Cp4.1LG01g00630 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g00630
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ubiquitin domain-containing protein
Location	Cp4.1LG01 : 3462923 .. 3467517 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACGTGACAGCTAACTACCGCATTCACAGCCCCAACCCCCTCGCCCTTGTCTTAATCCCACACTAATTTTAATTATGATAATAATTAAATTAAATCAACTAATTTCTTATTTGCTTAAATTCAATATTCGTCAGAGCTTCTTCTTCTTCTTCTTCTTCTTTCATCCTCCTTCTCTACAAAAAGCTTATTCTTCGGTTCTGCAAAATTCTTCCATTCCAGCTCTCCACCGAGTTTCTGCTTTTCTCTGGCTTCGTTTTTGTATCTGTCTACTTGTGAATTGAGGCTTGCGTTCAAGCAAACGGCAATGGGCTGTGTTGGATCGTCGCAGACCAACGGAGATGGTGAGGTTCACTTCGCTTCTGTGATTCTTTCTTTGATTATTGGAGATTTTTTGTTCTATGTTTGGCTGCTGTGTTGACTATGAGGAATATAGATGATAATCAATGCAAGTTGATTTGTTGGGAGAGCGGGAGTGTTGGTCTTCTGGTATTGAATTTGTTCGGAATGGATTGGATTGGTCTTGATTTTCTTTGTTTGTTGCGTCTGTTTTCTTGATTTTCATTCTGTGGTTATCGCGTTGCTCGATTGTGTGCGTTTGTTTGTTTTGAGACTATGACAGTGGTTCGAAGCCTCGAGATTCTTTCACTTTACTTGCATTAATTAGGATAATTAAATTTTCAATTTAGATAATTGAGTTAAATTGTGGAAATAATTTCATCCTTCATTTATTTTGAGAATGATGGATTTTTTTTTAAAGGTTGATTAGAATTACTGCTGGCGTATTTATTGACAGTTGCTGCTGGTGATTCAAATTCTACAAGTGATTCTTTCAGTTTCGGATCAATGAAGTCATCATGAATTGCATTCAAAATCTTGGCATATTTGTGGCTAAAGAATAGTTTCGCATTCAAAGAATTTGATTAGATTAAAAGTGTTGTGATATTAGAACATTACGACTAAAATTTCAGCAACTAACATATGAATGGACGGTATCTAATATTTCTACTTTATACTGCAATCAAAACGAAAATTTATAGAAGCTCTGTACAACATGCTAGTTTGCGGGATGTCAATTGTCTTTTGACTCTTTTCTAATCTGCAAAATGGCTAAGGTATCGCTGTACATGAATTCCTCCCTTCCCCGATCTCTATTCTCATAACAAATTCTGAAAAAAAAAACAGGAATTGCTGAATTCTTGTATAATTGGAAGAAAACGCTTCTGAGGACACTGAAACGGAAAGAAAGCACTTATAGAAAGTAGAGAAAATGAAAGAAAAAATAGGAAAATTTTAGGTCGAAGCTTTCTAATTCTCCTTGTGTTGTTAAAGTACTGAAGGTTTAGGAATTTTATTTGAACTTTTCAAGGCTTCCCTTTGTTATCAGTGCTGCTACACTTGAACATGGTTTAGTTGGTTTGTACTTTATTCAAGCCATTTGACATATGACTGAAACTGCTTCTTTGTGTAGGATCCACAAAGAAGATACGCAAGCCAAAACCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTCACGCAGCTACGTGATGAGTTTTGGGACACTGCACCTCACTATGGCGGCCGAAATGGTAGTCCTGTCTCTAACATATTTGTGCCAGTGTTAAAGTCTTCATGGTTTTTTAGAGGTTAGCTGATCAAAAGAATTACTGAGAGTTTAGCTAATTAGGAATAAGCCTTACAGATTATATCAAGTATTTCATGATTTCTGATTTCAGAATCTACTTTCTTTCTCGATAAAAATGCAAAACTACGGATAGATGACCATCACATTCATGGAAAAGGGTGAATACTGTAGTTGCAGGGGATCCAATGAAGGTTGGGACGAATTATCTCTTGGATATGACAATGATGTCATTCACAGCTGTATGCACAATTATTGGACCTCTTTCCAATTTCTAGGATCCTACCATTTGTCTTCCCTGTTTCCTAATAAACTAAGTTCTCGGTTTGGGAGATAAGGTTTCCTATTTTTGTGCCGATTACAGATTGCCGTTACCAACATCCAAGAATTTCATTTCACATGTAGGCTTTTCCAATTATTTCATTTCGGTTTGTGCCCATTTCGAAGGGGGATGCTTCTGGGAAGAAATGTGCTTCAGAGAGTTCGTTAAAGTTTTTGGTCCAATTGATTTAGTTTTTTTTATTACGTAGTTAACCATTAAGTATTTTATGAATATTGGCTTTTAGTTCTTGAATGGATACATCTTTAGAATCAGTTTCAATTGTAAGCCAAGATTTCTTTTGAGGACTCTCTGTGAGAGCTTAGGTTACACCAAAATGATTTTCTTTTTTCTTATGCTTAGAGTACTCATTATGTGATTTTACCTAGGATTATGGAACTTGATTAACTATAGAAACTTGTGTCTGGACTTGATCTTTTGTTGGTTTATGTTTTGGGCCGGCTTCTTGTTATTTTGTTTTCTTTCTTCTTGTTTCTTTTCCCTTTTCCTGTGCCTTTTAGTGGCCTTTAGTATTTTCGTAAAAAAGCTTCATGAAAGCCCATTGATAATCGCCACAAAATTTTGAAATGGCCTGCCTCATTCGAATTTCTCTTCTCTCATAATGTATCTTGCAATCCGTTATTGATTTGAGCTAAGAGACATTAGTTATTATTTCTCTCCAACCTTCACCTTTCACTTCCCCCGACTGATTTTTCCCCATTGCATACTAGATTGAAAGCAATGCTATTTGTAGTTCAAAGTCAAACTCTTTTGGCCCGAACTTTGTCCTGGACTACATTCTTGCTGTTTGATGCAAACTTTAACCTTTATGAAGGTTTCTGATACACATCACTACTTTCTGTTAATTTTCTATCTTATTAAATGCCTTTTTCCAAGAGAAAACAACTTGATTTTAGTTGCCAATTGAAACGTTAGATCCCCGGGTATATGGTTGTTGGAAATAGCCAAATAAAGTGTCAGTTCCAAAGATCCTACAATCTTCTACTGGTCAATCCTCTAACGTATCTCCCCAAGATATAGAGTGAGGGTATCTCTTTGGAATCCCGAACAAATATGGAAATGATGTAGGATTTTGTACCAAAATCACAATTCACAAGAGAAAAAGATGATTGACTAATTCACAGGCCTTGCAATAAAGAGAACACTAATATATTGAGAGGGCACCATTATTTAGTTTTCTGAAAGTCAATTTATGAAAAGGATCAGAAGGCAGGCTTCTAATCGAGTAAATTAGGGAGGATTAAAGACAAATCATGAGAAACATGAATAATAAAGACAGCCAAGTCTTTCTTCTTTGATTTTAAATTGGCGTCTGTATGTAACTCACCTATTGGTGTTTGAATTTTTTACTCCGTTATTTCGTTCATCAATTAAATTTGTCTCTTCTCTAGAAAAAGACTTACCCAAACAACCGTGATTTGAAAATTGTGTTAAAAGACATTGAAAGGTTCGGACTTCTAAGATGAGTTAGAAGTGAGCACAATTTCTAAAATAGCATTCTAGAACTTCCAATTCATCTAAAAGTATTTCAATGTCTCTTAGAAGAAAGGAAGATCAAGCCTCTCCAGTCTCTATCTTCTTTTATTTTATTTCCGTCCTTGGGCTACTACACACCCTTCAAGTCTTCAACATTGACCTCACCTTTCTTATACATTACTCTGTCCTTGACGGCCTGCTTACTAAAATTTACCAACAATTTTCGTTGATATCAGAGATTTGGGATGCACTACGAGCAGCTGCTGAAGCAGAGCTATCTCTAGCGCAAGCAATCATAGACAGTGCTGGGGTCATCGTTCAAAATGCAGATTTAACAGTTTGTTACGATGAGAGAGGTCCATACCATTGCTTCATTAAAGAAATTATGATATGTTATTTTAGTTTAACCATCAATATCATTTTTATCATTGCCAATCTTATTGCAGGTGCCAAATATGAACTGCCCAAATATGTTTTGAGTGAACCAACCAATTTGATTCGTGACAGTTCATAAAGAGGTAACTATGGTTTCCCTTTCTTTTTAGTTCAACTATATGTACGGCGAAAATTCAAATCTCTCACATGTTGGTCGAGGTTATAATACCTTAACTATTATGTTCAAATTGACTACTTTTCGTCGAGTTGAAATGCAATATGTAATGTATATAAATTGCAAAGGTTTAATTCTTATTTTGGTCTCAAATGGTTTGGGCAGAAATTAATTATTTGTCATGAACATTAACTTTTTTTATTAATATAAATGCAATAATTTCCTCATTTTCTTTCATCTTCTACAGAGCTGATCGATTTAATGCATTCATTGCGATCTCTTGGGTTCCATTAACTTTCTGTAAGATGCTTTTCTCAAAATGGACAAAGTGCAACATCCCTTTTCACATTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTCTGCCAGTTTAGCAGTGTCTTAAATTACTTGATTACTTGTATAAATAAAGATTCGACGAAAGACTCAGAGATTGAATGTCGTATAGAGCACAAAAAAAGAGCACAATAGTGTGAAGCACTGCTTTTTTCATCTTTATAGGCGTTTCTCATTTTAAATGTGGTATGAGTTTGATTTTCAGCTTATCCAAGTTTT

