CmaCh17G010820 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G010820
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Late embryogenesis abundant protein 3L-1
Location	Cma_Chr17 : 7665891 .. 7666573 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCGCCTTCCCGCCTACTTCGTCTCTAACCCTGCCAAAACGCCTCTATATAAACCTCCTCTCTTCCACTTCTTCTTCACTCGTCTCCACTTACAAAATAGAAACTGCTCCATTTTTACAAATTCTCTTACAGGTTTCTCTTCCGCTGCTGTGGAGGATTTTCTCGAGAAACAAACAACGTTGAAGAATCTTGTTCCGAGAAGATCTCTCCACCAACAGCGCTTTGAGTTTTTATTGATTTCTTGCTTTTATATTCATCTTCCAATGGCTCGCTCTTTCTCCAACGTTAAGGTCCTATCCGCTATCGTTGCCGATGGATTCTCTTCCGCTCTCAGCAGGTGCTTCTTCTTCTTCTTTTTCTTCCTTATTTCTTGGATCTTTGTCTCGATTGTAGTGTTTTTGATGTTAATATTTGTATGATTGTTTGTATGGTTAGGCGTGGCTACGCGGCGGCGCCGGCTTCGCAAGGAGTTGCATCGAGTGCGGTCAAGGGAGGAAGTGTTGCGGCGGCGAGGAACAGTAATCTGTTGAAGAAATCGGGGGAGGAGAAGGTTGTTGGATCGTCTGAGAAGGTTTCTTGGGTGCCGGATCCTGTCACGGGGTATTACCGGCCGGAGAACCGCGCCGATGAGATAGATGTTGCCGAACTTCGTTCGGTTCTCCTTAATAACAGGAATTAA

mRNA sequence

ATGCCTCGCCTTCCCGCCTACTTCGTCTCTAACCCTGCCAAAACGCCTCTATATAAACCTCCTCTCTTCCACTTCTTCTTCACTCGTCTCCACTTACAAAATAGAAACTGCTCCATTTTTACAAATTCTCTTACAGGTTTCTCTTCCGCTGCTGTGGAGGATTTTCTCGAGAAACAAACAACGTTGAAGAATCTTGTTCCGAGAAGATCTCTCCACCAACAGCGCTTTGAGTTTTTATTGATTTCTTGCTTTTATATTCATCTTCCAATGGCTCGCTCTTTCTCCAACGTTAAGGTCCTATCCGCTATCGTTGCCGATGGATTCTCTTCCGCTCTCAGCAGGCGTGGCTACGCGGCGGCGCCGGCTTCGCAAGGAGTTGCATCGAGTGCGGTCAAGGGAGGAAGTGTTGCGGCGGCGAGGAACAGTAATCTGTTGAAGAAATCGGGGGAGGAGAAGGTTGTTGGATCGTCTGAGAAGGTTTCTTGGGTGCCGGATCCTGTCACGGGGTATTACCGGCCGGAGAACCGCGCCGATGAGATAGATGTTGCCGAACTTCGTTCGGTTCTCCTTAATAACAGGAATTAA

Coding sequence (CDS)

ATGCCTCGCCTTCCCGCCTACTTCGTCTCTAACCCTGCCAAAACGCCTCTATATAAACCTCCTCTCTTCCACTTCTTCTTCACTCGTCTCCACTTACAAAATAGAAACTGCTCCATTTTTACAAATTCTCTTACAGGTTTCTCTTCCGCTGCTGTGGAGGATTTTCTCGAGAAACAAACAACGTTGAAGAATCTTGTTCCGAGAAGATCTCTCCACCAACAGCGCTTTGAGTTTTTATTGATTTCTTGCTTTTATATTCATCTTCCAATGGCTCGCTCTTTCTCCAACGTTAAGGTCCTATCCGCTATCGTTGCCGATGGATTCTCTTCCGCTCTCAGCAGGCGTGGCTACGCGGCGGCGCCGGCTTCGCAAGGAGTTGCATCGAGTGCGGTCAAGGGAGGAAGTGTTGCGGCGGCGAGGAACAGTAATCTGTTGAAGAAATCGGGGGAGGAGAAGGTTGTTGGATCGTCTGAGAAGGTTTCTTGGGTGCCGGATCCTGTCACGGGGTATTACCGGCCGGAGAACCGCGCCGATGAGATAGATGTTGCCGAACTTCGTTCGGTTCTCCTTAATAACAGGAATTAA

