CmaCh04G007690 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G007690
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	SHI-related sequence 7, putative
Location	Cma_Chr04 : 3906567 .. 3908384 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATAAGAGAGAGAAAAGGTAATCAATCATGTCTGCGACTGCAACATAATCAGAGGATAGAGAAAGGGAAAGGGCTCAGAGAAGGCAGAGAAGAAAAACAGCAACAGCAACAAGAAGAAGAAGAAGAAGCAGCAGCAGCAGCGTATGAGTGGATATGGGACTTTAGTGGTGTATTTAAGTTAGCACTTCGCCCCTAAACAAAGCCCATGGCGGCGTTGCAGACTTCACTTCAGTTTTAGACAGAGAGAGAAAAATACCCTTTAGTGTATTAGAGAGACAGAGACAGAGACAGAGAGATTTCAGAATCTGATTCCCAATTCGACCTCTTTTCGACCTCTTTTCTACCTCCCCCCCCCCTTTCTTTTCTCTTGTAGTACGAAGAATTTGATTAAGAATTTCGAGAATTTGAGAAGGTAAGGAGAAAAAGTTGGAAAGGAATTGATTGATACATACCCTTTTTACAACTCTGGCTTTCGATCGCCCTTGAGAGGTTGTTTCTGATATGGATTTTAATTCCAAATCAGGAATAGTATCTCCGGTGGAAATATGGCCGGTTTTTTCCCACTAGGCGGCGGAAGAGAACCCAATTATCACCTTCCCACTACCACCACCACGGACGGATTATTTTGGTACAGAAATTATGAGAGCCTTGGAATATGGCAGCAACAGCAGGTGCAGCAGCAAGCGGGAGAAGGGTTTGTTTACTCGGGCGATGAATCGCCTCCAAGATCGTCGTTGGTGATGCTGAGATCCGGCAGAAACGGGGGAGGGCAAGTAATAAGCTGCCAAGACTGTGGAAATCAAGCCAAAAAGGATTGCCTTCACATGCGATGTAGAACTTGCTGTAAAAGTCGTGGCTTTGACTGTGAAACCCACGTCAAAAGTACTTGGGTTCCGGCCTCCAAACGCCGTGAGCGACACCTCCGCAGCGACGCCACTAATCTCAAACGACCTCGAGACAACACCGCCGCTTCCTCAGGTACAATCAAATTAATTCTTGCTCTTTTCATTTTTATTTTTATTTTTATATATTATATTTTTTTAGATTTCTTGTGAGGGAGGGCTTTGTTTTGGAAGTTTTTCCAAATTCCAGCAAGACCCACATCGATTTTGGTCATGATTGACAGAATCAATCTCTCTCTTTCTCTAAAATGGTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTGGTTTTAGGGTTAGAAATGGGGAATTTTCCGATGGAAGTGAGCTCAACGGCGGTGTTTCGGTGCGTGCGGATGACAACGTTGGACGAAACCAACGACCAATTTGCTTACCAAACAGCCGTCAACATCGGAGGCCATACCTTCAAGGGCATTCTTTACGACCACGGCCCTGAACAACAACAACAACCACCACCACCACCCAACTCCGCCTCCCCCGACGGTGGTGCCCTCCTCATCACCGCCCCCACCACCACCATGGAATTGCCGCCCATCAGCGCCGCATTGCTCGATCCTCCTCCGCCGTACCCAGCTCCTCTGAACACCTACGTCGCCGCCGGTACGCAATTTTTTCTTCCCCCAACGTCTTAATGTTGTAGCGAATTTTAAGAGATCGAAGAGAAATAGCTGAAATTGAGAAGGGGGAATGAAGGAAGTATATAATTTTTTATGATAAATTTATAAGCTTGTAATTTTTCAAGAGTTCGCATTAATATGCCGCCATTGTTGGAACTTCGATGCAACCTTTTCCTTTTTTTTTTTCTTTCTTCTCGGTTTCGTATTTCGTAATTCTCAATCTCTCAAACCCT

mRNA sequence

GAATAAGAGAGAGAAAAGGTAATCAATCATGTCTGCGACTGCAACATAATCAGAGGATAGAGAAAGGGAAAGGGCTCAGAGAAGGCAGAGAAGAAAAACAGCAACAGCAACAAGAAGAAGAAGAAGAAGCAGCAGCAGCAGCGTATGAGTGGATATGGGACTTTAGTGGTGTATTTAAGTTAGCACTTCGCCCCTAAACAAAGCCCATGGCGGCGTTGCAGACTTCACTTCAGTTTTAGACAGAGAGAGAAAAATACCCTTTAGTGTATTAGAGAGACAGAGACAGAGACAGAGAGATTTCAGAATCTGATTCCCAATTCGACCTCTTTTCGACCTCTTTTCTACCTCCCCCCCCCCTTTCTTTTCTCTTGTAGTACGAAGAATTTGATTAAGAATTTCGAGAATTTGAGAAGGTAAGGAGAAAAAGTTGGAAAGGAATTGATTGATACATACCCTTTTTACAACTCTGGCTTTCGATCGCCCTTGAGAGGTTGTTTCTGATATGGATTTTAATTCCAAATCAGGAATAGTATCTCCGGTGGAAATATGGCCGGTTTTTTCCCACTAGGCGGCGGAAGAGAACCCAATTATCACCTTCCCACTACCACCACCACGGACGGATTATTTTGGTACAGAAATTATGAGAGCCTTGGAATATGGCAGCAACAGCAGGTGCAGCAGCAAGCGGGAGAAGGGTTTGTTTACTCGGGCGATGAATCGCCTCCAAGATCGTCGTTGGTGATGCTGAGATCCGGCAGAAACGGGGGAGGGCAAGTAATAAGCTGCCAAGACTGTGGAAATCAAGCCAAAAAGGATTGCCTTCACATGCGATGTAGAACTTGCTGTAAAAGTCGTGGCTTTGACTGTGAAACCCACGTCAAAAGTACTTGGGTTCCGGCCTCCAAACGCCGTGAGCGACACCTCCGCAGCGACGCCACTAATCTCAAACGACCTCGAGACAACACCGCCGCTTCCTCAGGGTTAGAAATGGGGAATTTTCCGATGGAAGTGAGCTCAACGGCGGTGTTTCGGTGCGTGCGGATGACAACGTTGGACGAAACCAACGACCAATTTGCTTACCAAACAGCCGTCAACATCGGAGGCCATACCTTCAAGGGCATTCTTTACGACCACGGCCCTGAACAACAACAACAACCACCACCACCACCCAACTCCGCCTCCCCCGACGGTGGTGCCCTCCTCATCACCGCCCCCACCACCACCATGGAATTGCCGCCCATCAGCGCCGCATTGCTCGATCCTCCTCCGCCGTACCCAGCTCCTCTGAACACCTACGTCGCCGCCGGTACGCAATTTTTTCTTCCCCCAACGTCTTAATGTTGTAGCGAATTTTAAGAGATCGAAGAGAAATAGCTGAAATTGAGAAGGGGGAATGAAGGAAGTATATAATTTTTTATGATAAATTTATAAGCTTGTAATTTTTCAAGAGTTCGCATTAATATGCCGCCATTGTTGGAACTTCGATGCAACCTTTTCCTTTTTTTTTTTCTTTCTTCTCGGTTTCGTATTTCGTAATTCTCAATCTCTCAAACCCT