mRNA sequence

AACGTGACAGCTAACTACCGCATTCACAGCCCCAACCCCCTCGCCCTTGTCTTAATCCCACACTAATTTTAATTATGATAATAATTAAATTAAATCAACTAATTTCTTATTTGCTTAAATTCAATATTCGTCAGAGCTTCTTCTTCTTCTTCTTCTTCTTTCATCCTCCTTCTCTACAAAAAGCTTATTCTTCGGTTCTGCAAAATTCTTCCATTCCAGCTCTCCACCGAGTTTCTGCTTTTCTCTGGCTTCGTTTTTGTATCTGTCTACTTGTGAATTGAGGCTTGCGTTCAAGCAAACGGCAATGGGCTGTGTTGGATCGTCGCAGACCAACGGAGATGGATCCACAAAGAAGATACGCAAGCCAAAACCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTCACGCAGCTACGTGATGAGTTTTGGGACACTGCACCTCACTATGGCGGCCGAAATGGTAGTCCTGTCTCTAACATATTTGTGCCAGTGTTAAAGTCTTCATGGTTTTTTAGAGAGATTTGGGATGCACTACGAGCAGCTGCTGAAGCAGAGCTATCTCTAGCGCAAGCAATCATAGACAGTGCTGGGGTCATCGTTCAAAATGCAGATTTAACAGTTTGTTACGATGAGAGAGGTGCCAAATATGAACTGCCCAAATATGTTTTGAGTGAACCAACCAATTTGATTCGTGACAGTTCATAAAGAGAGCTGATCGATTTAATGCATTCATTGCGATCTCTTGGGTTCCATTAACTTTCTGTAAGATGCTTTTCTCAAAATGGACAAAGTGCAACATCCCTTTTCACATTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTCTGCCAGTTTAGCAGTGTCTTAAATTACTTGATTACTTGTATAAATAAAGATTCGACGAAAGACTCAGAGATTGAATGTCGTATAGAGCACAAAAAAAGAGCACAATAGTGTGAAGCACTGCTTTTTTCATCTTTATAGGCGTTTCTCATTTTAAATGTGGTATGAGTTTGATTTTCAGCTTATCCAAGTTTT

Coding sequence (CDS)

ATGGGCTGTGTTGGATCGTCGCAGACCAACGGAGATGGATCCACAAAGAAGATACGCAAGCCAAAACCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTCACGCAGCTACGTGATGAGTTTTGGGACACTGCACCTCACTATGGCGGCCGAAATGGTAGTCCTGTCTCTAACATATTTGTGCCAGTGTTAAAGTCTTCATGGTTTTTTAGAGAGATTTGGGATGCACTACGAGCAGCTGCTGAAGCAGAGCTATCTCTAGCGCAAGCAATCATAGACAGTGCTGGGGTCATCGTTCAAAATGCAGATTTAACAGTTTGTTACGATGAGAGAGGTGCCAAATATGAACTGCCCAAATATGTTTTGAGTGAACCAACCAATTTGATTCGTGACAGTTCATAA

Protein sequence

MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTVCYDERGAKYELPKYVLSEPTNLIRDSS

Homology

[Close]

BLAST of Cp4.1LG01g00630 vs. Swiss-Prot
Match: UBTD1_DANRE (Ubiquitin domain-containing protein 1 OS=Danio rerio GN=ubtd1 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 6.5e-21
Identity = 62/149 (41.61%), Postives = 80/149 (53.69%), Query Frame = 1


Query: 2   GCVGS--SQTNGDGS---------TKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHY 61
           GCVG   ++T G GS          + ++K KP WK   P+T  QL   RDEFWDTAP +
Sbjct: 3   GCVGRERAETRGRGSRTQRKRGGRNEPLKKDKPKWKSDYPMTEGQLRSKRDEFWDTAPAF 62

Query: 62  GGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEA----ELSLAQAIIDSAGVIVQNADL 121
            GR                   +EIWDAL+AAA A    +  LAQAI+D A + + +  L
Sbjct: 63  EGR-------------------KEIWDALKAAAVALECSDHELAQAIVDGANITLPHGSL 122

Query: 122 TVCYDERGAKYELPKYVLSEPTNLIRDSS 135
           T CYDE G +Y+LP Y L+ P NLI + S
Sbjct: 123 TECYDELGNRYQLPVYCLAPPVNLISERS 132

[Close]

