Carg05760 (gene) Silver-seed gourd

Overview
NameCarg05760
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionprotein SHI RELATED SEQUENCE 1-like
LocationCucurbita_argyrosperma_scaffold_033 : 856444 .. 857312 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGGTTTTTTCCCACTAGGCGGCGGAGGCGGCGGCAGCAGCGGCGGTGAGATTATTCATCCAACCGACGGATTACTTTGGTACAAGAATTATGAGAGCTTCGAAACAGAACAACAGCAACAAGGTGGAGAAGGGTTTGTTTACTCCGGCGAAAATTCGCCGGCGAGATCGTCGCTGGTGATGGTGAGATCCGGCGGAGACGGCGGAGGGAAGGTTATTAGCTGCCAAGATTGTGGGAATCAAGCGAAAAAAGATTGCGTTCATATGCGATGTAGAACATGTTGTAAAAGCCGTGGGTTTTTGTGTGAAACCCACGTTAAAAGTACATGGGTACCCGCCTCCAAACGCCGTGAGCGGCTGATCCGTACTGCCGGCGGTGACTCCAAACGCCCTAGAGACACCCACGCCGCTTCTTCAGGTACAATTAATTTCTTATTTTTAATTCAATTTTAGTTTTTGAACAAAACCCACATCGATTTTGTTCATGATTTACAGAACCAATTTTTTTTTTTTGGTTTTAGGGTTTGAAATAGGGAATTTCCCGGCGGAAGTAAACTCCACGGCGGTGTTCCGATGCGTACGGATGACAACATTAGACGAACCCACCGGCAACTGATCAATATGCTTATCAAACCGCCGTCCACATCGGTGGCCATATCTTCAAGGGCATTCTTTACGACCACGGCCCTGATCAACACCACCACCACCACCACAACCCACCCATCTCCGCCTCCCCGGACGGCGGAGCCCTCCTCATCACCACCGCCGAGTCCGCCGCACCGCTGGATCCTCCGCCGTCATACCCAGCTCCACTCAACAGCTACATCCCCGCCGGTACGCAATTTTTTCAGCCCCCGACATCTTAG

mRNA sequence

ATGGCCGGTTTTTTCCCACTAGGCGGCGGAGGCGGCGGCAGCAGCGGCGGTGAGATTATTCATCCAACCGACGGATTACTTTGGTACAAGAATTATGAGAGCTTCGAAACAGAACAACAGCAACAAGGTGGAGAAGGGTTTGTTTACTCCGGCGAAAATTCGCCGGCGAGATCGTCGCTGGTGATGGTGAGATCCGGCGGAGACGGCGGAGGGAAGGTTATTAGCTGCCAAGATTGTGGGAATCAAGCGAAAAAAGATTGCGTTCATATGCGATGTAGAACATGTTGTAAAAGCCGTGGGTTTTTGTGTGAAACCCACGTTAAAAGTACATGGGTACCCGCCTCCAAACGCCGTGAGCGGCTGATCCGTACTGCCGGCGGTGACTCCAAACGCCCTAGAGACACCCACGCCGCTTCTTCAGGGTTTGAAATAGGGAATTTCCCGGCGGAAGTAAACTCCACGGCGGTGTTCCGATGCACGAACCCACCGGCAACTGATCAATATGCTTATCAAACCGCCGTCCACATCGGTGGCCATATCTTCAAGGGCATTCTTTACGACCACGGCCCTGATCAACACCACCACCACCACCACAACCCACCCATCTCCGCCTCCCCGGACGGCGGAGCCCTCCTCATCACCACCGCCGAGTCCGCCGCACCGCTGGATCCTCCGCCGTCATACCCAGCTCCACTCAACAGCTACATCCCCGCCGGTACGCAATTTTTTCAGCCCCCGACATCTTAG

Coding sequence (CDS)

ATGGCCGGTTTTTTCCCACTAGGCGGCGGAGGCGGCGGCAGCAGCGGCGGTGAGATTATTCATCCAACCGACGGATTACTTTGGTACAAGAATTATGAGAGCTTCGAAACAGAACAACAGCAACAAGGTGGAGAAGGGTTTGTTTACTCCGGCGAAAATTCGCCGGCGAGATCGTCGCTGGTGATGGTGAGATCCGGCGGAGACGGCGGAGGGAAGGTTATTAGCTGCCAAGATTGTGGGAATCAAGCGAAAAAAGATTGCGTTCATATGCGATGTAGAACATGTTGTAAAAGCCGTGGGTTTTTGTGTGAAACCCACGTTAAAAGTACATGGGTACCCGCCTCCAAACGCCGTGAGCGGCTGATCCGTACTGCCGGCGGTGACTCCAAACGCCCTAGAGACACCCACGCCGCTTCTTCAGGGTTTGAAATAGGGAATTTCCCGGCGGAAGTAAACTCCACGGCGGTGTTCCGATGCACGAACCCACCGGCAACTGATCAATATGCTTATCAAACCGCCGTCCACATCGGTGGCCATATCTTCAAGGGCATTCTTTACGACCACGGCCCTGATCAACACCACCACCACCACCACAACCCACCCATCTCCGCCTCCCCGGACGGCGGAGCCCTCCTCATCACCACCGCCGAGTCCGCCGCACCGCTGGATCCTCCGCCGTCATACCCAGCTCCACTCAACAGCTACATCCCCGCCGGTACGCAATTTTTTCAGCCCCCGACATCTTAG

