Cp4.1LG14g02780 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG14g02780
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Descriptionembryo defective 3006
LocationCp4.1LG14 : 2696002 .. 2699999 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATCGACCCTTTATTTTGAAATATTGCATAATTCCCCCCGGCTTTCTACTCCGAAAATCTCCCGCTCGCTAACTACTTCAGATTTCTCGGACTTCGATTTCTTCCCTCACTTGCAGTTCGTCACTTCGCCGTCGCCGCCGCCGCGACTCTACGGCATTAACTGGAGTCGACTCACCGACTCGTTTCACTGGCAGCTGTTTTCTAATTTATTCCATCTGCTGCGTTGCTGTCGCGCCATTTCCGCATCGTTTGATTTCAGGCAGAATTTAGCAAGACAGGGTTGGGGATCATAGTGTATACAAGTTTTGAAAATGGATAAGAAGCACGAGATTGGTACGCCGGTGAGCTCCAGCCAGATCGATCTGAAAAAGTCATTCAAGCTTGCCGTTCGTTCTCTCCTCACTTCCTGTTCCAGGGAGGTAAGAACGAAAGTTTCTGCAATATGTATAATGTCTTGTTCATACTTTTTATGGAAATGGTGCGGAATTGGTACTTAGGAATGAGAATTAGCATTCCAACTGGCAATTTGGTCACGAGTGATTTTTTAGGCTACTTTTATTTTGAAGGAGATGGTAAAATTTCTGTAGTTGTGCTTTTTTGTTACATAATTAAGGAGTTCCGGGAATGCTTTTCGAGATTTACGACTGCGGAGCAAGAATATCTTCATCGTCTTTTCATTCAGGTACTAGTATGTTGCCTTTTTATGCTCCCCGCTACCTCTACGGAAAGCTGAGGTGAAAGCAAATTAGTATCATTTGGACGCAGTGTAATTATTTAATTTAAATTGGAGCATGTCGAGTTTATTGTAATACAGTTCTAGGACGTTTTCTTGCTTAAATCCTTCATAAGTTTCTTGCATGTGCAAATTCTGTACTGTCTTAAATGGTTAACAGCATGTTATTTGCTTTAGTTGTTCATAATTTGCATATTTTCTTATTGCTTCTTGTCTCCTTGGTCATTGGAATAATGAATTTTGGTGTTCATCGAAACTTTCAGGTTATAACTTCTTTGCATGGAAACATAGAGGTATATATTTCCATTCAAGGCTTTGCTTCAGAATCCATCCTGATAATTCCATTTCGGGAATTCTTAATTAGTAATGTGATTATGTCTCACCTTTTTCTCAACGAGGCACTTAATGACATACTATGCTTAGCTTACTGTTTTATCAGAGCTAGACACCAAGCGGTGTGCCAACGAGGATACAAGGCCCCAAGGGGGTAGAGTGTGAGATCCCACGTTAGTTGGAGAGGGAACGACGCATTTCTTATAAGGGTGTGAAAACCTCTCCCTAGTAGACGAATTTTAAAACCGTGAGGCTGAAGGTGATATGTAATGGGCTAAAACGGACAATATTTGCTAACGGTCGGCTAGCCATTCTATGTATATATACACATACAAACACATGGTAATGATAACCAAAAATTTGATTGCTTCTGGTTCTAAGTGTTAAGGGAATGGGAAGGGAAAATTTTCTAAAAAATATGTAAAAAGTGTTGAATAATTTTCTTTCGGTATAGTGCAAATTGGCTTCCTCAGCGGGATGCAAAAGCAACCCAGGCAACCACCTGAGAGAAGGTGCTTACCATAGACTAGTGCAGTCTCTGTCACCCATTGCAGTAGGCAATCACATAAGCTTGTCTCAAAATAAATCTCACAATAAGCTTCTCTCCTATTACATTGTGTGATCGTCAACAGCATTTCATTTTTAATTCTTTTTTTACATATTGCAATTTTTGGTCAATAACACTACCATTGTCTGAAATGTACAGGACGAGTTTGAGTCATTATGTGTTGAAACACAGGTAATTCTCCTGCTTCTGAGAACGAAATAATACTTTTTAAGGTATGGGCATGATTTCTTGGACAAGTTCAATATGATTACGGGGAGAACCTTCATTGAAACTATTGATATCTCAGTTTTGAAAAACTCAACTTAGTTTGAATGTATAAGATATCGGAGTCCAAACAGGCAATGGCGGGTTTCAATCAAAAAAGAAAAAGGAAAAACATGAGTGATGAGAAAGAAATAATGGAAATGGGAGTGTTGATCATGATGGTTCGCATGATAGTAAATGTTATCGACATTATGTAATGTTTCATGCTATAAAATGATTATCTTCTCCTCAATTTCCAATTTTATATGTTGGGATTTGTTTGAAGTGATGTATTGCTAGCCATTTGTGTCTGTATGCAGATAACTTTCCCTCTTAACATCGTGTCACTGTTCTGCTTGCATTATAATAGTTTTGCTTTATGCAGGTGGGACTTGTACTTGATAATGTTGAACAACTTTTGGAAGAGCAAGATCTAGACCCATTGTATTCCAAAAAGTAGGTATCTTCTGCTGCCAGGTTATTTTCTGGATCATATTTTAATGTTCTAATTAGATATAGGCTAAAAAGATATTTTTGGTCCATGAAGGTACTAACCTAGTTTTTGAACTTTAGTTTATAATAAATTAGCATATACTTTGTGACAATTTAGTTTTTAAACTTAAGTGTCAATTTCTTTTTATAATTTTATGATGGAAAGACTTTGTCTTGGTTGGTTATGAACACATTTGGTCCAAAACAAGTTAATCTATCAATATATGAAAAAATGTGATTAAATATTTACAAATTTTTTAATCACGTACTAAAATTTAGGAATTAACAAGTTAAGTTTAGGAACTAATTTTTTTAAAATCTTAAATATATTTTATAAATGAAAAATCACCTGAAACACTCGTTGATTATACAACGGTTAGAATGTTAACTAGCCTAAACCCTTCTGTTATAACATTTTTAGTGACATAGAAGTATAATTTTTTTGTTAAATTGTGACAATTCTGTTCGAGAATTTGATTGCGATGATTATTATAATTGGGAGATGGTGTGTACATTTTGCAATACATTACTTATGGCGTCGTAGGTACAATTGTAAAATTTTCTGTAAGTTTGTGGTTAAATGCCCTCGTATTCCCTTCTAGTTTTTCTTTTTTATGCAATGGGATGGGAATGGGGTTTCACAGTCGTCGGGTTTTCATAGCTTTACAGATTGAATTTCTCTTGAGTTAATAAATAACATGTAATGCAGGACAAACATAATGGAAATTGCCAATTATCTATCCATGACAAAGAAGAATGAGATCCAACACTTGAAGGACATGCTAAAAACGGTGAGCAACACTTGTAACTAATCAAACCAACTTAACTCATCTTTTCTTCATCAGTAAATCTAAATAAAGGTCTTCTCTAGGCTGAGGAACAGAACCGGCATGTTCAAGGCCGTATTGATATCCTAAGGAAAGGAGTGCAAGATGCCTCGGCCATGGAAGATGCTGTTGAAAAGGTGCAGTTTTTATTTGGTTACCTTTTTCCAACTCTTCCAAATGGATAAATAATTTAAGAATGCTGACGAAAGTAAACTTTGATTGCCTATCAAACATCAGAAAATCCAGAATGCTGACCAAACATGCTTAAACCATTGCAAAGAAATTCAAACTCACGACATAGTTTCTAACCTGTATATCTGAATTCATGCAATCTTCCACAGCTAAGAAACAGATGCAGAGCTTATGCAGATGATGGTGTTAGCAGAACGACCTTCGATACTTGACCGATGCTCCTCCGACTCGCTGTTGCCATCCCATGTGTTTACATCCAAGAATTGCTGTTAAATAACAAGGTCAGTATTTAATCTAGTACTAGATTTCACTTGGGTAGTTTTATGTGCCAGTTTCTTCAGCTTAGCTCAAGCTTTATATTTATTATTTATGTCACGTCTGCAATTTTACATGTTTTATTCTGTATAATTCATACACTCTGTATTGTAACAAAGAAATATTAAATGCCCCATCAAGCATCAGCTATGTTAGAACTCTATATGGCCCTTGTTTTTCTCCTTCACTCTCTCTCTAGAGATATCTTTGGTAGGCTTTAACATCCTCTTTGCAATGGAATTTGTACACGCAATTCATGATGAGTTGAAAATTTATGTGCAACATCTCATAAAGG