Protein sequence

MPRLPAYFVSNPAKTPLYKPPLFHFFFTRLHLQNRNCSIFTNSLTGFSSAAVEDFLEKQTTLKNLVPRRSLHQQRFEFLLISCFYIHLPMARSFSNVKVLSAIVADGFSSALSRRGYAAAPASQGVASSAVKGGSVAAARNSNLLKKSGEEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNRN

Homology

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BLAST of CmaCh17G010820 vs. Swiss-Prot
Match: ARG2_VIGRR (Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata GN=ARG2 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 5.0e-22
Identity = 63/104 (60.58%), Postives = 79/104 (75.96%), Query Frame = 1


Query: 90  MARSFSNVKVLSAIVADGFSSALSRRGYAAAPASQGVASSAVKGGSVAAARNSNLLKKSG 149
           MARSF+NVKVLSA+VADGFS+  +R G+AAA A+     SA +GG   A+   N++ KSG
Sbjct: 1   MARSFTNVKVLSALVADGFSNTTTRHGFAAAAAA---TQSATRGG---ASIGGNMVPKSG 60

Query: 150 EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNR 194
           EEKV G  EKVSWVPDPVTGYYRPEN  +EIDVA++R+ +L  +
Sbjct: 61  EEKVRG-GEKVSWVPDPVTGYYRPEN-TNEIDVADMRATVLGKK 96

[Close]

BLAST of CmaCh17G010820 vs. Swiss-Prot
Match: SAG21_ARATH (Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana GN=SAG21 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.0e-19
Identity = 58/104 (55.77%), Postives = 77/104 (74.04%), Query Frame = 1


Query: 90  MARSFSNVKVLSAIVADGFSSALSRRGYAAAPASQGVASSAVKGGSVAAARNSNLLKKSG 149
           MARS SNVK++SA V+   S+A+ RRGYAA  A+QG  SS  + G+VA+A    ++KK G
Sbjct: 1   MARSISNVKIVSAFVSRELSNAIFRRGYAAT-AAQGSVSSGGRSGAVASA----VMKKKG 60

Query: 150 EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNR 194
            E+   S++K+SWVPDP TGYYRPE  ++EID AELR+ LLNN+
Sbjct: 61  VEE---STQKISWVPDPKTGYYRPETGSNEIDAAELRAALLNNK 96

[Close]

BLAST of CmaCh17G010820 vs. Swiss-Prot
Match: LEA5D_GOSHI (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum GN=LEA5-D PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.0e-14
Identity = 49/104 (47.12%), Postives = 61/104 (58.65%), Query Frame = 1


Query: 90  MARSFSNVKVLSAIVADGFSSALSRRGYAAAPASQGVASSAVKGGSVAAARNSNLLKKSG 149
           MARS S+ K+L A + DG   ++SRRGY+ AP +   AS    G      R   + + S 
Sbjct: 1   MARSVSSFKLLGASIFDGLYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRDAMKESSS 60

Query: 150 EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNR 194
            E    SS   +W PDPVTGYYRPEN   EID AELR +LLN+R
Sbjct: 61  SETRAYSS---AWAPDPVTGYYRPENCGAEIDAAELREMLLNHR 101

[Close]

BLAST of CmaCh17G010820 vs. Swiss-Prot
Match: LEA5_CITSI (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.5e-13
Identity = 49/104 (47.12%), Postives = 63/104 (60.58%), Query Frame = 1


Query: 90  MARSFSNVKVLSAIVADGFSSALSRRGYAAAPASQGVASSAVKGGSVAAARNSNLLKKSG 149
           MARS    K+L A VADG S ++SRRGYAAA     ++ + +           N L+ + 
Sbjct: 1   MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLGTISRTGIM--------EKNDLRPAV 60

Query: 150 EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNR 194
            E    SS   +W PDP+TGYYRPENRA EID AELR +LLN++
Sbjct: 61  REDSGASS---AWAPDPITGYYRPENRAVEIDPAELREMLLNHK 93

[Close]

BLAST of CmaCh17G010820 vs. Swiss-Prot
Match: LEA5A_GOSHI (Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum GN=LEA5-A PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.1e-12
Identity = 47/104 (45.19%), Postives = 59/104 (56.73%), Query Frame = 1