Protein sequence

MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCTNPPATDQYAYQTAVHIGGHIFKGILYDHGPDQHHHHHHNPPISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS
Homology
[Close]
BLAST of Carg05760 vs. NCBI nr
Match: XP_023553114.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 381.7 bits (979), Expect = 1.9e-102
Identity = 233/254 (91.73%), Postives = 235/254 (92.52%), Query Frame = 0 

Query: 1   MAGFFPLGXXXXXXXXXXIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSL 60
           MAGFFPLGXXXXXXXXXXIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSL
Sbjct: 1   MAGFFPLGXXXXXXXXXXIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSL 60

Query: 61  VMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRER 120
           VMVRSGG+GGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRER
Sbjct: 61  VMVRSGGEGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRER 120

Query: 121 LIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCT------NPPATDQYAYQTAV 180
           LIRT GGDSKRPRDTHAASSGFEIGNFP EVNSTAVFRC        P  TDQYAYQTAV
Sbjct: 121 LIRTTGGDSKRPRDTHAASSGFEIGNFPPEVNSTAVFRCVRMTTLDEPTGTDQYAYQTAV 180

Query: 181 HIGGHIFKGILYDHGPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYPAPLNS 240
           +IGGHIFKGILYDHGPD      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYPAPL S
Sbjct: 181 NIGGHIFKGILYDHGPD-----QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYPAPLTS 240

Query: 241 YIPAGTQFFQPPTS 249
           YIPAGTQFFQPPTS
Sbjct: 241 YIPAGTQFFQPPTS 249

[Close]
BLAST of Carg05760 vs. NCBI nr
Match: XP_022929442.1 (protein SHI RELATED SEQUENCE 3-like [Cucurbita moschata])

HSP 1 Score: 377.5 bits (968), Expect = 3.5e-101
Identity = 239/254 (94.09%), Postives = 240/254 (94.49%), Query Frame = 0 

Query: 1   MAGFFPLGXXXXXXXXXXIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSL 60
           MAGFFPLGXXXXXXXXXXIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSL
Sbjct: 1   MAGFFPLGXXXXXXXXXXIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSL 60

Query: 61  VMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRER 120
           VMVRS   GGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRER
Sbjct: 61  VMVRS---GGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRER 120

Query: 121 LIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCT------NPPATDQYAYQTAV 180
           LIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRC        P  TDQYAYQTAV
Sbjct: 121 LIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCVRMTTLDEPTGTDQYAYQTAV 180

Query: 181 HIGGHIFKGILYDHGPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYPAPLNS 240
           +IGGHIFKGILYDHGPD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYPAPLNS
Sbjct: 181 NIGGHIFKGILYDHGPD-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYPAPLNS 240

Query: 241 YIPAGTQFFQPPTS 249
           YIPAGTQFFQPPTS
Sbjct: 241 YIPAGTQFFQPPTS 250

[Close]
BLAST of Carg05760 vs. NCBI nr
Match: XP_022984770.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima] >XP_022984771.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima])

HSP 1 Score: 362.1 bits (928), Expect = 1.5e-96
Identity = 231/255 (90.59%), Postives = 235/255 (92.16%), Query Frame = 0 

Query: 1   MAGFFPLGXXXXXXXXXXIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSL 60
           MAGFFPLGXXXXXXXXXX IHPTDGLLWYKNYESFETEQQQQGGE F YSGENSPARSSL
Sbjct: 1   MAGFFPLGXXXXXXXXXXXIHPTDGLLWYKNYESFETEQQQQGGERFGYSGENSPARSSL 60

Query: 61  VMVRSGGD-GGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRE 120
           VMVRSGGD GGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRE
Sbjct: 61  VMVRSGGDGGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRE 120

Query: 121 RLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCT------NPPATDQYAYQTA 180
           RLI T GGDSKRPRDTHA SSGFEIGNFPAE+NSTAVFRC        P  TDQYAYQTA
Sbjct: 121 RLISTTGGDSKRPRDTHATSSGFEIGNFPAEINSTAVFRCVRMTTLDEPTGTDQYAYQTA 180

Query: 181 VHIGGHIFKGILYDHGPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYPAPLN 240
           V+IGGHIFKGIL+DHGPD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX YPAPL+
Sbjct: 181 VNIGGHIFKGILHDHGPD-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPAPLS 240