mRNA sequence

TATCGACCCTTTATTTTGAAATATTGCATAATTCCCCCCGGCTTTCTACTCCGAAAATCTCCCGCTCGCTAACTACTTCAGATTTCTCGGACTTCGATTTCTTCCCTCACTTGCAGTTCGTCACTTCGCCGTCGCCGCCGCCGCGACTCTACGGCATTAACTGGAGTCGACTCACCGACTCGTTTCACTGGCAGCTGTTTTCTAATTTATTCCATCTGCTGCGTTGCTGTCGCGCCATTTCCGCATCGTTTGATTTCAGGCAGAATTTAGCAAGACAGGGTTGGGGATCATAGTGTATACAAGTTTTGAAAATGGATAAGAAGCACGAGATTGGTACGCCGGTGAGCTCCAGCCAGATCGATCTGAAAAAGTCATTCAAGCTTGCCGTTCGTTCTCTCCTCACTTCCTGTTCCAGGGAGGAGTTCCGGGAATGCTTTTCGAGATTTACGACTGCGGAGCAAGAATATCTTCATCGTCTTTTCATTCAGGTTATAACTTCTTTGCATGGAAACATAGAGGACGAGTTTGAGTCATTATGTGTTGAAACACAGGTGGGACTTGTACTTGATAATGTTGAACAACTTTTGGAAGAGCAAGATCTAGACCCATTGTATTCCAAAAAGACAAACATAATGGAAATTGCCAATTATCTATCCATGACAAAGAAGAATGAGATCCAACACTTGAAGGACATGCTAAAAACGGCTGAGGAACAGAACCGGCATGTTCAAGGCCGTATTGATATCCTAAGGAAAGGAGTGCAAGATGCCTCGGCCATGGAAGATGCTGTTGAAAAGCTAAGAAACAGATGCAGAGCTTATGCAGATGATGGTGTTAGCAGAACGACCTTCGATACTTGACCGATGCTCCTCCGACTCGCTGTTGCCATCCCATGTGTTTACATCCAAGAATTGCTGTTAAATAACAAGGTCAGTATTTAATCTAGTACTAGATTTCACTTGGGTAGTTTTATGTGCCAGTTTCTTCAGCTTAGCTCAAGCTTTATATTTATTATTTATGTCACGTCTGCAATTTTACATGTTTTATTCTGTATAATTCATACACTCTGTATTGTAACAAAGAAATATTAAATGCCCCATCAAGCATCAGCTATGTTAGAACTCTATATGGCCCTTGTTTTTCTCCTTCACTCTCTCTCTAGAGATATCTTTGGTAGGCTTTAACATCCTCTTTGCAATGGAATTTGTACACGCAATTCATGATGAGTTGAAAATTTATGTGCAACATCTCATAAAGG

Coding sequence (CDS)

