CSPI07G17540 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G17540
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Indole-3-acetic acid-induced protein ARG2
Location	Chr7 : 15893320 .. 15894486 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAAAAACGCCTCTATATAAACCCCCCTCTCCCCCGTTCTTCTTCCCTCATCTCCATTTTCAAATAACAAACTTCTCCATTCACCTCAACCCCAACTTCCTTTCTCATTTACCGCTGCTGTGGAGGATTTTCTCCAGAAACTAACAACGTTTCAAGAATCTTTTCTCCACTAGCAGCGTTTTCATATCCAATGGCTCGCTCTTTCTCCAACGCTAAGATCCTCTCCGCTGTTGTTTCTGATGGATTCTCCTCCCTTCTCAGCAGGTAGTTGTAGTTTTTTTCTTTGCTGGATCTCTATGTTTCGATCTATATGTGTTTTTGTTGTTAATGTTCATTTTTATGTGTTTTAGTCGTGGCTATGCGGCGGCAGCGGGTTCTCAAGGAGTTTCGTCCACTGCGGTGAAAGGAGGAAGTGTTGCGGCGGCGAGGAGCAGTAATCTGTTGAAGAAATCTGGAGAAGAGAAGGTTGGAACAACTGAAAAGGTTTCTTGGGTGCCGGATCCTGTCACGGGGTATTACCGACCGGAGAATCGATCCGATGAGATCGATGTTGCCGAACTCCGATCGATTCTTCTTAATAACAAAAACTAAAAGCACTTTTTCCGGAAGGAATTTATATTAAGAAAAAACATAAAACGAAAAGAGACCTCCGGGCTTCGGATCGAGATTGAAAGAGGATTGGATCGGGCTTGAGTGTGGAATATGTGAAGCAATTTGGGGATTAAGAACAGGCTCTACGACGAATAGCAGTTAGAGATTCAACCGACGGTGTGTTCTCAATTCCTGTTTAGATGTTAAGTTTGTTTACTATACTCTGTTCTTTTTAGGAATTTGAATGTTCTTTCGGTTTACTGTAATCTTGAAAAATTGTTACACAATGAATGAATATGGGCAGTAGCCTTTGGTTATTCTGTTGTTGGTTCTTTGGAATTACCTTCTCTTCTTTTTTTTTTCGTGTGATGAAATGAAAGATGAAGCGGAATCAAGATCTGAAAAAGCTCTGCTTTAATGGCGGAAATAGTGGGGATGAGGAATTTAATTTGGGAAAACATAATATATTCTGAGGGTTGTGTTAAGGCAGTTATGGAAACGATGTTTTTGGTTTCTTTCCTAATATGAAACGATTTTTCTGCTTTTTGAACTGTTCATGGGGTTTAGATGGATGGG

mRNA sequence

ATGGCTCGCTCTTTCTCCAACGCTAAGATCCTCTCCGCTGTTGTTTCTGATGGATTCTCCTCCCTTCTCAGCAGTCGTGGCTATGCGGCGGCAGCGGGTTCTCAAGGAGTTTCGTCCACTGCGGTGAAAGGAGGAAGTGTTGCGGCGGCGAGGAGCAGTAATCTGTTGAAGAAATCTGGAGAAGAGAAGGTTGGAACAACTGAAAAGGTTTCTTGGGTGCCGGATCCTGTCACGGGGTATTACCGACCGGAGAATCGATCCGATGAGATCGATGTTGCCGAACTCCGATCGATTCTTCTTAATAACAAAAACTAA

Coding sequence (CDS)

ATGGCTCGCTCTTTCTCCAACGCTAAGATCCTCTCCGCTGTTGTTTCTGATGGATTCTCCTCCCTTCTCAGCAGTCGTGGCTATGCGGCGGCAGCGGGTTCTCAAGGAGTTTCGTCCACTGCGGTGAAAGGAGGAAGTGTTGCGGCGGCGAGGAGCAGTAATCTGTTGAAGAAATCTGGAGAAGAGAAGGTTGGAACAACTGAAAAGGTTTCTTGGGTGCCGGATCCTGTCACGGGGTATTACCGACCGGAGAATCGATCCGATGAGATCGATGTTGCCGAACTCCGATCGATTCTTCTTAATAACAAAAACTAA

