Cp4.1LG12g05650 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g05650
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionIndole-3-acetic acid-induced protein ARG2
LocationCp4.1LG12 : 7960110 .. 7961482 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATAAACCTCCTCTCTTCCACTTCTTCTTCACTCGTCTCCACTTACAAAAAAGAAACTGCTCCATTTTTACAAGTTCTCTTACAGGTTTCTCTTCCGCTGTTGTGGAGGATTTTCTCGAGAAACAAACAACGTTGAAGAATCTTGTTCCGAGAAGATCTCTCCACCAACAGCGCTTTGAGTTTATATTGATTTCTTGCTTTTATATTCAGCTTCCAATGGCTCGCTCTTTCTCCAACGTTAAGGTCCTATCCGCTCTCGTTGCCGATGGATTCTCTTCCGCTCTCAGCAGGTGCTTCTTCTTCTTCTTTTTCTCCGTTTTTTCTTGGATCTTTGTCTCGATTGTAGTGTTTTTGATGTTAATATTTGTATGATTGTTGTTTGTATGGTTAGGCGTGGCTACGCGGCGGCGACGGCTTCGCAAGGAGTTGCGTCGAGTGCGGTCAAGGGAGGAAGTGTTGCGGCGGCGAGGAACAGTAATCTGTTGAAGAAATCGGGGGAGGAGAAGGTTGTCGGATCGTCTGAGAAGGTTTCTTGGGTGCCGGATCCTGTCACGGGGTATTACCGGCCGGAGAATCGCGCCGATGAGATAGATGTTGCCGAACTTCGTTCGGTTCTCCTTAATAACAGGAATTAAAGGCGTTTTTCTCGAAATGAATTGAAAGTAAGTTATATTAGAAAACCTAAGAAGATGATCGGATTCTCTGAAGCGAACAGAGGCCTTCGGGCTTCGGATCGAAATCGGAAGAGGATTTGATCGAGCGTGAGTGTGGAATTTATGAAGCAGTTCAGGGATTGAAAACAGGCTCTAGGGCTTCGATCGGCGGCGTTTCCGACTACCGTTCAGATGTTAAGTTTCTTTTATCAATATCACTCTACAATACTCTGTGTTCTAGGATTTTAAATGTTTTCCGTCACTGTAGTAGTATGAATACATGATGAATAAATAGGCACTAGCCTTTGGTTTCTGTTGTTTTGATCTTCAAATTCCTCAAATTCCTGTTATGTGATGAAACAAAAGACAGATGAAAAGGTGGAAGTGAATCGAGCGGTTTAAGCTCTGAAAACACCTCTTTAATGGCGGAAATTTAGGGGACAAGAAATTCAATATGGAAACGCAGTGATAAGAAAAACTAAATTCACGCGGAACCTTCTTGGAGATGAGTGGAAACTTGCATATTCTGAGGTTGTGAAAGAACAGATTCTGTAAGGCCAGTTTTAGAAGGGCGTTTTGATTAATTCTTGTATGATTTGACCTCTTCCAACTGTTTGTGTACTGATGTGCTTTTCATCAATTGGTTGTGTATGATCAGAAGAGAAGTTTCCTTTTGCTTCTCATGCATGTGAGAGAGTTATTGGTAGACCCTTTTCTTTG