BLAST of Cp4.1LG01g00630 vs. Swiss-Prot
Match: UBTD2_DANRE (Ubiquitin domain-containing protein 2 OS=Danio rerio GN=ubtd2 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 8.5e-21
Identity = 62/151 (41.06%), Postives = 80/151 (52.98%), Query Frame = 1


Query: 2   GCVGSSQT-------NGDGS------TKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAP 61
           GCVGS          N DG+       + +++ KP WK   P+T  QL   RDEFWDTAP
Sbjct: 3   GCVGSHHDSSGSLNENSDGTGVALGRNQPLKREKPKWKSDYPMTDGQLRSKRDEFWDTAP 62

Query: 62  HYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEA----ELSLAQAIIDSAGVIVQNA 121
            + GR                   +EIWDAL+AAA+A    +  LAQAIID A + + + 
Sbjct: 63  AFEGR-------------------KEIWDALKAAAQAFESNDHELAQAIIDGASITLPHG 122

Query: 122 DLTVCYDERGAKYELPKYVLSEPTNLIRDSS 135
            LT CYDE G +Y+LP Y LS P N+I + S
Sbjct: 123 ALTECYDELGNRYQLPVYCLSPPVNMIEEKS 134

[Close]

BLAST of Cp4.1LG01g00630 vs. Swiss-Prot
Match: UBTD1_XENLA (Ubiquitin domain-containing protein 1 OS=Xenopus laevis GN=ubtd1 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.5e-20
Identity = 62/151 (41.06%), Postives = 79/151 (52.32%), Query Frame = 1


Query: 2   GCVG-------SSQTNGDGS------TKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAP 61
           GCVG       S   N DG+       + ++K KP WK   P+T  QL   RDEFWDTAP
Sbjct: 3   GCVGTHHDSSGSLNENSDGTGVALGRNQPLKKDKPKWKSDYPMTDGQLRSKRDEFWDTAP 62

Query: 62  HYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEA----ELSLAQAIIDSAGVIVQNA 121
            + GR                   +EIWDAL+AAA A    +  LAQAIID A + + + 
Sbjct: 63  AFEGR-------------------KEIWDALKAAAHAFESNDHELAQAIIDGASITLPHG 122

Query: 122 DLTVCYDERGAKYELPKYVLSEPTNLIRDSS 135
            LT CYDE G +Y+LP Y L+ P N+I + S
Sbjct: 123 ALTECYDELGNRYQLPVYCLAPPINMIEEKS 134

[Close]

BLAST of Cp4.1LG01g00630 vs. Swiss-Prot
Match: UBTD2_MOUSE (Ubiquitin domain-containing protein 2 OS=Mus musculus GN=Ubtd2 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.5e-20
Identity = 62/151 (41.06%), Postives = 79/151 (52.32%), Query Frame = 1


Query: 2   GCVG-------SSQTNGDGS------TKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAP 61
           GCVG       S   N DG+       + ++K KP WK   P+T  QL   RDEFWDTAP
Sbjct: 3   GCVGAQHDSSGSLNENSDGTGVALGRNQPLKKEKPKWKSDYPMTDGQLRSKRDEFWDTAP 62

Query: 62  HYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEA----ELSLAQAIIDSAGVIVQNA 121
            + GR                   +EIWDAL+AAA A    +  LAQAIID A + + + 
Sbjct: 63  AFEGR-------------------KEIWDALKAAAHAFESNDHELAQAIIDGANITLPHG 122

Query: 122 DLTVCYDERGAKYELPKYVLSEPTNLIRDSS 135
            LT CYDE G +Y+LP Y L+ P N+I + S
Sbjct: 123 ALTECYDELGNRYQLPVYCLAPPINMIEEKS 134

[Close]

BLAST of Cp4.1LG01g00630 vs. Swiss-Prot
Match: UBTD1_XENTR (Ubiquitin domain-containing protein 1 OS=Xenopus tropicalis GN=ubtd1 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 4.2e-20
Identity = 61/152 (40.13%), Postives = 79/152 (51.97%), Query Frame = 1


Query: 2   GCVGS-------SQTNGDGSTKK-------IRKPKP-WKHPQPITRSQLTQLRDEFWDTA 61
           GCVG        SQ+   G  +K       ++K +P WK   P+T  QL   RDEFWDTA
Sbjct: 3   GCVGRPQGESQRSQSRASGQQRKRAGRNEPLKKERPRWKSDYPMTDGQLRSKRDEFWDTA 62

Query: 62  PHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEA----ELSLAQAIIDSAGVIVQN 121
           P + GR                   +EIWDAL+AAA A    +  LAQAI+D A + + +
Sbjct: 63  PAFEGR-------------------KEIWDALKAAAFAVEANDHELAQAIVDGASITLPH 122