Homology

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BLAST of CSPI07G17540 vs. Swiss-Prot
Match: ARG2_VIGRR (Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata GN=ARG2 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.1e-20
Identity = 58/103 (56.31%), Postives = 78/103 (75.73%), Query Frame = 1


Query: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVSSTAVKGGSVAAARSSNLLKKSG 60
           MARSF+N K+LSA+V+DGFS+  +  G+AAAA +   + +A +GG   A+   N++ KSG
Sbjct: 1   MARSFTNVKVLSALVADGFSNTTTRHGFAAAAAA---TQSATRGG---ASIGGNMVPKSG 60

Query: 61  EEKVGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLNNK 104
           EEKV   EKVSWVPDPVTGYYRPEN ++EIDVA++R+ +L  K
Sbjct: 61  EEKVRGGEKVSWVPDPVTGYYRPEN-TNEIDVADMRATVLGKK 96

[Close]

BLAST of CSPI07G17540 vs. Swiss-Prot
Match: SAG21_ARATH (Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana GN=SAG21 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-18
Identity = 58/103 (56.31%), Postives = 74/103 (71.84%), Query Frame = 1


Query: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVSSTAVKGGSVAAARSSNLLKKSG 60
           MARS SN KI+SA VS   S+ +  RGYAA A +QG  S+  + G+VA+A    ++KK G
Sbjct: 1   MARSISNVKIVSAFVSRELSNAIFRRGYAATA-AQGSVSSGGRSGAVASA----VMKKKG 60

Query: 61  EEKVGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLNNK 104
            E+  +T+K+SWVPDP TGYYRPE  S+EID AELR+ LLNNK
Sbjct: 61  VEE--STQKISWVPDPKTGYYRPETGSNEIDAAELRAALLNNK 96

[Close]

BLAST of CSPI07G17540 vs. Swiss-Prot
Match: LEA5_CITSI (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.7e-14
Identity = 50/103 (48.54%), Postives = 63/103 (61.17%), Query Frame = 1


Query: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVSSTAVKGGSVAAARSSNLLKKSG 60
           MARS   AK+L A V+DG S  +S RGYAAAA    +S T +           N L+ + 
Sbjct: 1   MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLGTISRTGIM--------EKNDLRPAV 60

Query: 61  EEKVGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLNNK 104
            E  G +   +W PDP+TGYYRPENR+ EID AELR +LLN+K
Sbjct: 61  REDSGASS--AWAPDPITGYYRPENRAVEIDPAELREMLLNHK 93

[Close]

BLAST of CSPI07G17540 vs. Swiss-Prot
Match: LEA5D_GOSHI (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum GN=LEA5-D PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-10
Identity = 42/103 (40.78%), Postives = 62/103 (60.19%), Query Frame = 1


Query: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVSSTAVKGGSVAAARSSNLLKKSG 60
           MARS S+ K+L A + DG    +S RGY+ A  +  V+++  + G++      + +K+S 
Sbjct: 1   MARSVSSFKLLGASIFDGLYVSISRRGYSGAPPA-AVTASFGRPGAMGKVERRDAMKESS 60

Query: 61  EEKVGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLNNK 104
             +       +W PDPVTGYYRPEN   EID AELR +LLN++
Sbjct: 61  SSETRAYSS-AWAPDPVTGYYRPENCGAEIDAAELREMLLNHR 101

[Close]

BLAST of CSPI07G17540 vs. Swiss-Prot
Match: LEA5A_GOSHI (Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum GN=LEA5-A PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 5.8e-09
Identity = 40/103 (38.83%), Postives = 59/103 (57.28%), Query Frame = 1


