Cp4.1LG14g01720 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG14g01720
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Lateral root primordium protein-related, putative
Location	Cp4.1LG14 : 3454778 .. 3456147 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGATAGAAAGAGGAAGAGAGAGAAAGAAGAGAGAGAAAAGGGGTAATCAATCATCTCTGCAACAAAATCAGAACATACGAAGAAGAAAGCGTTTTGTTCTTTATTTAAGTTAGCGCCACCGTTCCCCATGGCGGCGTTGCAGGTTCCATTTTTACACACACACACACAATCTGATTCCCAATTTTTTAATTCATACCCTTTTCTCCGCCCCCTGCCTTCCGATCGCCGTTCGGAGGCTGTCTGTTTTTTCTTTTTTTTTTTTTTTCTGATATGGATTTTAATTCAAAATTAGGCGTAATCTCTCCGGTGGAATTATGGCCGGTTTTTTCCCACTAGGCGGCGGCGGCGGCGGTAGCAGCGGCGGTGAGATTATTCATCCAACCGACGGATTACTTTGGTACAAGAATTATGAGAGCTTCGAAACAGAACAACAGCAACAAGGTGGAGAAGGGTTTGTTTACTCCGGCGAAAATTCGCCGGCGAGATCGTCGTTGGTGATGGTGAGATCCGGCGGAGAAGGCGGAGGGAAGGTTATTAGCTGCCAAGATTGTGGGAATCAAGCGAAAAAAGATTGCGTTCATATGCGATGTAGAACTTGTTGTAAAAGCCGTGGGTTTTTGTGTGAAACCCATGTTAAAAGTACTTGGGTACCCGCTTCCAAACGCCGTGAGCGGCTGATCCGTACTACCGGCGGTGACTCCAAACGCCCTAGAGACACCCACGCCGCTTCTTCCGGTACGATTAATTTCTTATTTTTAATTCAATTTTAGTTTTTGAACAAAACCCACATCGATTTTGTTCATGATTTACAGAATCAAATTTTTTTTTTTTTTGGTTTTAGGGTTTGAAATAGGGAATTTCCCGCCGGAAGTAAACTCCACGGCGGTGTTCCGATGCGTACGGATGACAACATTAGACGAACCCACCGGCACCGATCAATATGCTTATCAAACCGCCGTCAACATCGGTGGCCATATCTTCAAGGGCATTCTCTACGACCACGGCCCTGATCAACAACAACCACCCATCTCCGCCTCCCCGGATGGCGGAGCCCTCCTCATCACCACCGCCGAGTCCGCCGCACTGCTGGATCCTCCGCCGTCATACCCAGCTCCACTGACCAGCTACATCCCAGCCGGTACGCAATTTTTTCAACCCCCGACATCTTAGCCGACGGTTTTCCGTTAGGGCATTGTGATTAAAAGAGAAATAGTGGAAATTGCAGGCAAAGTATATAATTTTTCATGAATAAATTTAAAAAAAAAAATGTAATTTTTATTTTATTTTTTGCATTAATTCGCCGCCATTGTCGGAACTTGGTGTCCTGCTTCCCCGTACGGTCGCCGGCGTTCGAATTGCTCTTCATTT

mRNA sequence

TAAGATAGAAAGAGGAAGAGAGAGAAAGAAGAGAGAGAAAAGGGGTAATCAATCATCTCTGCAACAAAATCAGAACATACGAAGAAGAAAGCGTTTTGTTCTTTATTTAAGTTAGCGCCACCGTTCCCCATGGCGGCGTTGCAGGCGTAATCTCTCCGGTGGAATTATGGCCGGTTTTTTCCCACTAGGCGGCGGCGGCGGCGGTAGCAGCGGCGGTGAGATTATTCATCCAACCGACGGATTACTTTGGTACAAGAATTATGAGAGCTTCGAAACAGAACAACAGCAACAAGGTGGAGAAGGGTTTGTTTACTCCGGCGAAAATTCGCCGGCGAGATCGTCGTTGGTGATGGTGAGATCCGGCGGAGAAGGCGGAGGGAAGGTTATTAGCTGCCAAGATTGTGGGAATCAAGCGAAAAAAGATTGCGTTCATATGCGATGTAGAACTTGTTGTAAAAGCCGTGGGTTTTTGTGTGAAACCCATGTTAAAAGTACTTGGGTACCCGCTTCCAAACGCCGTGAGCGGCTGATCCGTACTACCGGCGGTGACTCCAAACGCCCTAGAGACACCCACGCCGCTTCTTCCGGGTTTGAAATAGGGAATTTCCCGCCGGAAGTAAACTCCACGGCGGTGTTCCGATGCGTACGGATGACAACATTAGACGAACCCACCGGCACCGATCAATATGCTTATCAAACCGCCGTCAACATCGGTGGCCATATCTTCAAGGGCATTCTCTACGACCACGGCCCTGATCAACAACAACCACCCATCTCCGCCTCCCCGGATGGCGGAGCCCTCCTCATCACCACCGCCGAGTCCGCCGCACTGCTGGATCCTCCGCCGTCATACCCAGCTCCACTGACCAGCTACATCCCAGCCGGTACGCAATTTTTTCAACCCCCGACATCTTAGCCGACGGTTTTCCGTTAGGGCATTGTGATTAAAAGAGAAATAGTGGAAATTGCAGGCAAAGTATATAATTTTTCATGAATAAATTTAAAAAAAAAAATGTAATTTTTATTTTATTTTTTGCATTAATTCGCCGCCATTGTCGGAACTTGGTGTCCTGCTTCCCCGTACGGTCGCCGGCGTTCGAATTGCTCTTCATTT

Coding sequence (CDS)

ATGGCCGGTTTTTTCCCACTAGGCGGCGGCGGCGGCGGTAGCAGCGGCGGTGAGATTATTCATCCAACCGACGGATTACTTTGGTACAAGAATTATGAGAGCTTCGAAACAGAACAACAGCAACAAGGTGGAGAAGGGTTTGTTTACTCCGGCGAAAATTCGCCGGCGAGATCGTCGTTGGTGATGGTGAGATCCGGCGGAGAAGGCGGAGGGAAGGTTATTAGCTGCCAAGATTGTGGGAATCAAGCGAAAAAAGATTGCGTTCATATGCGATGTAGAACTTGTTGTAAAAGCCGTGGGTTTTTGTGTGAAACCCATGTTAAAAGTACTTGGGTACCCGCTTCCAAACGCCGTGAGCGGCTGATCCGTACTACCGGCGGTGACTCCAAACGCCCTAGAGACACCCACGCCGCTTCTTCCGGGTTTGAAATAGGGAATTTCCCGCCGGAAGTAAACTCCACGGCGGTGTTCCGATGCGTACGGATGACAACATTAGACGAACCCACCGGCACCGATCAATATGCTTATCAAACCGCCGTCAACATCGGTGGCCATATCTTCAAGGGCATTCTCTACGACCACGGCCCTGATCAACAACAACCACCCATCTCCGCCTCCCCGGATGGCGGAGCCCTCCTCATCACCACCGCCGAGTCCGCCGCACTGCTGGATCCTCCGCCGTCATACCCAGCTCCACTGACCAGCTACATCCCAGCCGGTACGCAATTTTTTCAACCCCCGACATCTTAG