Query: 241 SYIPAGTQFFQPPTS 249
           SYI AGTQFFQPPTS
Sbjct: 241 SYITAGTQFFQPPTS 254

[Close]
BLAST of Carg05760 vs. NCBI nr
Match: XP_022982329.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima] >XP_022982338.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima])

HSP 1 Score: 290.0 bits (741), Expect = 7.4e-75
Identity = 189/263 (71.86%), Postives = 207/263 (78.71%), Query Frame = 0 

Query: 1   MAGFFPLGXXXXXXXXXXIIHPTDGLLWYKNYESF----ETEQQQQGGEGFVYSGENSPA 60
           MAGFFPLG              TDGL WY+NYES     + + QQQ GEGFVYSG+ SP 
Sbjct: 1   MAGFFPLGGGREPNYHLPTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPP 60

Query: 61  RSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASK 120
           RSSLVM+RSG +GGG+VISCQDCGNQAKKDC+HMRCRTCCKSRGF CETHVKSTWVPASK
Sbjct: 61  RSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASK 120

Query: 121 RRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRC----TNPPATDQYAYQT 180
           RRER +R+   + KRPRD  AASSG E+GNFP EV+STAVFRC    T     DQ+AYQT
Sbjct: 121 RRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQT 180

Query: 181 AVHIGGHIFKGILYDHGPD-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           AV+IGGH FKGILYDHGP+       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 AVNIGGHTFKGILYDHGPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XSYPAPLNSYIPAGTQFFQPPTS 249
           X YPAPLN+Y+ AGTQFF PPTS
Sbjct: 241 XXYPAPLNTYVAAGTQFFLPPTS 263

[Close]
BLAST of Carg05760 vs. NCBI nr
Match: XP_023552309.1 (protein SHI RELATED SEQUENCE 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283.1 bits (723), Expect = 9.1e-73
Identity = 188/268 (70.15%), Postives = 207/268 (77.24%), Query Frame = 0 

Query: 1   MAGFFPLGXXXXXXXXXXIIHP---TDGLLWYKNYESF----ETEQQQQGGEGFVYSGEN 60
           MAGF+PLG                 TDGL WY+NYES     + + QQQ GEGFVYSG+ 
Sbjct: 1   MAGFYPLGGGREPNYHLPTTTTTTITDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDE 60

Query: 61  SPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVP 120
           SP RSSLVM+RSG +GGG+VISCQDCGNQAKKDC+HMRCRTCCKSRGF CETHVKSTWVP
Sbjct: 61  SPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVP 120

Query: 121 ASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRC----TNPPATDQYA 180
           ASKRRER +R+ G + KRPRD  AASSG E+GN P EV+STAVFRC    T     DQ+A
Sbjct: 121 ASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNLPVEVSSTAVFRCVRMTTLDETNDQFA 180

Query: 181 YQTAVHIGGHIFKGILYDHGPD---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           YQTAV+IGGH FKGILYDHGP+         XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 YQTAVNIGGHTFKGILYDHGPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXSYPAPLNSYIPAGTQFFQPPTS 249
           XXXXXX YPAPLN+Y+ AGTQFF PPTS
Sbjct: 241 XXXXXXXYPAPLNTYVAAGTQFFLPPTS 268

[Close]
BLAST of Carg05760 vs. TAIR10
Match: AT3G51060.1 (Lateral root primordium (LRP) protein-related)

HSP 1 Score: 155.6 bits (392), Expect = 4.0e-38
Identity = 84/144 (58.33%), Postives = 98/144 (68.06%), Query Frame = 0 

Query: 74  ISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTA-------- 133
           +SCQDCGNQAKKDC HMRCRTCCKSRGF C THV+STWVPA+KRRER  + A        
Sbjct: 142 VSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQLATVQPQTQL 201

Query: 134 -GGDS--KRPRDTHAAS------------SGFEIGNFPAEVNSTAVFRCTNPPAT----D 191
             G+S  KR R+   A+            SG E+GNFPAEV+S+AVFRC    +     +
Sbjct: 202 PRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPAEVSSSAVFRCVRVSSVEDGEE 261

[Close]
BLAST of Carg05760 vs. TAIR10
Match: AT5G66350.1 (Lateral root primordium (LRP) protein-related)

HSP 1 Score: 153.7 bits (387), Expect = 1.5e-37
Identity = 84/159 (52.83%), Postives = 101/159 (63.52%), Query Frame = 0 

Query: 59  SLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRR 118
           +L+M+RSG   GG   SCQDCGNQ+KK   HMRCRTCCKSRG  C THVKSTWVPA+KRR
Sbjct: 105 ALMMMRSGSGSGGP--SCQDCGNQSKKXXSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRR 164