Coding sequence (CDS)

ATGGCCGGTTTTTTCCCACTAGGCGGCGGAAGAGAACCCAATTATCACCTTCCCACTACCACCACCACGGACGGATTATTTTGGTACAGAAATTATGAGAGCCTTGGAATATGGCAGCAACAGCAGGTGCAGCAGCAAGCGGGAGAAGGGTTTGTTTACTCGGGCGATGAATCGCCTCCAAGATCGTCGTTGGTGATGCTGAGATCCGGCAGAAACGGGGGAGGGCAAGTAATAAGCTGCCAAGACTGTGGAAATCAAGCCAAAAAGGATTGCCTTCACATGCGATGTAGAACTTGCTGTAAAAGTCGTGGCTTTGACTGTGAAACCCACGTCAAAAGTACTTGGGTTCCGGCCTCCAAACGCCGTGAGCGACACCTCCGCAGCGACGCCACTAATCTCAAACGACCTCGAGACAACACCGCCGCTTCCTCAGGGTTAGAAATGGGGAATTTTCCGATGGAAGTGAGCTCAACGGCGGTGTTTCGGTGCGTGCGGATGACAACGTTGGACGAAACCAACGACCAATTTGCTTACCAAACAGCCGTCAACATCGGAGGCCATACCTTCAAGGGCATTCTTTACGACCACGGCCCTGAACAACAACAACAACCACCACCACCACCCAACTCCGCCTCCCCCGACGGTGGTGCCCTCCTCATCACCGCCCCCACCACCACCATGGAATTGCCGCCCATCAGCGCCGCATTGCTCGATCCTCCTCCGCCGTACCCAGCTCCTCTGAACACCTACGTCGCCGCCGGTACGCAATTTTTTCTTCCCCCAACGTCTTAA

Protein sequence

MAGFFPLGGGREPNYHLPTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

Homology

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BLAST of CmaCh04G007690 vs. Swiss-Prot
Match: SHI_ARATH (Protein SHORT INTERNODES OS=Arabidopsis thaliana GN=SHI PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.3e-49
Identity = 136/338 (40.24%), Postives = 179/338 (52.96%), Query Frame = 1


Query: 1   MAGFFPLG---GGREPNYHL-----PTTTTTDGLFWYRNYES--------------LGIW 60
           MAGFF LG   GG  P+ H      P+++ T+   W RN  S              L +W
Sbjct: 1   MAGFFSLGHGGGGNTPDNHRTNTNNPSSSGTESWLWCRNPNSNADGGEAGPSYKGTLELW 60

Query: 61  Q---------QQQVQQQ---------AGEGFVYSGDESPPRS--SLVMLRSGRNGGGQVI 120
           Q         QQQ QQQ         AG G   S       S  +L+M+RSG   GG   
Sbjct: 61  QHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGGP-- 120

Query: 121 SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRER-------------- 180
           SCQDCGNQ+KKDC HMRCRTCCKSRG DC THVKSTWVPA+KRRER              
Sbjct: 121 SCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQLG 180

Query: 181 ---------HLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQ 240
                     + + +T++   R  +  +SGLE+GNFP EVSS+AVFRCVR++++D+  ++
Sbjct: 181 GSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDEEEE 240

Query: 241 FAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGA----LLITAPTTTMELPP 259
           +AY+TAV+IGGH FKG+LYD GP ++         +S  GG+    L+   P+ +   P 
Sbjct: 241 YAYKTAVSIGGHVFKGVLYDQGPAER---------SSSGGGSQPLNLITAGPSASSSSPN 300

[Close]

BLAST of CmaCh04G007690 vs. Swiss-Prot
Match: SRS1_ARATH (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=SRS1 PE=1 SV=2)

HSP 1 Score: 197.6 bits (501), Expect = 1.7e-49
Identity = 150/371 (40.43%), Postives = 187/371 (50.40%), Query Frame = 1


Query: 1   MAGFFPL--------GGGREPNYHLPTTT----TTDGLFWYRNYE--------------- 60
           MAGFF L        GGG     H   T      ++   WYRN                 
Sbjct: 1   MAGFFSLDGGGGGGGGGGNNQEDHRSNTNPPPPVSEAWLWYRNPNVNANANTNVNANAPS 60

Query: 61  -------SLGIWQQ----------QQVQQQ-------AGEG--------FVYSGDESPP- 120
                  +L +WQ           QQ QQ+       AG G        F  SG+ S   
Sbjct: 61  SSNAALGTLELWQNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISGETSTAG 120

Query: 121 ---RSSLVMLRSGRNGGGQV-ISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWV 180
               ++++M+RSG +GGG   +SCQDCGNQAKKDC HMRCRTCCKSRGF+C THV+STWV
Sbjct: 121 AGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWV 180

Query: 181 PASKRRERHLR----SDATNL-------KRPRDNTAAS------------SGLEMGNFPM 240
           PA+KRRER  +       T L       KR R+N  A+            SGLE+GNFP 
Sbjct: 181 PAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPA 240

Query: 241 EVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQ----QQPPPPPN 264
           EVSS+AVFRCVR++++++  ++FAYQTAV+IGGH FKGILYD GP               
Sbjct: 241 EVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAAGE 300

[Close]

BLAST of CmaCh04G007690 vs. Swiss-Prot
Match: SRS5_ARATH (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=SRS5 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.6e-42
Identity = 129/312 (41.35%), Postives = 156/312 (50.00%), Query Frame = 1


