.19%), Query Frame = 1 

Query: 1   MGCAGSSQTNGEGSIKKIRKPKSWKHPQPITRFQLVQLREEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQT G+G++KKIRKPK WKHPQP+T+ QL+Q+REEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQTKGDGALKKIRKPKPWKHPQPLTKSQLLQMREEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGTKYELPNYVL 105
           AA+EA+LSLAQAI+DSAGVI+Q+ADLTICYDERG KYELP YVL
Sbjct: 61  AASEADLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVL 104

The following BLAST results are available for this feature:
BLAST of CmaCh16G004320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UBTD2_DANRE4.0e-1950.96Ubiquitin domain-containing protein 2 OS=Danio rerio GN=ubtd2 PE=2 SV=1[more]
UBTD2_BOVIN5.2e-1950.00Ubiquitin domain-containing protein 2 OS=Bos taurus GN=UBTD2 PE=2 SV=1[more]
UBTD2_HUMAN5.2e-1950.00Ubiquitin domain-containing protein 2 OS=Homo sapiens GN=UBTD2 PE=1 SV=2[more]
UBTD1_DANRE5.2e-1947.93Ubiquitin domain-containing protein 1 OS=Danio rerio GN=ubtd1 PE=2 SV=1[more]
UBTD2_MOUSE6.8e-1950.96Ubiquitin domain-containing protein 2 OS=Mus musculus GN=Ubtd2 PE=2 SV=1[more]
BLAST of CmaCh16G004320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVJ9_CUCSA9.8e-4991.35Uncharacterized protein OS=Cucumis sativus GN=Csa_4G083480 PE=4 SV=1[more]
M5X7X0_PRUPE2.0e-4684.62Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013589mg PE=4 SV=1[more]
B9SEV6_RICCO1.0e-4584.62Ubiquitin domain-containing protein, putative OS=Ricinus communis GN=RCOM_010628... [more]
B9I1R9_POPTR1.3e-4583.65Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s10900g PE=4 SV=1[more]
A0A061FG33_THECC1.3e-4583.65Ubiquitin domain-containing protein OS=Theobroma cacao GN=TCM_032011 PE=4 SV=1[more]
BLAST of CmaCh16G004320 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G53400.14.8e-4779.81 Ubiquitin domain-containing protein[more]
AT1G16960.18.7e-4174.29 Ubiquitin domain-containing protein[more]
AT5G45740.11.3e-3969.81 Ubiquitin domain-containing protein[more]
BLAST of CmaCh16G004320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449438909|ref|XP_004137230.1|1.4e-4891.35PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis sativus][more]
gi|659101695|ref|XP_008451743.1|2.6e-4789.42PREDICTED: ubiquitin domain-containing protein 2-like [Cucumis melo][more]
gi|694411304|ref|XP_009334023.1|2.9e-4683.65PREDICTED: ubiquitin domain-containing protein 1-like [Pyrus x bretschneideri][more]
gi|595904566|ref|XP_007213986.1|2.9e-4684.62hypothetical protein PRUPE_ppa013589mg [Prunus persica][more]
gi|694430909|ref|XP_009342907.1|8.5e-4683.65PREDICTED: ubiquitin domain-containing protein 1-like [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
Vocabulary: Molecular Function
TermDefinition
GO:0043130ubiquitin binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0043130 ubiquitin binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G004320.1CmaCh16G004320.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13609UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATEDcoord: 1..104
score: 7.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh16G004320Cucsa.273680Cucumber (Gy14) v1cgycmaB0759
CmaCh16G004320Csa4G083480Cucumber (Chinese Long) v2cmacuB337
CmaCh16G004320MELO3C016122Melon (DHL92) v3.5.1cmameB301
CmaCh16G004320ClCG11G017380Watermelon (Charleston Gray)cmawcgB288
CmaCh16G004320ClCG07G010180Watermelon (Charleston Gray)cmawcgB300
CmaCh16G004320CSPI04G22780Wild cucumber (PI 183967)cmacpiB345
CmaCh16G004320CSPI04G07920Wild cucumber (PI 183967)cmacpiB342
CmaCh16G004320CmoCh16G004640Cucurbita moschata (Rifu)cmacmoB322
CmaCh16G004320Lsi07G002840Bottle gourd (USVL1VR-Ls)cmalsiB329
CmaCh16G004320Lsi04G020030Bottle gourd (USVL1VR-Ls)cmalsiB311
CmaCh16G004320Cp4.1LG01g00630Cucurbita pepo (Zucchini)cmacpeB352
CmaCh16G004320Cp4.1LG14g03530Cucurbita pepo (Zucchini)cmacpeB344
CmaCh16G004320MELO3C016122.2Melon (DHL92) v3.6.1cmamedB351
CmaCh16G004320CsaV3_4G033020Cucumber (Chinese Long) v3cmacucB0396
CmaCh16G004320CsaV3_4G008140Cucumber (Chinese Long) v3cmacucB0393
CmaCh16G004320Cla97C07G136860Watermelon (97103) v2cmawmbB350
CmaCh16G004320Cla97C11G223470Watermelon (97103) v2cmawmbB340
CmaCh16G004320Bhi09G002880Wax gourdcmawgoB0451
CmaCh16G004320Bhi01G002489Wax gourdcmawgoB0437
CmaCh16G004320CsGy4G007790Cucumber (Gy14) v2cgybcmaB498
CmaCh16G004320CsGy4G021220Cucumber (Gy14) v2cgybcmaB500
CmaCh16G004320Carg11362Silver-seed gourdcarcmaB0924
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh16G004320CmaCh04G006650Cucurbita maxima (Rimu)cmacmaB352
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh16G004320Cucurbita pepo (Zucchini)cmacpeB351
CmaCh16G004320Cucurbita pepo (Zucchini)cmacpeB353
CmaCh16G004320Silver-seed gourdcarcmaB0052
CmaCh16G004320Silver-seed gourdcarcmaB0053
CmaCh16G004320Cucurbita maxima (Rimu)cmacmaB351
CmaCh16G004320Cucurbita maxima (Rimu)cmacmaB353
CmaCh16G004320Cucurbita moschata (Rifu)cmacmoB338
CmaCh16G004320Cucurbita moschata (Rifu)cmacmoB339
CmaCh16G004320Cucurbita moschata (Rifu)cmacmoB340
CmaCh16G004320Watermelon (97103) v1cmawmB308
CmaCh16G004320Watermelon (97103) v1cmawmB325