Query: 122 ADLTVCYDERGAKYELPKYVLSEPTNLIRDSS 135
             LT CYDE G +Y+LP Y L+ P NLI + S
Sbjct: 123 GSLTECYDELGTRYQLPVYCLAPPVNLIMERS 135

[Close]

BLAST of Cp4.1LG01g00630 vs. TrEMBL
Match: A0A0A0KVJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G083480 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 5.0e-52
Identity = 106/134 (79.10%), Postives = 109/134 (81.34%), Query Frame = 1


Query: 1   MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNI 60
           MGC GSSQT  DGS KKIRKPK WKHPQPITRSQLTQLRDEFWDTAPHYGGR        
Sbjct: 1   MGCAGSSQTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGR-------- 60

Query: 61  FVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTVCYDERGAKYELPK 120
                      +EIWDALRAAAEAELSLAQAI+DSAGVIVQNADLT+CYDERGAKYELP 
Sbjct: 61  -----------KEIWDALRAAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPN 115

Query: 121 YVLSEPTNLIRDSS 135
           YVLSEPTNLIRDSS
Sbjct: 121 YVLSEPTNLIRDSS 115

[Close]

BLAST of Cp4.1LG01g00630 vs. TrEMBL
Match: A0A151S963_CAJCA (Ubiquitin domain-containing protein 1 OS=Cajanus cajan GN=KK1_026761 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.2e-50
Identity = 102/133 (76.69%), Postives = 110/133 (82.71%), Query Frame = 1


Query: 1   MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNI 60
           MGC GSSQ+  DG+ KKIRKPKPWKHPQPIT++QLTQLRDEFWDTAPHYGGR        
Sbjct: 1   MGCAGSSQSKPDGAVKKIRKPKPWKHPQPITKTQLTQLRDEFWDTAPHYGGR-------- 60

Query: 61  FVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTVCYDERGAKYELPK 120
                      +EIWDALRAAAEAELSLAQAI+DSAGVIVQ++DLTVCYDERGAKYELPK
Sbjct: 61  -----------KEIWDALRAAAEAELSLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPK 114

Query: 121 YVLSEPTNLIRDS 134
           YVLSEPTNLIRDS
Sbjct: 121 YVLSEPTNLIRDS 114

[Close]

BLAST of Cp4.1LG01g00630 vs. TrEMBL
Match: B9SEV6_RICCO (Ubiquitin domain-containing protein, putative OS=Ricinus communis GN=RCOM_0106280 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.1e-50
Identity = 101/131 (77.10%), Postives = 107/131 (81.68%), Query Frame = 1


Query: 1   MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNI 60
           MGCVGSS   GDG+ KKIRKPKPWKHPQPIT+SQL Q+RDEFWDTAPHYGGR        
Sbjct: 1   MGCVGSSHAKGDGTMKKIRKPKPWKHPQPITKSQLVQMRDEFWDTAPHYGGR-------- 60

Query: 61  FVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTVCYDERGAKYELPK 120
                      +EIWDALRAAAEAELSLAQAI+DSAGVIVQNADLT+CYDERGAKYELPK
Sbjct: 61  -----------KEIWDALRAAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPK 112

Query: 121 YVLSEPTNLIR 132
           YVLSEPTNLIR
Sbjct: 121 YVLSEPTNLIR 112

[Close]

BLAST of Cp4.1LG01g00630 vs. TrEMBL
Match: M5X7X0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013589mg PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 3.6e-50
Identity = 99/133 (74.44%), Postives = 110/133 (82.71%), Query Frame = 1


Query: 1   MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNI 60
           MGC GSSQT GDG+ KK+RKPKPWKHPQP+T+SQL QLR+EFWDTAPHYGGR        
Sbjct: 1   MGCAGSSQTKGDGALKKVRKPKPWKHPQPLTKSQLLQLREEFWDTAPHYGGR-------- 60

Query: 61  FVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTVCYDERGAKYELPK 120
                      +EIWDALRAAAEA+LSLAQAI+DSAGVIVQ+ADLT+CYDERGAKYELPK
Sbjct: 61  -----------KEIWDALRAAAEADLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPK 114

Query: 121 YVLSEPTNLIRDS 134
           YVLSEPTNLIR+S
Sbjct: 121 YVLSEPTNLIRES 114

[Close]

BLAST of Cp4.1LG01g00630 vs. TrEMBL
Match: A0A0S3SIM7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G149900 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 6.1e-50
Identity = 100/133 (75.19%), Postives = 110/133 (82.71%), Query Frame = 1


Query: 1   MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNI 60
           MGC GSSQ+  DG+ KKIRKPKPWKHPQPIT++QLTQLRDEFWDTAPHYGGR        
Sbjct: 1   MGCAGSSQSKPDGAVKKIRKPKPWKHPQPITKTQLTQLRDEFWDTAPHYGGR-------- 60