Query: 119 ERLIRTAGGDS---------KRPRDTHAA--------------SSGFEIGNFPAEVNSTA 178
           ER  + + G           KR R+   A              +SG E+GNFP EV+S+A
Sbjct: 165 ERQQQLSTGQQPQQLGGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSA 224

Query: 179 VFRCTNPPATD----QYAYQTAVHIGGHIFKGILYDHGP 191
           VFRC    + D    +YAY+TAV IGGH+FKG+LYD GP
Sbjct: 225 VFRCVRVSSVDDEEEEYAYKTAVSIGGHVFKGVLYDQGP 261

[Close]
BLAST of Carg05760 vs. TAIR10
Match: AT1G19790.1 (SHI-related sequence 7)

HSP 1 Score: 149.1 bits (375), Expect = 3.7e-36
Identity = 85/179 (47.49%), Postives = 102/179 (56.98%), Query Frame = 0 

Query: 52  ENSPARSS---LVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVK 111
           ++ P RSS     + R G       ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVK
Sbjct: 98  DHEPVRSSTGGFTVTRQGN------MNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVK 157

Query: 112 STWVPASKRRERLIRTAGGDSKRPRD---------------------------------T 171
           STWV A+KRRER  + A   +KR RD                                  
Sbjct: 158 STWVSAAKRRERQAQLAVLPAKRIRDANSRXXXXXXXXXXXXXXXXXXXXXXXXXCTRVV 217

Query: 172 HAASSGFEIGNFPAEVNSTAVFRCTNPPATD----QYAYQTAVHIGGHIFKGILYDHGP 191
           +A+SSG E  + P E++S AVFRC    + D    +YAYQTAV IGGH+FKGILYD GP
Sbjct: 218 NASSSGLETSHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGP 270

[Close]
BLAST of Carg05760 vs. TAIR10
Match: AT1G75520.1 (SHI-related sequence 5)

HSP 1 Score: 145.6 bits (366), Expect = 4.1e-35
Identity = 117/237 (49.37%), Postives = 135/237 (56.96%), Query Frame = 0 

Query: 62  MVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERL 121
           + R GG      ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+KRRERL
Sbjct: 117 VTRQGG------MNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERL 176

Query: 122 IRTAG----GDSKR--------------------------------PRDTHA-ASSGFEI 181
            + A       S R                                 R  +A ++SG E+
Sbjct: 177 AQLASLQHHSASSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANTRVVNANSNSGLEV 236

Query: 182 G-NFPAEVNSTAVFRCTNPPATDQ------YAYQTAVHIGGHIFKGILYDHGPDXXXXXX 241
             + P EVNS A+FRC    + ++      YAYQTAV+IGGHIFKGILYD GP+      
Sbjct: 237 SQHLPPEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHH 296

Query: 242 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXS------YPAPLNSYIPAGTQFFQPPTS 249
                   XXXXXXXXXXXXXXXXXXX         YPA LNS+I AGT FF PP S
Sbjct: 297 LNLLASTAXXXXXXXXXXXXXXXXXXXGLMLDPSSLYPAQLNSFI-AGTPFFTPPRS 346

[Close]
BLAST of Carg05760 vs. TAIR10
Match: AT2G18120.1 (SHI-related sequence 4)

HSP 1 Score: 135.6 bits (340), Expect = 4.2e-32
Identity = 74/137 (54.01%), Postives = 86/137 (62.77%), Query Frame = 0 

Query: 74  ISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRER-------LIRTAG 133
           ISCQ+CGNQAKK C H RCRTCCKS G  C THV+STW+P +KRRER            G
Sbjct: 70  ISCQECGNQAKKGCTHGRCRTCCKSNGLHCPTHVRSTWIPIAKRRERQQQLQTPTSNPTG 129

Query: 134 GDSK----RPRDTHAA--SSGFEIG--NFPAEVNSTAVFRCTNPPATD----QYAYQTAV 192
           G  +    R  + HA   SSG E+G   FP EV+S A+FRC     TD    QYAYQT V
Sbjct: 130 GSGRVGKYRDINQHATLDSSGLEMGETRFPDEVSSDALFRCVRMSGTDDGEGQYAYQTTV 189

[Close]
BLAST of Carg05760 vs. Swiss-Prot
Match: sp|Q9SD40|SRS1_ARATH (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 7.1e-37
Identity = 84/144 (58.33%), Postives = 98/144 (68.06%), Query Frame = 0 

Query: 74  ISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTA-------- 133
           +SCQDCGNQAKKDC HMRCRTCCKSRGF C THV+STWVPA+KRRER  + A        
Sbjct: 142 VSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQLATVQPQTQL 201

Query: 134 -GGDS--KRPRDTHAAS------------SGFEIGNFPAEVNSTAVFRCTNPPAT----D 191
             G+S  KR R+   A+            SG E+GNFPAEV+S+AVFRC    +     +
Sbjct: 202 PRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPAEVSSSAVFRCVRVSSVEDGEE 261