Protein sequence

MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGGEGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTTGGDSKRPRDTHAASSGFEIGNFPPEVNSTAVFRCVRMTTLDEPTGTDQYAYQTAVNIGGHIFKGILYDHGPDQQQPPISASPDGGALLITTAESAALLDPPPSYPAPLTSYIPAGTQFFQPPTS

Homology

[Close]

BLAST of Cp4.1LG14g01720 vs. Swiss-Prot
Match: SRS1_ARATH (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=SRS1 PE=1 SV=2)

HSP 1 Score: 191.0 bits (484), Expect = 1.5e-47
Identity = 121/264 (45.83%), Postives = 154/264 (58.33%), Query Frame = 1


Query: 47  FVYSGENSPA----RSSLVMVRSGGEGGGKV-ISCQDCGNQAKKDCVHMRCRTCCKSRGF 106
           F  SGE S A     ++++M+RSGG GGG   +SCQDCGNQAKKDC HMRCRTCCKSRGF
Sbjct: 110 FDISGETSTAGAGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGF 169

Query: 107 LCETHVKSTWVPASKRRER---------LIRTTGGDS--KRPRDTHAAS----------- 166
            C THV+STWVPA+KRRER           +   G+S  KR R+   A+           
Sbjct: 170 ECSTHVRSTWVPAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPS 229

Query: 167 -SGFEIGNFPPEVNSTAVFRCVRMTTLDEPTGTDQYAYQTAVNIGGHIFKGILYDHGPDQ 226
            SG E+GNFP EV+S+AVFRCVR++++++  G +++AYQTAV+IGGHIFKGILYD GP  
Sbjct: 230 HSGLEVGNFPAEVSSSAVFRCVRVSSVED--GEEEFAYQTAVSIGGHIFKGILYDLGPGS 289

Query: 227 Q--------QPPISASPDGGA----------LLITTAES---------------AALLDP 250
                        S+S  GGA          + + TA S               A  +DP
Sbjct: 290 SGGGGYNVVAAGESSSGGGGAQQLNLITAGSVTVATASSSTPNLGGIGSSSAAAATYIDP 349

[Close]

BLAST of Cp4.1LG14g01720 vs. Swiss-Prot
Match: SRS5_ARATH (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=SRS5 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.9e-45
Identity = 135/347 (38.90%), Postives = 164/347 (47.26%), Query Frame = 1


Query: 1   MAGFFPLGGGGGGSSGG-------------------------EIIHPTDGL-LWYKNYES 60
           MAGFF LGG    S+                           EI +   G  +W   Y  
Sbjct: 1   MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLYKDEIYNNNKGFEIWPPQYFQ 60

Query: 61  FETEQQQQGGE------------GFVYSGE-----NSPARSSLVMVRSGGEGGGKVIS-- 120
            +  QQQQ  +            G V SG      N+ +RS    V S  E GG  ++  
Sbjct: 61  QQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFTVTRQ 120

Query: 121 ----CQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIR-------- 180
               CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+KRRERL +        
Sbjct: 121 GGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHHS 180

Query: 181 --------------TTGGDSKRPRDTHA---------------ASSGFEIG-NFPPEVNS 240
                          +GGD+   +D                  ++SG E+  + PPEVNS
Sbjct: 181 ASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLPPEVNS 240

Query: 241 TAVFRCVRMTTLDEPTGTDQYAYQTAVNIGGHIFKGILYDHGPDQQQPPISASPDGGALL 250
            A+FRCVR+++++E      YAYQTAVNIGGHIFKGILYD GP+ Q           A  
Sbjct: 241 PAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHLNLLASTATT 300

[Close]

BLAST of Cp4.1LG14g01720 vs. Swiss-Prot
Match: SHI_ARATH (Protein SHORT INTERNODES OS=Arabidopsis thaliana GN=SHI PE=1 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.2e-44
Identity = 130/336 (38.69%), Postives = 170/336 (50.60%), Query Frame = 1


Query: 1   MAGFFPLGGGGGGSS--------GGEIIHPTDGLLWYKNYES------------------ 60
           MAGFF LG GGGG++               T+  LW +N  S                  
Sbjct: 1   MAGFFSLGHGGGGNTPDNHRTNTNNPSSSGTESWLWCRNPNSNADGGEAGPSYKGTLELW 60

Query: 61  ---------FETEQQQQ---------GGEGFVYSGEN--SPARSSLVMVRSGGEGGGKVI 120
                    F+ +QQQQ          G G   S  +    +  +L+M+RSG   GG   
Sbjct: 61  QHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGGP-- 120

Query: 121 SCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTTGGDS----- 180
           SCQDCGNQ+KKDC HMRCRTCCKSRG  C THVKSTWVPA+KRRER  + + G       
Sbjct: 121 SCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQLG 180

Query: 181 ----KRPRDTHAA--------------SSGFEIGNFPPEVNSTAVFRCVRMTTLDEPTGT 240
               KR R+   A              +SG E+GNFPPEV+S+AVFRCVR++++D+    
Sbjct: 181 GSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDE--E 240

Query: 241 DQYAYQTAVNIGGHIFKGILYDHGPDQQQPPISASPDGGAL---LITTAESAALLDPPPS 245
           ++YAY+TAV+IGGH+FKG+LYD GP ++     +S  GG+    LIT   SA+   P  S
Sbjct: 241 EEYAYKTAVSIGGHVFKGVLYDQGPAER-----SSSGGGSQPLNLITAGPSASSSSPNVS 300

[Close]

BLAST of Cp4.1LG14g01720 vs. Swiss-Prot
Match: SRS7_ARATH (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=SRS7 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 6.8e-40
Identity = 102/251 (40.64%), Postives = 134/251 (53.39%), Query Frame = 1


Query: 52  ENSPARSS---LVMVRSGGEGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVK 111
           ++ P RSS     + R G       ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVK
Sbjct: 98  DHEPVRSSTGGFTVTRQGN------MNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVK 157