ATGGATAAGAAGCACGAGATTGGTACGCCGGTGAGCTCCAGCCAGATCGATCTGAAAAAGTCATTCAAGCTTGCCGTTCGTTCTCTCCTCACTTCCTGTTCCAGGGAGGAGTTCCGGGAATGCTTTTCGAGATTTACGACTGCGGAGCAAGAATATCTTCATCGTCTTTTCATTCAGGTTATAACTTCTTTGCATGGAAACATAGAGGACGAGTTTGAGTCATTATGTGTTGAAACACAGGTGGGACTTGTACTTGATAATGTTGAACAACTTTTGGAAGAGCAAGATCTAGACCCATTGTATTCCAAAAAGACAAACATAATGGAAATTGCCAATTATCTATCCATGACAAAGAAGAATGAGATCCAACACTTGAAGGACATGCTAAAAACGGCTGAGGAACAGAACCGGCATGTTCAAGGCCGTATTGATATCCTAAGGAAAGGAGTGCAAGATGCCTCGGCCATGGAAGATGCTGTTGAAAAGCTAAGAAACAGATGCAGAGCTTATGCAGATGATGGTGTTAGCAGAACGACCTTCGATACTTGA

Protein sequence

MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTFDT
Homology
[Close]
BLAST of Cp4.1LG14g02780 vs. TrEMBL
Match: A0A0A0KV94_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056590 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 5.9e-72
Identity = 145/165 (87.88%), Postives = 152/165 (92.12%), Query Frame = 1 

Query: 1   MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQV 60
           M +KHE+  PVSS QIDLKKSFKLAVR LLTSCSREEFRECFSRFTTAEQ+YLHRLFIQV
Sbjct: 1   MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQV 60

Query: 61  ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN 120
           ITSLHGNIEDEFESLCVETQVGLV DNVEQLLEEQDLDPLYSKKTNI+EI N+LSMTKK 
Sbjct: 61  ITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPLYSKKTNIVEIYNFLSMTKKE 120

Query: 121 EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRN 166
           EIQHLKDMLKTAEEQN  +QGRID LRKGVQDAS M DAV+KLRN
Sbjct: 121 EIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN 165

[Close]
BLAST of Cp4.1LG14g02780 vs. TrEMBL
Match: V4S9I0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012881mg PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 5.2e-44
Identity = 96/160 (60.00%), Postives = 123/160 (76.88%), Query Frame = 1 

Query: 11  VSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIED 70
           + S Q DL KSFKLA+RSLLT+CS+EEF + F RF+++EQ  LHRLF+QVITSLH NIE+
Sbjct: 9   IGSRQSDLNKSFKLAIRSLLTTCSKEEFGKAFDRFSSSEQNSLHRLFVQVITSLHENIEN 68

Query: 71  EFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLK 130
           EFESLC+ETQVG  LD VEQ +EEQ LDPL+S+KTN+M++   L+  KKNEI +L  ML+
Sbjct: 69  EFESLCLETQVGAALDTVEQFMEEQSLDPLFSEKTNVMDVVCDLTTAKKNEICYLTCMLE 128

Query: 131 TAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAY 171
             EEQNR  + R+++L+KG QD S M + VEKLR+    Y
Sbjct: 129 RVEEQNRLRKARLELLKKGRQDFSGMTEVVEKLRSGIAYY 168

[Close]
BLAST of Cp4.1LG14g02780 vs. TrEMBL
Match: V4T3P8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012881mg PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.0e-43
Identity = 95/156 (60.90%), Postives = 122/156 (78.21%), Query Frame = 1 

Query: 11  VSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIED 70
           + S Q DL KSFKLA+RSLLT+CS+EEF + F RF+++EQ  LHRLF+QVITSLH NIE+
Sbjct: 9   IGSRQSDLNKSFKLAIRSLLTTCSKEEFGKAFDRFSSSEQNSLHRLFVQVITSLHENIEN 68

Query: 71  EFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLK 130
           EFESLC+ETQVG  LD VEQ +EEQ LDPL+S+KTN+M++   L+  KKNEI +L  ML+
Sbjct: 69  EFESLCLETQVGAALDTVEQFMEEQSLDPLFSEKTNVMDVVCDLTTAKKNEICYLTCMLE 128

Query: 131 TAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNR 167
             EEQNR  + R+++L+KG QD S M + VEKL+ R
Sbjct: 129 RVEEQNRLRKARLELLKKGRQDFSGMTEVVEKLQLR 164