Query: 29  YRNYESLGIW----------QQQQVQQQAGE--------GFVYSGDESP-----PRSSLV 88
           Y N +   IW          QQQQ QQQ           G V SG  S       RS   
Sbjct: 45  YNNNKGFEIWPPQYFQQQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYF 104

Query: 89  MLRSGRNGGGQVIS------CQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPAS 148
            + S    GG  ++      CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+
Sbjct: 105 NVVSDHEPGGFTVTRQGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAA 164

Query: 149 KRRER---------HLRS--DATNLKRPRD--------------------------NTAA 208
           KRRER         H  S  +  N KR R+                          N  +
Sbjct: 165 KRRERLAQLASLQHHSASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANS 224

Query: 209 SSGLEMG-NFPMEVSSTAVFRCVRMTTLDETNDQ--FAYQTAVNIGGHTFKGILYDHGPE 264
           +SGLE+  + P EV+S A+FRCVR+++++E  D   +AYQTAVNIGGH FKGILYD GPE
Sbjct: 225 NSGLEVSQHLPPEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPE 284

[Close]

BLAST of CmaCh04G007690 vs. Swiss-Prot
Match: SRS2_ARATH (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=SRS2 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.6e-39
Identity = 122/319 (38.24%), Postives = 156/319 (48.90%), Query Frame = 1


Query: 1   MAGFFPLGGGREPNYHLPTTTTTD---GLFWYR---NYESLGIWQQQQVQQQAGEGFVYS 60
           MAG F LGG    N                WYR   N  ++     QQV Q   E  +  
Sbjct: 1   MAGIFSLGGNNNNNGDEEEENQQQQKTNWVWYRSNANTNNINPSSSQQVWQIPPEQMLMH 60

Query: 61  GDESPPRSSLVMLRSGR--------NGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFD 120
               P + SL +    +        +     ISC+DCGNQAKKDC HMRCRTCCKSRGFD
Sbjct: 61  HHSHPQQQSLDLYPGHQIDVSDLATSSRSITISCRDCGNQAKKDCTHMRCRTCCKSRGFD 120

Query: 121 CETHVKSTWVPASKRRER----HLRSD---------------ATNLKRPRDNT------- 180
           C THV+STW+P ++RRER    H+ +                ++  KR RD T       
Sbjct: 121 CSTHVRSTWIPVARRRERQQQLHMSTSGGGGGSGSGGAGGGGSSIPKRHRDPTLPGTSSS 180

Query: 181 ----AASSGLEMG--NFPMEVSSTAVFRCVRMTTLDETND-QFAYQTAVNIGGHTFKGIL 240
               + S+GLEMG  +FP EVSS A+FRCV+M+ +D+  D Q+AYQT VNIGGH FKGIL
Sbjct: 181 SRLPSHSAGLEMGEASFPGEVSSDALFRCVKMSGVDDGGDGQYAYQTTVNIGGHLFKGIL 240

Query: 241 YDHGPEQQQQ------PPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPP---YP 262
           YD GPE               +SA   GG      P  T     +S+A+   P     Y 
Sbjct: 241 YDQGPESSYMSGGSGGSDHQSSSAGGGGGGHPFNPPVVTDGGGGVSSAMFVDPNSGGYYS 300

[Close]

BLAST of CmaCh04G007690 vs. Swiss-Prot
Match: SRS7_ARATH (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=SRS7 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 4.7e-39
Identity = 107/250 (42.80%), Postives = 137/250 (54.80%), Query Frame = 1


Query: 56  DESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTW 115
           D  P RSS       R G    ++CQDCGNQAKKDC HMRCRTCCKSRGFDC+THVKSTW
Sbjct: 98  DHEPVRSSTGGFTVTRQGN---MNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTW 157

Query: 116 VPASKRRER----------HLRS--------DATNLKRPRDN---------------TAA 175
           V A+KRRER           +R         D  + K    N                A+
Sbjct: 158 VSAAKRRERQAQLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNAS 217

Query: 176 SSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQ 235
           SSGLE  + P E+SS AVFRC+R++++D+ ++++AYQTAV+IGGH FKGILYD GP    
Sbjct: 218 SSGLETSHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDH 277

Query: 236 QPPPPPNSASPDGGA-------LLITAPT--TTMELPPISA--ALLDPPPPYPA---PLN 259
                  S+S +G         L+ + P+  TT  +  ++     +DP   Y A   P N
Sbjct: 278 H----RYSSSLNGETSHQHHLNLMDSTPSAATTNAVTAVNTNNGSIDPSSLYTAVATPFN 337

[Close]

BLAST of CmaCh04G007690 vs. TrEMBL
Match: A0A0A0KUG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G043960 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.8e-98
Identity = 192/287 (66.90%), Postives = 211/287 (73.52%), Query Frame = 1


Query: 1   MAGFFPL----GGGREPNYHLPTTTT--------TDGLFWYRNYESLGIW-------QQQ 60
           MAGFFPL     GGR PNYH PT TT        T+GLFWY+NYE L  W       QQQ
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQ 60

Query: 61  QVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGG---QVISCQDCGNQAKKDCLHMRCRT 120
             Q+Q GEGFVYSGDESP RSSLVM+RSGR GGG    V SCQDCGNQAKKDC+HMRCRT
Sbjct: 61  PAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCRT 120

Query: 121 CCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDN--TAASSGLEMGNFPMEVS 180
           CCKSRGF+CETHVKSTWVPASKRR+RHLRSD  N KRP+D      SSGL+MGNFP EV+
Sbjct: 121 CCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVT 180

Query: 181 STAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGG 240
           + AVFRCVRMT+LDET+DQ+AYQTAVNIGG  FKGILYDHGPE   QPPPPP+S+     
Sbjct: 181 TPAVFRCVRMTSLDETDDQYAYQTAVNIGGRIFKGILYDHGPE---QPPPPPSSS----- 240

Query: 241 ALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS 264
                           SAALLDP PPYP PL+TY+ AGTQFFLPP+S
Sbjct: 241 ----------------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS 263

[Close]

BLAST of CmaCh04G007690 vs. TrEMBL
Match: B9T5Y4_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_0415480 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 4.0e-61
Identity = 158/353 (44.76%), Postives = 186/353 (52.69%), Query Frame = 1