Query: 61  FVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTVCYDERGAKYELPK 120
                      +EIWDALRAAAEA+L+LAQAI+DSAGVIVQ++DLTVCYDERGAKYELPK
Sbjct: 61  -----------KEIWDALRAAAEADLTLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPK 114

Query: 121 YVLSEPTNLIRDS 134
           YVLSEPTNLIRDS
Sbjct: 121 YVLSEPTNLIRDS 114

[Close]

BLAST of Cp4.1LG01g00630 vs. TAIR10
Match: AT1G53400.1 (AT1G53400.1 Ubiquitin domain-containing protein)

HSP 1 Score: 190.7 bits (483), Expect = 6.0e-49
Identity = 92/129 (71.32%), Postives = 103/129 (79.84%), Query Frame = 1


Query: 1   MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNI 60
           MGC GS+Q+  DGS KKIRKPKPWKH QPIT+++L +LR+EFWDTAPHYGGR        
Sbjct: 1   MGCAGSTQSQADGSVKKIRKPKPWKHTQPITKAELMKLREEFWDTAPHYGGR-------- 60

Query: 61  FVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTVCYDERGAKYELPK 120
                      +EIWDALRAAAEA++SLAQAI+DSAGVIVQN DLTVCYDERGAKYELPK
Sbjct: 61  -----------KEIWDALRAAAEADISLAQAIVDSAGVIVQNTDLTVCYDERGAKYELPK 110

Query: 121 YVLSEPTNL 130
           YVLSEPTNL
Sbjct: 121 YVLSEPTNL 110

[Close]

BLAST of Cp4.1LG01g00630 vs. TAIR10
Match: AT5G45740.1 (AT5G45740.1 Ubiquitin domain-containing protein)

HSP 1 Score: 175.3 bits (443), Expect = 2.6e-44
Identity = 85/134 (63.43%), Postives = 101/134 (75.37%), Query Frame = 1


Query: 1   MGCVGSSQTNGDGSTK--KIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVS 60
           MGC+GSSQ   +G  K  KI KPKPW H +PITR+QLT +R+EFWDT+PHYGG+      
Sbjct: 1   MGCIGSSQARNEGGAKRKKIMKPKPWAHTEPITRAQLTNMREEFWDTSPHYGGQ------ 60

Query: 61  NIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTVCYDERGAKYEL 120
                        REIW+ALRAAAEA+L LAQ I+DSAGVIVQN DLT+C+DERGA+YEL
Sbjct: 61  -------------REIWEALRAAAEADLKLAQTIVDSAGVIVQNRDLTLCWDERGARYEL 115

Query: 121 PKYVLSEPTNLIRD 133
           P+YVLSEPTNLIR+
Sbjct: 121 PRYVLSEPTNLIRE 115

[Close]

BLAST of Cp4.1LG01g00630 vs. TAIR10
Match: AT1G16960.1 (AT1G16960.1 Ubiquitin domain-containing protein)

HSP 1 Score: 163.7 bits (413), Expect = 7.9e-41
Identity = 81/131 (61.83%), Postives = 99/131 (75.57%), Query Frame = 1


Query: 1   MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNI 60
           MGC  SS+T  +G  +KIR+PK WKHPQPI+R +LTQ+R+EFWDTAPHYGG+        
Sbjct: 1   MGC-SSSRTIAEGKKEKIRRPKTWKHPQPISRDELTQMREEFWDTAPHYGGK-------- 60

Query: 61  FVPVLKSSWFFREIWDALRAAAEAE-LSLAQAIIDSAGVIVQNADLTVCYDERGAKYELP 120
                      +EIWDALRAAAE + LSLAQ I++SAGVIVQN DLT+CYDE+G+KYELP
Sbjct: 61  -----------KEIWDALRAAAEEDDLSLAQTILESAGVIVQNTDLTICYDEKGSKYELP 111

Query: 121 KYVLSEPTNLI 131
           KYVL +P+NLI
Sbjct: 121 KYVLRDPSNLI 111

[Close]

BLAST of Cp4.1LG01g00630 vs. NCBI nr
Match: gi|449438909|ref|XP_004137230.1| (PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis sativus])

HSP 1 Score: 211.8 bits (538), Expect = 7.1e-52
Identity = 106/134 (79.10%), Postives = 109/134 (81.34%), Query Frame = 1


Query: 1   MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNI 60
           MGC GSSQT  DGS KKIRKPK WKHPQPITRSQLTQLRDEFWDTAPHYGGR        
Sbjct: 1   MGCAGSSQTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGR-------- 60

Query: 61  FVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTVCYDERGAKYELPK 120
                      +EIWDALRAAAEAELSLAQAI+DSAGVIVQNADLT+CYDERGAKYELP 
Sbjct: 61  -----------KEIWDALRAAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPN 115