[Close]
BLAST of Cp4.1LG14g02780 vs. TrEMBL
Match: B9N0P7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s24350g PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 7.5e-43
Identity = 94/158 (59.49%), Postives = 124/158 (78.48%), Query Frame = 1 

Query: 6   EIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLH 65
           +IG   S  Q DL +SFKLA+RSLLTSCS++E  + FS+F+ AEQE LHRLFIQVITSLH
Sbjct: 18  KIGGGGSRRQSDLNRSFKLAIRSLLTSCSKQELAKAFSKFSNAEQESLHRLFIQVITSLH 77

Query: 66  GNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKNEIQHL 125
             +EDEFESLC+ETQVG  L+ VEQL+EEQ+LDPL+S+K+NIM+ A  LSM KKNEI +L
Sbjct: 78  KMVEDEFESLCLETQVGTALETVEQLVEEQNLDPLFSEKSNIMDAAKSLSMEKKNEIHYL 137

Query: 126 KDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKL 164
             ML+ AEEQNR ++ R+++L++ + D S +   +EK+
Sbjct: 138 MGMLEKAEEQNRRIRDRVELLKQKMPDDSGISVVMEKV 175

[Close]
BLAST of Cp4.1LG14g02780 vs. TrEMBL
Match: A0A0D2PXA4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G218800 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.3e-42
Identity = 97/172 (56.40%), Postives = 125/172 (72.67%), Query Frame = 1 

Query: 1   MDKKHEIG--TPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFI 60
           MD ++  G  T +   Q DLKKSFKLAVRSLLT+C  +EF + F +F++ EQE+LH+LFI
Sbjct: 1   MDSRNGGGPVTTIGKRQSDLKKSFKLAVRSLLTTCPTQEFSKAFPKFSSIEQEHLHQLFI 60

Query: 61  QVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTK 120
           QVITSLHGNIEDEFESLC ETQVG  LD VEQL+EEQ LDPL S +TN+M+  + LS  K
Sbjct: 61  QVITSLHGNIEDEFESLCNETQVGDALDTVEQLVEEQSLDPLSSDRTNVMDAVHNLSAAK 120

Query: 121 KNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAY 171
           K EI +L+ +L+ AEE NR +Q R+D+LR   Q+   ++D + KLR    +Y
Sbjct: 121 KAEIHYLRGLLERAEEHNRLIQARVDLLRNKTQEVPDIKDFIGKLRGGILSY 172

[Close]
BLAST of Cp4.1LG14g02780 vs. TAIR10
Match: AT4G19350.1 (AT4G19350.1 embryo defective 3006)

HSP 1 Score: 152.5 bits (384), Expect = 2.5e-37
Identity = 81/158 (51.27%), Postives = 111/158 (70.25%), Query Frame = 1 

Query: 13  SSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEF 72
           S +  LKKSFK  +R LLT+CS+++F + FS+F+ AEQE L +L+ +V+ +LH  IE+EF
Sbjct: 13  SRRTHLKKSFKSTLRHLLTACSKQDFVDIFSKFSGAEQELLFQLYTRVVVNLHQTIEEEF 72

Query: 73  ESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTA 132
           +  C ETQVG +LD VE+L+EEQ LDPL+S KT++M IA  L+ +KKNEIQ L  +L+ A
Sbjct: 73  DEQCHETQVGPILDTVEELVEEQSLDPLFSDKTDVMAIAYDLTTSKKNEIQKLTVLLQRA 132

Query: 133 EEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAY 171
           EEQNR  + RI +L+K  QD S   D +EKL      Y
Sbjct: 133 EEQNRQKEARISMLKKQTQDLSGTADRIEKLNAGVSGY 170

[Close]
BLAST of Cp4.1LG14g02780 vs. NCBI nr
Match: gi|659101941|ref|XP_008451871.1| (PREDICTED: uncharacterized protein LOC103493030 [Cucumis melo])

HSP 1 Score: 301.2 bits (770), Expect = 1.2e-78
Identity = 154/178 (86.52%), Postives = 165/178 (92.70%), Query Frame = 1 