Query: 1   MAGFFPLGGG-------REPNYHL------PTTTTTDGLFWYRN----YESLGIWQQQQV 60
           MAG F LGGG        +   H       PT    +  FWY+N    Y+   +WQQQQ 
Sbjct: 1   MAGLFSLGGGGGRGSNQEDDQQHNNNPPPPPTEIPQESWFWYKNEDVPYKGFELWQQQQQ 60

Query: 61  QQQ-------------------AGEGF------VYSGDESPPRSSLVMLRSGRNGGGQVI 120
           QQQ                   AG G       +   DES  RS+ +M+RS  + GG  +
Sbjct: 61  QQQEFFRHQSLQQQQQDLYSSAAGLGVGPSRSSINFSDESSSRSAFMMMRS--SSGGSSM 120

Query: 121 SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRER-------------- 180
           SCQDCGNQAKKDC+HMRCRTCCKSRGFDC+THVKSTWVPASKRRER              
Sbjct: 121 SCQDCGNQAKKDCVHMRCRTCCKSRGFDCQTHVKSTWVPASKRRERQQQLVAIQQQQHQQ 180

Query: 181 --HLRSDATNLKRPRDNTAA----------------SSGLEMGNFPMEVSSTAVFRCVRM 240
               +    N KR R+N  +                SSGLE+GNFP EVSS AVFRCV++
Sbjct: 181 QQQQQQQQQNPKRLRENPTSSSLACTPATNTRLPNNSSGLELGNFPSEVSSPAVFRCVKV 240

Query: 241 TTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGAL----LITA 264
           + +DE +DQ+AYQTAVNIGGH FKGILYDHGPE    P    +S    GG L    LITA
Sbjct: 241 SGIDENDDQYAYQTAVNIGGHVFKGILYDHGPESTYMPAAETSSGGGSGGGLQPLNLITA 300

[Close]

BLAST of CmaCh04G007690 vs. TrEMBL
Match: U5G8I9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s13610g PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 7.5e-60
Identity = 154/333 (46.25%), Postives = 190/333 (57.06%), Query Frame = 1


Query: 1   MAGFFPLGGG---------REPNYHLPTTTTTDGLFWYRN----YESLGIWQQQQVQ--- 60
           MAG F LG G         ++ N + PT    +  FWY++    Y+S  +WQQQ  +   
Sbjct: 1   MAGLFSLGRGSSSSNNQEDQQNNNNPPTEIPQESWFWYKSEDIPYKSFELWQQQHQELLH 60

Query: 61  --QQAGEGFVYS----------------GDESPPRSS-----LVMLRSGRNGGGQV--IS 120
              Q  +  +YS                 DES  RS+      +M+R G +G G    IS
Sbjct: 61  QRHQNPQQDLYSPAVGLGVGPSRTSINISDESSSRSAAAAEAFMMMRPGGSGTGGAGSIS 120

Query: 121 CQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRER-----------HLRS 180
           CQDCGNQAKKDC+HMRCRTCCKSRGF+C+THVKSTWVPASKRRER            L+ 
Sbjct: 121 CQDCGNQAKKDCIHMRCRTCCKSRGFECQTHVKSTWVPASKRRERQQQLNLLQQQQQLQI 180

Query: 181 DATNLKRPRDNTAAS----------SGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAY 240
              N KR R+N ++S          SGLE+GNFP EVSS A+FRCVR++ +DE+ +  AY
Sbjct: 181 RGENPKRQRENPSSSLACTRLANSMSGLELGNFPSEVSSPALFRCVRVSGIDESEEMLAY 240

Query: 241 QTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGAL----LITAPTTT----MELP 264
           QTAVNIGGH FKGILYDHGP+        P   S  GG +    LITA T T    + + 
Sbjct: 241 QTAVNIGGHVFKGILYDHGPDSNYM---APGETSSGGGGVQPLNLITAGTATGGGGVTVA 300

[Close]

BLAST of CmaCh04G007690 vs. TrEMBL
Match: A0A0D2QE61_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G011800 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 7.0e-58
Identity = 140/294 (47.62%), Postives = 171/294 (58.16%), Query Frame = 1


Query: 1   MAGFFPLGGGREPNYHLPTTTTTDGLFWYRN----YESLGIWQQQQVQQQAGEGFVYS-- 60
           MAGFF  G  ++ N + P T  T+  FW RN    Y+   +WQQQQ Q+Q  +  +Y   
Sbjct: 1   MAGFFLRGQDQQDN-NSPPTDQTENWFWCRNEDIPYKGFELWQQQQQQEQQQQQHIYMSG 60

Query: 61  ---GDESPPRSSLVMLRSGRN-------GGGQV--ISCQDCGNQAKKDCLHMRCRTCCKS 120
              G  S   S+ +M+ SG         GGG    ISCQDCGNQAKKDC HMRCRTCCKS
Sbjct: 61  LGVGGPSRGSSNFMMMTSGGGNDGGGGGGGGNTSGISCQDCGNQAKKDCPHMRCRTCCKS 120

Query: 121 RGFDCETHVKSTWVPASKRRERHLRSD-------------ATNLKRPRDNTAASSGLEMG 180
           RGFDC+THVKSTWVPAS+RRER  +               A   KR R+N    +GLE+G
Sbjct: 121 RGFDCQTHVKSTWVPASRRRERQQQQQQLVSPQQHQQIIRAEQSKRHREN---PTGLELG 180

Query: 181 NFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPN 240
           NFP E+SS AVFRCVR++ +++ +DQ+AYQTAVNIGGH FKGILY  GPE          
Sbjct: 181 NFPAELSSEAVFRCVRVSNVEDADDQYAYQTAVNIGGHVFKGILYSQGPETNYDMAGAAT 240

Query: 241 SASPDGGALLITAPTTTM--ELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPP 262
           + +   G +  TA TT      P  +   +DP   YP  LNT   AGTQFF  P
Sbjct: 241 TTTTTAGGVAATAATTASGGASPSSTTPFIDPSSLYPT-LNTNFMAGTQFFPNP 289

[Close]

BLAST of CmaCh04G007690 vs. TrEMBL
Match: A0A067K8V2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13664 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.2e-57
Identity = 157/350 (44.86%), Postives = 187/350 (53.43%), Query Frame = 1