[Close]
BLAST of Carg05760 vs. Swiss-Prot
Match: sp|Q9XGX0|SHI_ARATH (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.7e-36
Identity = 84/159 (52.83%), Postives = 101/159 (63.52%), Query Frame = 0 

Query: 59  SLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRR 118
           +L+M+RSG   GG   SCQDCGNQ+KK   HMRCRTCCKSRG  C THVKSTWVPA+KRR
Sbjct: 105 ALMMMRSGSGSGGP--SCQDCGNQSKKXXSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRR 164

Query: 119 ERLIRTAGGDS---------KRPRDTHAA--------------SSGFEIGNFPAEVNSTA 178
           ER  + + G           KR R+   A              +SG E+GNFP EV+S+A
Sbjct: 165 ERQQQLSTGQQPQQLGGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSA 224

Query: 179 VFRCTNPPATD----QYAYQTAVHIGGHIFKGILYDHGP 191
           VFRC    + D    +YAY+TAV IGGH+FKG+LYD GP
Sbjct: 225 VFRCVRVSSVDDEEEEYAYKTAVSIGGHVFKGVLYDQGP 261

[Close]
BLAST of Carg05760 vs. Swiss-Prot
Match: sp|Q9FXH7|SRS7_ARATH (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.7e-35
Identity = 85/179 (47.49%), Postives = 102/179 (56.98%), Query Frame = 0 

Query: 52  ENSPARSS---LVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVK 111
           ++ P RSS     + R G       ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVK
Sbjct: 98  DHEPVRSSTGGFTVTRQGN------MNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVK 157

Query: 112 STWVPASKRRERLIRTAGGDSKRPRD---------------------------------T 171
           STWV A+KRRER  + A   +KR RD                                  
Sbjct: 158 STWVSAAKRRERQAQLAVLPAKRIRDANSRXXXXXXXXXXXXXXXXXXXXXXXXXCTRVV 217

Query: 172 HAASSGFEIGNFPAEVNSTAVFRCTNPPATD----QYAYQTAVHIGGHIFKGILYDHGP 191
           +A+SSG E  + P E++S AVFRC    + D    +YAYQTAV IGGH+FKGILYD GP
Sbjct: 218 NASSSGLETSHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGP 270

[Close]
BLAST of Carg05760 vs. Swiss-Prot
Match: sp|Q9LQZ5|SRS5_ARATH (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 7.4e-34
Identity = 117/237 (49.37%), Postives = 135/237 (56.96%), Query Frame = 0 

Query: 62  MVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERL 121
           + R GG      ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+KRRERL
Sbjct: 117 VTRQGG------MNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERL 176

Query: 122 IRTAG----GDSKR--------------------------------PRDTHA-ASSGFEI 181
            + A       S R                                 R  +A ++SG E+
Sbjct: 177 AQLASLQHHSASSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANTRVVNANSNSGLEV 236

Query: 182 G-NFPAEVNSTAVFRCTNPPATDQ------YAYQTAVHIGGHIFKGILYDHGPDXXXXXX 241
             + P EVNS A+FRC    + ++      YAYQTAV+IGGHIFKGILYD GP+      
Sbjct: 237 SQHLPPEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHH 296

Query: 242 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXS------YPAPLNSYIPAGTQFFQPPTS 249
                   XXXXXXXXXXXXXXXXXXX         YPA LNS+I AGT FF PP S
Sbjct: 297 LNLLASTAXXXXXXXXXXXXXXXXXXXGLMLDPSSLYPAQLNSFI-AGTPFFTPPRS 346

[Close]
BLAST of Carg05760 vs. Swiss-Prot
Match: sp|Q9SI19|SRS4_ARATH (Protein SHI RELATED SEQUENCE 4 OS=Arabidopsis thaliana OX=3702 GN=SRS4 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 7.6e-31
Identity = 74/137 (54.01%), Postives = 86/137 (62.77%), Query Frame = 0 

Query: 74  ISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRER-------LIRTAG 133
           ISCQ+CGNQAKK C H RCRTCCKS G  C THV+STW+P +KRRER            G
Sbjct: 70  ISCQECGNQAKKGCTHGRCRTCCKSNGLHCPTHVRSTWIPIAKRRERQQQLQTPTSNPTG 129

Query: 134 GDSK----RPRDTHAA--SSGFEIG--NFPAEVNSTAVFRCTNPPATD----QYAYQTAV 192
           G  +    R  + HA   SSG E+G   FP EV+S A+FRC     TD    QYAYQT V
Sbjct: 130 GSGRVGKYRDINQHATLDSSGLEMGETRFPDEVSSDALFRCVRMSGTDDGEGQYAYQTTV 189