Query: 1   MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQV 60
           M KKHEI TPV+S QIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQ+YLHRLFIQV
Sbjct: 1   MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQV 60

Query: 61  ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN 120
           ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNI+EI+N+LSM K  
Sbjct: 61  ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIVEISNFLSMKKME 120

Query: 121 EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRT 179
           EIQHLKDMLKTAEEQNR +QGRID+LRKGVQDAS M DAV+KLR+ CR+Y  DGV+ T
Sbjct: 121 EIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNET 178

[Close]
BLAST of Cp4.1LG14g02780 vs. NCBI nr
Match: gi|778691225|ref|XP_011653244.1| (PREDICTED: uncharacterized protein LOC101212745 [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 8.4e-72
Identity = 145/165 (87.88%), Postives = 152/165 (92.12%), Query Frame = 1 

Query: 1   MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQV 60
           M +KHE+  PVSS QIDLKKSFKLAVR LLTSCSREEFRECFSRFTTAEQ+YLHRLFIQV
Sbjct: 1   MGEKHELDAPVSSRQIDLKKSFKLAVRPLLTSCSREEFRECFSRFTTAEQDYLHRLFIQV 60

Query: 61  ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN 120
           ITSLHGNIEDEFESLCVETQVGLV DNVEQLLEEQDLDPLYSKKTNI+EI N+LSMTKK 
Sbjct: 61  ITSLHGNIEDEFESLCVETQVGLVFDNVEQLLEEQDLDPLYSKKTNIVEIYNFLSMTKKE 120

Query: 121 EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRN 166
           EIQHLKDMLKTAEEQN  +QGRID LRKGVQDAS M DAV+KLRN
Sbjct: 121 EIQHLKDMLKTAEEQNWVIQGRIDDLRKGVQDASGMADAVKKLRN 165

[Close]
BLAST of Cp4.1LG14g02780 vs. NCBI nr
Match: gi|359474728|ref|XP_003631523.1| (PREDICTED: uncharacterized protein LOC100854852 [Vitis vinifera])

HSP 1 Score: 187.2 bits (474), Expect = 2.6e-44
Identity = 99/164 (60.37%), Postives = 125/164 (76.22%), Query Frame = 1 

Query: 8   GTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGN 67
           G P    Q++L+KSF+LA+RSLLT+CS+EEF + F RF +AEQE LHRLFIQVITSLHGN
Sbjct: 13  GGPQGLRQMNLEKSFRLALRSLLTTCSKEEFSKAFPRFGSAEQERLHRLFIQVITSLHGN 72

Query: 68  IEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKNEIQHLKD 127
           IEDEFESLC+ETQVG  LD +EQL EEQ LDPL+S+KT   ++ + L M KKNE+Q+L  
Sbjct: 73  IEDEFESLCLETQVGTALDTIEQLSEEQSLDPLFSEKTPAGDVEHDLLMAKKNEVQYLMG 132

Query: 128 MLKTAEEQNRHVQGRIDILRKG-VQDASAMEDAVEKLRNRCRAY 171
           MLK AEEQ   +  R+++L+KG  QD SA  D +EKLR+   +Y
Sbjct: 133 MLKKAEEQKHIISARLELLKKGSQQDLSATSDVIEKLRSGILSY 176

[Close]
BLAST of Cp4.1LG14g02780 vs. NCBI nr
Match: gi|729328777|ref|XP_010535940.1| (PREDICTED: uncharacterized protein LOC104811080 [Tarenaya hassleriana])

HSP 1 Score: 186.4 bits (472), Expect = 4.4e-44
Identity = 98/170 (57.65%), Postives = 129/170 (75.88%), Query Frame = 1 

Query: 7   IGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHG 66
           +G P  S Q+DL KSFKLAVRSLLT+CS+++F + FS+F+ AEQ+ L+ L+IQVI SL+ 
Sbjct: 8   MGIP-GSRQVDLNKSFKLAVRSLLTACSKQDFVKAFSKFSGAEQDRLYGLYIQVIASLYQ 67