Query: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVSSTAVKGGSVAAARSSNLLKKSG 60
           MARS S+ K L A V D     +S RGY+ A  +  V+++  + G++        +K+S 
Sbjct: 1   MARSVSSFKFLGASVFDALYVSISRRGYSGAPPA-AVTASFGRPGAMGKVERRYAMKESS 60

Query: 61  EEKVGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLNNK 104
             +       +W PDPVTGYYRPEN   EID A+LR ++LN++
Sbjct: 61  SSETRAYSS-AWAPDPVTGYYRPENCGAEIDAADLREMMLNHR 101

[Close]

BLAST of CSPI07G17540 vs. TrEMBL
Match: A0A0A0K996_CUCSA (Protein induced upon tuberization OS=Cucumis sativus GN=Csa_7G398090 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.3e-44
Identity = 101/104 (97.12%), Postives = 103/104 (99.04%), Query Frame = 1


Query: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVSSTAVKGGSVAAARSSNLLKKSG 60
           MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGV+S+AVKGGSVAAARSSNLLKKSG
Sbjct: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVASSAVKGGSVAAARSSNLLKKSG 60

Query: 61  EEKVGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLNNKN 105
           EEKVGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILL NKN
Sbjct: 61  EEKVGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLKNKN 104

[Close]

BLAST of CSPI07G17540 vs. TrEMBL
Match: A0A059AX49_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01104 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.3e-23
Identity = 66/104 (63.46%), Postives = 82/104 (78.85%), Query Frame = 1


Query: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVSSTAVKGGSVAAARSSNLLKKSG 60
           MARS SNAK+ SA + DG S+ ++ RGYAAA  SQGV+S+  K G   A RS+ + KK+G
Sbjct: 1   MARSLSNAKLFSAALVDGISASIARRGYAAA--SQGVASSFAKTG---ATRSTVMSKKTG 60

Query: 61  EEKVGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLNNKN 105
           EEK  +TE+VSWVPDP TGYYRPENR++EIDVAELR++LL NKN
Sbjct: 61  EEKARSTERVSWVPDPKTGYYRPENRAEEIDVAELRAMLLKNKN 99

[Close]

BLAST of CSPI07G17540 vs. TrEMBL
Match: M5VQ69_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013814mg PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-23
Identity = 62/100 (62.00%), Postives = 79/100 (79.00%), Query Frame = 1


Query: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVSSTAVKGGSVAAARSSNLLKKSG 60
           MARSFSNAK+LSA+V+DGFSS ++ RGY  AAGSQGV+S+ V+GG      S N++K SG
Sbjct: 1   MARSFSNAKLLSALVADGFSSTITRRGY--AAGSQGVASSVVRGGGATNPTSVNVVKNSG 60

Query: 61  EEKVGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILL 101
           E+KV +  KVSWVP+P TG+Y PEN ++EID AELR+ LL
Sbjct: 61  EDKVSSASKVSWVPNPKTGFYGPENGAEEIDAAELRAALL 98

[Close]

BLAST of CSPI07G17540 vs. TrEMBL
Match: A0A059AWU9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01103 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 3.8e-23
Identity = 66/104 (63.46%), Postives = 80/104 (76.92%), Query Frame = 1


Query: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVSSTAVKGGSVAAARSSNLLKKSG 60
           MARS SNAK+ SAV+ DG S+  + RGYAAA  SQGV+S+  K G   A RS+ + KK+G
Sbjct: 1   MARSLSNAKLFSAVLVDGISASFARRGYAAA--SQGVASSVAKTG---ATRSAVMSKKTG 60

Query: 61  EEKVGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLNNKN 105
           EE   +TE+VSWVPDP TGYYRPENR++EIDVAELR+ LL NKN
Sbjct: 61  EETARSTERVSWVPDPKTGYYRPENRAEEIDVAELRAALLKNKN 99

[Close]