Query: 112 STWVPASKRRERLIRTTGGDSKRPRDT--------------------------------- 171
           STWV A+KRRER  +     +KR RD                                  
Sbjct: 158 STWVSAAKRRERQAQLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVV 217

Query: 172 HAASSGFEIGNFPPEVNSTAVFRCVRMTTLDEPTGTDQYAYQTAVNIGGHIFKGILYDHG 231
           +A+SSG E  + PPE++S AVFRC+R++++D+    ++YAYQTAV+IGGH+FKGILYD G
Sbjct: 218 NASSSGLETSHLPPEISSPAVFRCMRVSSIDDE--DEEYAYQTAVSIGGHVFKGILYDQG 277

Query: 232 PDQQQPPISASPDGGAL------LITTAESAAL-------------LDPPPSYPA---PL 245
           P       S+S +G         L+ +  SAA              +DP   Y A   P 
Sbjct: 278 PSSDHHRYSSSLNGETSHQHHLNLMDSTPSAATTNAVTAVNTNNGSIDPSSLYTAVATPF 337

[Close]

BLAST of Cp4.1LG14g01720 vs. Swiss-Prot
Match: SRS2_ARATH (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=SRS2 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.2e-36
Identity = 117/326 (35.89%), Postives = 153/326 (46.93%), Query Frame = 1


Query: 1   MAGFFPLGGGGGGSSGGEIIHPTD---GLLWYK---NYESFETEQQQQ----GGEGFVYS 60
           MAG F LGG    +   E  +        +WY+   N  +      QQ      E  +  
Sbjct: 1   MAGIFSLGGNNNNNGDEEEENQQQQKTNWVWYRSNANTNNINPSSSQQVWQIPPEQMLMH 60

Query: 61  GENSPARSSLVMVRS--------GGEGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFL 120
             + P + SL +                   ISC+DCGNQAKKDC HMRCRTCCKSRGF 
Sbjct: 61  HHSHPQQQSLDLYPGHQIDVSDLATSSRSITISCRDCGNQAKKDCTHMRCRTCCKSRGFD 120

Query: 121 CETHVKSTWVPASKRRERL----IRTTGGDS---------------KRPRD--------- 180
           C THV+STW+P ++RRER     + T+GG                 KR RD         
Sbjct: 121 CSTHVRSTWIPVARRRERQQQLHMSTSGGGGGSGSGGAGGGGSSIPKRHRDPTLPGTSSS 180

Query: 181 --THAASSGFEIG--NFPPEVNSTAVFRCVRMTTLDEPTGTDQYAYQTAVNIGGHIFKGI 240
               + S+G E+G  +FP EV+S A+FRCV+M+ +D+  G  QYAYQT VNIGGH+FKGI
Sbjct: 181 SRLPSHSAGLEMGEASFPGEVSSDALFRCVKMSGVDD-GGDGQYAYQTTVNIGGHLFKGI 240

Query: 241 LYDHGPDQQ-------------------------QPPISASPDGGALLITTAESAALLDP 248
           LYD GP+                            PP+     GG        SA  +DP
Sbjct: 241 LYDQGPESSYMSGGSGGSDHQSSSAGGGGGGHPFNPPVVTDGGGG------VSSAMFVDP 300

[Close]

BLAST of Cp4.1LG14g01720 vs. TrEMBL
Match: A0A0A0KUG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G043960 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 2.2e-90
Identity = 187/277 (67.51%), Postives = 205/277 (74.01%), Query Frame = 1


Query: 1   MAGFFPLGGGGGG-----------SSGGEIIHPT-DGLLWYKNYESFET----EQQQQ-- 60
           MAGFFPL GGG G           ++GGEIIHPT +GL WYKNYE  ET    EQQQQ  
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQ 60

Query: 61  -----GGEGFVYSGENSPARSSLVMVRSG---GEGGGKVISCQDCGNQAKKDCVHMRCRT 120
                GGEGFVYSG+ SPARSSLVMVRSG   G GGG V SCQDCGNQAKKDCVHMRCRT
Sbjct: 61  PAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCRT 120

Query: 121 CCKSRGFLCETHVKSTWVPASKRRERLIRTTGGDSKRPRDT--HAASSGFEIGNFPPEVN 180
           CCKSRGF CETHVKSTWVPASKRR+R +R+ G +SKRP+DT  H  SSG ++GNFP EV 
Sbjct: 121 CCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVT 180

Query: 181 STAVFRCVRMTTLDEPTGTDQYAYQTAVNIGGHIFKGILYDHGPDQQQPPISASPDGGAL 240
           + AVFRCVRMT+LDE    DQYAYQTAVNIGG IFKGILYDHGP+Q  PP S+S      
Sbjct: 181 TPAVFRCVRMTSLDET--DDQYAYQTAVNIGGRIFKGILYDHGPEQPPPPPSSS------ 240

Query: 241 LITTAESAALLDPPPSYPAPLTSYIPAGTQFFQPPTS 250
                 SAALLDP P YP PL++YI AGTQFF PP+S
Sbjct: 241 ------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS 263

[Close]

BLAST of Cp4.1LG14g01720 vs. TrEMBL
Match: A0A0A0KGL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G504650 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.8e-55
Identity = 153/335 (45.67%), Postives = 180/335 (53.73%), Query Frame = 1


Query: 1   MAGFFPLGGGGGG-------SSGGEIIHPT--DGLLWYK--NYESFETEQQQQGGEGF-- 60
           M+GFF LGGGGGG       +   + IHP     L WYK  N E ++ +QQQQ       
Sbjct: 1   MSGFFTLGGGGGGRDEEQNNNRPNQFIHPPPDSSLFWYKAGNVELWQQQQQQQHHHHHQE 60

Query: 61  ----------------------VYSGENSPARSSLVMVRSGGEGGGKVISCQDCGNQAKK 120
                                 V + + S +RS   M+ S G GGG  ISCQDCGNQAKK
Sbjct: 61  QPLFQTQSRTTTTTTPYSAPLAVRNSDESSSRSGNFMMISSGSGGGG-ISCQDCGNQAKK 120

Query: 121 DCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRER-----------------LIRTTGGD 180
           DC HMRCRTCCKSRGF CETHVKSTWVPA+KRRER                  ++  GGD
Sbjct: 121 DCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHHHHHQQQLQLHGGD 180

Query: 181 S--KRPRDTHAAS------------SGFEIGNFPPEVNSTAVFRCVRMTTLDEPTGTDQY 240
           +  KR RD +++S            SG EIGNFP E+NS AVFRCVR+++ D+    DQY
Sbjct: 181 NNPKRHRDYNSSSLACTLIPTNNNTSGLEIGNFPAELNSPAVFRCVRVSSADDT--DDQY 240