Query: 90  MARSFSNVKVLSAIVADGFSSALSRRGYAAAPASQGVASSAVKGGSVAAARNSNLLKKSG 149
           MARS S+ K L A V D    ++SRRGY+ AP +   AS    G      R   + + S 
Sbjct: 1   MARSVSSFKFLGASVFDALYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRYAMKESSS 60

Query: 150 EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNR 194
            E    SS   +W PDPVTGYYRPEN   EID A+LR ++LN+R
Sbjct: 61  SETRAYSS---AWAPDPVTGYYRPENCGAEIDAADLREMMLNHR 101

[Close]

BLAST of CmaCh17G010820 vs. TrEMBL
Match: A0A0A0K996_CUCSA (Protein induced upon tuberization OS=Cucumis sativus GN=Csa_7G398090 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.5e-38
Identity = 89/105 (84.76%), Postives = 98/105 (93.33%), Query Frame = 1


Query: 90  MARSFSNVKVLSAIVADGFSSALSRRGYAAAPASQGVASSAVKGGSVAAARNSNLLKKSG 149
           MARSFSN K+LSA+V+DGFSS LS RGYAAA  SQGVASSAVKGGSVAAAR+SNLLKKSG
Sbjct: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVASSAVKGGSVAAARSSNLLKKSG 60

Query: 150 EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNRN 195
           EEK VG++EKVSWVPDPVTGYYRPENR+DEIDVAELRS+LL N+N
Sbjct: 61  EEK-VGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLKNKN 104

[Close]

BLAST of CmaCh17G010820 vs. TrEMBL
Match: M5VQ69_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013814mg PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.1e-23
Identity = 65/101 (64.36%), Postives = 79/101 (78.22%), Query Frame = 1


Query: 90  MARSFSNVKVLSAIVADGFSSALSRRGYAAAPASQGVASSAVKGGSVAAARNSNLLKKSG 149
           MARSFSN K+LSA+VADGFSS ++RRGYAA   SQGVASS V+GG      + N++K SG
Sbjct: 1   MARSFSNAKLLSALVADGFSSTITRRGYAAG--SQGVASSVVRGGGATNPTSVNVVKNSG 60

Query: 150 EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLL 191
           E+KV  S+ KVSWVP+P TG+Y PEN A+EID AELR+ LL
Sbjct: 61  EDKV-SSASKVSWVPNPKTGFYGPENGAEEIDAAELRAALL 98

[Close]

BLAST of CmaCh17G010820 vs. TrEMBL
Match: W9QFH4_9ROSA (Indole-3-acetic acid-induced protein ARG2 OS=Morus notabilis GN=L484_011104 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.4e-23
Identity = 63/101 (62.38%), Postives = 79/101 (78.22%), Query Frame = 1


Query: 90  MARSFSNVKVLSAIVADGFSSALSRRGYAAAPASQGVASSAVKGGSVAAARNSNLLKKSG 149
           MARSFS  K L+A+V DGFS+ ++RRG++AA A QGV SS  + G+ A +R+   +KK  
Sbjct: 1   MARSFSGAKALTALVIDGFSTVITRRGFSAA-APQGVVSSVARAGATAGSRS---VKKKS 60

Query: 150 EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLL 191
            EK+VG++EKVSWVPDPVTGYYRPEN A EIDVAELR+ LL
Sbjct: 61  GEKIVGNTEKVSWVPDPVTGYYRPENGAQEIDVAELRATLL 97

[Close]

BLAST of CmaCh17G010820 vs. TrEMBL
Match: A0A059AX49_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01104 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.0e-23
Identity = 67/105 (63.81%), Postives = 83/105 (79.05%), Query Frame = 1


Query: 90  MARSFSNVKVLSAIVADGFSSALSRRGYAAAPASQGVASSAVKGGSVAAARNSNLLKKSG 149
           MARS SN K+ SA + DG S++++RRGYAAA  SQGVASS  K G   A R++ + KK+G
Sbjct: 1   MARSLSNAKLFSAALVDGISASIARRGYAAA--SQGVASSFAKTG---ATRSTVMSKKTG 60

Query: 150 EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNRN 195
           EEK   S+E+VSWVPDP TGYYRPENRA+EIDVAELR++LL N+N
Sbjct: 61  EEKA-RSTERVSWVPDPKTGYYRPENRAEEIDVAELRAMLLKNKN 99

[Close]

BLAST of CmaCh17G010820 vs. TrEMBL
Match: A0A059AWU9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01103 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 9.2e-23
Identity = 66/105 (62.86%), Postives = 81/105 (77.14%), Query Frame = 1