Query: 121 YVLSEPTNLIRDSS 135
           YVLSEPTNLIRDSS
Sbjct: 121 YVLSEPTNLIRDSS 115

[Close]

BLAST of Cp4.1LG01g00630 vs. NCBI nr
Match: gi|1012340111|gb|KYP51332.1| (Ubiquitin domain-containing protein 1 [Cajanus cajan])

HSP 1 Score: 207.2 bits (526), Expect = 1.8e-50
Identity = 102/133 (76.69%), Postives = 110/133 (82.71%), Query Frame = 1


Query: 1   MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNI 60
           MGC GSSQ+  DG+ KKIRKPKPWKHPQPIT++QLTQLRDEFWDTAPHYGGR        
Sbjct: 1   MGCAGSSQSKPDGAVKKIRKPKPWKHPQPITKTQLTQLRDEFWDTAPHYGGR-------- 60

Query: 61  FVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTVCYDERGAKYELPK 120
                      +EIWDALRAAAEAELSLAQAI+DSAGVIVQ++DLTVCYDERGAKYELPK
Sbjct: 61  -----------KEIWDALRAAAEAELSLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPK 114

Query: 121 YVLSEPTNLIRDS 134
           YVLSEPTNLIRDS
Sbjct: 121 YVLSEPTNLIRDS 114

[Close]

BLAST of Cp4.1LG01g00630 vs. NCBI nr
Match: gi|255567086|ref|XP_002524525.1| (PREDICTED: ubiquitin domain-containing protein 1 [Ricinus communis])

HSP 1 Score: 206.5 bits (524), Expect = 3.0e-50
Identity = 101/131 (77.10%), Postives = 107/131 (81.68%), Query Frame = 1


Query: 1   MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNI 60
           MGCVGSS   GDG+ KKIRKPKPWKHPQPIT+SQL Q+RDEFWDTAPHYGGR        
Sbjct: 1   MGCVGSSHAKGDGTMKKIRKPKPWKHPQPITKSQLVQMRDEFWDTAPHYGGR-------- 60

Query: 61  FVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTVCYDERGAKYELPK 120
                      +EIWDALRAAAEAELSLAQAI+DSAGVIVQNADLT+CYDERGAKYELPK
Sbjct: 61  -----------KEIWDALRAAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPK 112

Query: 121 YVLSEPTNLIR 132
           YVLSEPTNLIR
Sbjct: 121 YVLSEPTNLIR 112

[Close]

BLAST of Cp4.1LG01g00630 vs. NCBI nr
Match: gi|659101695|ref|XP_008451743.1| (PREDICTED: ubiquitin domain-containing protein 2-like [Cucumis melo])

HSP 1 Score: 206.1 bits (523), Expect = 3.9e-50
Identity = 103/133 (77.44%), Postives = 106/133 (79.70%), Query Frame = 1


Query: 1   MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNI 60
           MGC GSS T  DGS KKIRKPK WKHPQPITRSQLTQLRDEFWDTAPHYGGR        
Sbjct: 1   MGCAGSSLTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGR-------- 60

Query: 61  FVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTVCYDERGAKYELPK 120
                      +EIWDALRAAAEAELSLAQ I+DSAGVIVQNADLT+CYDERGAKYELP 
Sbjct: 61  -----------KEIWDALRAAAEAELSLAQVIVDSAGVIVQNADLTICYDERGAKYELPN 114

Query: 121 YVLSEPTNLIRDS 134
           YVLSEPTNLIRDS
Sbjct: 121 YVLSEPTNLIRDS 114

[Close]

BLAST of Cp4.1LG01g00630 vs. NCBI nr
Match: gi|595904566|ref|XP_007213986.1| (hypothetical protein PRUPE_ppa013589mg [Prunus persica])

HSP 1 Score: 205.7 bits (522), Expect = 5.1e-50
Identity = 99/133 (74.44%), Postives = 110/133 (82.71%), Query Frame = 1


Query: 1   MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNI 60
           MGC GSSQT GDG+ KK+RKPKPWKHPQP+T+SQL QLR+EFWDTAPHYGGR        
Sbjct: 1   MGCAGSSQTKGDGALKKVRKPKPWKHPQPLTKSQLLQLREEFWDTAPHYGGR-------- 60

Query: 61  FVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTVCYDERGAKYELPK 120
                      +EIWDALRAAAEA+LSLAQAI+DSAGVIVQ+ADLT+CYDERGAKYELPK
Sbjct: 61  -----------KEIWDALRAAAEADLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPK 114