Query: 241 AYQTAVNIGGHIFKGILYDHGPDQQQ-PPISASPDG--------------GALLITTAES 250
           AYQTAVNIGGH+FKGILYD GP+    PP   S  G              GA   TT   
Sbjct: 241 AYQTAVNIGGHVFKGILYDQGPENNYIPPGETSSGGGGSSSGVQPLNFIAGAADATTGSG 300

[Close]

BLAST of Cp4.1LG14g01720 vs. TrEMBL
Match: B9T5Y4_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_0415480 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 8.4e-53
Identity = 150/355 (42.25%), Postives = 179/355 (50.42%), Query Frame = 1


Query: 1   MAGFFPLGGGGGGSSGGEIIH-------------PTDGLLWYKN----YESFET--EQQQ 60
           MAG F LGGGGG  S  E                P +   WYKN    Y+ FE   +QQQ
Sbjct: 1   MAGLFSLGGGGGRGSNQEDDQQHNNNPPPPPTEIPQESWFWYKNEDVPYKGFELWQQQQQ 60

Query: 61  QGGEGF-----------VYSG----------------ENSPARSSLVMVRSGGEGGGKVI 120
           Q  E F           +YS                 + S +RS+ +M+RS    GG  +
Sbjct: 61  QQQEFFRHQSLQQQQQDLYSSAAGLGVGPSRSSINFSDESSSRSAFMMMRSSS--GGSSM 120

Query: 121 SCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTTG-------- 180
           SCQDCGNQAKKDCVHMRCRTCCKSRGF C+THVKSTWVPASKRRER  +           
Sbjct: 121 SCQDCGNQAKKDCVHMRCRTCCKSRGFDCQTHVKSTWVPASKRRERQQQLVAIQQQQHQQ 180

Query: 181 --------GDSKRPRDTHAA----------------SSGFEIGNFPPEVNSTAVFRCVRM 240
                    + KR R+   +                SSG E+GNFP EV+S AVFRCV++
Sbjct: 181 QQQQQQQQQNPKRLRENPTSSSLACTPATNTRLPNNSSGLELGNFPSEVSSPAVFRCVKV 240

Query: 241 TTLDEPTGTDQYAYQTAVNIGGHIFKGILYDHGPDQQQPPISASPDGGAL--------LI 250
           + +DE    DQYAYQTAVNIGGH+FKGILYDHGP+    P + +  GG          LI
Sbjct: 241 SGIDE--NDDQYAYQTAVNIGGHVFKGILYDHGPESTYMPAAETSSGGGSGGGLQPLNLI 300

[Close]

BLAST of Cp4.1LG14g01720 vs. TrEMBL
Match: U5G8I9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s13610g PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 4.1e-52
Identity = 146/332 (43.98%), Postives = 179/332 (53.92%), Query Frame = 1


Query: 1   MAGFFPLGGGGGGSSGGEIIH---------PTDGLLWYKN----YESFETEQQQ------ 60
           MAG F LG G   S+  E            P +   WYK+    Y+SFE  QQQ      
Sbjct: 1   MAGLFSLGRGSSSSNNQEDQQNNNNPPTEIPQESWFWYKSEDIPYKSFELWQQQHQELLH 60

Query: 61  ---QGGEGFVYS----------------GENSPARSS-----LVMVRSGGEGGGKV--IS 120
              Q  +  +YS                 + S +RS+      +M+R GG G G    IS
Sbjct: 61  QRHQNPQQDLYSPAVGLGVGPSRTSINISDESSSRSAAAAEAFMMMRPGGSGTGGAGSIS 120

Query: 121 CQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRER-----------LIRT 180
           CQDCGNQAKKDC+HMRCRTCCKSRGF C+THVKSTWVPASKRRER            ++ 
Sbjct: 121 CQDCGNQAKKDCIHMRCRTCCKSRGFECQTHVKSTWVPASKRRERQQQLNLLQQQQQLQI 180

Query: 181 TGGDSKRPRDTHAAS----------SGFEIGNFPPEVNSTAVFRCVRMTTLDEPTGTDQY 240
            G + KR R+  ++S          SG E+GNFP EV+S A+FRCVR++ +DE    +  
Sbjct: 181 RGENPKRQRENPSSSLACTRLANSMSGLELGNFPSEVSSPALFRCVRVSGIDE--SEEML 240

Query: 241 AYQTAVNIGGHIFKGILYDHGPDQQ-QPPISASPDGGAL----LIT------------TA 250
           AYQTAVNIGGH+FKGILYDHGPD     P   S  GG +    LIT             +
Sbjct: 241 AYQTAVNIGGHVFKGILYDHGPDSNYMAPGETSSGGGGVQPLNLITAGTATGGGGVTVAS 300

[Close]

BLAST of Cp4.1LG14g01720 vs. TrEMBL
Match: A0A067K8V2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13664 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-51
Identity = 145/353 (41.08%), Postives = 179/353 (50.71%), Query Frame = 1


Query: 1   MAGFFPLGGGGGGSSGG-------------EIIHPTDGLLWYKNYE------SFETEQQQ 60
           MAG F LGGGGGG   G             EI  P +   WYKN +      +FE  QQQ
Sbjct: 1   MAGLFSLGGGGGGGGRGSNQDDQHNNNPPTEI--PQESWFWYKNEDIPYKGTTFELWQQQ 60

Query: 61  Q--------------------GGEGF------VYSGENSPARSSLVMVRS-----GGEGG 120
           +                     G G       +   + S +RS+ +M+RS     GG GG
Sbjct: 61  EFLHHRHHQHHHQNQDLYSSAAGLGVGPSRSSINVSDESSSRSAFMMMRSVSGAGGGSGG 120

Query: 121 GKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRER---------- 180
              +SCQDCGNQAKKDC+HMRCRTCCKSRGF C+THVKSTWVPASKRRER          
Sbjct: 121 AGGMSCQDCGNQAKKDCMHMRCRTCCKSRGFDCQTHVKSTWVPASKRRERQQLAALQQQQ 180

Query: 181 -LIRTTGGDS-KRPRDTHAASS------------GFEIGNFPPEVNSTAVFRCVRMTTLD 240
             ++  G  + KR R+   +SS            G ++GNFP EV+S A FRCVR++ +D
Sbjct: 181 QQLQLRGDQNPKRHRENPTSSSLACTRLPSNNTTGLDVGNFPAEVSSPATFRCVRVSGID 240