Query: 90  MARSFSNVKVLSAIVADGFSSALSRRGYAAAPASQGVASSAVKGGSVAAARNSNLLKKSG 149
           MARS SN K+ SA++ DG S++ +RRGYAAA  SQGVASS  K G   A R++ + KK+G
Sbjct: 1   MARSLSNAKLFSAVLVDGISASFARRGYAAA--SQGVASSVAKTG---ATRSAVMSKKTG 60

Query: 150 EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNRN 195
           EE    S+E+VSWVPDP TGYYRPENRA+EIDVAELR+ LL N+N
Sbjct: 61  EE-TARSTERVSWVPDPKTGYYRPENRAEEIDVAELRAALLKNKN 99

[Close]

BLAST of CmaCh17G010820 vs. TAIR10
Match: AT4G02380.1 (AT4G02380.1 senescence-associated gene 21)

HSP 1 Score: 98.2 bits (243), Expect = 5.9e-21
Identity = 58/104 (55.77%), Postives = 77/104 (74.04%), Query Frame = 1


Query: 90  MARSFSNVKVLSAIVADGFSSALSRRGYAAAPASQGVASSAVKGGSVAAARNSNLLKKSG 149
           MARS SNVK++SA V+   S+A+ RRGYAA  A+QG  SS  + G+VA+A    ++KK G
Sbjct: 1   MARSISNVKIVSAFVSRELSNAIFRRGYAAT-AAQGSVSSGGRSGAVASA----VMKKKG 60

Query: 150 EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNR 194
            E+   S++K+SWVPDP TGYYRPE  ++EID AELR+ LLNN+
Sbjct: 61  VEE---STQKISWVPDPKTGYYRPETGSNEIDAAELRAALLNNK 96

[Close]

BLAST of CmaCh17G010820 vs. TAIR10
Match: AT1G02820.1 (AT1G02820.1 Late embryogenesis abundant 3 (LEA3) family protein)

HSP 1 Score: 79.0 bits (193), Expect = 3.7e-15
Identity = 51/104 (49.04%), Postives = 69/104 (66.35%), Query Frame = 1


Query: 90  MARSFSNVKVLSAIVADGFSSALSRRGYAAAPASQGVASSAVKGGSVAAARNSNLLKKSG 149
           MARS +N K+ S   ++  S+A+ RRG+AAA      A +A+ G SV+ A    + K++G
Sbjct: 1   MARSLANAKIQSVFGSEKLSNAVFRRGFAAA------AKTALDG-SVSTAE---MKKRAG 60

Query: 150 EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNR 194
           E     SSEK  WVPDP TGYYRPE  ++EID AELR++LLNN+
Sbjct: 61  E----ASSEKAPWVPDPKTGYYRPETVSEEIDPAELRAILLNNK 90

[Close]

BLAST of CmaCh17G010820 vs. TAIR10
Match: AT4G15910.1 (AT4G15910.1 drought-induced 21)

HSP 1 Score: 58.5 bits (140), Expect = 5.2e-09
Identity = 45/106 (42.45%), Postives = 61/106 (57.55%), Query Frame = 1


Query: 91  ARSFSN-VKVLSAIVADGFS-SALSRRGYAAAPASQGVASSAV-KGGSVAAARNSNLLKK 150
           ARS S  VK L +  +   S S + RR Y A   SQ V ++ + KGGS      + ++  
Sbjct: 3   ARSLSGAVKSLCSAASGSLSCSIVLRRSYVAT--SQNVTAAGLSKGGS------TRVMVG 62

Query: 151 SGEEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNR 194
             E++ +    + +W PDPVTGYYRP NRA EID AELR +LL N+
Sbjct: 63  KMEQRGLDQEAESAWGPDPVTGYYRPSNRAAEIDPAELRELLLKNK 100

[Close]

BLAST of CmaCh17G010820 vs. TAIR10
Match: AT3G53770.1 (AT3G53770.1 late embryogenesis abundant 3 (LEA3) family protein)

HSP 1 Score: 48.5 bits (114), Expect = 5.3e-06
Identity = 20/34 (58.82%), Postives = 26/34 (76.47%), Query Frame = 1


Query: 158 EKVSWVPDPVTGYYRPENRADEIDVAELRSVLLN 192
           E++ W+PDP TGYYRP+N A E+D  ELRS+  N
Sbjct: 82  EELWWMPDPQTGYYRPDNFARELDAVELRSLHFN 115