Query: 1   MAGFFPLGGGR-----------EPNYHLPTTTTTDGLFWYRNYE------SLGIWQQQQV 60
           MAG F LGGG            + N + PT    +  FWY+N +      +  +WQQQ+ 
Sbjct: 1   MAGLFSLGGGGGGGGRGSNQDDQHNNNPPTEIPQESWFWYKNEDIPYKGTTFELWQQQEF 60

Query: 61  ----------QQQ------AGEGF------VYSGDESPPRSSLVMLRS-----GRNGGGQ 120
                     Q Q      AG G       +   DES  RS+ +M+RS     G +GG  
Sbjct: 61  LHHRHHQHHHQNQDLYSSAAGLGVGPSRSSINVSDESSSRSAFMMMRSVSGAGGGSGGAG 120

Query: 121 VISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRER------------ 180
            +SCQDCGNQAKKDC+HMRCRTCCKSRGFDC+THVKSTWVPASKRRER            
Sbjct: 121 GMSCQDCGNQAKKDCMHMRCRTCCKSRGFDCQTHVKSTWVPASKRRERQQLAALQQQQQQ 180

Query: 181 -HLRSDATNLKRPRDNTAASS------------GLEMGNFPMEVSSTAVFRCVRMTTLDE 240
             LR D  N KR R+N  +SS            GL++GNFP EVSS A FRCVR++ +DE
Sbjct: 181 LQLRGD-QNPKRHRENPTSSSLACTRLPSNNTTGLDVGNFPAEVSSPATFRCVRVSGIDE 240

Query: 241 TNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGAL---LITAPTTTME 264
            +DQ+AYQTAVNIGGH FKGILYDHG E    P    +S     G     LITA T +  
Sbjct: 241 NDDQYAYQTAVNIGGHVFKGILYDHGSESSYIPAGESSSGGGSVGVQPLNLITAGTVSAS 300

[Close]

BLAST of CmaCh04G007690 vs. TAIR10
Match: AT5G66350.1 (AT5G66350.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 198.0 bits (502), Expect = 7.4e-51
Identity = 136/338 (40.24%), Postives = 179/338 (52.96%), Query Frame = 1


Query: 1   MAGFFPLG---GGREPNYHL-----PTTTTTDGLFWYRNYES--------------LGIW 60
           MAGFF LG   GG  P+ H      P+++ T+   W RN  S              L +W
Sbjct: 1   MAGFFSLGHGGGGNTPDNHRTNTNNPSSSGTESWLWCRNPNSNADGGEAGPSYKGTLELW 60

Query: 61  Q---------QQQVQQQ---------AGEGFVYSGDESPPRS--SLVMLRSGRNGGGQVI 120
           Q         QQQ QQQ         AG G   S       S  +L+M+RSG   GG   
Sbjct: 61  QHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGGP-- 120

Query: 121 SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRER-------------- 180
           SCQDCGNQ+KKDC HMRCRTCCKSRG DC THVKSTWVPA+KRRER              
Sbjct: 121 SCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQLG 180

Query: 181 ---------HLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQ 240
                     + + +T++   R  +  +SGLE+GNFP EVSS+AVFRCVR++++D+  ++
Sbjct: 181 GSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDEEEE 240

Query: 241 FAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGA----LLITAPTTTMELPP 259
           +AY+TAV+IGGH FKG+LYD GP ++         +S  GG+    L+   P+ +   P 
Sbjct: 241 YAYKTAVSIGGHVFKGVLYDQGPAER---------SSSGGGSQPLNLITAGPSASSSSPN 300

[Close]

BLAST of CmaCh04G007690 vs. TAIR10
Match: AT3G51060.1 (AT3G51060.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 197.6 bits (501), Expect = 9.6e-51
Identity = 150/371 (40.43%), Postives = 187/371 (50.40%), Query Frame = 1


Query: 1   MAGFFPL--------GGGREPNYHLPTTT----TTDGLFWYRNYE--------------- 60
           MAGFF L        GGG     H   T      ++   WYRN                 
Sbjct: 1   MAGFFSLDGGGGGGGGGGNNQEDHRSNTNPPPPVSEAWLWYRNPNVNANANTNVNANAPS 60

Query: 61  -------SLGIWQQ----------QQVQQQ-------AGEG--------FVYSGDESPP- 120
                  +L +WQ           QQ QQ+       AG G        F  SG+ S   
Sbjct: 61  SSNAALGTLELWQNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISGETSTAG 120

Query: 121 ---RSSLVMLRSGRNGGGQV-ISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWV 180
               ++++M+RSG +GGG   +SCQDCGNQAKKDC HMRCRTCCKSRGF+C THV+STWV
Sbjct: 121 AGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWV 180

Query: 181 PASKRRERHLR----SDATNL-------KRPRDNTAAS------------SGLEMGNFPM 240
           PA+KRRER  +       T L       KR R+N  A+            SGLE+GNFP 
Sbjct: 181 PAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPA 240

Query: 241 EVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQ----QQPPPPPN 264
           EVSS+AVFRCVR++++++  ++FAYQTAV+IGGH FKGILYD GP               
Sbjct: 241 EVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAAGE 300

[Close]

BLAST of CmaCh04G007690 vs. TAIR10
Match: AT1G75520.1 (AT1G75520.1 SHI-related sequence 5)

HSP 1 Score: 174.5 bits (441), Expect = 8.7e-44
Identity = 129/312 (41.35%), Postives = 156/312 (50.00%), Query Frame = 1


Query: 29  YRNYESLGIW----------QQQQVQQQAGE--------GFVYSGDESP-----PRSSLV 88
           Y N +   IW          QQQQ QQQ           G V SG  S       RS   
Sbjct: 45  YNNNKGFEIWPPQYFQQQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYF 104

Query: 89  MLRSGRNGGGQVIS------CQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPAS 148
            + S    GG  ++      CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+
Sbjct: 105 NVVSDHEPGGFTVTRQGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAA 164

Query: 149 KRRER---------HLRS--DATNLKRPRD--------------------------NTAA 208
           KRRER         H  S  +  N KR R+                          N  +
Sbjct: 165 KRRERLAQLASLQHHSASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANS 224

Query: 209 SSGLEMG-NFPMEVSSTAVFRCVRMTTLDETNDQ--FAYQTAVNIGGHTFKGILYDHGPE 264
           +SGLE+  + P EV+S A+FRCVR+++++E  D   +AYQTAVNIGGH FKGILYD GPE
Sbjct: 225 NSGLEVSQHLPPEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPE 284