Query: 241 EPTGTDQYAYQTAVNIGGHIFKGILYDHGPDQQQPP------------------------ 250
           E    DQYAYQTAVNIGGH+FKGILYDHG +    P                        
Sbjct: 241 E--NDDQYAYQTAVNIGGHVFKGILYDHGSESSYIPAGESSSGGGSVGVQPLNLITAGTV 300

[Close]

BLAST of Cp4.1LG14g01720 vs. TAIR10
Match: AT3G51060.1 (AT3G51060.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 191.0 bits (484), Expect = 8.5e-49
Identity = 121/264 (45.83%), Postives = 154/264 (58.33%), Query Frame = 1


Query: 47  FVYSGENSPA----RSSLVMVRSGGEGGGKV-ISCQDCGNQAKKDCVHMRCRTCCKSRGF 106
           F  SGE S A     ++++M+RSGG GGG   +SCQDCGNQAKKDC HMRCRTCCKSRGF
Sbjct: 110 FDISGETSTAGAGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGF 169

Query: 107 LCETHVKSTWVPASKRRER---------LIRTTGGDS--KRPRDTHAAS----------- 166
            C THV+STWVPA+KRRER           +   G+S  KR R+   A+           
Sbjct: 170 ECSTHVRSTWVPAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPS 229

Query: 167 -SGFEIGNFPPEVNSTAVFRCVRMTTLDEPTGTDQYAYQTAVNIGGHIFKGILYDHGPDQ 226
            SG E+GNFP EV+S+AVFRCVR++++++  G +++AYQTAV+IGGHIFKGILYD GP  
Sbjct: 230 HSGLEVGNFPAEVSSSAVFRCVRVSSVED--GEEEFAYQTAVSIGGHIFKGILYDLGPGS 289

Query: 227 Q--------QPPISASPDGGA----------LLITTAES---------------AALLDP 250
                        S+S  GGA          + + TA S               A  +DP
Sbjct: 290 SGGGGYNVVAAGESSSGGGGAQQLNLITAGSVTVATASSSTPNLGGIGSSSAAAATYIDP 349

[Close]

BLAST of Cp4.1LG14g01720 vs. TAIR10
Match: AT1G75520.1 (AT1G75520.1 SHI-related sequence 5)

HSP 1 Score: 184.1 bits (466), Expect = 1.0e-46
Identity = 135/347 (38.90%), Postives = 164/347 (47.26%), Query Frame = 1


Query: 1   MAGFFPLGGGGGGSSGG-------------------------EIIHPTDGL-LWYKNYES 60
           MAGFF LGG    S+                           EI +   G  +W   Y  
Sbjct: 1   MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLYKDEIYNNNKGFEIWPPQYFQ 60

Query: 61  FETEQQQQGGE------------GFVYSGE-----NSPARSSLVMVRSGGEGGGKVIS-- 120
            +  QQQQ  +            G V SG      N+ +RS    V S  E GG  ++  
Sbjct: 61  QQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFTVTRQ 120

Query: 121 ----CQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIR-------- 180
               CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+KRRERL +        
Sbjct: 121 GGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHHS 180

Query: 181 --------------TTGGDSKRPRDTHA---------------ASSGFEIG-NFPPEVNS 240
                          +GGD+   +D                  ++SG E+  + PPEVNS
Sbjct: 181 ASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLPPEVNS 240

Query: 241 TAVFRCVRMTTLDEPTGTDQYAYQTAVNIGGHIFKGILYDHGPDQQQPPISASPDGGALL 250
            A+FRCVR+++++E      YAYQTAVNIGGHIFKGILYD GP+ Q           A  
Sbjct: 241 PAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHLNLLASTATT 300

[Close]

BLAST of Cp4.1LG14g01720 vs. TAIR10
Match: AT5G66350.1 (AT5G66350.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 181.4 bits (459), Expect = 6.8e-46
Identity = 130/336 (38.69%), Postives = 170/336 (50.60%), Query Frame = 1


Query: 1   MAGFFPLGGGGGGSS--------GGEIIHPTDGLLWYKNYES------------------ 60
           MAGFF LG GGGG++               T+  LW +N  S                  
Sbjct: 1   MAGFFSLGHGGGGNTPDNHRTNTNNPSSSGTESWLWCRNPNSNADGGEAGPSYKGTLELW 60

Query: 61  ---------FETEQQQQ---------GGEGFVYSGEN--SPARSSLVMVRSGGEGGGKVI 120
                    F+ +QQQQ          G G   S  +    +  +L+M+RSG   GG   
Sbjct: 61  QHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGGP-- 120

Query: 121 SCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTTGGDS----- 180
           SCQDCGNQ+KKDC HMRCRTCCKSRG  C THVKSTWVPA+KRRER  + + G       
Sbjct: 121 SCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQLG 180

Query: 181 ----KRPRDTHAA--------------SSGFEIGNFPPEVNSTAVFRCVRMTTLDEPTGT 240
               KR R+   A              +SG E+GNFPPEV+S+AVFRCVR++++D+    
Sbjct: 181 GSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDE--E 240

Query: 241 DQYAYQTAVNIGGHIFKGILYDHGPDQQQPPISASPDGGAL---LITTAESAALLDPPPS 245
           ++YAY+TAV+IGGH+FKG+LYD GP ++     +S  GG+    LIT   SA+   P  S
Sbjct: 241 EEYAYKTAVSIGGHVFKGVLYDQGPAER-----SSSGGGSQPLNLITAGPSASSSSPNVS 300

[Close]

BLAST of Cp4.1LG14g01720 vs. TAIR10
Match: AT1G19790.1 (AT1G19790.1 SHI-related sequence 7)

HSP 1 Score: 165.6 bits (418), Expect = 3.8e-41
Identity = 102/251 (40.64%), Postives = 134/251 (53.39%), Query Frame = 1


Query: 52  ENSPARSS---LVMVRSGGEGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVK 111
           ++ P RSS     + R G       ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVK
Sbjct: 98  DHEPVRSSTGGFTVTRQGN------MNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVK 157

Query: 112 STWVPASKRRERLIRTTGGDSKRPRDT--------------------------------- 171
           STWV A+KRRER  +     +KR RD                                  
Sbjct: 158 STWVSAAKRRERQAQLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVV 217

Query: 172 HAASSGFEIGNFPPEVNSTAVFRCVRMTTLDEPTGTDQYAYQTAVNIGGHIFKGILYDHG 231
           +A+SSG E  + PPE++S AVFRC+R++++D+    ++YAYQTAV+IGGH+FKGILYD G
Sbjct: 218 NASSSGLETSHLPPEISSPAVFRCMRVSSIDDE--DEEYAYQTAVSIGGHVFKGILYDQG 277