mRNA sequence

TATAAACCTCCTCTCTTCCACTTCTTCTTCACTCGTCTCCACTTACAAAAAAGAAACTGCTCCATTTTTACAAGTTCTCTTACAGGTTTCTCTTCCGCTGTTGTGGAGGATTTTCTCGAGAAACAAACAACGTTGAAGAATCTTGTTCCGAGAAGATCTCTCCACCAACAGCGCTTTGAGTTTATATTGATTTCTTGCTTTTATATTCAGCTTCCAATGGCTCGCTCTTTCTCCAACGTTAAGGTCCTATCCGCTCTCGTTGCCGATGGATTCTCTTCCGCTCTCAGCAGGCGTGGCTACGCGGCGGCGACGGCTTCGCAAGGAGTTGCGTCGAGTGCGGTCAAGGGAGGAAGTGTTGCGGCGGCGAGGAACAGTAATCTGTTGAAGAAATCGGGGGAGGAGAAGGTTGTCGGATCGTCTGAGAAGGTTTCTTGGGTGCCGGATCCTGTCACGGGGTATTACCGGCCGGAGAATCGCGCCGATGAGATAGATGTTGCCGAACTTCGTTCGGTTCTCCTTAATAACAGGAATTAAAGGCGTTTTTCTCGAAATGAATTGAAAGTAAGTTATATTAGAAAACCTAAGAAGATGATCGGATTCTCTGAAGCGAACAGAGGCCTTCGGGCTTCGGATCGAAATCGGAAGAGGATTTGATCGAGCGTGAGTGTGGAATTTATGAAGCAGTTCAGGGATTGAAAACAGGCTCTAGGGCTTCGATCGGCGGCGTTTCCGACTACCGTTCAGATGTTAAGTTTCTTTTATCAATATCACTCTACAATACTCTGTGTTCTAGGATTTTAAATGTTTTCCGTCACTGTAGTAGTATGAATACATGATGAATAAATAGGCACTAGCCTTTGGTTTCTGTTGTTTTGATCTTCAAATTCCTCAAATTCCTGTTATGTGATGAAACAAAAGACAGATGAAAAGGTGGAAGTGAATCGAGCGGTTTAAGCTCTGAAAACACCTCTTTAATGGCGGAAATTTAGGGGACAAGAAATTCAATATGGAAACGCAGTGATAAGAAAAACTAAATTCACGCGGAACCTTCTTGGAGATGAGTGGAAACTTGCATATTCTGAGGTTGTGAAAGAACAGATTCTGTAAGGCCAGTTTTAGAAGGGCGTTTTGATTAATTCTTGTATGATTTGACCTCTTCCAACTGTTTGTGTACTGATGTGCTTTTCATCAATTGGTTGTGTATGATCAGAAGAGAAGTTTCCTTTTGCTTCTCATGCATGTGAGAGAGTTATTGGTAGACCCTTTTCTTTG

Coding sequence (CDS)

ATGGCTCGCTCTTTCTCCAACGTTAAGGTCCTATCCGCTCTCGTTGCCGATGGATTCTCTTCCGCTCTCAGCAGGCGTGGCTACGCGGCGGCGACGGCTTCGCAAGGAGTTGCGTCGAGTGCGGTCAAGGGAGGAAGTGTTGCGGCGGCGAGGAACAGTAATCTGTTGAAGAAATCGGGGGAGGAGAAGGTTGTCGGATCGTCTGAGAAGGTTTCTTGGGTGCCGGATCCTGTCACGGGGTATTACCGGCCGGAGAATCGCGCCGATGAGATAGATGTTGCCGAACTTCGTTCGGTTCTCCTTAATAACAGGAATTAA

Protein sequence

MARSFSNVKVLSALVADGFSSALSRRGYAAATASQGVASSAVKGGSVAAARNSNLLKKSGEEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNRN
Homology
[Close]
BLAST of Cp4.1LG12g05650 vs. Swiss-Prot
Match: ARG2_VIGRR (Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata GN=ARG2 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.7e-22
Identity = 64/104 (61.54%), Postives = 79/104 (75.96%), Query Frame = 1 

Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAATASQGVASSAVKGGSVAAARNSNLLKKSG 60
           MARSF+NVKVLSALVADGFS+  +R G+AAA A+     SA +GG   A+   N++ KSG
Sbjct: 1   MARSFTNVKVLSALVADGFSNTTTRHGFAAAAAA---TQSATRGG---ASIGGNMVPKSG 60