BLAST of CSPI07G17540 vs. TrEMBL
Match: W9QFH4_9ROSA (Indole-3-acetic acid-induced protein ARG2 OS=Morus notabilis GN=L484_011104 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.5e-22
Identity = 64/100 (64.00%), Postives = 80/100 (80.00%), Query Frame = 1


Query: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVSSTAVKGGSVAAARSSNLLKKSG 60
           MARSFS AK L+A+V DGFS++++ RG++AAA  QGV S+  + G+ A +RS  + KKSG
Sbjct: 1   MARSFSGAKALTALVIDGFSTVITRRGFSAAA-PQGVVSSVARAGATAGSRS--VKKKSG 60

Query: 61  EEKVGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILL 101
           E+ VG TEKVSWVPDPVTGYYRPEN + EIDVAELR+ LL
Sbjct: 61  EKIVGNTEKVSWVPDPVTGYYRPENGAQEIDVAELRATLL 97

[Close]

BLAST of CSPI07G17540 vs. TAIR10
Match: AT4G02380.1 (AT4G02380.1 senescence-associated gene 21)

HSP 1 Score: 94.0 bits (232), Expect = 6.0e-20
Identity = 58/103 (56.31%), Postives = 74/103 (71.84%), Query Frame = 1


Query: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVSSTAVKGGSVAAARSSNLLKKSG 60
           MARS SN KI+SA VS   S+ +  RGYAA A +QG  S+  + G+VA+A    ++KK G
Sbjct: 1   MARSISNVKIVSAFVSRELSNAIFRRGYAATA-AQGSVSSGGRSGAVASA----VMKKKG 60

Query: 61  EEKVGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLNNK 104
            E+  +T+K+SWVPDP TGYYRPE  S+EID AELR+ LLNNK
Sbjct: 61  VEE--STQKISWVPDPKTGYYRPETGSNEIDAAELRAALLNNK 96

[Close]

BLAST of CSPI07G17540 vs. TAIR10
Match: AT1G02820.1 (AT1G02820.1 Late embryogenesis abundant 3 (LEA3) family protein)

HSP 1 Score: 79.7 bits (195), Expect = 1.2e-15
Identity = 54/103 (52.43%), Postives = 68/103 (66.02%), Query Frame = 1


Query: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVSSTAVKGGSVAAARSSNLLKKSG 60
           MARS +NAKI S   S+  S+ +  RG+AAAA       TA+ G SV+ A    + K++G
Sbjct: 1   MARSLANAKIQSVFGSEKLSNAVFRRGFAAAA------KTALDG-SVSTAE---MKKRAG 60

Query: 61  EEKVGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLNNK 104
           E    ++EK  WVPDP TGYYRPE  S+EID AELR+ILLNNK
Sbjct: 61  E---ASSEKAPWVPDPKTGYYRPETVSEEIDPAELRAILLNNK 90

[Close]

BLAST of CSPI07G17540 vs. TAIR10
Match: AT4G15910.1 (AT4G15910.1 drought-induced 21)

HSP 1 Score: 57.8 bits (138), Expect = 4.8e-09
Identity = 45/105 (42.86%), Postives = 59/105 (56.19%), Query Frame = 1


Query: 2   ARSFSNA-KILSAVVSDGFS-SLLSSRGYAAAAGSQGVSSTAV-KGGSVAAARSSNLLKK 61
           ARS S A K L +  S   S S++  R Y A   SQ V++  + KGGS        ++ K
Sbjct: 3   ARSLSGAVKSLCSAASGSLSCSIVLRRSYVAT--SQNVTAAGLSKGGSTRV-----MVGK 62

Query: 62  SGEEKVGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLNNK 104
             +  +    + +W PDPVTGYYRP NR+ EID AELR +LL NK
Sbjct: 63  MEQRGLDQEAESAWGPDPVTGYYRPSNRAAEIDPAELRELLLKNK 100

[Close]