[Close]

BLAST of CmaCh17G010820 vs. NCBI nr
Match: gi|659101343|ref|XP_008451558.1| (PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Cucumis melo])

HSP 1 Score: 169.5 bits (428), Expect = 5.9e-39
Identity = 89/105 (84.76%), Postives = 97/105 (92.38%), Query Frame = 1


Query: 90  MARSFSNVKVLSAIVADGFSSALSRRGYAAAPASQGVASSAVKGGSVAAARNSNLLKKSG 149
           MARSFSNVK+LSA+V+DGFSS L+ RGYAAA  SQGVASSAVKG  VAAAR+SNLLKKSG
Sbjct: 1   MARSFSNVKILSAVVSDGFSSLLTSRGYAAAAGSQGVASSAVKGAGVAAARSSNLLKKSG 60

Query: 150 EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNRN 195
           EEKVVGS+EKVSWVPDPVTGYYRPENR DEIDVAELRS+LL N+N
Sbjct: 61  EEKVVGSTEKVSWVPDPVTGYYRPENRCDEIDVAELRSILLKNKN 105

[Close]

BLAST of CmaCh17G010820 vs. NCBI nr
Match: gi|449436481|ref|XP_004136021.1| (PREDICTED: indole-3-acetic acid-induced protein ARG2 [Cucumis sativus])

HSP 1 Score: 166.0 bits (419), Expect = 6.5e-38
Identity = 89/105 (84.76%), Postives = 98/105 (93.33%), Query Frame = 1


Query: 90  MARSFSNVKVLSAIVADGFSSALSRRGYAAAPASQGVASSAVKGGSVAAARNSNLLKKSG 149
           MARSFSN K+LSA+V+DGFSS LS RGYAAA  SQGVASSAVKGGSVAAAR+SNLLKKSG
Sbjct: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVASSAVKGGSVAAARSSNLLKKSG 60

Query: 150 EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNRN 195
           EEK VG++EKVSWVPDPVTGYYRPENR+DEIDVAELRS+LL N+N
Sbjct: 61  EEK-VGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLKNKN 104

[Close]

BLAST of CmaCh17G010820 vs. NCBI nr
Match: gi|1009174807|ref|XP_015868536.1| (PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Ziziphus jujuba])

HSP 1 Score: 127.1 bits (318), Expect = 3.3e-26
Identity = 71/101 (70.30%), Postives = 85/101 (84.16%), Query Frame = 1


Query: 90  MARSFSNVKVLSAIVADGFSSALSRRGYAAAPASQGVASSAVKGGSVAAARNSNLLKKSG 149
           MARSFSN K+LSA+V DGFS+A+SRRGYAAA  SQGV SS  +GG+  + RN  ++KKSG
Sbjct: 1   MARSFSNAKLLSALVVDGFSTAISRRGYAAA--SQGVVSSVARGGAGGSGRN--VVKKSG 60

Query: 150 EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLL 191
            E++VGS+EKVSW PDPVTGYYRPEN A EIDVAELR++LL
Sbjct: 61  -EEIVGSTEKVSWTPDPVTGYYRPENGAQEIDVAELRAMLL 96

[Close]

BLAST of CmaCh17G010820 vs. NCBI nr
Match: gi|1009181548|ref|XP_015872231.1| (PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Ziziphus jujuba])

HSP 1 Score: 121.3 bits (303), Expect = 1.8e-24
Identity = 71/105 (67.62%), Postives = 85/105 (80.95%), Query Frame = 1


Query: 90  MARSFSNVKVLSAIVADGFSSALS----RRGYAAAPASQGVASSAVKGGSVAAARNSNLL 149
           MARSFSN K+LSA+V DGFS+A+S    RRGYAAA  SQGV SS  +GG+  + RN  ++
Sbjct: 1   MARSFSNAKLLSALVVDGFSTAISSYNNRRGYAAA--SQGVVSSVARGGAGGSGRN--VV 60

Query: 150 KKSGEEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLL 191
           KKSG E++VGS+EKVSW PDPVTGYYRPEN A EIDVAELR++LL
Sbjct: 61  KKSG-EEIVGSTEKVSWTPDPVTGYYRPENGAQEIDVAELRAMLL 100

[Close]