Query: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNR 105
           EEKV G  EKVSWVPDPVTGYYRPEN  +EIDVA++R+ +L  +
Sbjct: 61  EEKVRG-GEKVSWVPDPVTGYYRPEN-TNEIDVADMRATVLGKK 96

[Close]
BLAST of Cp4.1LG12g05650 vs. Swiss-Prot
Match: SAG21_ARATH (Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana GN=SAG21 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.5e-20
Identity = 59/104 (56.73%), Postives = 78/104 (75.00%), Query Frame = 1 

Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAATASQGVASSAVKGGSVAAARNSNLLKKSG 60
           MARS SNVK++SA V+   S+A+ RRGYAA TA+QG  SS  + G+VA+A    ++KK G
Sbjct: 1   MARSISNVKIVSAFVSRELSNAIFRRGYAA-TAAQGSVSSGGRSGAVASA----VMKKKG 60

Query: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNR 105
            E+   S++K+SWVPDP TGYYRPE  ++EID AELR+ LLNN+
Sbjct: 61  VEE---STQKISWVPDPKTGYYRPETGSNEIDAAELRAALLNNK 96

[Close]
BLAST of Cp4.1LG12g05650 vs. Swiss-Prot
Match: LEA5_CITSI (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.8e-13
Identity = 49/104 (47.12%), Postives = 63/104 (60.58%), Query Frame = 1 

Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAATASQGVASSAVKGGSVAAARNSNLLKKSG 60
           MARS    K+L A VADG S ++SRRGYAAA     ++ + +           N L+ + 
Sbjct: 1   MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLGTISRTGIM--------EKNDLRPAV 60

Query: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNR 105
            E    SS   +W PDP+TGYYRPENRA EID AELR +LLN++
Sbjct: 61  REDSGASS---AWAPDPITGYYRPENRAVEIDPAELREMLLNHK 93

[Close]
BLAST of Cp4.1LG12g05650 vs. Swiss-Prot
Match: LEA5D_GOSHI (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum GN=LEA5-D PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 5.1e-13
Identity = 48/104 (46.15%), Postives = 60/104 (57.69%), Query Frame = 1 

Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAATASQGVASSAVKGGSVAAARNSNLLKKSG 60
           MARS S+ K+L A + DG   ++SRRGY+ A  +   AS    G      R   + + S 
Sbjct: 1   MARSVSSFKLLGASIFDGLYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRDAMKESSS 60

Query: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNR 105
            E    SS   +W PDPVTGYYRPEN   EID AELR +LLN+R
Sbjct: 61  SETRAYSS---AWAPDPVTGYYRPENCGAEIDAAELREMLLNHR 101

[Close]
BLAST of Cp4.1LG12g05650 vs. Swiss-Prot
Match: LEA5A_GOSHI (Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum GN=LEA5-A PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.1e-11
Identity = 46/104 (44.23%), Postives = 58/104 (55.77%), Query Frame = 1 

Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAATASQGVASSAVKGGSVAAARNSNLLKKSG 60
           MARS S+ K L A V D    ++SRRGY+ A  +   AS    G      R   + + S 
Sbjct: 1   MARSVSSFKFLGASVFDALYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRYAMKESSS 60

Query: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNR 105
            E    SS   +W PDPVTGYYRPEN   EID A+LR ++LN+R
Sbjct: 61  SETRAYSS---AWAPDPVTGYYRPENCGAEIDAADLREMMLNHR 101

[Close]
BLAST of Cp4.1LG12g05650 vs. TrEMBL
Match: A0A0A0K996_CUCSA (Protein induced upon tuberization OS=Cucumis sativus GN=Csa_7G398090 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 7.1e-38
Identity = 89/105 (84.76%), Postives = 98/105 (93.33%), Query Frame = 1 

Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAATASQGVASSAVKGGSVAAARNSNLLKKSG 60
           MARSFSN K+LSA+V+DGFSS LS RGYAAA  SQGVASSAVKGGSVAAAR+SNLLKKSG
Sbjct: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVASSAVKGGSVAAARSSNLLKKSG 60