BLAST of CSPI07G17540 vs. TAIR10
Match: AT3G53770.1 (AT3G53770.1 late embryogenesis abundant 3 (LEA3) family protein)

HSP 1 Score: 48.5 bits (114), Expect = 2.9e-06
Identity = 19/34 (55.88%), Postives = 26/34 (76.47%), Query Frame = 1


Query: 68  EKVSWVPDPVTGYYRPENRSDEIDVAELRSILLN 102
           E++ W+PDP TGYYRP+N + E+D  ELRS+  N
Sbjct: 82  EELWWMPDPQTGYYRPDNFARELDAVELRSLHFN 115

[Close]

BLAST of CSPI07G17540 vs. NCBI nr
Match: gi|449436481|ref|XP_004136021.1| (PREDICTED: indole-3-acetic acid-induced protein ARG2 [Cucumis sativus])

HSP 1 Score: 186.0 bits (471), Expect = 3.3e-44
Identity = 101/104 (97.12%), Postives = 103/104 (99.04%), Query Frame = 1


Query: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVSSTAVKGGSVAAARSSNLLKKSG 60
           MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGV+S+AVKGGSVAAARSSNLLKKSG
Sbjct: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVASSAVKGGSVAAARSSNLLKKSG 60

Query: 61  EEKVGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLNNKN 105
           EEKVGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILL NKN
Sbjct: 61  EEKVGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLKNKN 104

[Close]

BLAST of CSPI07G17540 vs. NCBI nr
Match: gi|659101343|ref|XP_008451558.1| (PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Cucumis melo])

HSP 1 Score: 171.4 bits (433), Expect = 8.4e-40
Identity = 95/105 (90.48%), Postives = 99/105 (94.29%), Query Frame = 1


Query: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVSSTAVKGGSVAAARSSNLLKKSG 60
           MARSFSN KILSAVVSDGFSSLL+SRGYAAAAGSQGV+S+AVKG  VAAARSSNLLKKSG
Sbjct: 1   MARSFSNVKILSAVVSDGFSSLLTSRGYAAAAGSQGVASSAVKGAGVAAARSSNLLKKSG 60

Query: 61  EEK-VGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLNNKN 105
           EEK VG+TEKVSWVPDPVTGYYRPENR DEIDVAELRSILL NKN
Sbjct: 61  EEKVVGSTEKVSWVPDPVTGYYRPENRCDEIDVAELRSILLKNKN 105

[Close]

BLAST of CSPI07G17540 vs. NCBI nr
Match: gi|1009174807|ref|XP_015868536.1| (PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Ziziphus jujuba])

HSP 1 Score: 124.0 bits (310), Expect = 1.5e-25
Identity = 69/100 (69.00%), Postives = 83/100 (83.00%), Query Frame = 1


Query: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVSSTAVKGGSVAAARSSNLLKKSG 60
           MARSFSNAK+LSA+V DGFS+ +S RGYAAA  SQGV S+  +GG+  + R  N++KKSG
Sbjct: 1   MARSFSNAKLLSALVVDGFSTAISRRGYAAA--SQGVVSSVARGGAGGSGR--NVVKKSG 60

Query: 61  EEKVGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILL 101
           EE VG+TEKVSW PDPVTGYYRPEN + EIDVAELR++LL
Sbjct: 61  EEIVGSTEKVSWTPDPVTGYYRPENGAQEIDVAELRAMLL 96

[Close]

BLAST of CSPI07G17540 vs. NCBI nr
Match: gi|1009181548|ref|XP_015872231.1| (PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Ziziphus jujuba])

HSP 1 Score: 120.2 bits (300), Expect = 2.2e-24
Identity = 70/104 (67.31%), Postives = 84/104 (80.77%), Query Frame = 1


Query: 1   MARSFSNAKILSAVVSDGFSSLLSS----RGYAAAAGSQGVSSTAVKGGSVAAARSSNLL 60
           MARSFSNAK+LSA+V DGFS+ +SS    RGYAAA  SQGV S+  +GG+  + R  N++
Sbjct: 1   MARSFSNAKLLSALVVDGFSTAISSYNNRRGYAAA--SQGVVSSVARGGAGGSGR--NVV 60