[Close]

BLAST of CmaCh04G007690 vs. TAIR10
Match: AT4G36260.1 (AT4G36260.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 163.3 bits (412), Expect = 2.0e-40
Identity = 122/319 (38.24%), Postives = 156/319 (48.90%), Query Frame = 1


Query: 1   MAGFFPLGGGREPNYHLPTTTTTD---GLFWYR---NYESLGIWQQQQVQQQAGEGFVYS 60
           MAG F LGG    N                WYR   N  ++     QQV Q   E  +  
Sbjct: 1   MAGIFSLGGNNNNNGDEEEENQQQQKTNWVWYRSNANTNNINPSSSQQVWQIPPEQMLMH 60

Query: 61  GDESPPRSSLVMLRSGR--------NGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFD 120
               P + SL +    +        +     ISC+DCGNQAKKDC HMRCRTCCKSRGFD
Sbjct: 61  HHSHPQQQSLDLYPGHQIDVSDLATSSRSITISCRDCGNQAKKDCTHMRCRTCCKSRGFD 120

Query: 121 CETHVKSTWVPASKRRER----HLRSD---------------ATNLKRPRDNT------- 180
           C THV+STW+P ++RRER    H+ +                ++  KR RD T       
Sbjct: 121 CSTHVRSTWIPVARRRERQQQLHMSTSGGGGGSGSGGAGGGGSSIPKRHRDPTLPGTSSS 180

Query: 181 ----AASSGLEMG--NFPMEVSSTAVFRCVRMTTLDETND-QFAYQTAVNIGGHTFKGIL 240
               + S+GLEMG  +FP EVSS A+FRCV+M+ +D+  D Q+AYQT VNIGGH FKGIL
Sbjct: 181 SRLPSHSAGLEMGEASFPGEVSSDALFRCVKMSGVDDGGDGQYAYQTTVNIGGHLFKGIL 240

Query: 241 YDHGPEQQQQ------PPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPP---YP 262
           YD GPE               +SA   GG      P  T     +S+A+   P     Y 
Sbjct: 241 YDQGPESSYMSGGSGGSDHQSSSAGGGGGGHPFNPPVVTDGGGGVSSAMFVDPNSGGYYS 300

[Close]

BLAST of CmaCh04G007690 vs. TAIR10
Match: AT1G19790.1 (AT1G19790.1 SHI-related sequence 7)

HSP 1 Score: 162.9 bits (411), Expect = 2.6e-40
Identity = 107/250 (42.80%), Postives = 137/250 (54.80%), Query Frame = 1


Query: 56  DESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTW 115
           D  P RSS       R G    ++CQDCGNQAKKDC HMRCRTCCKSRGFDC+THVKSTW
Sbjct: 98  DHEPVRSSTGGFTVTRQGN---MNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTW 157

Query: 116 VPASKRRER----------HLRS--------DATNLKRPRDN---------------TAA 175
           V A+KRRER           +R         D  + K    N                A+
Sbjct: 158 VSAAKRRERQAQLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNAS 217

Query: 176 SSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQ 235
           SSGLE  + P E+SS AVFRC+R++++D+ ++++AYQTAV+IGGH FKGILYD GP    
Sbjct: 218 SSGLETSHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDH 277

Query: 236 QPPPPPNSASPDGGA-------LLITAPT--TTMELPPISA--ALLDPPPPYPA---PLN 259
                  S+S +G         L+ + P+  TT  +  ++     +DP   Y A   P N
Sbjct: 278 H----RYSSSLNGETSHQHHLNLMDSTPSAATTNAVTAVNTNNGSIDPSSLYTAVATPFN 337

[Close]

BLAST of CmaCh04G007690 vs. NCBI nr
Match: gi|449457620|ref|XP_004146546.1| (PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis sativus])

HSP 1 Score: 367.1 bits (941), Expect = 2.6e-98
Identity = 192/287 (66.90%), Postives = 211/287 (73.52%), Query Frame = 1


Query: 1   MAGFFPL----GGGREPNYHLPTTTT--------TDGLFWYRNYESLGIW-------QQQ 60
           MAGFFPL     GGR PNYH PT TT        T+GLFWY+NYE L  W       QQQ
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQ 60

Query: 61  QVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGG---QVISCQDCGNQAKKDCLHMRCRT 120
             Q+Q GEGFVYSGDESP RSSLVM+RSGR GGG    V SCQDCGNQAKKDC+HMRCRT
Sbjct: 61  PAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCRT 120

Query: 121 CCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDN--TAASSGLEMGNFPMEVS 180
           CCKSRGF+CETHVKSTWVPASKRR+RHLRSD  N KRP+D      SSGL+MGNFP EV+
Sbjct: 121 CCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVT 180

Query: 181 STAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGG 240
           + AVFRCVRMT+LDET+DQ+AYQTAVNIGG  FKGILYDHGPE   QPPPPP+S+     
Sbjct: 181 TPAVFRCVRMTSLDETDDQYAYQTAVNIGGRIFKGILYDHGPE---QPPPPPSSS----- 240

Query: 241 ALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS 264
                           SAALLDP PPYP PL+TY+ AGTQFFLPP+S
Sbjct: 241 ----------------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS 263

[Close]

BLAST of CmaCh04G007690 vs. NCBI nr
Match: gi|659131063|ref|XP_008465489.1| (PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis melo])

HSP 1 Score: 364.4 bits (934), Expect = 1.7e-97
Identity = 192/288 (66.67%), Postives = 211/288 (73.26%), Query Frame = 1


Query: 1   MAGFFPL----GGGREPNYHLPTTTT--------TDGLFWYRNYESLGIW--------QQ 60
           MAGFFPL     GGR PNYH PT TT        T+GLFWY+NYE L  W        QQ
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQ 60

Query: 61  QQVQQQAGEGFVYSGDESPPRSSLVMLRSGR---NGGGQVISCQDCGNQAKKDCLHMRCR 120
           Q  Q+Q GEGFVYSGDESP RSSLVM+RSGR   +GGG V SCQDCGNQAKKDC HMRCR
Sbjct: 61  QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCR 120

Query: 121 TCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDN--TAASSGLEMGNFPMEV 180
           TCCKSRGF+CETHVKSTWVPASKRR+R LRSD  N KRP+D      SSGL+M NFPMEV
Sbjct: 121 TCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEV 180