Query: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNRN 106
           EEK VG++EKVSWVPDPVTGYYRPENR+DEIDVAELRS+LL N+N
Sbjct: 61  EEK-VGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLKNKN 104

[Close]
BLAST of Cp4.1LG12g05650 vs. TrEMBL
Match: A0A0B2PM81_GLYSO (Indole-3-acetic acid-induced protein ARG2 OS=Glycine soja GN=glysoja_024586 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-23
Identity = 69/104 (66.35%), Postives = 81/104 (77.88%), Query Frame = 1 

Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAATASQGVASSAVKGGSVAAARNSNLLKKSG 60
           MARSFSNVKVLSALVADGFS+ L+RRGYAAAT       SA +GG  AA+ +S +  KSG
Sbjct: 1   MARSFSNVKVLSALVADGFSNTLTRRGYAAAT------QSATRGG--AASISSKIAPKSG 60

Query: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNR 105
           E+KV G +EKVSWVPDPVTGYY+PEN   EIDVAELR+ +L  +
Sbjct: 61  EDKVGGGAEKVSWVPDPVTGYYKPEN-IKEIDVAELRATVLGKK 95

[Close]
BLAST of Cp4.1LG12g05650 vs. TrEMBL
Match: C6T331_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G017100 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-23
Identity = 69/104 (66.35%), Postives = 81/104 (77.88%), Query Frame = 1 

Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAATASQGVASSAVKGGSVAAARNSNLLKKSG 60
           MARSFSNVKVLSALVADGFS+ L+RRGYAAAT       SA +GG  AA+ +S +  KSG
Sbjct: 1   MARSFSNVKVLSALVADGFSNTLTRRGYAAAT------QSATRGG--AASISSKIAPKSG 60

Query: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNR 105
           E+KV G +EKVSWVPDPVTGYY+PEN   EIDVAELR+ +L  +
Sbjct: 61  EDKVGGGAEKVSWVPDPVTGYYKPEN-IKEIDVAELRATVLGKK 95

[Close]
BLAST of Cp4.1LG12g05650 vs. TrEMBL
Match: M5VQ69_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013814mg PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-23
Identity = 66/101 (65.35%), Postives = 79/101 (78.22%), Query Frame = 1 

Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAATASQGVASSAVKGGSVAAARNSNLLKKSG 60
           MARSFSN K+LSALVADGFSS ++RRGYAA   SQGVASS V+GG      + N++K SG
Sbjct: 1   MARSFSNAKLLSALVADGFSSTITRRGYAAG--SQGVASSVVRGGGATNPTSVNVVKNSG 60

Query: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLL 102
           E+KV  S+ KVSWVP+P TG+Y PEN A+EID AELR+ LL
Sbjct: 61  EDKV-SSASKVSWVPNPKTGFYGPENGAEEIDAAELRAALL 98

[Close]
BLAST of Cp4.1LG12g05650 vs. TrEMBL
Match: W9QFH4_9ROSA (Indole-3-acetic acid-induced protein ARG2 OS=Morus notabilis GN=L484_011104 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 3.8e-23
Identity = 64/101 (63.37%), Postives = 79/101 (78.22%), Query Frame = 1 

Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAATASQGVASSAVKGGSVAAARNSNLLKKSG 60
           MARSFS  K L+ALV DGFS+ ++RRG++AA A QGV SS  + G+ A +R+   +KK  
Sbjct: 1   MARSFSGAKALTALVIDGFSTVITRRGFSAA-APQGVVSSVARAGATAGSRS---VKKKS 60

Query: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLL 102
            EK+VG++EKVSWVPDPVTGYYRPEN A EIDVAELR+ LL
Sbjct: 61  GEKIVGNTEKVSWVPDPVTGYYRPENGAQEIDVAELRATLL 97

[Close]
BLAST of Cp4.1LG12g05650 vs. TAIR10
Match: AT4G02380.1 (AT4G02380.1 senescence-associated gene 21)