BLAST of CmaCh17G010820 vs. NCBI nr
Match: gi|658047466|ref|XP_008359415.1| (PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Malus domestica])

HSP 1 Score: 117.5 bits (293), Expect = 2.7e-23
Identity = 65/101 (64.36%), Postives = 77/101 (76.24%), Query Frame = 1


Query: 90  MARSFSNVKVLSAIVADGFSSALSRRGYAAAPASQGVASSAVKGGSVAAARNSNLLKKSG 149
           MARSFSN K LSA+V DGFSS++SRRGYAA   SQGVASS V+GG  A  R+ N+ KK+ 
Sbjct: 1   MARSFSNAKFLSALVVDGFSSSISRRGYAAG--SQGVASSVVRGGGAATPRSVNVAKKNS 60

Query: 150 EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLL 191
            E+ V S+ KVSWVPDP TG Y PEN A++ID AELR+ LL
Sbjct: 61  GEEKVXSTSKVSWVPDPKTGVYGPENGAEKIDAAELRAALL 99

The following BLAST results are available for this feature:

BLAST of CmaCh17G010820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ARG2_VIGRR	5.0e-22	60.58	Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata GN=ARG2 ...	[more]
SAG21_ARATH	1.0e-19	55.77	Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana GN=...	[more]
LEA5D_GOSHI	5.0e-14	47.12	Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum GN=LEA5-D PE=2 ...	[more]
LEA5_CITSI	2.5e-13	47.12	Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1	[more]
LEA5A_GOSHI	2.1e-12	45.19	Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum GN=LEA5-A PE=2 ...	[more]

BLAST of CmaCh17G010820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K996_CUCSA	4.5e-38	84.76	Protein induced upon tuberization OS=Cucumis sativus GN=Csa_7G398090 PE=4 SV=1	[more]
M5VQ69_PRUPE	4.1e-23	64.36	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013814mg PE=4 SV=1	[more]
W9QFH4_9ROSA	5.4e-23	62.38	Indole-3-acetic acid-induced protein ARG2 OS=Morus notabilis GN=L484_011104 PE=4...	[more]
A0A059AX49_EUCGR	7.0e-23	63.81	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01104 PE=4 SV=1	[more]
A0A059AWU9_EUCGR	9.2e-23	62.86	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01103 PE=4 SV=1	[more]

BLAST of CmaCh17G010820 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G02380.1	5.9e-21	55.77	senescence-associated gene 21	[more]
AT1G02820.1	3.7e-15	49.04	Late embryogenesis abundant 3 (LEA3) family protein	[more]
AT4G15910.1	5.2e-09	42.45	drought-induced 21	[more]
AT3G53770.1	5.3e-06	58.82	late embryogenesis abundant 3 (LEA3) family protein	[more]

BLAST of CmaCh17G010820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659101343\|ref\|XP_008451558.1\|	5.9e-39	84.76	PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Cucumis melo]	[more]
gi\|449436481\|ref\|XP_004136021.1\|	6.5e-38	84.76	PREDICTED: indole-3-acetic acid-induced protein ARG2 [Cucumis sativus]	[more]
gi\|1009174807\|ref\|XP_015868536.1\|	3.3e-26	70.30	PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Ziziphus jujuba]	[more]
gi\|1009181548\|ref\|XP_015872231.1\|	1.8e-24	67.62	PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Ziziphus jujuba]	[more]
gi\|658047466\|ref\|XP_008359415.1\|	2.7e-23	64.36	PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004926	LEA_3