Query: 181 SSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDG 240
           ++ AVFRCVRMTTLDET+DQ+AYQTAVNIGGH FKGILYDHGPE   QPPPPP+S+S   
Sbjct: 181 TTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPE---QPPPPPSSSS--- 240

Query: 241 GALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS 264
                            +AALLD  PPYP PL+TY+ AGTQFFLPP+S
Sbjct: 241 -----------------AAALLDSTPPYPTPLSTYITAGTQFFLPPSS 265

[Close]

BLAST of CmaCh04G007690 vs. NCBI nr
Match: gi|223526448|gb|EEF28724.1| (transcription factor, putative [Ricinus communis])

HSP 1 Score: 243.0 bits (619), Expect = 5.7e-61
Identity = 158/353 (44.76%), Postives = 186/353 (52.69%), Query Frame = 1


Query: 1   MAGFFPLGGG-------REPNYHL------PTTTTTDGLFWYRN----YESLGIWQQQQV 60
           MAG F LGGG        +   H       PT    +  FWY+N    Y+   +WQQQQ 
Sbjct: 1   MAGLFSLGGGGGRGSNQEDDQQHNNNPPPPPTEIPQESWFWYKNEDVPYKGFELWQQQQQ 60

Query: 61  QQQ-------------------AGEGF------VYSGDESPPRSSLVMLRSGRNGGGQVI 120
           QQQ                   AG G       +   DES  RS+ +M+RS  + GG  +
Sbjct: 61  QQQEFFRHQSLQQQQQDLYSSAAGLGVGPSRSSINFSDESSSRSAFMMMRS--SSGGSSM 120

Query: 121 SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRER-------------- 180
           SCQDCGNQAKKDC+HMRCRTCCKSRGFDC+THVKSTWVPASKRRER              
Sbjct: 121 SCQDCGNQAKKDCVHMRCRTCCKSRGFDCQTHVKSTWVPASKRRERQQQLVAIQQQQHQQ 180

Query: 181 --HLRSDATNLKRPRDNTAA----------------SSGLEMGNFPMEVSSTAVFRCVRM 240
               +    N KR R+N  +                SSGLE+GNFP EVSS AVFRCV++
Sbjct: 181 QQQQQQQQQNPKRLRENPTSSSLACTPATNTRLPNNSSGLELGNFPSEVSSPAVFRCVKV 240

Query: 241 TTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGAL----LITA 264
           + +DE +DQ+AYQTAVNIGGH FKGILYDHGPE    P    +S    GG L    LITA
Sbjct: 241 SGIDENDDQYAYQTAVNIGGHVFKGILYDHGPESTYMPAAETSSGGGSGGGLQPLNLITA 300

[Close]

BLAST of CmaCh04G007690 vs. NCBI nr
Match: gi|743839240|ref|XP_011025892.1| (PREDICTED: protein SHI RELATED SEQUENCE 1-like [Populus euphratica])

HSP 1 Score: 241.9 bits (616), Expect = 1.3e-60
Identity = 156/334 (46.71%), Postives = 192/334 (57.49%), Query Frame = 1


Query: 1   MAGFFPLGGG---------REPNYHLPTTTTTDGLFWYRN----YESLGIWQQQQVQQ-- 60
           MAG F LG G         ++ N + PT    +  FWY++    Y+S  +WQQQQ Q+  
Sbjct: 1   MAGLFSLGRGSSSSNNQEDQQNNNNPPTEIPQESWFWYKSEDIPYKSFELWQQQQHQELL 60

Query: 61  ----QAGEGFVYSG----------------DESPPRSS-----LVMLRSGRNGGGQV--I 120
               Q  +  +YS                 DES  RS+      +M+R G +G G    I
Sbjct: 61  HQRHQNPQQDLYSSAAGLGVGPSRTSINISDESSSRSAAAAEAFMMMRPGGSGTGGAGSI 120

Query: 121 SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRER-----------HLR 180
           SCQDCGNQAKKDC+HMRCRTCCKSRGF+C+THVKSTWVPASKRRER            L+
Sbjct: 121 SCQDCGNQAKKDCMHMRCRTCCKSRGFECQTHVKSTWVPASKRRERQQQLNLLQQQQQLQ 180

Query: 181 SDATNLKRPRDNTAAS----------SGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFA 240
               N KR R+N ++S          SGLE+GNFP EVSS A+FRCVR++ +DE+ +  A
Sbjct: 181 IRGENPKRQRENPSSSLACTRLANSMSGLELGNFPSEVSSPALFRCVRVSGIDESEEMLA 240

Query: 241 YQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGAL----LITAPTTT----MEL 264
           YQTAVNIGGH FKGILYDHGP+        P   S  GG +    LITA T T    + +
Sbjct: 241 YQTAVNIGGHVFKGILYDHGPDSNYM---APGETSSGGGGVQPLNLITAGTATGGGGVTV 300

[Close]

BLAST of CmaCh04G007690 vs. NCBI nr
Match: gi|1000938729|ref|XP_015583530.1| (PREDICTED: protein SHORT INTERNODES isoform X1 [Ricinus communis])

HSP 1 Score: 240.4 bits (612), Expect = 3.7e-60
Identity = 154/347 (44.38%), Postives = 182/347 (52.45%), Query Frame = 1


Query: 1   MAGFFPLGGG-------REPNYHL------PTTTTTDGLFWYRN----YESLGIWQQQQV 60
           MAG F LGGG        +   H       PT    +  FWY+N    Y+   +WQQQQ 
Sbjct: 1   MAGLFSLGGGGGRGSNQEDDQQHNNNPPPPPTEIPQESWFWYKNEDVPYKGFELWQQQQQ 60

Query: 61  QQQ-------------------AGEGF------VYSGDESPPRSSLVMLRSGRNGGGQVI 120
           QQQ                   AG G       +   DES  RS+ +M+RS  + GG  +
Sbjct: 61  QQQEFFRHQSLQQQQQDLYSSAAGLGVGPSRSSINFSDESSSRSAFMMMRS--SSGGSSM 120

Query: 121 SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRER-------------- 180
           SCQDCGNQAKKDC+HMRCRTCCKSRGFDC+THVKSTWVPASKRRER              
Sbjct: 121 SCQDCGNQAKKDCVHMRCRTCCKSRGFDCQTHVKSTWVPASKRRERQQQLVAIQQQQHQQ 180