HSP 1 Score: 99.4 bits (246), Expect = 1.4e-21
Identity = 59/104 (56.73%), Postives = 78/104 (75.00%), Query Frame = 1 

Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAATASQGVASSAVKGGSVAAARNSNLLKKSG 60
           MARS SNVK++SA V+   S+A+ RRGYAA TA+QG  SS  + G+VA+A    ++KK G
Sbjct: 1   MARSISNVKIVSAFVSRELSNAIFRRGYAA-TAAQGSVSSGGRSGAVASA----VMKKKG 60

Query: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNR 105
            E+   S++K+SWVPDP TGYYRPE  ++EID AELR+ LLNN+
Sbjct: 61  VEE---STQKISWVPDPKTGYYRPETGSNEIDAAELRAALLNNK 96

[Close]
BLAST of Cp4.1LG12g05650 vs. TAIR10
Match: AT1G02820.1 (AT1G02820.1 Late embryogenesis abundant 3 (LEA3) family protein)

HSP 1 Score: 78.2 bits (191), Expect = 3.4e-15
Identity = 51/104 (49.04%), Postives = 69/104 (66.35%), Query Frame = 1 

Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAATASQGVASSAVKGGSVAAARNSNLLKKSG 60
           MARS +N K+ S   ++  S+A+ RRG+AAA      A +A+ G SV+ A    + K++G
Sbjct: 1   MARSLANAKIQSVFGSEKLSNAVFRRGFAAA------AKTALDG-SVSTAE---MKKRAG 60

Query: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNR 105
           E     SSEK  WVPDP TGYYRPE  ++EID AELR++LLNN+
Sbjct: 61  E----ASSEKAPWVPDPKTGYYRPETVSEEIDPAELRAILLNNK 90

[Close]
BLAST of Cp4.1LG12g05650 vs. TAIR10
Match: AT4G15910.1 (AT4G15910.1 drought-induced 21)

HSP 1 Score: 58.5 bits (140), Expect = 2.8e-09
Identity = 41/104 (39.42%), Postives = 57/104 (54.81%), Query Frame = 1 

Query: 2   ARSFSN-VKVLSALVADGFSSALSRRGYAAATASQGVASSAVKGGSVAAARNSNLLKKSG 61
           ARS S  VK L +  +   S ++  R    AT+    A+   KGGS      + ++    
Sbjct: 3   ARSLSGAVKSLCSAASGSLSCSIVLRRSYVATSQNVTAAGLSKGGS------TRVMVGKM 62

Query: 62  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNR 105
           E++ +    + +W PDPVTGYYRP NRA EID AELR +LL N+
Sbjct: 63  EQRGLDQEAESAWGPDPVTGYYRPSNRAAEIDPAELRELLLKNK 100

[Close]
BLAST of Cp4.1LG12g05650 vs. TAIR10
Match: AT3G53770.1 (AT3G53770.1 late embryogenesis abundant 3 (LEA3) family protein)

HSP 1 Score: 48.5 bits (114), Expect = 2.9e-06
Identity = 20/34 (58.82%), Postives = 26/34 (76.47%), Query Frame = 1 

Query: 69  EKVSWVPDPVTGYYRPENRADEIDVAELRSVLLN 103
           E++ W+PDP TGYYRP+N A E+D  ELRS+  N
Sbjct: 82  EELWWMPDPQTGYYRPDNFARELDAVELRSLHFN 115

[Close]
BLAST of Cp4.1LG12g05650 vs. NCBI nr
Match: gi|659101343|ref|XP_008451558.1| (PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Cucumis melo])

HSP 1 Score: 167.9 bits (424), Expect = 9.3e-39
Identity = 89/105 (84.76%), Postives = 97/105 (92.38%), Query Frame = 1 

Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAATASQGVASSAVKGGSVAAARNSNLLKKSG 60
           MARSFSNVK+LSA+V+DGFSS L+ RGYAAA  SQGVASSAVKG  VAAAR+SNLLKKSG
Sbjct: 1   MARSFSNVKILSAVVSDGFSSLLTSRGYAAAAGSQGVASSAVKGAGVAAARSSNLLKKSG 60

Query: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNRN 106
           EEKVVGS+EKVSWVPDPVTGYYRPENR DEIDVAELRS+LL N+N
Sbjct: 61  EEKVVGSTEKVSWVPDPVTGYYRPENRCDEIDVAELRSILLKNKN 105

[Close]
BLAST of Cp4.1LG12g05650 vs. NCBI nr
Match: gi|449436481|ref|XP_004136021.1| (PREDICTED: indole-3-acetic acid-induced protein ARG2 [Cucumis sativus])

HSP 1 Score: 164.5 bits (415), Expect = 1.0e-37
Identity = 89/105 (84.76%), Postives = 98/105 (93.33%), Query Frame = 1 

Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAATASQGVASSAVKGGSVAAARNSNLLKKSG 60
           MARSFSN K+LSA+V+DGFSS LS RGYAAA  SQGVASSAVKGGSVAAAR+SNLLKKSG
Sbjct: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVASSAVKGGSVAAARSSNLLKKSG 60

Query: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNRN 106
           EEK VG++EKVSWVPDPVTGYYRPENR+DEIDVAELRS+LL N+N
Sbjct: 61  EEK-VGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLKNKN 104

[Close]
BLAST of Cp4.1LG12g05650 vs. NCBI nr
Match: gi|1009174807|ref|XP_015868536.1| (PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Ziziphus jujuba])

HSP 1 Score: 128.3 bits (321), Expect = 8.1e-27
Identity = 73/101 (72.28%), Postives = 85/101 (84.16%), Query Frame = 1 

Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAATASQGVASSAVKGGSVAAARNSNLLKKSG 60
           MARSFSN K+LSALV DGFS+A+SRRGYAA  ASQGV SS  +GG+  + R  N++KKSG
Sbjct: 1   MARSFSNAKLLSALVVDGFSTAISRRGYAA--ASQGVVSSVARGGAGGSGR--NVVKKSG 60

Query: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLL 102
           EE +VGS+EKVSW PDPVTGYYRPEN A EIDVAELR++LL
Sbjct: 61  EE-IVGSTEKVSWTPDPVTGYYRPENGAQEIDVAELRAMLL 96

[Close]
BLAST of Cp4.1LG12g05650 vs. NCBI nr
Match: gi|1009181548|ref|XP_015872231.1| (PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Ziziphus jujuba])

HSP 1 Score: 122.5 bits (306), Expect = 4.5e-25
Identity = 73/105 (69.52%), Postives = 85/105 (80.95%), Query Frame = 1 

Query: 1   MARSFSNVKVLSALVADGFSSALS----RRGYAAATASQGVASSAVKGGSVAAARNSNLL 60
           MARSFSN K+LSALV DGFS+A+S    RRGYAA  ASQGV SS  +GG+  + R  N++
Sbjct: 1   MARSFSNAKLLSALVVDGFSTAISSYNNRRGYAA--ASQGVVSSVARGGAGGSGR--NVV 60

Query: 61  KKSGEEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLL 102
           KKSGEE +VGS+EKVSW PDPVTGYYRPEN A EIDVAELR++LL
Sbjct: 61  KKSGEE-IVGSTEKVSWTPDPVTGYYRPENGAQEIDVAELRAMLL 100

[Close]
BLAST of Cp4.1LG12g05650 vs. NCBI nr
Match: gi|658047466|ref|XP_008359415.1| (PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Malus domestica])

HSP 1 Score: 117.1 bits (292), Expect = 1.9e-23
Identity = 66/101 (65.35%), Postives = 77/101 (76.24%), Query Frame = 1 

Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAATASQGVASSAVKGGSVAAARNSNLLKKSG 60
           MARSFSN K LSALV DGFSS++SRRGYAA   SQGVASS V+GG  A  R+ N+ KK+ 
Sbjct: 1   MARSFSNAKFLSALVVDGFSSSISRRGYAAG--SQGVASSVVRGGGAATPRSVNVAKKNS 60

Query: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLL 102
            E+ V S+ KVSWVPDP TG Y PEN A++ID AELR+ LL
Sbjct: 61  GEEKVXSTSKVSWVPDPKTGVYGPENGAEKIDAAELRAALL 99

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g05650 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ARG2_VIGRR2.7e-2261.54Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata GN=ARG2 ... [more]
SAG21_ARATH2.5e-2056.73Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana GN=... [more]
LEA5_CITSI1.8e-1347.12Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1[more]
LEA5D_GOSHI5.1e-1346.15Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum GN=LEA5-D PE=2 ... [more]
LEA5A_GOSHI2.1e-1144.23Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum GN=LEA5-A PE=2 ... [more]
BLAST of Cp4.1LG12g05650 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K996_CUCSA7.1e-3884.76Protein induced upon tuberization OS=Cucumis sativus GN=Csa_7G398090 PE=4 SV=1[more]
A0A0B2PM81_GLYSO2.2e-2366.35Indole-3-acetic acid-induced protein ARG2 OS=Glycine soja GN=glysoja_024586 PE=4... [more]
C6T331_SOYBN2.2e-2366.35Uncharacterized protein OS=Glycine max GN=GLYMA_02G017100 PE=2 SV=1[more]
M5VQ69_PRUPE2.2e-2365.35Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013814mg PE=4 SV=1[more]
W9QFH4_9ROSA3.8e-2363.37Indole-3-acetic acid-induced protein ARG2 OS=Morus notabilis GN=L484_011104 PE=4... [more]
BLAST of Cp4.1LG12g05650 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G02380.11.4e-2156.73 senescence-associated gene 21[more]
AT1G02820.13.4e-1549.04 Late embryogenesis abundant 3 (LEA3) family protein[more]
AT4G15910.12.8e-0939.42 drought-induced 21[more]
AT3G53770.12.9e-0658.82 late embryogenesis abundant 3 (LEA3) family protein[more]
BLAST of Cp4.1LG12g05650 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659101343|ref|XP_008451558.1|9.3e-3984.76PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Cucumis melo][more]
gi|449436481|ref|XP_004136021.1|1.0e-3784.76PREDICTED: indole-3-acetic acid-induced protein ARG2 [Cucumis sativus][more]
gi|1009174807|ref|XP_015868536.1|8.1e-2772.28PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Ziziphus jujuba][more]
gi|1009181548|ref|XP_015872231.1|4.5e-2569.52PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Ziziphus jujuba][more]
gi|658047466|ref|XP_008359415.1|1.9e-2365.35PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
Vocabulary: INTERPRO
TermDefinition
IPR004926LEA_3
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006950 response to stress
biological_process GO:0071229 cellular response to acid chemical
biological_process GO:0071310 cellular response to organic substance
biological_process GO:1901701 cellular response to oxygen-containing compound
biological_process GO:0033554 cellular response to stress
biological_process GO:0006952 defense response