Query: 232 PDQQQPPISASPDGGAL------LITTAESAAL-------------LDPPPSYPA---PL 245
           P       S+S +G         L+ +  SAA              +DP   Y A   P 
Sbjct: 278 PSSDHHRYSSSLNGETSHQHHLNLMDSTPSAATTNAVTAVNTNNGSIDPSSLYTAVATPF 337

[Close]

BLAST of Cp4.1LG14g01720 vs. TAIR10
Match: AT4G36260.1 (AT4G36260.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 154.8 bits (390), Expect = 6.8e-38
Identity = 117/326 (35.89%), Postives = 153/326 (46.93%), Query Frame = 1


Query: 1   MAGFFPLGGGGGGSSGGEIIHPTD---GLLWYK---NYESFETEQQQQ----GGEGFVYS 60
           MAG F LGG    +   E  +        +WY+   N  +      QQ      E  +  
Sbjct: 1   MAGIFSLGGNNNNNGDEEEENQQQQKTNWVWYRSNANTNNINPSSSQQVWQIPPEQMLMH 60

Query: 61  GENSPARSSLVMVRS--------GGEGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFL 120
             + P + SL +                   ISC+DCGNQAKKDC HMRCRTCCKSRGF 
Sbjct: 61  HHSHPQQQSLDLYPGHQIDVSDLATSSRSITISCRDCGNQAKKDCTHMRCRTCCKSRGFD 120

Query: 121 CETHVKSTWVPASKRRERL----IRTTGGDS---------------KRPRD--------- 180
           C THV+STW+P ++RRER     + T+GG                 KR RD         
Sbjct: 121 CSTHVRSTWIPVARRRERQQQLHMSTSGGGGGSGSGGAGGGGSSIPKRHRDPTLPGTSSS 180

Query: 181 --THAASSGFEIG--NFPPEVNSTAVFRCVRMTTLDEPTGTDQYAYQTAVNIGGHIFKGI 240
               + S+G E+G  +FP EV+S A+FRCV+M+ +D+  G  QYAYQT VNIGGH+FKGI
Sbjct: 181 SRLPSHSAGLEMGEASFPGEVSSDALFRCVKMSGVDD-GGDGQYAYQTTVNIGGHLFKGI 240

Query: 241 LYDHGPDQQ-------------------------QPPISASPDGGALLITTAESAALLDP 248
           LYD GP+                            PP+     GG        SA  +DP
Sbjct: 241 LYDQGPESSYMSGGSGGSDHQSSSAGGGGGGHPFNPPVVTDGGGG------VSSAMFVDP 300

[Close]

BLAST of Cp4.1LG14g01720 vs. NCBI nr
Match: gi|449457620|ref|XP_004146546.1| (PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis sativus])

HSP 1 Score: 340.1 bits (871), Expect = 3.2e-90
Identity = 187/277 (67.51%), Postives = 205/277 (74.01%), Query Frame = 1


Query: 1   MAGFFPLGGGGGG-----------SSGGEIIHPT-DGLLWYKNYESFET----EQQQQ-- 60
           MAGFFPL GGG G           ++GGEIIHPT +GL WYKNYE  ET    EQQQQ  
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQ 60

Query: 61  -----GGEGFVYSGENSPARSSLVMVRSG---GEGGGKVISCQDCGNQAKKDCVHMRCRT 120
                GGEGFVYSG+ SPARSSLVMVRSG   G GGG V SCQDCGNQAKKDCVHMRCRT
Sbjct: 61  PAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCRT 120

Query: 121 CCKSRGFLCETHVKSTWVPASKRRERLIRTTGGDSKRPRDT--HAASSGFEIGNFPPEVN 180
           CCKSRGF CETHVKSTWVPASKRR+R +R+ G +SKRP+DT  H  SSG ++GNFP EV 
Sbjct: 121 CCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVT 180

Query: 181 STAVFRCVRMTTLDEPTGTDQYAYQTAVNIGGHIFKGILYDHGPDQQQPPISASPDGGAL 240
           + AVFRCVRMT+LDE    DQYAYQTAVNIGG IFKGILYDHGP+Q  PP S+S      
Sbjct: 181 TPAVFRCVRMTSLDET--DDQYAYQTAVNIGGRIFKGILYDHGPEQPPPPPSSS------ 240

Query: 241 LITTAESAALLDPPPSYPAPLTSYIPAGTQFFQPPTS 250
                 SAALLDP P YP PL++YI AGTQFF PP+S
Sbjct: 241 ------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS 263

[Close]

BLAST of Cp4.1LG14g01720 vs. NCBI nr
Match: gi|659131063|ref|XP_008465489.1| (PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis melo])

HSP 1 Score: 339.0 bits (868), Expect = 7.2e-90
Identity = 183/278 (65.83%), Postives = 203/278 (73.02%), Query Frame = 1


Query: 1   MAGFFPLGGGGGG-----------SSGGEIIHPT-DGLLWYKNYESFETEQ--------- 60
           MAGFFPL GGG G           ++GGEIIHPT +GL WYKNYE  ET +         
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQ 60

Query: 61  ---QQQGGEGFVYSGENSPARSSLVMVRSG---GEGGGKVISCQDCGNQAKKDCVHMRCR 120
              Q+QGGEGFVYSG+ SPARSSLVMVRSG   G GGG V SCQDCGNQAKKDC HMRCR
Sbjct: 61  QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCR 120

Query: 121 TCCKSRGFLCETHVKSTWVPASKRRERLIRTTGGDSKRPRDT--HAASSGFEIGNFPPEV 180
           TCCKSRGF CETHVKSTWVPASKRR+RL+R+ G +SKRP+DT  H  SSG ++ NFP EV
Sbjct: 121 TCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEV 180

Query: 181 NSTAVFRCVRMTTLDEPTGTDQYAYQTAVNIGGHIFKGILYDHGPDQQQPPISASPDGGA 240
            + AVFRCVRMTTLDE    DQYAYQTAVNIGGHIFKGILYDHGP+Q  PP S+S     
Sbjct: 181 TTPAVFRCVRMTTLDET--DDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSS----- 240

Query: 241 LLITTAESAALLDPPPSYPAPLTSYIPAGTQFFQPPTS 250
                  +AALLD  P YP PL++YI AGTQFF PP+S
Sbjct: 241 ------SAAALLDSTPPYPTPLSTYITAGTQFFLPPSS 265

[Close]

BLAST of Cp4.1LG14g01720 vs. NCBI nr
Match: gi|720049664|ref|XP_010271515.1| (PREDICTED: protein SHI RELATED SEQUENCE 1-like [Nelumbo nucifera])