[Close]
BLAST of Carg05760 vs. TrEMBL
Match: tr|A0A1S3CNX3|A0A1S3CNX3_CUCME (protein SHI RELATED SEQUENCE 1-like OS=Cucumis melo OX=3656 GN=LOC103503109 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 6.4e-67
Identity = 171/281 (60.85%), Postives = 188/281 (66.90%), Query Frame = 0 

Query: 1   MAGFFPLG-----------XXXXXXXXXXIIHP-TDGLLWYKNYESFETEQQQ------- 60
           MAGFFPL                      IIHP T+GL WYKNYE  ET + +       
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEXXXXXXX 60

Query: 61  -----QGGEGFVYSGENSPARSSLVMVRSGGDG---GGKVISCQDCGNQAKKDCVHMRCR 120
                   EGFVYSG+ SPARSSLVMVRSG  G   GG V SCQDCGNQAKKDC HMRCR
Sbjct: 61  XXXXXXXXEGFVYSGDESPARSSLVMVRSGRGGXXXGGPVTSCQDCGNQAKKDCAHMRCR 120

Query: 121 TCCKSRGFLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDT--HAASSGFEIGNFPAEV 180
           TCCKSRGF CETHVKSTWVPASKRR+RL+R+ G +SKRP+DT  H  SSG ++ NFP EV
Sbjct: 121 TCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEV 180

Query: 181 NSTAVFRC----TNPPATDQYAYQTAVHIGGHIFKGILYDHGPDXXXXXXXXXXXXXXXX 240
            + AVFRC    T     DQYAYQTAV+IGGHIFKGILYDHGP+                
Sbjct: 181 TTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPE---------------- 240

Query: 241 XXXXXXXXXXXXXXXXXXXSYPAPLNSYIPAGTQFFQPPTS 249
           XXXXXXXXXXXXXXXXXXX YP PL++YI AGTQFF PP+S
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXYPTPLSTYITAGTQFFLPPSS 265

[Close]
BLAST of Carg05760 vs. TrEMBL
Match: tr|A0A0A0KUG2|A0A0A0KUG2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G043960 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.8e-51
Identity = 143/280 (51.07%), Postives = 159/280 (56.79%), Query Frame = 0 

Query: 1   MAGFFPLG-----------XXXXXXXXXXIIHP-TDGLLWYKNYESFETEQQQ------- 60
           MAGFFPL                      IIHP T+GL WYKNYE  ET + +       
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEXXXXXXX 60

Query: 61  -------QGGEGFVYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRT 120
                                                 V SCQDCGNQAKKDCVHMRCRT
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTSCQDCGNQAKKDCVHMRCRT 120

Query: 121 CCKSRGFLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDT--HAASSGFEIGNFPAEVN 180
           CCKSRGF CETHVKSTWVPASKRR+R +R+ G +SKRP+DT  H  SSG ++GNFP EV 
Sbjct: 121 CCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVT 180

Query: 181 STAVFRCTN----PPATDQYAYQTAVHIGGHIFKGILYDHGPDXXXXXXXXXXXXXXXXX 240
           + AVFRC          DQYAYQTAV+IGG IFKGILYDHGP+                 
Sbjct: 181 TPAVFRCVRMTSLDETDDQYAYQTAVNIGGRIFKGILYDHGPE----------------- 240

Query: 241 XXXXXXXXXXXXXXXXXXSYPAPLNSYIPAGTQFFQPPTS 249
           XXXXXXXXXXXXXXX    YP PL++YI AGTQFF PP+S
Sbjct: 241 XXXXXXXXXXXXXXXPTPPYPTPLSTYITAGTQFFLPPSS 263

[Close]
BLAST of Carg05760 vs. TrEMBL
Match: tr|A0A2R6S2L9|A0A2R6S2L9_ACTCH (Protein SHI RELATED SEQUENCE like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc01042 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.0e-43
Identity = 108/226 (47.79%), Postives = 126/226 (55.75%), Query Frame = 0 

Query: 53  NSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWV 112
           + P RS  VM+RSGG G    ISCQDCGNQAKKDC HMRCRTCCKSRGF C THVKSTWV
Sbjct: 97  DEPTRSGFVMMRSGGGG----ISCQDCGNQAKKDCTHMRCRTCCKSRGFQCHTHVKSTWV 156

Query: 113 PASKRRERLIRTAGGDSKRPRDTH--------------AASSGFEIGNFPAEVNSTAVFR 172
           PA+KRRER  R    + KR R+++              A +SG E+GNFPAEVNS AVFR
Sbjct: 157 PAAKRRERQQRVERENPKRMRESNTPIASSSLVCTRLPAIASGLEVGNFPAEVNSAAVFR 216

Query: 173 CT-----NPPATDQYAYQTAVHIGGHIFKGILYDHGPDXXXXXXXXXXXXXXXXXXXXXX 232
           C      N    D+YAYQTAV+IGGH+FKGILYD G +                      
Sbjct: 217 CVRVSAMNNGGDDEYAYQTAVNIGGHLFKGILYDQGAESQYMAGESSSGTASGLNLIGTA 276