Query: 61  KKSGEEKVGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILL 101
           KKSGEE VG+TEKVSW PDPVTGYYRPEN + EIDVAELR++LL
Sbjct: 61  KKSGEEIVGSTEKVSWTPDPVTGYYRPENGAQEIDVAELRAMLL 100

[Close]

BLAST of CSPI07G17540 vs. NCBI nr
Match: gi|658047466|ref|XP_008359415.1| (PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Malus domestica])

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-23
Identity = 68/101 (67.33%), Postives = 79/101 (78.22%), Query Frame = 1


Query: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVSSTAVKGGSVAAARSSNLLKK-S 60
           MARSFSNAK LSA+V DGFSS +S RGYAA  GSQGV+S+ V+GG  A  RS N+ KK S
Sbjct: 1   MARSFSNAKFLSALVVDGFSSSISRRGYAA--GSQGVASSVVRGGGAATPRSVNVAKKNS 60

Query: 61  GEEKVGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILL 101
           GEEKV +T KVSWVPDP TG Y PEN +++ID AELR+ LL
Sbjct: 61  GEEKVXSTSKVSWVPDPKTGVYGPENGAEKIDAAELRAALL 99

The following BLAST results are available for this feature:

BLAST of CSPI07G17540 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ARG2_VIGRR	1.1e-20	56.31	Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata GN=ARG2 ...	[more]
SAG21_ARATH	1.1e-18	56.31	Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana GN=...	[more]
LEA5_CITSI	2.7e-14	48.54	Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1	[more]
LEA5D_GOSHI	1.1e-10	40.78	Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum GN=LEA5-D PE=2 ...	[more]
LEA5A_GOSHI	5.8e-09	38.83	Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum GN=LEA5-A PE=2 ...	[more]

BLAST of CSPI07G17540 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K996_CUCSA	2.3e-44	97.12	Protein induced upon tuberization OS=Cucumis sativus GN=Csa_7G398090 PE=4 SV=1	[more]
A0A059AX49_EUCGR	1.3e-23	63.46	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01104 PE=4 SV=1	[more]
M5VQ69_PRUPE	2.2e-23	62.00	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013814mg PE=4 SV=1	[more]
A0A059AWU9_EUCGR	3.8e-23	63.46	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01103 PE=4 SV=1	[more]
W9QFH4_9ROSA	2.5e-22	64.00	Indole-3-acetic acid-induced protein ARG2 OS=Morus notabilis GN=L484_011104 PE=4...	[more]

BLAST of CSPI07G17540 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G02380.1	6.0e-20	56.31	senescence-associated gene 21	[more]
AT1G02820.1	1.2e-15	52.43	Late embryogenesis abundant 3 (LEA3) family protein	[more]
AT4G15910.1	4.8e-09	42.86	drought-induced 21	[more]
AT3G53770.1	2.9e-06	55.88	late embryogenesis abundant 3 (LEA3) family protein	[more]

BLAST of CSPI07G17540 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449436481\|ref\|XP_004136021.1\|	3.3e-44	97.12	PREDICTED: indole-3-acetic acid-induced protein ARG2 [Cucumis sativus]	[more]
gi\|659101343\|ref\|XP_008451558.1\|	8.4e-40	90.48	PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Cucumis melo]	[more]
gi\|1009174807\|ref\|XP_015868536.1\|	1.5e-25	69.00	PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Ziziphus jujuba]	[more]
gi\|1009181548\|ref\|XP_015872231.1\|	2.2e-24	67.31	PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Ziziphus jujuba]	[more]
gi\|658047466\|ref\|XP_008359415.1\|	1.1e-23	67.33	PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004926	LEA_3