Query: 181 --HLRSDATNLKRPRDNTAA----------------SSGLEMGNFPMEVSSTAVFRCVRM 240
               +    N KR R+N  +                SSGLE+GNFP EVSS AVFRCV++
Sbjct: 181 QQQQQQQQQNPKRLRENPTSSSLACTPATNTRLPNNSSGLELGNFPSEVSSPAVFRCVKV 240

Query: 241 TTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGAL----LITA 258
           + +DE +DQ+AYQTAVNIGGH FKGILYDHGPE    P    +S    GG L    LITA
Sbjct: 241 SGIDENDDQYAYQTAVNIGGHVFKGILYDHGPESTYMPAAETSSGGGSGGGLQPLNLITA 300

The following BLAST results are available for this feature:

BLAST of CmaCh04G007690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SHI_ARATH	1.3e-49	40.24	Protein SHORT INTERNODES OS=Arabidopsis thaliana GN=SHI PE=1 SV=1	[more]
SRS1_ARATH	1.7e-49	40.43	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=SRS1 PE=1 SV=2	[more]
SRS5_ARATH	1.6e-42	41.35	Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=SRS5 PE=2 SV=1	[more]
SRS2_ARATH	3.6e-39	38.24	Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=SRS2 PE=2 SV=1	[more]
SRS7_ARATH	4.7e-39	42.80	Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=SRS7 PE=2 SV=1	[more]

BLAST of CmaCh04G007690 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUG2_CUCSA	1.8e-98	66.90	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G043960 PE=4 SV=1	[more]
B9T5Y4_RICCO	4.0e-61	44.76	Transcription factor, putative OS=Ricinus communis GN=RCOM_0415480 PE=4 SV=1	[more]
U5G8I9_POPTR	7.5e-60	46.25	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s13610g PE=4 SV=1	[more]
A0A0D2QE61_GOSRA	7.0e-58	47.62	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G011800 PE=4 SV=1	[more]
A0A067K8V2_JATCU	1.2e-57	44.86	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13664 PE=4 SV=1	[more]

BLAST of CmaCh04G007690 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G66350.1	7.4e-51	40.24	Lateral root primordium (LRP) protein-related	[more]
AT3G51060.1	9.6e-51	40.43	Lateral root primordium (LRP) protein-related	[more]
AT1G75520.1	8.7e-44	41.35	SHI-related sequence 5	[more]
AT4G36260.1	2.0e-40	38.24	Lateral root primordium (LRP) protein-related	[more]
AT1G19790.1	2.6e-40	42.80	SHI-related sequence 7	[more]

BLAST of CmaCh04G007690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457620\|ref\|XP_004146546.1\|	2.6e-98	66.90	PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis sativus]	[more]
gi\|659131063\|ref\|XP_008465489.1\|	1.7e-97	66.67	PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis melo]	[more]
gi\|223526448\|gb\|EEF28724.1\|	5.7e-61	44.76	transcription factor, putative [Ricinus communis]	[more]
gi\|743839240\|ref\|XP_011025892.1\|	1.3e-60	46.71	PREDICTED: protein SHI RELATED SEQUENCE 1-like [Populus euphratica]	[more]
gi\|1000938729\|ref\|XP_015583530.1\|	3.7e-60	44.38	PREDICTED: protein SHORT INTERNODES isoform X1 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006510	Znf_LRP1
IPR006511	SHI_C
IPR007818	SHI

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G007690.1	CmaCh04G007690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAMs	TIGR01623	TIGR01623	coord: 79..121 score: 3.8
IPR006511	Lateral Root Primordium type 1, C-terminal	TIGRFAMs	TIGR01624	TIGR01624	coord: 151..198 score: 1.9
IPR007818	Protein of unknown function DUF702	PFAM	PF05142	DUF702	coord: 78..199 score: 8.3
None	No IPR available	PANTHER	PTHR31604	FAMILY NOT NAMED	coord: 1..263 score: 3.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G007690	Cucsa.201140	Cucumber (Gy14) v1	cgycmaB0596
CmaCh04G007690	Cla014559	Watermelon (97103) v1	cmawmB677
CmaCh04G007690	Csa4G043960	Cucumber (Chinese Long) v2	cmacuB713
CmaCh04G007690	ClCG07G008820	Watermelon (Charleston Gray)	cmawcgB668
CmaCh04G007690	CSPI04G05220	Wild cucumber (PI 183967)	cmacpiB721
CmaCh04G007690	CmoCh16G006990	Cucurbita moschata (Rifu)	cmacmoB700
CmaCh04G007690	Lsi07G002300	Bottle gourd (USVL1VR-Ls)	cmalsiB698
CmaCh04G007690	Cp4.1LG14g01720	Cucurbita pepo (Zucchini)	cmacpeB714
CmaCh04G007690	Cp4.1LG01g06910	Cucurbita pepo (Zucchini)	cmacpeB731
CmaCh04G007690	CsaV3_4G005360	Cucumber (Chinese Long) v3	cmacucB0847
CmaCh04G007690	Cla97C07G135860	Watermelon (97103) v2	cmawmbB774
CmaCh04G007690	Bhi01G001886	Wax gourd	cmawgoB0846
CmaCh04G007690	CsGy4G005130	Cucumber (Gy14) v2	cgybcmaB547
CmaCh04G007690	Carg14168	Silver-seed gourd	carcmaB1288
CmaCh04G007690	Carg05760	Silver-seed gourd	carcmaB1414

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G007690	CmaCh16G006400	Cucurbita maxima (Rimu)	cmacmaB350

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G007690	Melon (DHL92) v3.6.1	cmamedB782
CmaCh04G007690	Watermelon (97103) v2	cmawmbB712
CmaCh04G007690	Cucurbita maxima (Rimu)	cmacmaB546
CmaCh04G007690	Cucurbita moschata (Rifu)	cmacmoB727
CmaCh04G007690	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G007690	Wild cucumber (PI 183967)	cmacpiB785
CmaCh04G007690	Melon (DHL92) v3.5.1	cmameB694
CmaCh04G007690	Melon (DHL92) v3.5.1	cmameB710
CmaCh04G007690	Watermelon (Charleston Gray)	cmawcgB639
CmaCh04G007690	Watermelon (97103) v1	cmawmB715
CmaCh04G007690	Cucurbita pepo (Zucchini)	cmacpeB702
CmaCh04G007690	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G007690	Cucurbita pepo (Zucchini)	cmacpeB741