Query: 67  NIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKNEIQHLK 126
           NIE+EFE+LC ETQVG +LD VEQL EEQ LDPLY+ KTN+M+IA  LS  KK EIQ L 
Sbjct: 68  NIENEFEALCQETQVGAILDTVEQLAEEQSLDPLYTDKTNVMDIAKDLSTAKKQEIQQLT 127

Query: 127 DMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVS 177
           D+L+ AEE NR ++ R+++LRK  Q++S M DAVEK+++R   Y     S
Sbjct: 128 DLLQRAEEHNRLMEARVNLLRKKAQESSGMADAVEKIKSRVLGYCSSNES 176

[Close]
BLAST of Cp4.1LG14g02780 vs. NCBI nr
Match: gi|658039282|ref|XP_008355212.1| (PREDICTED: uncharacterized protein LOC103418881 [Malus domestica])

HSP 1 Score: 186.0 bits (471), Expect = 5.7e-44
Identity = 95/164 (57.93%), Postives = 126/164 (76.83%), Query Frame = 1 

Query: 11  VSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIED 70
           + + ++D+KK+FKLA+RSLLT CS++EF + F  FT AEQE+LH+LFIQVI SLHGN+ED
Sbjct: 1   MGTKELDMKKAFKLAIRSLLTPCSKQEFCQAFPNFTFAEQEHLHKLFIQVIASLHGNLED 60

Query: 71  EFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLK 130
           EF+S C+ETQVG VLD VEQL+EEQ +DPL S KTN+M++A  LS  KK+EIQ+L   L 
Sbjct: 61  EFQSACLETQVGTVLDTVEQLVEEQAMDPLSSDKTNLMDVARDLSTIKKDEIQNLTQRLG 120

Query: 131 TAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDG 175
            A+EQN H++ RI +L+K   D S +E+AVEKLR+    Y + G
Sbjct: 121 MAKEQNHHLRDRIQLLKKEXVDLSGLENAVEKLRSGSLMYGNVG 164

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g02780 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG14g02780 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KV94_CUCSA5.9e-7287.88Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056590 PE=4 SV=1[more]
V4S9I0_9ROSI5.2e-4460.00Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012881mg PE=4 SV=1[more]
V4T3P8_9ROSI2.0e-4360.90Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012881mg PE=4 SV=1[more]
B9N0P7_POPTR7.5e-4359.49Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s24350g PE=4 SV=1[more]
A0A0D2PXA4_GOSRA1.3e-4256.40Uncharacterized protein OS=Gossypium raimondii GN=B456_008G218800 PE=4 SV=1[more]
BLAST of Cp4.1LG14g02780 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G19350.12.5e-3751.27 embryo defective 3006[more]
BLAST of Cp4.1LG14g02780 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659101941|ref|XP_008451871.1|1.2e-7886.52PREDICTED: uncharacterized protein LOC103493030 [Cucumis melo][more]
gi|778691225|ref|XP_011653244.1|8.4e-7287.88PREDICTED: uncharacterized protein LOC101212745 [Cucumis sativus][more]
gi|359474728|ref|XP_003631523.1|2.6e-4460.37PREDICTED: uncharacterized protein LOC100854852 [Vitis vinifera][more]
gi|729328777|ref|XP_010535940.1|4.4e-4457.65PREDICTED: uncharacterized protein LOC104811080 [Tarenaya hassleriana][more]
gi|658039282|ref|XP_008355212.1|5.7e-4457.93PREDICTED: uncharacterized protein LOC103418881 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007128PMF1/Nnf1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0000818 nuclear MIS12/MIND complex
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g02780.1Cp4.1LG14g02780.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007128Polyamine-modulated factor 1/Kinetochore protein NNF1PFAMPF03980Nnf1coord: 54..147
score: 5.
NoneNo IPR availableunknownCoilCoilcoord: 153..173
score: -coord: 115..142
scor
NoneNo IPR availablePANTHERPTHR15459FAMILY NOT NAMEDcoord: 18..166
score: 5.7