Vocabulary: **Biological Process**
Term	Definition
GO:0006950	response to stress

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006950	response to stress
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G17540.1	CSPI07G17540.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004926	Late embryogenesis abundant protein, LEA5-type	PFAM	PF03242	LEA_3	coord: 1..100 score: 5.4
None	No IPR available	PANTHER	PTHR33509	FAMILY NOT NAMED	coord: 1..104 score: 2.8
None	No IPR available	PANTHER	PTHR33509:SF5	LATE EMBRYOGENESIS ABUNDANT 3 (LEA3) FAMILY PROTEIN	coord: 1..104 score: 2.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI07G17540	Cla017401	Watermelon (97103) v1	cpiwmB593
CSPI07G17540	Cla015092	Watermelon (97103) v1	cpiwmB578
CSPI07G17540	Csa4G001850	Cucumber (Chinese Long) v2	cpicuB345
CSPI07G17540	Csa7G398090	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G17540	MELO3C015995	Melon (DHL92) v3.5.1	cpimeB540
CSPI07G17540	MELO3C017949	Melon (DHL92) v3.5.1	cpimeB572
CSPI07G17540	ClCG09G005640	Watermelon (Charleston Gray)	cpiwcgB547
CSPI07G17540	ClCG10G011020	Watermelon (Charleston Gray)	cpiwcgB560
CSPI07G17540	Lsi03G010810	Bottle gourd (USVL1VR-Ls)	cpilsiB530
CSPI07G17540	Lsi02G024100	Bottle gourd (USVL1VR-Ls)	cpilsiB517
CSPI07G17540	MELO3C015995.2	Melon (DHL92) v3.6.1	cpimedB525
CSPI07G17540	MELO3C017949.2	Melon (DHL92) v3.6.1	cpimedB557
CSPI07G17540	CsaV3_7G029330	Cucumber (Chinese Long) v3	cpicucB414
CSPI07G17540	CsaV3_4G000870	Cucumber (Chinese Long) v3	cpicucB402
CSPI07G17540	Cla97C10G193930	Watermelon (97103) v2	cpiwmbB541
CSPI07G17540	Cla97C09G168120	Watermelon (97103) v2	cpiwmbB590
CSPI07G17540	Bhi11G001014	Wax gourd	cpiwgoB658
CSPI07G17540	Bhi09G000723	Wax gourd	cpiwgoB703
CSPI07G17540	Cucsa.097030	Cucumber (Gy14) v1	cgycpiB106
CSPI07G17540	Cucsa.205500	Cucumber (Gy14) v1	cgycpiB325
CSPI07G17540	CmaCh17G010820	Cucurbita maxima (Rimu)	cmacpiB392
CSPI07G17540	CmaCh08G004290	Cucurbita maxima (Rimu)	cmacpiB934
CSPI07G17540	CmoCh08G004230	Cucurbita moschata (Rifu)	cmocpiB913
CSPI07G17540	CmoCh17G010560	Cucurbita moschata (Rifu)	cmocpiB381
CSPI07G17540	Cp4.1LG12g05650	Cucurbita pepo (Zucchini)	cpecpiB163
CSPI07G17540	Cp4.1LG17g07170	Cucurbita pepo (Zucchini)	cpecpiB344
CSPI07G17540	CsGy7G015970	Cucumber (Gy14) v2	cgybcpiB331
CSPI07G17540	Carg11140	Silver-seed gourd	carcpiB0855
CSPI07G17540	Carg12096	Silver-seed gourd	carcpiB0599
CSPI07G17540	Carg07167	Silver-seed gourd	carcpiB0124

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CSPI07G17540	CSPI04G00910	Wild cucumber (PI 183967)	cpicpiB167

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G17540	Watermelon (97103) v2	cpiwmbB564
CSPI07G17540	Watermelon (97103) v2	cpiwmbB598
CSPI07G17540	Wax gourd	cpiwgoB666
CSPI07G17540	Watermelon (Charleston Gray)	cpiwcgB555
CSPI07G17540	Watermelon (97103) v1	cpiwmB587