HSP 1 Score: 231.9 bits (590), Expect = 1.2e-57
Identity = 153/317 (48.26%), Postives = 184/317 (58.04%), Query Frame = 1


Query: 1   MAGFFPLGGGGGGSSGGEIIH---PTDGLLWYKNYE-----SFETEQQ---QQGGEGFVY 60
           MAGF  LGGGGGG  G +  H   P + L  Y+N E      FE  QQ   Q+ G+  +Y
Sbjct: 1   MAGF-SLGGGGGGG-GNQQQHNEIPPESLFLYRNEEISYNKGFELWQQHLHQRHGQQDIY 60

Query: 61  SG-------------ENSPARSSLVMVRSGGEGGGKVISCQDCGNQAKKDCVHMRCRTCC 120
           S              + SP+R++LVM+R GG GGG + SCQDCGNQAKKDCVHMRCRTCC
Sbjct: 61  SSALGVGPSRSANISDESPSRAALVMMRQGGSGGGGM-SCQDCGNQAKKDCVHMRCRTCC 120

Query: 121 KSRGFLCETHVKSTWVPASKRRERLIRTT----------GGDSKRPRDTHAAS------- 180
           KSRGF C+THVKSTWVPAS+RRER  +            G + KR R+  +AS       
Sbjct: 121 KSRGFQCQTHVKSTWVPASRRRERQQQLAAVEQQQQQLRGENPKRQRENPSASSLACTRL 180

Query: 181 ----SGFEIGNFPPEVNSTAVFRCVRMTTLDEPTGTDQYAYQTAVNIGGHIFKGILYDHG 240
               SG E+GNFP EVNS AVFRCVR++ +DE     QYAYQTAVNI GH+FKGILYD G
Sbjct: 181 PTTTSGLEVGNFPAEVNSPAVFRCVRVSAMDEADA--QYAYQTAVNIRGHVFKGILYDQG 240

Query: 241 PDQQQPPISASPDGGAL---LIT--------------------TAESAALLDPPPSYPAP 250
           P+    P  +S  GG +   LIT                     + +AALLDP   YP P
Sbjct: 241 PEGHYVPGESSSGGGGIPLNLITAGTAATTTTTTTNVSTSTAAASAAAALLDPSSLYPTP 300

[Close]

BLAST of Cp4.1LG14g01720 vs. NCBI nr
Match: gi|449464562|ref|XP_004149998.1| (PREDICTED: protein SHI RELATED SEQUENCE 1 [Cucumis sativus])

HSP 1 Score: 224.2 bits (570), Expect = 2.6e-55
Identity = 153/335 (45.67%), Postives = 180/335 (53.73%), Query Frame = 1


Query: 1   MAGFFPLGGGGGG-------SSGGEIIHPT--DGLLWYK--NYESFETEQQQQGGEGF-- 60
           M+GFF LGGGGGG       +   + IHP     L WYK  N E ++ +QQQQ       
Sbjct: 1   MSGFFTLGGGGGGRDEEQNNNRPNQFIHPPPDSSLFWYKAGNVELWQQQQQQQHHHHHQE 60

Query: 61  ----------------------VYSGENSPARSSLVMVRSGGEGGGKVISCQDCGNQAKK 120
                                 V + + S +RS   M+ S G GGG  ISCQDCGNQAKK
Sbjct: 61  QPLFQTQSRTTTTTTPYSAPLAVRNSDESSSRSGNFMMISSGSGGGG-ISCQDCGNQAKK 120

Query: 121 DCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRER-----------------LIRTTGGD 180
           DC HMRCRTCCKSRGF CETHVKSTWVPA+KRRER                  ++  GGD
Sbjct: 121 DCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHHHHHQQQLQLHGGD 180

Query: 181 S--KRPRDTHAAS------------SGFEIGNFPPEVNSTAVFRCVRMTTLDEPTGTDQY 240
           +  KR RD +++S            SG EIGNFP E+NS AVFRCVR+++ D+    DQY
Sbjct: 181 NNPKRHRDYNSSSLACTLIPTNNNTSGLEIGNFPAELNSPAVFRCVRVSSADDT--DDQY 240

Query: 241 AYQTAVNIGGHIFKGILYDHGPDQQQ-PPISASPDG--------------GALLITTAES 250
           AYQTAVNIGGH+FKGILYD GP+    PP   S  G              GA   TT   
Sbjct: 241 AYQTAVNIGGHVFKGILYDQGPENNYIPPGETSSGGGGSSSGVQPLNFIAGAADATTGSG 300

[Close]

BLAST of Cp4.1LG14g01720 vs. NCBI nr
Match: gi|659080422|ref|XP_008440782.1| (PREDICTED: protein SHI RELATED SEQUENCE 1 [Cucumis melo])

HSP 1 Score: 221.5 bits (563), Expect = 1.7e-54
Identity = 151/332 (45.48%), Postives = 178/332 (53.61%), Query Frame = 1


Query: 1   MAGFFPLGGGGGG-------SSGGEIIHPT--DGLLWYK--NYESFETEQQQQ------- 60
           M+GFF LGGGGGG       +   + IHP     L WYK  N E ++ +QQ         
Sbjct: 1   MSGFFTLGGGGGGREEEQNNNRPNQFIHPPPDSSLFWYKAGNVELWQQQQQHHHHHQEQP 60

Query: 61  ---------------GGEGFVYSGENSPARSSLVMVRSGGEGGGKVISCQDCGNQAKKDC 120
                               V + + S +RS   M+ S G GGG  ISCQDCGNQAKKDC
Sbjct: 61  LFQTQSRTTTTTTPYSAPLTVRNSDESSSRSGNFMMISSGSGGGG-ISCQDCGNQAKKDC 120

Query: 121 VHMRCRTCCKSRGFLCETHVKSTWVPASKRRER----------------LIRTTGGDS-- 180
            HMRCRTCCKSRGF CETHVKSTWVPA+KRRER                 ++  GGD+  
Sbjct: 121 SHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHHHQQQQLQLHGGDNNP 180

Query: 181 KRPRDTHAAS------------SGFEIGNFPPEVNSTAVFRCVRMTTLDEPTGTDQYAYQ 240
           KR RD +++S            SG EIGNFP E+NS AVFRCVR+++ D+    DQYAYQ
Sbjct: 181 KRHRDYNSSSLACTLIPTNNNTSGLEIGNFPAELNSPAVFRCVRVSSADDT--DDQYAYQ 240