Vocabulary: **Biological Process**
Term	Definition
GO:0006950	response to stress

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006950	response to stress
biological_process	GO:0071229	cellular response to acid chemical
biological_process	GO:0071310	cellular response to organic substance
biological_process	GO:1901701	cellular response to oxygen-containing compound
biological_process	GO:0033554	cellular response to stress
biological_process	GO:0006952	defense response
biological_process	GO:0009605	response to external stimulus
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G010820.1	CmaCh17G010820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004926	Late embryogenesis abundant protein, LEA5-type	PFAM	PF03242	LEA_3	coord: 90..190 score: 4.1
None	No IPR available	PANTHER	PTHR33509	FAMILY NOT NAMED	coord: 77..194 score: 4.6
None	No IPR available	PANTHER	PTHR33509:SF5	LATE EMBRYOGENESIS ABUNDANT 3 (LEA3) FAMILY PROTEIN	coord: 77..194 score: 4.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh17G010820	Cucsa.097030	Cucumber (Gy14) v1	cgycmaB0198
CmaCh17G010820	Cucsa.205500	Cucumber (Gy14) v1	cgycmaB0606
CmaCh17G010820	Cla017401	Watermelon (97103) v1	cmawmB336
CmaCh17G010820	Cla015092	Watermelon (97103) v1	cmawmB334
CmaCh17G010820	Csa7G398090	Cucumber (Chinese Long) v2	cmacuB388
CmaCh17G010820	Csa4G001850	Cucumber (Chinese Long) v2	cmacuB365
CmaCh17G010820	MELO3C017949	Melon (DHL92) v3.5.1	cmameB347
CmaCh17G010820	MELO3C015995	Melon (DHL92) v3.5.1	cmameB320
CmaCh17G010820	ClCG09G005640	Watermelon (Charleston Gray)	cmawcgB311
CmaCh17G010820	ClCG10G011020	Watermelon (Charleston Gray)	cmawcgB314
CmaCh17G010820	CSPI04G00910	Wild cucumber (PI 183967)	cmacpiB369
CmaCh17G010820	CSPI07G17540	Wild cucumber (PI 183967)	cmacpiB392
CmaCh17G010820	CmoCh01G003190	Cucurbita moschata (Rifu)	cmacmoB354
CmaCh17G010820	CmoCh17G010560	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G010820	CmoCh08G004230	Cucurbita moschata (Rifu)	cmacmoB374
CmaCh17G010820	Lsi02G024100	Bottle gourd (USVL1VR-Ls)	cmalsiB348
CmaCh17G010820	Cp4.1LG12g05650	Cucurbita pepo (Zucchini)	cmacpeB371
CmaCh17G010820	Cp4.1LG17g07170	Cucurbita pepo (Zucchini)	cmacpeB376
CmaCh17G010820	MELO3C015995.2	Melon (DHL92) v3.6.1	cmamedB373
CmaCh17G010820	MELO3C017949.2	Melon (DHL92) v3.6.1	cmamedB401
CmaCh17G010820	CsaV3_7G029330	Cucumber (Chinese Long) v3	cmacucB0462
CmaCh17G010820	CsaV3_4G000870	Cucumber (Chinese Long) v3	cmacucB0437
CmaCh17G010820	Cla97C09G168120	Watermelon (97103) v2	cmawmbB393
CmaCh17G010820	Bhi09G000723	Wax gourd	cmawgoB0494
CmaCh17G010820	Bhi11G001014	Wax gourd	cmawgoB0454
CmaCh17G010820	CsGy7G015970	Cucumber (Gy14) v2	cgybcmaB925
CmaCh17G010820	Carg07399	Silver-seed gourd	carcmaB1058
CmaCh17G010820	Carg12096	Silver-seed gourd	carcmaB0787
CmaCh17G010820	Carg07167	Silver-seed gourd	carcmaB0142
CmaCh17G010820	Carg11140	Silver-seed gourd	carcmaB1133

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh17G010820	CmaCh14G009090	Cucurbita maxima (Rimu)	cmacmaB250
CmaCh17G010820	CmaCh01G003060	Cucurbita maxima (Rimu)	cmacmaB360
CmaCh17G010820	CmaCh08G004290	Cucurbita maxima (Rimu)	cmacmaB382

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G010820	Cucurbita moschata (Rifu)	cmacmoB351
CmaCh17G010820	Wild cucumber (PI 183967)	cmacpiB367
CmaCh17G010820	Cucumber (Chinese Long) v2	cmacuB363
CmaCh17G010820	Watermelon (Charleston Gray)	cmawcgB306
CmaCh17G010820	Watermelon (97103) v1	cmawmB345
CmaCh17G010820	Watermelon (97103) v1	cmawmB328
CmaCh17G010820	Cucurbita pepo (Zucchini)	cmacpeB410
CmaCh17G010820	Bottle gourd (USVL1VR-Ls)	cmalsiB351
CmaCh17G010820	Melon (DHL92) v3.6.1	cmamedB400
CmaCh17G010820	Watermelon (97103) v2	cmawmbB360
CmaCh17G010820	Watermelon (97103) v2	cmawmbB368
CmaCh17G010820	Watermelon (97103) v2	cmawmbB386
CmaCh17G010820	Wax gourd	cmawgoB0478
CmaCh17G010820	Cucumber (Gy14) v1	cgycmaB0713