Query: 233 XXXXXXXXXXXXXS-----------YPAPLNSYIPAGTQFFQPPTS 249
                                    +PAPLN+++ +GTQFF  P S
Sbjct: 277 AATDSSAVTATAADSPAAAFLDPSLFPAPLNTFM-SGTQFFPHPRS 317

[Close]
BLAST of Carg05760 vs. TrEMBL
Match: tr|A0A151RQN6|A0A151RQN6_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_033659 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 5.0e-43
Identity = 106/210 (50.48%), Postives = 123/210 (58.57%), Query Frame = 0 

Query: 63  VRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLI 122
           +RSGG G G V +CQDCGNQAKKDC H+RCRTCCKSRGF C+THVKSTWVPA+KRRER  
Sbjct: 1   MRSGGSGSGGV-NCQDCGNQAKKDCAHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQ 60

Query: 123 RTA--------GGDS--KRPRDTHAASS-------GFEIGNFPAEVNSTAVFRCTNPPAT 182
             A        GGD+  KR RD+  A S       G E+G FP EVN++AVFRC    A 
Sbjct: 61  LLAASHHPQLCGGDNIPKRHRDSQLACSSQPITTAGLELGQFPPEVNTSAVFRCVRVSAV 120

Query: 183 D----QYAYQTAVHIGGHIFKGILYDHGPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242
           D    Q AYQT+V+IGGH+FKGILYD GP+                              
Sbjct: 121 DASDEQCAYQTSVNIGGHVFKGILYDQGPESSYTSAPAEGSSGGEPQQLGLITAATTATT 180

Query: 243 XXXXXS---YPAPLNSYIPAGTQFFQPPTS 249
                    YPAPLN++I  GTQF+QPP S
Sbjct: 181 GGNPFEPSLYPAPLNAFIAGGTQFYQPPRS 209

[Close]
BLAST of Carg05760 vs. TrEMBL
Match: tr|A0A059AGY1|A0A059AGY1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_J02389 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 9.3e-42
Identity = 95/145 (65.52%), Postives = 108/145 (74.48%), Query Frame = 0 

Query: 58  SSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKR 117
           S+ +++R GG      ISCQDCGNQAKKDCVH RCRTCCKSRG  C+THVKSTWVPAS+R
Sbjct: 104 SAFLLMREGG------ISCQDCGNQAKKDCVHFRCRTCCKSRGLPCDTHVKSTWVPASRR 163

Query: 118 RER--LIRTAGGDS-KRPRD----THAASSGFEIGNFPAEVNSTAVFRCTNPPA----TD 177
           RER  L    GGD  KR R+     HA SSG E+GNFPAEVNS+A+FRC    +     D
Sbjct: 164 RERQQLQLLHGGDCVKRLREDHDLPHANSSGLEMGNFPAEVNSSALFRCVRVSSIDDNDD 223