Query: 241 TAVNIGGHIFKGILYDHGPDQQQ-PPISASPDG--------------GALLITTAESAA- 250
           TAVNIGGH+FKGILYD GP+    PP   S  G              GA   TT    + 
Sbjct: 241 TAVNIGGHVFKGILYDQGPENNYIPPGETSSGGGGSSSGVQPLNFITGAADTTTGSGGST 300

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g01720 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SRS1_ARATH	1.5e-47	45.83	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=SRS1 PE=1 SV=2	[more]
SRS5_ARATH	1.9e-45	38.90	Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=SRS5 PE=2 SV=1	[more]
SHI_ARATH	1.2e-44	38.69	Protein SHORT INTERNODES OS=Arabidopsis thaliana GN=SHI PE=1 SV=1	[more]
SRS7_ARATH	6.8e-40	40.64	Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=SRS7 PE=2 SV=1	[more]
SRS2_ARATH	1.2e-36	35.89	Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=SRS2 PE=2 SV=1	[more]

BLAST of Cp4.1LG14g01720 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUG2_CUCSA	2.2e-90	67.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G043960 PE=4 SV=1	[more]
A0A0A0KGL4_CUCSA	1.8e-55	45.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G504650 PE=4 SV=1	[more]
B9T5Y4_RICCO	8.4e-53	42.25	Transcription factor, putative OS=Ricinus communis GN=RCOM_0415480 PE=4 SV=1	[more]
U5G8I9_POPTR	4.1e-52	43.98	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s13610g PE=4 SV=1	[more]
A0A067K8V2_JATCU	1.6e-51	41.08	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13664 PE=4 SV=1	[more]

BLAST of Cp4.1LG14g01720 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G51060.1	8.5e-49	45.83	Lateral root primordium (LRP) protein-related	[more]
AT1G75520.1	1.0e-46	38.90	SHI-related sequence 5	[more]
AT5G66350.1	6.8e-46	38.69	Lateral root primordium (LRP) protein-related	[more]
AT1G19790.1	3.8e-41	40.64	SHI-related sequence 7	[more]
AT4G36260.1	6.8e-38	35.89	Lateral root primordium (LRP) protein-related	[more]

BLAST of Cp4.1LG14g01720 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457620\|ref\|XP_004146546.1\|	3.2e-90	67.51	PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis sativus]	[more]
gi\|659131063\|ref\|XP_008465489.1\|	7.2e-90	65.83	PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis melo]	[more]
gi\|720049664\|ref\|XP_010271515.1\|	1.2e-57	48.26	PREDICTED: protein SHI RELATED SEQUENCE 1-like [Nelumbo nucifera]	[more]
gi\|449464562\|ref\|XP_004149998.1\|	2.6e-55	45.67	PREDICTED: protein SHI RELATED SEQUENCE 1 [Cucumis sativus]	[more]
gi\|659080422\|ref\|XP_008440782.1\|	1.7e-54	45.48	PREDICTED: protein SHI RELATED SEQUENCE 1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007818	SHI
IPR006511	SHI_C
IPR006510	Znf_LRP1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g01720.1	Cp4.1LG14g01720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAMs	TIGR01623	TIGR01623	coord: 75..117 score: 2.7
IPR006511	Lateral Root Primordium type 1, C-terminal	TIGRFAMs	TIGR01624	TIGR01624	coord: 147..196 score: 1.6
IPR007818	Protein of unknown function DUF702	PFAM	PF05142	DUF702	coord: 74..197 score: 3.8
None	No IPR available	PANTHER	PTHR31604	FAMILY NOT NAMED	coord: 44..249 score: 5.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG14g01720	Cucsa.201140	Cucumber (Gy14) v1	cgycpeB0567
Cp4.1LG14g01720	CmaCh16G006400	Cucurbita maxima (Rimu)	cmacpeB344
Cp4.1LG14g01720	CmaCh04G007690	Cucurbita maxima (Rimu)	cmacpeB714
Cp4.1LG14g01720	CmoCh16G006990	Cucurbita moschata (Rifu)	cmocpeB307
Cp4.1LG14g01720	Cla014559	Watermelon (97103) v1	cpewmB218
Cp4.1LG14g01720	Csa4G043960	Cucumber (Chinese Long) v2	cpecuB221
Cp4.1LG14g01720	MELO3C007877	Melon (DHL92) v3.5.1	cpemeB207
Cp4.1LG14g01720	ClCG07G008820	Watermelon (Charleston Gray)	cpewcgB210
Cp4.1LG14g01720	CSPI06G31480	Wild cucumber (PI 183967)	cpecpiB231
Cp4.1LG14g01720	CSPI04G05220	Wild cucumber (PI 183967)	cpecpiB223
Cp4.1LG14g01720	Lsi01G006310	Bottle gourd (USVL1VR-Ls)	cpelsiB166
Cp4.1LG14g01720	Lsi07G002300	Bottle gourd (USVL1VR-Ls)	cpelsiB185
Cp4.1LG14g01720	MELO3C007877.2	Melon (DHL92) v3.6.1	cpemedB248
Cp4.1LG14g01720	CsaV3_6G046800	Cucumber (Chinese Long) v3	cpecucB0280
Cp4.1LG14g01720	CsaV3_4G005360	Cucumber (Chinese Long) v3	cpecucB0266
Cp4.1LG14g01720	Bhi03G000673	Wax gourd	cpewgoB0306
Cp4.1LG14g01720	Bhi01G001886	Wax gourd	cpewgoB0289
Cp4.1LG14g01720	CsGy6G031000	Cucumber (Gy14) v2	cgybcpeB745
Cp4.1LG14g01720	CsGy4G005130	Cucumber (Gy14) v2	cgybcpeB487
Cp4.1LG14g01720	Carg14168	Silver-seed gourd	carcpeB1301
Cp4.1LG14g01720	Carg05760	Silver-seed gourd	carcpeB1414

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG14g01720	Cp4.1LG10g00380	Cucurbita pepo (Zucchini)	cpecpeB064
Cp4.1LG14g01720	Cp4.1LG01g06910	Cucurbita pepo (Zucchini)	cpecpeB237

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG14g01720	Cucurbita pepo (Zucchini)	cpecpeB065
Cp4.1LG14g01720	Cucurbita pepo (Zucchini)	cpecpeB233
Cp4.1LG14g01720	Cucurbita pepo (Zucchini)	cpecpeB239
Cp4.1LG14g01720	Cucurbita moschata (Rifu)	cmocpeB667
Cp4.1LG14g01720	Watermelon (97103) v1	cpewmB232
Cp4.1LG14g01720	Melon (DHL92) v3.5.1	cpemeB196
Cp4.1LG14g01720	Melon (DHL92) v3.6.1	cpemedB238
Cp4.1LG14g01720	Silver-seed gourd	carcpeB0558