biological_process GO:0009605 response to external stimulus
biological_process GO:0007165 signal transduction
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g05650.1Cp4.1LG12g05650.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004926Late embryogenesis abundant protein, LEA5-typePFAMPF03242LEA_3coord: 1..101
score: 1.9
NoneNo IPR availablePANTHERPTHR33509FAMILY NOT NAMEDcoord: 1..105
score: 4.8
NoneNo IPR availablePANTHERPTHR33509:SF5LATE EMBRYOGENESIS ABUNDANT 3 (LEA3) FAMILY PROTEINcoord: 1..105
score: 4.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g05650Cucsa.097030Cucumber (Gy14) v1cgycpeB0185
Cp4.1LG12g05650Cucsa.205500Cucumber (Gy14) v1cgycpeB0579
Cp4.1LG12g05650CmaCh08G004290Cucurbita maxima (Rimu)cmacpeB902
Cp4.1LG12g05650CmaCh14G009090Cucurbita maxima (Rimu)cmacpeB260
Cp4.1LG12g05650CmaCh17G010820Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g05650CmaCh01G003060Cucurbita maxima (Rimu)cmacpeB465
Cp4.1LG12g05650CmoCh01G003180Cucurbita moschata (Rifu)cmocpeB425
Cp4.1LG12g05650CmoCh17G010560Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g05650CmoCh08G004230Cucurbita moschata (Rifu)cmocpeB839
Cp4.1LG12g05650Cla017401Watermelon (97103) v1cpewmB141
Cp4.1LG12g05650Cla015092Watermelon (97103) v1cpewmB138
Cp4.1LG12g05650Csa4G001850Cucumber (Chinese Long) v2cpecuB139
Cp4.1LG12g05650Csa7G398090Cucumber (Chinese Long) v2cpecuB161
Cp4.1LG12g05650MELO3C017949Melon (DHL92) v3.5.1cpemeB146
Cp4.1LG12g05650MELO3C015995Melon (DHL92) v3.5.1cpemeB118
Cp4.1LG12g05650ClCG09G005640Watermelon (Charleston Gray)cpewcgB132
Cp4.1LG12g05650CSPI07G17540Wild cucumber (PI 183967)cpecpiB163
Cp4.1LG12g05650CSPI04G00910Wild cucumber (PI 183967)cpecpiB141
Cp4.1LG12g05650Lsi03G010810Bottle gourd (USVL1VR-Ls)cpelsiB116
Cp4.1LG12g05650Lsi02G024100Bottle gourd (USVL1VR-Ls)cpelsiB113
Cp4.1LG12g05650MELO3C015995.2Melon (DHL92) v3.6.1cpemedB145
Cp4.1LG12g05650MELO3C017949.2Melon (DHL92) v3.6.1cpemedB172
Cp4.1LG12g05650CsaV3_7G029330Cucumber (Chinese Long) v3cpecucB0188
Cp4.1LG12g05650CsaV3_4G000870Cucumber (Chinese Long) v3cpecucB0162
Cp4.1LG12g05650Bhi09G000723Wax gourdcpewgoB0210
Cp4.1LG12g05650Bhi11G001014Wax gourdcpewgoB0171
Cp4.1LG12g05650CsGy7G015970Cucumber (Gy14) v2cgybcpeB906
Cp4.1LG12g05650Carg11140Silver-seed gourdcarcpeB1143
Cp4.1LG12g05650Carg12096Silver-seed gourdcarcpeB0801
Cp4.1LG12g05650Carg07167Silver-seed gourdcarcpeB0158
Cp4.1LG12g05650Carg07399Silver-seed gourdcarcpeB1070
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g05650Cp4.1LG17g07170Cucurbita pepo (Zucchini)cpecpeB157
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g05650Wax gourdcpewgoB0193
Cp4.1LG12g05650Cucurbita pepo (Zucchini)cpecpeB193
Cp4.1LG12g05650Cucumber (Gy14) v1cgycpeB0669
Cp4.1LG12g05650Cucurbita moschata (Rifu)cmocpeB224
Cp4.1LG12g05650Wild cucumber (PI 183967)cpecpiB140
Cp4.1LG12g05650Watermelon (Charleston Gray)cpewcgB126
Cp4.1LG12g05650Watermelon (Charleston Gray)cpewcgB134
Cp4.1LG12g05650Watermelon (97103) v1cpewmB131
Cp4.1LG12g05650Watermelon (97103) v1cpewmB153
Cp4.1LG12g05650Melon (DHL92) v3.5.1cpemeB144
Cp4.1LG12g05650Cucumber (Gy14) v2cgybcpeB309