Query: 121 YVLSEPTNLIRDS 134
           YVLSEPTNLIR+S
Sbjct: 121 YVLSEPTNLIRES 114

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g00630 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UBTD1_DANRE	6.5e-21	41.61	Ubiquitin domain-containing protein 1 OS=Danio rerio GN=ubtd1 PE=2 SV=1	[more]
UBTD2_DANRE	8.5e-21	41.06	Ubiquitin domain-containing protein 2 OS=Danio rerio GN=ubtd2 PE=2 SV=1	[more]
UBTD1_XENLA	2.5e-20	41.06	Ubiquitin domain-containing protein 1 OS=Xenopus laevis GN=ubtd1 PE=2 SV=1	[more]
UBTD2_MOUSE	2.5e-20	41.06	Ubiquitin domain-containing protein 2 OS=Mus musculus GN=Ubtd2 PE=2 SV=1	[more]
UBTD1_XENTR	4.2e-20	40.13	Ubiquitin domain-containing protein 1 OS=Xenopus tropicalis GN=ubtd1 PE=2 SV=1	[more]

BLAST of Cp4.1LG01g00630 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVJ9_CUCSA	5.0e-52	79.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G083480 PE=4 SV=1	[more]
A0A151S963_CAJCA	1.2e-50	76.69	Ubiquitin domain-containing protein 1 OS=Cajanus cajan GN=KK1_026761 PE=4 SV=1	[more]
B9SEV6_RICCO	2.1e-50	77.10	Ubiquitin domain-containing protein, putative OS=Ricinus communis GN=RCOM_010628...	[more]
M5X7X0_PRUPE	3.6e-50	74.44	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013589mg PE=4 SV=1	[more]
A0A0S3SIM7_PHAAN	6.1e-50	75.19	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G149900 PE=...	[more]

BLAST of Cp4.1LG01g00630 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53400.1	6.0e-49	71.32	Ubiquitin domain-containing protein	[more]
AT5G45740.1	2.6e-44	63.43	Ubiquitin domain-containing protein	[more]
AT1G16960.1	7.9e-41	61.83	Ubiquitin domain-containing protein	[more]

BLAST of Cp4.1LG01g00630 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438909\|ref\|XP_004137230.1\|	7.1e-52	79.10	PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis sativus]	[more]
gi\|1012340111\|gb\|KYP51332.1\|	1.8e-50	76.69	Ubiquitin domain-containing protein 1 [Cajanus cajan]	[more]
gi\|255567086\|ref\|XP_002524525.1\|	3.0e-50	77.10	PREDICTED: ubiquitin domain-containing protein 1 [Ricinus communis]	[more]
gi\|659101695\|ref\|XP_008451743.1\|	3.9e-50	77.44	PREDICTED: ubiquitin domain-containing protein 2-like [Cucumis melo]	[more]
gi\|595904566\|ref\|XP_007213986.1\|	5.1e-50	74.44	hypothetical protein PRUPE_ppa013589mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0043130	ubiquitin binding

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g00630.1	Cp4.1LG01g00630.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR13609	UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED	coord: 1..52 score: 1.1E-81coord: 72..134 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g00630	Cucsa.273680	Cucumber (Gy14) v1	cgycpeB0718
Cp4.1LG01g00630	CmaCh16G004320	Cucurbita maxima (Rimu)	cmacpeB352
Cp4.1LG01g00630	CmaCh04G006650	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g00630	CmoCh16G004650	Cucurbita moschata (Rifu)	cmocpeB314
Cp4.1LG01g00630	Csa4G083480	Cucumber (Chinese Long) v2	cpecuB412
Cp4.1LG01g00630	MELO3C016122	Melon (DHL92) v3.5.1	cpemeB420
Cp4.1LG01g00630	ClCG07G010180	Watermelon (Charleston Gray)	cpewcgB407
Cp4.1LG01g00630	CSPI04G07920	Wild cucumber (PI 183967)	cpecpiB411
Cp4.1LG01g00630	Lsi07G002840	Bottle gourd (USVL1VR-Ls)	cpelsiB381
Cp4.1LG01g00630	MELO3C016122.2	Melon (DHL92) v3.6.1	cpemedB491
Cp4.1LG01g00630	CsaV3_4G008140	Cucumber (Chinese Long) v3	cpecucB0513
Cp4.1LG01g00630	Bhi01G002489	Wax gourd	cpewgoB0523
Cp4.1LG01g00630	CsGy4G007790	Cucumber (Gy14) v2	cgybcpeB516
Cp4.1LG01g00630	Carg11362	Silver-seed gourd	carcpeB0928
Cp4.1LG01g00630	Carg13089	Silver-seed gourd	carcpeB0061

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g00630	Cp4.1LG14g03530	Cucurbita pepo (Zucchini)	cpecpeB235

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g00630	Wax gourd	cpewgoB0509
Cp4.1LG01g00630	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g00630	Bottle gourd (USVL1VR-Ls)	cpelsiB372
Cp4.1LG01g00630	Watermelon (97103) v1	cpewmB413