Query: 178 QYAYQTAVHIGGHIFKGILYDHGPD 192
           QYAYQTAV+IGGH+FKGILYD GPD
Sbjct: 224 QYAYQTAVNIGGHVFKGILYDQGPD 242

The following BLAST results are available for this feature:
BLAST of Carg05760 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023553114.11.9e-10291.73protein SHI RELATED SEQUENCE 1-like [Cucurbita pepo subsp. pepo][more]
XP_022929442.13.5e-10194.09protein SHI RELATED SEQUENCE 3-like [Cucurbita moschata][more]
XP_022984770.11.5e-9690.59protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima] >XP_022984771.1 protein S... [more]
XP_022982329.17.4e-7571.86protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima] >XP_022982338.1 protein S... [more]
XP_023552309.19.1e-7370.15protein SHI RELATED SEQUENCE 1-like isoform X1 [Cucurbita pepo subsp. pepo][more]
BLAST of Carg05760 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G51060.14.0e-3858.33Lateral root primordium (LRP) protein-related[more]
AT5G66350.11.5e-3752.83Lateral root primordium (LRP) protein-related[more]
AT1G19790.13.7e-3647.49SHI-related sequence 7[more]
AT1G75520.14.1e-3549.37SHI-related sequence 5[more]
AT2G18120.14.2e-3254.01SHI-related sequence 4[more]
BLAST of Carg05760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SD40|SRS1_ARATH7.1e-3758.33Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2[more]
sp|Q9XGX0|SHI_ARATH2.7e-3652.83Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1[more]
sp|Q9FXH7|SRS7_ARATH6.7e-3547.49Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1[more]
sp|Q9LQZ5|SRS5_ARATH7.4e-3449.37Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1[more]
sp|Q9SI19|SRS4_ARATH7.6e-3154.01Protein SHI RELATED SEQUENCE 4 OS=Arabidopsis thaliana OX=3702 GN=SRS4 PE=1 SV=1[more]
BLAST of Carg05760 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CNX3|A0A1S3CNX3_CUCME6.4e-6760.85protein SHI RELATED SEQUENCE 1-like OS=Cucumis melo OX=3656 GN=LOC103503109 PE=4... [more]
tr|A0A0A0KUG2|A0A0A0KUG2_CUCSA3.8e-5151.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G043960 PE=4 SV=1[more]
tr|A0A2R6S2L9|A0A2R6S2L9_ACTCH1.0e-4347.79Protein SHI RELATED SEQUENCE like OS=Actinidia chinensis var. chinensis OX=15908... [more]
tr|A0A151RQN6|A0A151RQN6_CAJCA5.0e-4350.48Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_033659 PE=4 SV=1[more]
tr|A0A059AGY1|A0A059AGY1_EUCGR9.3e-4265.52Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_J02389 PE=4 SV... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007818SHI
IPR006510Znf_LRP1
IPR006511SHI_C
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg05760-RACarg05760-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006511SHORT INTERNODES, C-terminalTIGRFAMTIGR01624TIGR01624coord: 147..190
e-value: 1.9E-18
score: 64.1
IPR006510Zinc finger, lateral root primordium type 1TIGRFAMTIGR01623TIGR01623coord: 75..117
e-value: 2.7E-27
score: 92.4
NoneNo IPR availablePFAMPF05142DUF702coord: 74..191
e-value: 1.3E-45
score: 155.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..201
NoneNo IPR availablePANTHERPTHR31604:SF14PROTEIN SHI RELATED SEQUENCE 1-RELATEDcoord: 52..248
IPR007818SHI protein familyPANTHERPTHR31604FAMILY NOT NAMEDcoord: 52..248

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg05760Cla014559Watermelon (97103) v1carwmB1018
Carg05760Csa4G043960Cucumber (Chinese Long) v2carcuB1033
Carg05760ClCG07G008820Watermelon (Charleston Gray)carwcgB0999
Carg05760CSPI04G05220Wild cucumber (PI 183967)carcpiB1057
Carg05760Cucsa.201140Cucumber (Gy14) v1carcgyB1134
Carg05760CmaCh04G007690Cucurbita maxima (Rimu)carcmaB1414
Carg05760CmaCh16G006400Cucurbita maxima (Rimu)carcmaB1409
Carg05760CmoCh16G006990Cucurbita moschata (Rifu)carcmoB1366
Carg05760Lsi07G002300Bottle gourd (USVL1VR-Ls)carlsiB935
Carg05760Lsi01G006310Bottle gourd (USVL1VR-Ls)carlsiB930
Carg05760Cp4.1LG14g01720Cucurbita pepo (Zucchini)carcpeB1414
Carg05760Cp4.1LG10g00380Cucurbita pepo (Zucchini)carcpeB1412
Carg05760Cp4.1LG01g06910Cucurbita pepo (Zucchini)carcpeB1418
Carg05760CsGy4G005130Cucumber (Gy14) v2carcgybB1005
Carg05760CsaV3_4G005360Cucumber (Chinese Long) v3carcucB1063
Carg05760Cla97C01G019470Watermelon (97103) v2carwmbB1072
Carg05760Cla97C07G135860Watermelon (97103) v2carwmbB1084
Carg05760Bhi01G001886Wax gourdcarwgoB1193
Carg05760Bhi03G000673Wax gourdcarwgoB1198
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg05760Carg14168Silver-seed gourdcarcarB646
The following block(s) are covering this gene:
GeneOrganismBlock
Carg05760Silver-seed gourdcarcarB432
Carg05760Cucumber (Gy14) v2carcgybB1006
Carg05760Cucurbita maxima (Rimu)carcmaB1413
Carg05760Cucurbita maxima (Rimu)carcmaB1415
Carg05760Cucurbita moschata (Rifu)carcmoB1370
Carg05760Cucurbita moschata (Rifu)carcmoB1371
Carg05760Cucurbita pepo (Zucchini)carcpeB1413
Carg05760Cucurbita pepo (Zucchini)carcpeB1417
Carg05760Cucurbita pepo (Zucchini)carcpeB1419
Carg05760Wild cucumber (PI 183967)carcpiB1058
Carg05760Cucumber (Chinese Long) v2carcuB1034
Carg05760Cucumber (Chinese Long) v3carcucB1068
Carg05760Melon (DHL92) v3.5.1carmeB0992
Carg05760Melon (DHL92) v3.5.1carmeB0994
Carg05760Melon (DHL92) v3.6.1carmedB1004
Carg05760Melon (DHL92) v3.6.1carmedB1006
Carg05760Watermelon (Charleston Gray)carwcgB0993
Carg05760Watermelon (97103) v1carwmB1021
Carg05760Watermelon (97103) v1carwmB1022
Carg05760Watermelon (97103) v2carwmbB1073